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##fileformat=VCFv4.2
##FILTER=<ID=PASS,Description="All filters passed">
##contig=<ID=chr16,length=150>
##ALT=<ID=*,Description="Represents allele(s) other than observed.">
##INFO=<ID=INDEL,Number=0,Type=Flag,Description="Indicates that the variant is an INDEL.">
##INFO=<ID=IDV,Number=1,Type=Integer,Description="Maximum number of raw reads supporting an indel">
##INFO=<ID=IMF,Number=1,Type=Float,Description="Maximum fraction of raw reads supporting an indel">
##INFO=<ID=DP,Number=1,Type=Integer,Description="Raw read depth">
##INFO=<ID=VDB,Number=1,Type=Float,Description="Variant Distance Bias for filtering splice-site artefacts in RNA-seq data (bigger is better)",Version="3">
##INFO=<ID=RPBZ,Number=1,Type=Float,Description="Mann-Whitney U-z test of Read Position Bias (closer to 0 is better)">
##INFO=<ID=MQBZ,Number=1,Type=Float,Description="Mann-Whitney U-z test of Mapping Quality Bias (closer to 0 is better)">
##INFO=<ID=BQBZ,Number=1,Type=Float,Description="Mann-Whitney U-z test of Base Quality Bias (closer to 0 is better)">
##INFO=<ID=MQSBZ,Number=1,Type=Float,Description="Mann-Whitney U-z test of Mapping Quality vs Strand Bias (closer to 0 is better)">
##INFO=<ID=NMBZ,Number=1,Type=Float,Description="Mann-Whitney U-z test of Number of Mismatches within supporting reads (closer to 0 is better; approximate, experimental, make me localized?)">
##INFO=<ID=SCBZ,Number=1,Type=Float,Description="Mann-Whitney U-z test of Soft-Clip Length Bias (closer to 0 is better)">
##INFO=<ID=SGB,Number=1,Type=Float,Description="Segregation based metric, http://samtools.github.io/bcftools/rd-SegBias.pdf">
##INFO=<ID=MQ0F,Number=1,Type=Float,Description="Fraction of MQ0 reads (smaller is better)">
##INFO=<ID=I16,Number=16,Type=Float,Description="Auxiliary tag used for calling, see description of bcf_callret1_t in bam2bcf.h">
##INFO=<ID=QS,Number=R,Type=Float,Description="Auxiliary tag used for calling">
##FORMAT=<ID=PL,Number=G,Type=Integer,Description="List of Phred-scaled genotype likelihoods">
#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT sample sample2
chr16 75 . C T,<*> 0 . DP=246;I16=114,125,1,0,8929,339403,8,64,14340,860400,40,1600,3901,80155,11,121;QS=1.99845,0.00154859,0;SGB=-0.516033;RPBZ=-1.14044;MQBZ=-15.4596;MQSBZ=1.04257;BQBZ=-1.74564;NMBZ=7.74597;SCBZ=10.8628;MQ0F=0 PL 0,255,255,255,255,255 0,255,255,255,255,255
chr16 75 . CTTTTTTTT CTTTTTTTTT,CTTTTTTTTTT 0 . INDEL;IDV=38;IMF=0.368932;DP=246;I16=92,109,23,16,8040,321600,1580,64400,12040,721600,2340,140400,3237,66777,675,13499;QS=1.43466,0.548367,0.0169779;VDB=0.506381;SGB=-13.9289;RPBZ=-1.68678;MQBZ=0.434057;MQSBZ=1.04257;BQBZ=-1.74564;NMBZ=-0.886523;SCBZ=-0.615101;MQ0F=0 PL 255,0,116,255,195,255 0,255,198,255,201,210
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