1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
|
##fileformat=VCFv4.2
##FILTER=<ID=PASS,Description="All filters passed">
##contig=<ID=11,length=2147483647>
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=FL,Number=1,Type=Float,Description="Float">
##FORMAT=<ID=FLG,Number=G,Type=Float,Description="FloatG">
##FORMAT=<ID=FLA,Number=A,Type=Float,Description="FloatA">
##FORMAT=<ID=FLR,Number=R,Type=Float,Description="FloatR">
##FORMAT=<ID=INT,Number=1,Type=Float,Description="Int">
##FORMAT=<ID=INTG,Number=G,Type=Float,Description="IntG">
##FORMAT=<ID=INTA,Number=A,Type=Integer,Description="IntA">
##FORMAT=<ID=INTR,Number=R,Type=Integer,Description="IntR">
##FORMAT=<ID=ST,Number=1,Type=String,Description="String">
##FORMAT=<ID=STA,Number=A,Type=String,Description="StringA">
##FORMAT=<ID=STR,Number=R,Type=String,Description="StringR">
##FORMAT=<ID=STG,Number=G,Type=String,Description="StringG">
##INFO=<ID=FL,Number=1,Type=Float,Description="Float">
##INFO=<ID=FLG,Number=G,Type=Float,Description="FloatG">
##INFO=<ID=FLA,Number=A,Type=Float,Description="FloatA">
##INFO=<ID=FLR,Number=R,Type=Float,Description="FloatR">
##INFO=<ID=INT,Number=1,Type=Float,Description="Int">
##INFO=<ID=INTG,Number=G,Type=Float,Description="IntG">
##INFO=<ID=INTA,Number=A,Type=Integer,Description="IntA">
##INFO=<ID=INTR,Number=R,Type=Integer,Description="IntR">
##INFO=<ID=F1,Type=Flag,Description="Flag1">
##INFO=<ID=ST,Number=1,Type=String,Description="String">
##INFO=<ID=STA,Number=A,Type=String,Description="StringA">
##INFO=<ID=STR,Number=R,Type=String,Description="StringR">
##INFO=<ID=STG,Number=G,Type=String,Description="StringG">
#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT sample_1 sample_2
11 48245184 . C G . PASS FL=0.34;FLG=0.1,0,0.9;FLA=88.4;FLR=99,88.4;INT=0;INTG=0,1,9;INTA=88;INTR=99,88;F1;ST=alpha;STA=alpha;STR=alpha,beta;STG=alpha,beta,gamma GT:FL:FLG:FLA:FLR:INT:INTG:INTA:INTR:ST:STA:STR:STG 0|0:0.34:0.1,0,0.9:88.4:99,88.4:0:0,1,9:88:99,88:alpha:alpha:alpha,beta:alpha,beta,gamma 0|0:0.34:0.1,0,0.9:88.4:99,88.4:0:0,1,9:88:99,88:alpha:alpha:alpha,beta:alpha,beta,gamma
11 48245185 . C G,T . PASS FL=0.34;FLG=0.1,0,0.9,.,.,.;FLA=88.4,.;FLR=99,88.4,.;INT=0;INTG=0,1,9,.,.,.;INTA=88,.;INTR=99,88,.;F1;ST=alpha;STA=alpha,.;STR=alpha,beta,.;STG=alpha,beta,gamma,.,.,. GT:FL:FLG:FLA:FLR:INT:INTG:INTA:INTR:ST:STA:STR:STG 0|0:0.34:0.1,0,0.9,.,.,.:88.4,.:99,88.4,.:0:0,1,9,.,.,.:88,.:99,88,.:alpha:alpha,.:alpha,beta,.:alpha,beta,gamma,.,.,. 0|0:0.34:0.1,0,0.9,.,.,.:88.4,.:99,88.4,.:0:0,1,9,.,.,.:88,.:99,88,.:alpha:alpha,.:alpha,beta,.:alpha,beta,gamma,.,.,.
11 48245186 . C G,T . PASS FL=0.34;FLA=88.4,88.4;FLR=99,88.4,88.4;INT=0;INTA=88,11;INTR=99,88,11;F1;ST=alpha;STA=alpha,beta;STR=alpha,beta,gamma GT:FL:FLA:FLR:INT:INTA:INTR:ST:STA:STR 0|0:0.34:88.4,11:99,88.4,11:0:88,11:99,88,11:alpha:alpha,beta:alpha,beta,gamma 0|0:0.34:88.4,11:99,88.4,11:0:88,11:99,88,11:alpha:alpha,beta:alpha,beta,gamma
11 48245187 . C G,T . PASS FL=0.34;FLA=88.4,.;FLR=99,88.4,.;INT=0;INTA=88,.;INTR=99,88,.;F1;ST=alpha;STA=alpha,.;STR=alpha,beta,. GT:FL:FLG:FLA:FLR:INT:INTG:INTA:INTR:ST:STA:STR:STG 0:0.34:0.1,0,.:88.4,.:99,88.4,.:0:0,1,.:88,.:99,88,.:alpha:alpha,.:alpha,beta,.:alpha,beta,. 0:0.34:0.1,0,.:88.4,.:99,88.4,.:0:0,1,.:88,.:99,88,.:alpha:alpha,.:alpha,beta,.:alpha,beta,.
|
