File: split-vep.12.2.out

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#[1]POS	[2]Allele	[3]Consequence	[4]IMPACT	[5]SYMBOL	[6]Gene	[7]Feature_type	[8]Feature	[9]BIOTYPE	[10]EXON	[11]INTRON	[12]HGVSc	[13]HGVSp	[14]cDNA_position	[15]CDS_position	[16]Protein_position	[17]Amino_acids	[18]Codons	[19]Existing_variation	[20]ALLELE_NUM	[21]DISTANCE	[22]STRAND	[23]FLAGS	[24]VARIANT_CLASS	[25]SYMBOL_SOURCE	[26]HGNC_ID	[27]CANONICAL	[28]TSL	[29]APPRIS	[30]CCDS	[31]ENSP	[32]SWISSPROT	[33]TREMBL	[34]UNIPARC	[35]SOURCE	[36]GENE_PHENO	[37]SIFT	[38]PolyPhen	[39]DOMAINS	[40]miRNA	[41]HGVS_OFFSET	[42]AF	[43]AFR_AF	[44]AMR_AF	[45]EAS_AF	[46]EUR_AF	[47]SAS_AF	[48]AA_AF	[49]EA_AF	[50]gnomAD_AF	[51]gnomAD_AFR_AF	[52]gnomAD_AMR_AF	[53]gnomAD_ASJ_AF	[54]gnomAD_EAS_AF	[55]gnomAD_FIN_AF	[56]gnomAD_NFE_AF	[57]gnomAD_OTH_AF	[58]gnomAD_SAS_AF	[59]MAX_AF	[60]MAX_AF_POPS	[61]CLIN_SIG	[62]SOMATIC	[63]PHENO	[64]PUBMED	[65]MOTIF_NAME	[66]MOTIF_POS	[67]HIGH_INF_POS	[68]MOTIF_SCORE_CHANGE	[69]LoF	[70]LoF_filter	[71]LoF_flags	[72]LoF_info	[73]CADD_PHRED	[74]CADD_RAW	[75]gnomAD2.1	[76]gnomAD2.1_AF_raw	[77]gnomAD2.1_AF_popmax	[78]gnomAD2.1_AF_afr	[79]gnomAD2.1_AF_amr	[80]gnomAD2.1_AF_asj	[81]gnomAD2.1_AF_eas	[82]gnomAD2.1_AF_fin	[83]gnomAD2.1_AF_nfe	[84]gnomAD2.1_AF_oth	[85]gnomAD2.1_AF_sas
14464	T	non_coding_transcript_exon_variant	MODIFIER	WASH7P	ENSG00000227232	Transcript	ENST00000423562	unprocessed_pseudogene	10/10	.	ENST00000423562.1:n.1568T>A	.	1568	.	.	.	.	rs546169444	1	.	-1	.	SNV	HGNC	38034	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0.0958	0.0144	0.1138	0.005	0.1859	0.1943	.	.	.	.	.	.	.	.	.	.	.	0.1943	SAS	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
14464	T	non_coding_transcript_exon_variant	MODIFIER	WASH7P	ENSG00000227232	Transcript	ENST00000438504	unprocessed_pseudogene	12/12	.	ENST00000438504.2:n.1682T>A	.	1682	.	.	.	.	rs546169444	1	.	-1	.	SNV	HGNC	38034	YES	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0.0958	0.0144	0.1138	0.005	0.1859	0.1943	.	.	.	.	.	.	.	.	.	.	.	0.1943	SAS	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
14464	T	downstream_gene_variant	MODIFIER	DDX11L1	ENSG00000223972	Transcript	ENST00000456328	processed_transcript	.	.	.	.	.	.	.	.	.	rs546169444	1	55	1	.	SNV	HGNC	37102	YES	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0.0958	0.0144	0.1138	0.005	0.1859	0.1943	.	.	.	.	.	.	.	.	.	.	.	0.1943	SAS	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
14464	T	non_coding_transcript_exon_variant	MODIFIER	WASH7P	ENSG00000227232	Transcript	ENST00000488147	unprocessed_pseudogene	11/11	.	ENST00000488147.1:n.1291T>A	.	1291	.	.	.	.	rs546169444	1	.	-1	.	SNV	HGNC	38034	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0.0958	0.0144	0.1138	0.005	0.1859	0.1943	.	.	.	.	.	.	.	.	.	.	.	0.1943	SAS	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
14464	T	non_coding_transcript_exon_variant	MODIFIER	WASH7P	ENSG00000227232	Transcript	ENST00000538476	unprocessed_pseudogene	13/13	.	ENST00000538476.1:n.1530T>A	.	1530	.	.	.	.	rs546169444	1	.	-1	.	SNV	HGNC	38034	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0.0958	0.0144	0.1138	0.005	0.1859	0.1943	.	.	.	.	.	.	.	.	.	.	.	0.1943	SAS	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
14464	T	non_coding_transcript_exon_variant	MODIFIER	WASH7P	ENSG00000227232	Transcript	ENST00000541675	unprocessed_pseudogene	9/9	.	ENST00000541675.1:n.1315T>A	.	1315	.	.	.	.	rs546169444	1	.	-1	.	SNV	HGNC	38034	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0.0958	0.0144	0.1138	0.005	0.1859	0.1943	.	.	.	.	.	.	.	.	.	.	.	0.1943	SAS	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
14464	T	regulatory_region_variant	MODIFIER	.	.	RegulatoryFeature	ENSR00000000002	open_chromatin_region	.	.	.	.	.	.	.	.	.	rs546169444	1	.	.	.	SNV	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	0.0958	0.0144	0.1138	0.005	0.1859	0.1943	.	.	.	.	.	.	.	.	.	.	.	0.1943	SAS	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.