File: view.vectors.2.vcf

package info (click to toggle)
bcftools 1.22-1
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 22,792 kB
  • sloc: ansic: 72,978; perl: 7,583; sh: 694; python: 595; makefile: 301
file content (25 lines) | stat: -rw-r--r-- 2,058 bytes parent folder | download | duplicates (5)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
##fileformat=VCFv4.2
##contig=<ID=1,length=249250621>
##INFO=<ID=IAF,Number=A,Type=Float,Description="Test Number=AGR in INFO">
##INFO=<ID=IRF,Number=R,Type=Float,Description="Test Number=AGR in INFO">
##INFO=<ID=IGF,Number=G,Type=Float,Description="Test Number=AGR in INFO">
##INFO=<ID=IAI,Number=A,Type=Integer,Description="Test Number=AGR in INFO">
##INFO=<ID=IRI,Number=R,Type=Integer,Description="Test Number=AGR in INFO">
##INFO=<ID=IGI,Number=G,Type=Integer,Description="Test Number=AGR in INFO">
##INFO=<ID=IAS,Number=A,Type=String,Description="Test Number=AGR in INFO">
##INFO=<ID=IRS,Number=R,Type=String,Description="Test Number=AGR in INFO">
##INFO=<ID=IGS,Number=G,Type=String,Description="Test Number=AGR in INFO">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=FAF,Number=A,Type=Float,Description="Test Number=AGR in FORMAT">
##FORMAT=<ID=FRF,Number=R,Type=Float,Description="Test Number=AGR in FORMAT">
##FORMAT=<ID=FGF,Number=G,Type=Float,Description="Test Number=AGR in FORMAT">
##FORMAT=<ID=FAI,Number=A,Type=Integer,Description="Test Number=AGR in FORMAT">
##FORMAT=<ID=FRI,Number=R,Type=Integer,Description="Test Number=AGR in FORMAT">
##FORMAT=<ID=FGI,Number=G,Type=Integer,Description="Test Number=AGR in FORMAT">
##FORMAT=<ID=FAS,Number=A,Type=String,Description="Test Number=AGR in FORMAT">
##FORMAT=<ID=FRS,Number=R,Type=String,Description="Test Number=AGR in FORMAT">
##FORMAT=<ID=FGS,Number=G,Type=String,Description="Test Number=AGR in FORMAT">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	A	B
1	10	.	A	C,T	999	PASS	IAF=.;IRF=.;IGF=.;IAI=.;IRI=.;IGI=.;IAS=.,.;IRS=.,.,.;IGS=.,.,.,.,.,.	GT:FAF:FRF:FGF:FAI:FRI:FGI:FAS:FRS:FGS	0/1:.:.:.:.:.:.:.,.:.,.,.:.,.,.,.,.,.	0/0:.:.:.:.:.:.:.,.:.,.,.:.,.,.,.,.,.
1	20	.	A	T,G	999	PASS	IAF=.;IRF=.;IGF=.;IAI=.;IRI=.;IGI=.;IAS=.,.;IRS=.,.,.;IGS=.,.,.,.,.,.	GT:FAF:FRF:FGF:FAI:FRI:FGI:FAS:FRS:FGS	0/1	0/0:.
1	30	.	G	A,C	999	PASS	IAF=.;IRF=.;IGF=.;IAI=.;IRI=.;IGI=.;IAS=.;IRS=.;IGS=.	GT:FAF:FRF:FGF:FAI:FRI:FGI:FAS:FRS:FGS	0/1:.:.:.:.:.:.:.:.:.	0/0:.:.:.:.:.:.:.:.:.