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# -*-Perl-*-
## Bioperl Test Harness Script for Modules
## # $Id: ECnumber.t,v 1.2 2002/09/11 22:29:18 czmasek Exp $
# Before `make install' is performed this script should be runnable with
# `make test'. After `make install' it should work as `perl test.t'
use strict;
BEGIN {
# to handle systems with no installed Test module
# we include the t dir (where a copy of Test.pm is located)
# as a fallback
eval { require Test; };
if( $@ ) {
use lib 't';
}
use Test;
plan tests => 26;
}
use Bio::Tools::ECnumber;
my $EC1 = Bio::Tools::ECnumber->new( -ec_string => " EC 01. 02.03.00022 ",
-comment => "is 1.2.3.22" );
my $EC2 = Bio::Tools::ECnumber->new( -ec_string => "ec:1.2.3.-",
-comment => "is 1.2.3.-" );
my $EC3 = $EC1->copy();
ok( $EC1->isa( "Bio::Tools::ECnumber" ) );
ok( $EC3->isa( "Bio::Tools::ECnumber" ) );
ok( $EC1->EC_string(), "1.2.3.22" );
ok( $EC1->EC_string(), "1.2.3.22" );
ok( $EC1->to_string(), "1.2.3.22" );
ok( $EC1->comment(), "is 1.2.3.22" );
ok( $EC1->enzyme_class(), "1" );
ok( $EC1->sub_class(), "2" );
ok( $EC1->sub_sub_class(), "3" );
ok( $EC1->serial_number(), "22" );
ok( $EC3->is_equal( $EC1 ) );
ok( $EC3->is_equal( "1.2.3.22" ) );
ok( ! $EC3->is_equal( "1.2.3.-" ) );
ok( ! $EC3->is_equal( "1.2.3.23" ) );
ok( $EC1->is_member( $EC2 ) );
ok( $EC1->is_member( "1.2.3.-" ) );
$EC1->init();
ok( $EC2->is_member( $EC1 ) );
ok( $EC1->to_string(), "-.-.-.-" );
$EC1->enzyme_class( 44 );
$EC1->sub_class( "033" );
$EC1->sub_sub_class( 22 );
$EC1->serial_number( "-" );
ok( $EC1->to_string(), "44.33.22.-" );
ok( ! $EC1->is_member( "44.33.23.-" ) );
ok( ! $EC1->is_member( "44.33.22.1" ) );
ok( $EC1->is_member( "-.-.-.-" ) );
ok( $EC1->is_member( "44.-.-.-" ) );
ok( $EC1->is_member( "44.33.-.-" ) );
ok( $EC1->is_member( "EC 44.33.22.-" ) );
ok( ! $EC1->is_member( "45.33.22.-" ) );
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