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# -*-Perl-*-
## Bioperl Test Harness Script for Modules
## # $Id: OMIMentryAllelicVariant.t,v 1.2 2002/09/17 01:41:43 czmasek Exp $
# Before `make install' is performed this script should be runnable with
# `make test'. After `make install' it should work as `perl test.t'
use strict;
BEGIN {
# to handle systems with no installed Test module
# we include the t dir (where a copy of Test.pm is located)
# as a fallback
eval { require Test; };
if( $@ ) {
use lib 't';
}
use Test;
plan tests => 26;
}
use Bio::Phenotype::OMIM::OMIMentryAllelicVariant;
my $av = Bio::Phenotype::OMIM::OMIMentryAllelicVariant->new( -number => ".0001",
-title => "ALCOHOL INTOLERANCE",
-symbol => "ALDH2*2",
-description => "The ALDH2*2-encoded ...",
-aa_ori => "GLU",
-aa_mut => "LYS",
-position => 487,
-additional_mutations => "IVS4DS, G-A, +1" );
ok( $av->isa( "Bio::Phenotype::OMIM::OMIMentryAllelicVariant" ) );
ok( $av->to_string() );
ok( $av->number(), ".0001" );
ok( $av->title(), "ALCOHOL INTOLERANCE" );
ok( $av->symbol(), "ALDH2*2" );
ok( $av->description(), "The ALDH2*2-encoded ..." );
ok( $av->aa_ori(), "GLU" );
ok( $av->aa_mut(), "LYS" );
ok( $av->position(), 487 );
ok( $av->additional_mutations(), "IVS4DS, G-A, +1" );
$av->init();
ok( $av->number(), "" );
ok( $av->title(), "" );
ok( $av->symbol(), "" );
ok( $av->description(), "" );
ok( $av->aa_ori(), "" );
ok( $av->aa_mut(), "" );
ok( $av->position(), "" );
ok( $av->additional_mutations(), "" );
ok( $av->number( "A" ), "A" );
ok( $av->title( "B" ), "B" );
ok( $av->symbol( "C" ), "C" );
ok( $av->description( "D" ), "D" );
ok( $av->aa_ori( "E" ), "E" );
ok( $av->aa_mut( "F" ), "F" );
ok( $av->position( "G" ), "G" );
ok( $av->additional_mutations( "H" ), "H" );
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