File: gf-s71.needle

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########################################
# Program:  needle
# Rundate:  Thu Jun 20 10:53:54 2002
# Report_file: /tmp/jason/water/1/gf.s71.44_Y50C1A.2.water
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: gf.s71.44
# 2: Y50C1A.2
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 468
# Identity:     285/468 (60.9%)
# Similarity:   339/468 (72.4%)
# Gaps:          82/468 (17.5%)
# Score: 1394.0
# 
#
#=======================================

gf.s71.44          1 MEDVTLHHFRWRKPVENKNGEIVYKTSETQTAEISRKDVECVANFQKSQE     50
                     ||||||..|.||||: ...||||||||||||.|.::||||||||||:::|
Y50C1A.2           1 MEDVTLFQFTWRKPI-RLQGEIVYKTSETQTIETNKKDVECVANFQENKE     49

gf.s71.44         51 SQTDDFMQNGVGDGIKKEIRISKEVLGHIYDFLRDDSKVNYDRLLEFHKF    100
                     .|||. :.||||:.:||:|.||||||..:|||:|||||||||||||||||
Y50C1A.2          50 VQTDS-VDNGVGENVKKDITISKEVLNLLYDFVRDDSKVNYDRLLEFHKF     98

gf.s71.44        101 DKVSLETVQKYHVETRNENIILMISNSSRKTLILFGGLSHETFCSHQARA    150
                     |||:|||||||||||||||||||||:|||||||||||:||||||||||||
Y50C1A.2          99 DKVALETVQKYHVETRNENIILMISSSSRKTLILFGGISHETFCSHQARA    148

gf.s71.44        151 VLCSSSTTSSLPLPVCAISAVFYSSTQFLLGDISGNISMWTKEKMIFENK    200
                     :||||||:.|:|||||||||||||||||:|||:||||||.:|:|:|||.|
Y50C1A.2         149 LLCSSSTSFSIPLPVCAISAVFYSSTQFILGDVSGNISMCSKDKIIFEKK    198

gf.s71.44        201 VTDGSVTSLELCRYGLLSGSDDGNVILWKVEESKIEKIEGIKLTVSDLSR    250
                     :|||:||.||:||:||||||||||:|||::..|.:||:.|.|||||||||
Y50C1A.2         199 ITDGAVTCLEMCRHGLLSGSDDGNIILWQIGTSGLEKLGGTKLTVSDLSR    248

gf.s71.44        251 KIRRSSTSNKPVAIVSMQV----SGDEVCVATETGGLYLLTLPTLESKPL    296
                     |||||||||||||||||||    ||:|.|||||||||||||||||:.|||
Y50C1A.2         249 KIRRSSTSNKPVAIVSMQVYVWPSGEEACVATETGGLYLLTLPTLDYKPL    298

gf.s71.44        297 T-QSATSIFKILYEHPYIAVVYHTSNSAIFNSEGLVDEIPFVATLAVRCG    345
                     : |:||||.|||:|:.::||:|||||:|:|||||||||||||||||||  
Y50C1A.2         299 SHQTATSINKILFENQFVAVIYHTSNAAVFNSEGLVDEIPFVATLAVR--    346

gf.s71.44        346 AYFIFSNQSRLIIWSMNTRSTVIDENLNCHS-ICSLSND-----------    383
                             .:|:::  .|...|.|..|||.| ....:|:           
Y50C1A.2         347 --------PKLVLF--YTSVCVQDITLNCTSPFREFNNEYNPVIKFSKIR    386

gf.s71.44        384 ---TLQVLDGDFNLNSQSENSATSESENLRISDLQNLRMLKLQNLRTSEF    430
                        .|.|::| |..:|.:.|:                             
Y50C1A.2         387 FSADLSVING-FRTSSPNSNN                                 406

gf.s71.44        431 QNFRTSESQYFKKDNGEL    448
                                       
Y50C1A.2         407                       406


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