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# -*-Perl-*- Test Harness script for Bioperl
# $Id: bl2seq.t 14971 2008-10-28 16:08:52Z cjfields $
use strict;
BEGIN {
use lib '.';
use Bio::Root::Test;
test_begin(-tests => 3);
use_ok('Bio::AlignIO::bl2seq');
}
my $DEBUG = test_debug();
my ($str,$aln,$strout,$status);
# BL2SEQ
$str = Bio::AlignIO->new(
'-file' => test_input_file("bl2seq.out"),
'-format' => 'bl2seq',
'-report_type' => 'blastp');
$aln = $str->next_aln();
isa_ok($aln,'Bio::Align::AlignI');
is $aln->get_seq_by_pos(2)->get_nse, 'ALEU_HORVU/60-360',
"BLAST bl2seq format test";
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