1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
|
# -*-Perl-*- Test Harness script for Bioperl
# $Id: EntrezGene.t 16089 2009-09-15 21:34:07Z cjfields $
use strict;
BEGIN {
use lib '.';
use Bio::Root::Test;
test_begin(-tests => 8,
-requires_modules => [qw(IO::String
LWP::UserAgent
HTTP::Request::Common
Bio::ASN1::EntrezGene)
],
-requires_networking => 1);
use_ok('Bio::DB::EntrezGene');
}
my ($gb, $seq, $seqio);
#
# Bio::DB::EntrezGene
#
SKIP: {
test_skip(-tests => 7);
ok $gb = Bio::DB::EntrezGene->new(-retrievaltype => 'tempfile', -delay => 0);
eval {$seqio = $gb->get_Stream_by_id([2,3064]);};
skip "Couldn't connect to Entrez with Bio::DB::EntrezGene. Skipping those tests", 6 if $@;
$seq = $seqio->next_seq;
is $seq->display_id, "A2M";
is $seq->accession_number, 2;
$seq = $seqio->next_seq;
is $seq->display_id, "HTT";
is $seq->accession_number, 3064;
eval {$seq = $gb->get_Seq_by_id(6099);};
skip "Couldn't connect to Entrez with Bio::DB::EntrezGene. Skipping those tests", 2 if $@;
is $seq->display_id, "RP";
is $seq->accession_number, 6099;
}
|
