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# -*-Perl-*- Test Harness script for Bioperl
# $Id: GbrowseGFF.t 16089 2009-09-15 21:34:07Z cjfields $
use strict;
BEGIN {
use lib '.';
use Bio::Root::Test;
test_begin(-tests => 4);
use_ok('Bio::SearchIO');
}
my $in = Bio::SearchIO->new(-format => 'blast',
-file => test_input_file('brassica_ATH.WUBLASTN'));
my $outfile = test_output_file();
my $out = Bio::SearchIO->new(-output_format => 'GbrowseGFF',
-prefix => 'Sequence',
-output_cigar => 1,
-output_signif => 1,
-file => ">$outfile");
ok($out);
while( my $r = $in->next_result ) {
ok($out->write_result($r));
}
ok(-s $outfile);
# tests checking file output?
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