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# -*-Perl-*- Test Harness script for Bioperl
# $Id: asciitree.t 16168 2009-09-25 21:07:32Z cjfields $
# `make test'. After `make install' it should work as `perl test.t'
use strict;
BEGIN {
use lib '.';
use Bio::Root::Test;
test_begin(-tests => 2);
use_ok('Bio::SeqIO');
}
my $verbose = test_debug();
# asciitree is a write-only format
my $in = Bio::SeqIO->new(-format => 'genbank',
-verbose => $verbose,
-file => test_input_file('AE003644_Adh-genomic.gb'));
my $seq = $in->next_seq;
my $out_file = test_output_file();
my $out = Bio::SeqIO->new(-file => ">".$out_file,
-verbose => $verbose,
-format => 'asciitree');
$out->write_seq($seq);
# this is a bug and is failing on some systems like IRIX (not sure why, maybe
# File::Temp?)
if (-s $out_file) {
ok(1, "File exists, has contents on ".$^O);
} else {
TODO: {
local $TODO = "Output doesn't exists on ".$^O;
ok(-s $out_file);
}
}
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