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# -*-Perl-*- Test Harness script for Bioperl
# $Id: Mitoprot.t 15112 2008-12-08 18:12:38Z sendu $
use strict;
BEGIN {
use lib '.';
use Bio::Root::Test;
test_begin(-tests => 10,
-requires_modules => [qw(IO::String LWP::UserAgent)],
-requires_networking => 1);
use_ok 'Bio::Tools::Analysis::Protein::Mitoprot';
use_ok 'Bio::PrimarySeq';
use_ok 'Bio::WebAgent';
}
my $verbose = test_debug();
ok my $tool = Bio::WebAgent->new(-verbose =>$verbose);
my $seq = Bio::PrimarySeq->new(-seq => 'MSADQRWRQDSQDSFGDSFDGDSFFGSDFDGDS'.
'DFGSDFGSDGDFGSDFGDSFGDGFSDRSRQDQRS',
-display_id => 'test2');
ok $tool = Bio::Tools::Analysis::Protein::Mitoprot->new( -seq=>$seq);
SKIP: {
ok $tool->run();
skip('Server terminated with an error, skipping tests', 4) if $tool->status eq 'TERMINATED_BY_ERROR';
ok my $raw = $tool->result('');
ok my $parsed = $tool->result('parsed');
is ($parsed->{'charge'}, -13);
ok my @res = $tool->result('Bio::SeqFeatureI');
}
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