File: char-matrix-spaces.nex

package info (click to toggle)
bioperl 1.6.1-2
  • links: PTS, VCS
  • area: main
  • in suites: squeeze
  • size: 40,768 kB
  • ctags: 12,005
  • sloc: perl: 174,299; xml: 13,923; sh: 1,941; lisp: 1,803; asm: 109; makefile: 53
file content (25 lines) | stat: -rw-r--r-- 496 bytes parent folder | download | duplicates (8)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
#NEXUS

BEGIN TAXA;
      dimensions ntax=8;
      taxlabels A B C D E F G H;  
END;

BEGIN CHARACTERS;
      dimensions nchar=6;
      format datatype=protein missing=? gap=-;
      charlabels one two three four five six;
      matrix
A     W I T  H - B
B     W I T  H - A
C     W I T  H - D
D     W I T  H - C
E     W I T  H - F
F     W I T  H - E
G     W I T  H - H
H     W I T  H - G;
END;

BEGIN TREES;
       tree basic_bush = (((A:1,B:1):1,(C:1,D:1):1):1,((E:1,F:1):1,(G:1,H:1):1):1);
END;