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Query= zinc finger protein 135 (clone pHZ-17) [Homo sapiens]. neo_id
RS.ctg14243-000000.6.0
(469 letters)
>gi|4507985| zinc finger protein 135 (clone pHZ-17) [Homo sapiens].
neo_id RS.ctg14243-000000.6.0
Length = 469
Score = 637 bits (1626), Expect = 0.0
Identities = 311/469 (66%), Positives = 330/469 (70%), Gaps = 120/469 (25%)
Query: 121 MGNTWKKGEARPKCFTENCVKEKPYKCQECGKAFSHSSALIEHHRTHTGERPYECHECLK 180
MGNTWKKGEARPKCFTENCVKEKPYKCQECGKAFSHSSALIEHHRTHTGERPYECHECLK
Sbjct: 1 MGNTWKKGEARPKCFTENCVKEKPYKCQECGKAFSHSSALIEHHRTHTGERPYECHECLK 60
Query: 181 GFRNSSALTKHQRIHTGEKPYKCTQCGRTFNQIAPLIQHQRTHTGEKPYECSECGKSFSF 240
GFRNSSALTKHQRIHTGEKPYKCTQCGRTFNQIAPLIQHQRTHTGEKPYECSECGKSFSF
Sbjct: 61 GFRNSSALTKHQRIHTGEKPYKCTQCGRTFNQIAPLIQHQRTHTGEKPYECSECGKSFSF 120
Query: 241 RSSFSQHERTHTGEKPYECSECGKAFR--------------------------------- 267
RSSFSQHERTHTGEKPYECSECGKAFR
Sbjct: 121 RSSFSQHERTHTGEKPYECSECGKAFRQSIHLTQHLRIHTGEKPYQCGECGKAFSHSSSL 180
Query: 268 ---QSIH--------------------LTQHLRIHTGEKPYQCGECGKAFSHSSSL---- 300
Q IH L QH R HTGEKPY+CGECGKAFS S+ L
Sbjct: 181 TKHQRIHTGEKPYECHECGKAFTQITPLIQHQRTHTGEKPYECGECGKAFSQSTLLTEHR 240
Query: 301 ----GEKPYECNDCGKAFSHSSSLTKHQRIHTGEKPYECNQCGRAFSQLAPLIQHQRIHT 356
GEKPY CN+CGK FSHSSSL++H+R HTGEKPYEC+QCG+AF Q L QHQRIHT
Sbjct: 241 RIHTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKPYECSQCGKAFRQSTHLTQHQRIHT 300
Query: 357 GEKP----------------TKHQRIHTGEKPYECHECGKAFTQITPLIQHQRTHTGEKP 400
GEKP TKHQRIHTGEKPYEC++CG+AF+Q+ PLIQHQR HTGEKP
Sbjct: 301 GEKPYECNDCGKAFSHSSSLTKHQRIHTGEKPYECNQCGRAFSQLAPLIQHQRIHTGEKP 360
Query: 401 YECGECGKAFSQSTLLTEHR---------------------------------------- 420
YEC +CG+A +++TLL EH+
Sbjct: 361 YECNQCGRASARATLLIEHQRIHTKEKPYGCNECGKSFSHSSSLSQHERTHTGEKPYECH 420
Query: 421 DCGKSFRQSTHLTQHRRIHTGEKPYACRDCGKAFTHSSSLTKHQRTHTG 469
DCGKSFRQSTHLTQHRRIHTGEKPYACRDCGKAFTHSSSLTKHQRTHTG
Sbjct: 421 DCGKSFRQSTHLTQHRRIHTGEKPYACRDCGKAFTHSSSLTKHQRTHTG 469
Score = 598 bits (1524), Expect = e-175
Identities = 275/444 (61%), Positives = 324/444 (72%), Gaps = 30/444 (6%)
Query: 6 EKPYGCNECGKTFSHSSSLSQHERTHTGEKPYECSQCGKAFRQSTHLTQHQRIHT----Y 61
EKPY C ECGK FSHSS+L +H RTHTGE+PYEC +C K FR S+ LT+HQRIHT Y
Sbjct: 22 EKPYKCQECGKAFSHSSALIEHHRTHTGERPYECHECLKGFRNSSALTKHQRIHTGEKPY 81
Query: 62 ECNQCGRASARATLLIEHQRIHTKEKPYGCNECGKXXXXXXXXXQHERTHTGEKPYEC-H 120
+C QCGR + LI+HQR HT EKPY C+ECGK QHERTHTGEKPYEC
Sbjct: 82 KCTQCGRTFNQIAPLIQHQRTHTGEKPYECSECGKSFSFRSSFSQHERTHTGEKPYECSE 141
Query: 121 MGNTWKKGEARPKCFTENCVKEKPYKCQECGKAFSHSSALIEHHRTHTGERPYECHECLK 180
G +++ + + EKPY+C ECGKAFSHSS+L +H R HTGE+PYECHEC K
Sbjct: 142 CGKAFRQSIHLTQHLRIH-TGEKPYQCGECGKAFSHSSSLTKHQRIHTGEKPYECHECGK 200
Query: 181 GFRNSSALTKHQRIHTGEKPYKCTQCGRTFNQIAPLIQHQRTHTGEKPYECSECGKSFSF 240
F + L +HQR HTGEKPY+C +CG+ F+Q L +H+R HTGEKPY C+ECGK+FS
Sbjct: 201 AFTQITPLIQHQRTHTGEKPYECGECGKAFSQSTLLTEHRRIHTGEKPYGCNECGKTFSH 260
Query: 241 RSSFSQHERTHTGEKPYECSECGKAFRQSIHLTQHLRIHTGEKPYQCGECGKAFSHSSSL 300
SS SQHERTHTGEKPYECS+CGKAFRQS HLTQH RIHTGEKPY+C +CGKAFSHSSSL
Sbjct: 261 SSSLSQHERTHTGEKPYECSQCGKAFRQSTHLTQHQRIHTGEKPYECNDCGKAFSHSSSL 320
Query: 301 --------GEKPYECNDCGKAFSHSSSLTKHQRIHTGEKPYECNQCGRAFSQLAPLIQHQ 352
GEKPYECN CG+AFS + L +HQRIHTGEKPYECNQCGRA ++ LI+HQ
Sbjct: 321 TKHQRIHTGEKPYECNQCGRAFSQLAPLIQHQRIHTGEKPYECNQCGRASARATLLIEHQ 380
Query: 353 RIHTGEKP----------------TKHQRIHTGEKPYECHECGKAFTQITPLIQHQRTHT 396
RIHT EKP ++H+R HTGEKPYECH+CGK+F Q T L QH+R HT
Sbjct: 381 RIHTKEKPYGCNECGKSFSHSSSLSQHERTHTGEKPYECHDCGKSFRQSTHLTQHRRIHT 440
Query: 397 GEKPYECGECGKAFSQSTLLTEHR 420
GEKPY C +CGKAF+ S+ LT+H+
Sbjct: 441 GEKPYACRDCGKAFTHSSSLTKHQ 464
Score = 499 bits (1270), Expect = e-145
Identities = 226/372 (60%), Positives = 274/372 (72%), Gaps = 18/372 (4%)
Query: 1 RIHTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKPYECSQCGKAFRQSTHLTQHQRIHT 60
R HTGEKPY C+ECGK+FS SS SQHERTHTGEKPYECS+CGKAFRQS HLTQH RIHT
Sbjct: 101 RTHTGEKPYECSECGKSFSFRSSFSQHERTHTGEKPYECSECGKAFRQSIHLTQHLRIHT 160
Query: 61 ----YECNQCGRASARATLLIEHQRIHTKEKPYGCNECGKXXXXXXXXXQHERTHTGEKP 116
Y+C +CG+A + ++ L +HQRIHT EKPY C+ECGK QH+RTHTGEKP
Sbjct: 161 GEKPYQCGECGKAFSHSSSLTKHQRIHTGEKPYECHECGKAFTQITPLIQHQRTHTGEKP 220
Query: 117 YECHMGNTWKKGEARPKCFTEN---CVKEKPYKCQECGKAFSHSSALIEHHRTHTGERPY 173
YEC K ++ TE+ EKPY C ECGK FSHSS+L +H RTHTGE+PY
Sbjct: 221 YEC---GECGKAFSQSTLLTEHRRIHTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKPY 277
Query: 174 ECHECLKGFRNSSALTKHQRIHTGEKPYKCTQCGRTFNQIAPLIQHQRTHTGEKPYECSE 233
EC +C K FR S+ LT+HQRIHTGEKPY+C CG+ F+ + L +HQR HTGEKPYEC++
Sbjct: 278 ECSQCGKAFRQSTHLTQHQRIHTGEKPYECNDCGKAFSHSSSLTKHQRIHTGEKPYECNQ 337
Query: 234 CGKSFSFRSSFSQHERTHTGEKPYECSECGKAFRQSIHLTQHLRIHTGEKPYQCGECGKA 293
CG++FS + QH+R HTGEKPYEC++CG+A ++ L +H RIHT EKPY C ECGK+
Sbjct: 338 CGRAFSQLAPLIQHQRIHTGEKPYECNQCGRASARATLLIEHQRIHTKEKPYGCNECGKS 397
Query: 294 FSHSSSL--------GEKPYECNDCGKAFSHSSSLTKHQRIHTGEKPYECNQCGRAFSQL 345
FSHSSSL GEKPYEC+DCGK+F S+ LT+H+RIHTGEKPY C CG+AF+
Sbjct: 398 FSHSSSLSQHERTHTGEKPYECHDCGKSFRQSTHLTQHRRIHTGEKPYACRDCGKAFTHS 457
Query: 346 APLIQHQRIHTG 357
+ L +HQR HTG
Sbjct: 458 SSLTKHQRTHTG 469
Lambda K H
0.318 0.131 0.428
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38599
Number of Sequences: 0
Number of extensions: 270
Number of successful extensions: 108
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 469
length of database: 469
effective HSP length: 23
effective length of query: 446
effective length of database: 446
effective search space: 198916
effective search space used: 198916
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 25 (14.4 bits)
S2: 26 (14.5 bits)
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