File: 1ZZ19XR301R-Alignment.tblastn

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file content (38858 lines) | stat: -rwxr-xr-x 1,980,068 bytes parent folder | download | duplicates (8) 
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TBLASTN 2.2.20+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro
A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and
David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new
generation of protein database search programs", Nucleic
Acids Res. 25:3389-3402.


RID: 1ZZ19XR301R


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           8,818,151 sequences; 27,400,875,368 total letters
Query= gi|5032311|ref|NP_004013.1| dystrophin Dp140ab isoform [Homo sapiens]
Length=1230


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

ref|NM_004022.2|  Homo sapiens dystrophin (DMD), transcript va...  2544    0.0   
dbj|AB208836.1|  Homo sapiens mRNA for dystrophin Dp427c isofo...  2538    0.0   
ref|NM_004021.2|  Homo sapiens dystrophin (DMD), transcript va...  2534    0.0   
gb|BC150141.1|  Homo sapiens dystrophin, mRNA (cDNA clone IMAG...  2531    0.0   
ref|NM_004010.3|  Homo sapiens dystrophin (DMD), transcript va...  2486    0.0   
ref|NM_004009.3|  Homo sapiens dystrophin (DMD), transcript va...  2486    0.0   
ref|NM_004007.2|  Homo sapiens dystrophin (DMD), transcript va...  2486    0.0   
ref|NM_004006.2|  Homo sapiens dystrophin (DMD), transcript va...  2486    0.0   
ref|NM_000109.3|  Homo sapiens dystrophin (DMD), transcript va...  2486    0.0   
gb|EU048698.1|  Shuttle vector phcAd.DYS-FL, complete sequence     2486    0.0   
gb|M18533.1|HUMDYS  Homo sapiens dystrophin (DMD) mRNA, comple...  2486    0.0   
emb|X14298.1|  Human mRNA for dystrophin                           2486    0.0   
gb|BC111836.3|  Synthetic construct Homo sapiens clone IMAGE:4...  2485    0.0   
gb|BC118002.1|  Synthetic construct Homo sapiens clone IMAGE:4...  2485    0.0   
gb|BC111934.1|  Synthetic construct Homo sapiens clone IMAGE:4...  2485    0.0   
gb|BC111587.2|  Synthetic construct Homo sapiens clone IMAGE:4...  2485    0.0   
ref|NM_004012.3|  Homo sapiens dystrophin (DMD), transcript va...  2484    0.0   
ref|NM_004011.3|  Homo sapiens dystrophin (DMD), transcript va...  2484    0.0   
ref|NM_004013.2|  Homo sapiens dystrophin (DMD), transcript va...  2469    0.0   
gb|BC127103.1|  Homo sapiens dystrophin, mRNA (cDNA clone IMAG...  2467    0.0   
ref|XR_022800.1|  PREDICTED: Pan troglodytes dystrophin (DMD),...  2450    0.0   
ref|XM_850502.1|  PREDICTED: Canis familiaris hypothetical pro...  2449    0.0   
emb|AJ865385.1|  Sus scrofa mRNA for dystrophin variant Dp427 ...  2447    0.0   
ref|XM_001488124.2|  PREDICTED: Equus caballus similar to dyst...  2443    0.0   
gb|AF070485.1|  Canis familiaris dystrophin mRNA, complete cds     2429    0.0   
ref|NM_007868.5|  Mus musculus dystrophin, muscular dystrophy ...  2414    0.0   
gb|M68859.1|MUSDYSA  Mouse dystrophin mRNA, complete cds           2414    0.0   
ref|XM_001379309.1|  PREDICTED: Monodelphis domestica similar ...  2325    0.0   
emb|X13369.1|  Chicken mRNA for dystrophin (Duchenne muscular ...  2182    0.0   
ref|XM_002191629.1|  PREDICTED: Taeniopygia guttata dystrophin...  2078    0.0   
ref|NM_004023.2|  Homo sapiens dystrophin (DMD), transcript va...  1975    0.0   
ref|NM_004020.2|  Homo sapiens dystrophin (DMD), transcript va...  1955    0.0   
ref|NM_004014.2|  Homo sapiens dystrophin (DMD), transcript va...  1905    0.0   
ref|XM_001096400.1|  PREDICTED: Macaca mulatta similar to dyst...  1707    0.0   
gb|AF339031.1|AF339031  Danio rerio dystrophin (dmd) mRNA, par...  1583    0.0   
gb|BC085236.1|  Mus musculus dystrophin, muscular dystrophy, m...  1519    0.0   
ref|XM_419648.2|  PREDICTED: Gallus gallus utrophin (homologou...  1508    0.0   
ref|XM_518782.2|  PREDICTED: Pan troglodytes utrophin, transcr...  1498    0.0   
ref|XM_001172875.1|  PREDICTED: Pan troglodytes utrophin, tran...  1498    0.0   
ref|XM_001172869.1|  PREDICTED: Pan troglodytes utrophin, tran...  1498    0.0   
ref|XM_001506948.1|  PREDICTED: Ornithorhynchus anatinus simil...  1495    0.0   
gb|M37645.1|FSCDYSTRO  Torpedo californica dystrophin mRNA, 3'...  1493    0.0   
ref|XR_054516.1|  PREDICTED: Taeniopygia guttata misc_RNA (LOC...  1491    0.0   
ref|XM_001380994.1|  PREDICTED: Monodelphis domestica similar ...  1481    0.0   
ref|NM_007124.2|  Homo sapiens utrophin (UTRN), mRNA               1470    0.0   
emb|X69086.1|  H.sapiens mRNA for utrophin                         1470    0.0   
ref|XM_001788161.1|  PREDICTED: Bos taurus similar to putative...  1467    0.0   
emb|AJ002967.1|  Rattus norvegicus mRNA for utrophin               1467    0.0   
ref|XR_010548.1|  PREDICTED: Macaca mulatta utrophin (UTRN), mRNA  1459    0.0   
gb|AY095485.1|  Canis familiaris utrophin mRNA, complete cds       1457    0.0   
ref|XM_001915985.1|  PREDICTED: Equus caballus similar to utro...  1451    0.0   
ref|NM_011682.4|  Mus musculus utrophin (Utrn), mRNA               1438    0.0   
emb|Y12229.1|  M.musculus mRNA for utrophin                        1438    0.0   
gb|M92650.1|HUMDMDXX  Human Duchenne muscular dystrophy (DMD) ...  1299    0.0   
ref|NM_004018.2|  Homo sapiens dystrophin (DMD), transcript va...  1298    0.0   
emb|CR859102.1|  Pongo abelii mRNA; cDNA DKFZp459C1629 (from c...  1295    0.0   
ref|NM_001005244.1|  Rattus norvegicus dystrophin, muscular dy...  1294    0.0   
gb|AY326948.1|  Rattus norvegicus dystrophin Dp71ab (Dmd) mRNA...  1290    0.0   
gb|BC094758.1|  Homo sapiens dystrophin, mRNA (cDNA clone IMAG...  1287    0.0   
gb|BC028720.1|  Homo sapiens dystrophin, mRNA (cDNA clone IMAG...  1287    0.0   
ref|NM_004016.2|  Homo sapiens dystrophin (DMD), transcript va...  1286    0.0   
emb|CR858847.1|  Pongo abelii mRNA; cDNA DKFZp469A0710 (from c...  1266    0.0   
emb|X83506.1|  M.musculus mRNA for G-utrophin                      1237    0.0   
emb|CR848277.2|  Xenopus tropicalis finished cDNA, clone TNeu1...  1236    0.0   
gb|BC080941.1|  Xenopus tropicalis dystrophin, mRNA (cDNA clon...  1236    0.0   
ref|NM_004017.2|  Homo sapiens dystrophin (DMD), transcript va...  1235    0.0   
ref|NM_012698.2|  Rattus norvegicus dystrophin, muscular dystr...  1234    0.0   
gb|BC149235.1|  Bos taurus dystrophin, mRNA (cDNA clone MGC:15...  1230    0.0   
gb|BC070078.1|  Homo sapiens dystrophin, mRNA (cDNA clone IMAG...  1230    0.0   
gb|AY326947.1|  Rattus norvegicus dystrophin Dp71a (Dmd) mRNA,...  1229    0.0   
ref|NM_004015.2|  Homo sapiens dystrophin (DMD), transcript va...  1224    0.0   
dbj|AK036936.1|  Mus musculus adult female vagina cDNA, RIKEN ...  1223    0.0   
gb|BC082429.1|  Xenopus laevis dystrophin, mRNA (cDNA clone MG...  1220    0.0   
gb|BC136240.1|  Xenopus tropicalis cDNA clone IMAGE:7661888, c...  1142    0.0   
dbj|AK159639.1|  Mus musculus osteoclast-like cell cDNA, RIKEN...  1104    0.0   
emb|X99702.1|  S.caniculua mRNA for dystrophin                     1100    0.0   
emb|X99700.1|  X.laevis mRNA for dystrophin                        1100    0.0   
ref|XM_002227549.1|  Branchiostoma floridae hypothetical prote...  1096    0.0   
gb|AF304204.1|AF304204  Strongylocentrotus purpuratus dystroph...  1093    0.0   
ref|XM_001918785.1|  PREDICTED: Danio rerio hypothetical LOC79...  1092    0.0   
gb|BC095190.1|  Danio rerio dystrophin, mRNA (cDNA clone MGC:1...  1091    0.0   
ref|XM_001060977.1|  PREDICTED: Rattus norvegicus similar to d...  1081    0.0   
gb|U43517.2|SCU43517  Scyliorhinus canicula dystrophin-related...  1078    0.0   
ref|XM_002187321.1|  PREDICTED: Taeniopygia guttata similar to...  1025    0.0   
gb|U43519.1|HSU43519  Human dystrophin-related protein 2 (DRP2...  1005    0.0   
ref|XM_001493019.2|  PREDICTED: Equus caballus dystrophin rela...  1003    0.0   
dbj|AK295843.1|  Homo sapiens cDNA FLJ52301 complete cds, high...  1002    0.0   
gb|BC162218.1|  Danio rerio dystrophin related protein 2, mRNA...  1002    0.0   
ref|XM_001092374.1|  PREDICTED: Macaca mulatta dystrophin rela...  1001    0.0   
ref|NM_001939.2|  Homo sapiens dystrophin related protein 2 (D...  1001    0.0   
gb|BC111695.1|  Homo sapiens dystrophin related protein 2, mRN...  1001    0.0   
gb|DQ443728.1|  Danio rerio dystrophin-related protein 2 (DRP2...  1001    0.0   
dbj|AB384915.1|  Synthetic construct DNA, clone: pF1KB4196, Ho...  1000    0.0   
dbj|AK289825.1|  Homo sapiens cDNA FLJ75585 complete cds, high...   999    0.0   
gb|AF195788.1|AF195788  Rattus norvegicus dystrophin-related p...   996    0.0   
gb|AF195787.1|AF195787  Rattus norvegicus dystrophin-related p...   996    0.0   
ref|XM_538105.2|  PREDICTED: Canis familiaris similar to Dystr...   994    0.0   
dbj|AK158102.1|  Mus musculus adult inner ear cDNA, RIKEN full...   993    0.0   
ref|NM_010078.3|  Mus musculus dystrophin related protein 2 (D...   991    0.0   
gb|BC125347.1|  Mus musculus dystrophin related protein 2, mRN...   991    0.0   
gb|BC125345.1|  Mus musculus dystrophin related protein 2, mRN...   991    0.0   
ref|XM_001364344.1|  PREDICTED: Monodelphis domestica similar ...   991    0.0   
ref|XM_617584.4|  PREDICTED: Bos taurus similar to dystrophin ...   991    0.0   
dbj|AK081426.1|  Mus musculus 16 days embryo head cDNA, RIKEN ...   989    0.0   
tpg|BK005803.1|  TPA: TPA_inf: Ornithorhynchus anatinus dystro...   981    0.0   
emb|AJ223356.1|  Strongylocentrotus purpuratus mRNA for SuDp98...   973    0.0   
ref|XR_023213.1|  PREDICTED: Pan troglodytes similar to dystro...   953    0.0   
gb|BC136034.1|  Xenopus tropicalis dystrophin related protein ...   929    0.0   
ref|XM_001342272.2|  PREDICTED: Danio rerio similar to dystrop...   929    0.0   
ref|XM_001863085.1|  Culex quinquefasciatus dystrophin major m...   912    0.0   
ref|NM_001043259.1|  Drosophila melanogaster dystrophin (Dys),...   903    0.0   
gb|AF277386.1|AF277386  Drosophila melanogaster dystrophin-lik...   903    0.0   
ref|XM_001954777.1|  Drosophila ananassae GF16554 (Dana\GF1655...   894    0.0   
ref|NM_001043257.1|  Drosophila melanogaster dystrophin (Dys),...   894    0.0   
gb|AF297644.1|AF297644  Drosophila melanogaster dystrophin-lik...   892    0.0   
ref|NM_001043263.1|  Drosophila melanogaster dystrophin (Dys),...   892    0.0   
ref|NM_001043261.1|  Drosophila melanogaster dystrophin (Dys),...   892    0.0   
ref|NM_001043258.1|  Drosophila melanogaster dystrophin (Dys),...   892    0.0   
ref|XM_394154.3|  PREDICTED: Apis mellifera similar to dystrop...   890    0.0   
ref|XM_001946756.1|  PREDICTED: Acyrthosiphon pisum similar to...   863    0.0   
ref|NM_001043256.1|  Drosophila melanogaster dystrophin (Dys),...   863    0.0   
gb|DQ440978.1|  Petromyzon marinus dystrophin mRNA, partial cds     862    0.0   
ref|XM_001979487.1|  Drosophila erecta GG23350 (Dere\GG23350),...   862    0.0   
ref|XM_002072801.1|  Drosophila willistoni GK13817 (Dwil\GK138...   853    0.0   
ref|XM_001996213.1|  Drosophila grimshawi GH22298 (Dgri\GH2229...   852    0.0   
ref|XM_001999329.1|  Drosophila mojavensis GI23105 (Dmoj\GI231...   849    0.0   
ref|XM_002054550.1|  Drosophila virilis GJ22727 (Dvir\GJ22727)...   848    0.0   
gb|AF300294.1|AF300294  Drosophila melanogaster dystrophin-lik...   846    0.0   
ref|XM_002096289.1|  Drosophila yakuba GE25609 (Dyak\GE25609),...   842    0.0   
emb|X99703.1|  S.caniculua mRNA for utrophin                        842    0.0   
ref|XM_319450.4|  Anopheles gambiae str. PEST AGAP010261-PA (A...   829    0.0   
ref|XM_002212045.1|  Branchiostoma floridae hypothetical prote...   819    0.0   
gb|DQ440977.1|  Myxine glutinosa dystrophin mRNA, partial cds       810    0.0   
ref|NM_001043260.1|  Drosophila melanogaster dystrophin (Dys),...   803    0.0   
gb|AY875639.1|  Drosophila melanogaster Dp205 mRNA, complete cds    802    0.0   
ref|XM_001633110.1|  Nematostella vectensis predicted protein ...   794    0.0   
gb|EU293093.1|  Synthetic construct murine micro utrophin delt...   790    0.0   
emb|X99757.1|  D.melanogaster mRNA for dystrophin                   788    0.0   
gb|DQ440979.1|  Lampetra planeri dystrophin mRNA, partial cds       770    0.0   
dbj|AK035043.1|  Mus musculus 12 days embryo embryonic body be...   739    0.0   
ref|XM_962494.2|  PREDICTED: Tribolium castaneum similar to dy...   758    0.0   
emb|X99701.1|  X.laevis mRNA for utrophin                           745    0.0   
ref|NM_001005246.1|  Rattus norvegicus dystrophin, muscular dy...   731    0.0   
dbj|AK299936.1|  Homo sapiens cDNA FLJ60143 complete cds, high...   731    0.0   
gb|AY326949.1|  Rattus norvegicus dystrophin Dp71c (Dmd) mRNA,...   729    0.0   
dbj|AK087829.1|  Mus musculus 2 days pregnant adult female ova...   724    0.0   
dbj|AK075809.1|  Mus musculus 10 day old male pancreas cDNA, R...   724    0.0   
ref|NM_004019.2|  Homo sapiens dystrophin (DMD), transcript va...   723    0.0   
emb|X69767.1|  R.norvegicus mRNA for APO-dystrophin-3               719    0.0   
ref|XM_694837.3|  PREDICTED: Danio rerio similar to putative u...   711    0.0   
gb|AF339032.1|AF339032  Danio rerio dystrophin variant Dp71 (d...   689    0.0   
emb|X15488.1|  Human mRNA fragment for dystrophin-related protein   689    0.0   
dbj|AB209305.1|  Homo sapiens mRNA for dystrophin related prot...   683    0.0   
emb|X99736.1|  B.lanceolatum mRNA for dystrophin-like protein       669    0.0   
ref|NM_001043262.1|  Drosophila melanogaster dystrophin (Dys),...   664    0.0   
gb|BT010020.1|  Drosophila melanogaster RE11449 full insert cDNA    664    0.0   
ref|XM_002102789.1|  Drosophila simulans GD19295 (Dsim\GD19295...   662    0.0   
ref|XM_002043269.1|  Drosophila sechellia GM26846 (Dsec\GM2684...   658    0.0   
ref|XM_001652092.1|  Aedes aegypti dystrophin partial mRNA          657    0.0   
gb|BC036095.1|  Homo sapiens cDNA clone IMAGE:5300319, contain...   421    0.0   
dbj|AK149002.1|  Mus musculus 2 days neonate sympathetic gangl...   648    0.0   
ref|XM_002138048.1|  Drosophila pseudoobscura pseudoobscura GA...   645    0.0   
ref|XM_002019869.1|  Drosophila persimilis GL12656 (Dper\GL126...   644    0.0   
ref|XM_001096514.1|  PREDICTED: Macaca mulatta dystrophin (DMD...   630    2e-177
ref|XM_002162901.1|  PREDICTED: Hydra magnipapillata similar t...   629    3e-177
gb|U43518.1|GSU43518  Gobius sp. dystrophin-related protein 2 ...   626    3e-176
emb|X99737.1|  Asteroidea sp. mRNA for dystrophin-like protein      625    5e-176
gb|U43520.1|MMU43520  Mus musculus dystrophin-related protein ...   625    7e-176
ref|XM_001900989.1|  Brugia malayi Zinc finger, ZZ type family...   623    2e-175
emb|X99738.1|  Pectinidae sp. mRNA for dystrophin-like protein      621    7e-175
dbj|AK173373.1|  Ciona intestinalis cDNA, clone:cicl022e20, fu...   607    1e-170
dbj|AK222319.1|  Ciona intestinalis cDNA, clone:cibd066b03, fu...   606    2e-170
ref|XM_002129566.1|  PREDICTED: Ciona intestinalis similar to ...   605    5e-170
ref|XM_695636.3|  PREDICTED: Danio rerio similar to putative u...   581    1e-162
ref|XR_026973.1|  PREDICTED: Gallus gallus similar to dystroph...   570    2e-159
emb|AJ012469.1|  Caenorhabditis elegans mRNA for DYS-1 protein...   561    6e-157
ref|NM_060545.5|  Caenorhabditis elegans DYStrophin related fa...   561    9e-157
dbj|AK013510.1|  Mus musculus adult male hippocampus cDNA, RIK...   540    2e-150
emb|CU688550.1|  Synthetic construct Homo sapiens gateway clon...   535    6e-149
ref|XM_002116057.1|  Trichoplax adhaerens hypothetical protein...   508    1e-140
gb|BC060605.1|  Mus musculus dystrophin related protein 2, mRN...   496    2e-137
emb|X99756.1|  Ciona intestinalis mRNA for dystrophin               454    2e-124
dbj|AK173384.1|  Ciona intestinalis cDNA, clone:cieg020h09, fu...   252    8e-113
gb|EZ022163.1|  TSA: Acropora millepora SeqIndex3528, mRNA seq...   342    1e-90 
emb|CU688551.1|  Synthetic construct Homo sapiens gateway clon...   328    1e-86 
ref|XM_001256720.2|  PREDICTED: Bos taurus similar to dystroph...   320    3e-84 
ref|XM_001637080.1|  Nematostella vectensis predicted protein ...   315    7e-83 
ref|XM_002237128.1|  Branchiostoma floridae hypothetical prote...   312    8e-82 
ref|XM_696118.3|  PREDICTED: Danio rerio similar to putative u...   302    7e-79 
gb|EZ014006.1|  TSA: Acropora millepora SeqIndex16792, mRNA se...   189    3e-78 
ref|XM_002189011.1|  PREDICTED: Taeniopygia guttata similar to...   299    7e-78 
gb|AY566609.1|  Canis familiaris dystrophin Dp71 isoform (DMD)...   288    1e-74 
ref|XM_002237465.1|  Branchiostoma floridae hypothetical prote...   279    7e-72 
dbj|AB011666.1|  Rattus norvegicus mRNA for utrophin, partial cds   257    3e-65 
gb|DQ831005.1|  Danio rerio G-utrophin pseudogene mRNA, partia...   246    6e-62 
dbj|AK034383.1|  Mus musculus adult male diencephalon cDNA, RI...   245    1e-61 
ref|XM_002114182.1|  Trichoplax adhaerens hypothetical protein...   243    5e-61 
gb|DQ431250.1|  Schistosoma mansoni dystrophin mRNA, partial cds    232    1e-57 
gb|AF435589.1|AF435589  Eptatretus stouti dystrophin-like prot...   226    9e-56 
gb|AE014297.2|  Drosophila melanogaster chromosome 3R, complet...   170    1e-54 
gb|AC008192.8|AC008192  Drosophila melanogaster, chromosome 3R...   170    1e-54 
gb|AC007815.7|AC007815  Drosophila melanogaster, chromosome 3R...   170    1e-54 
ref|XM_001742610.1|  Monosiga brevicollis MX1 predicted protei...   217    3e-53 
gb|L06945.1|FSCTYRDYS  Torpedo californica postsynaptic membra...   210    4e-51 
ref|XM_001368984.1|  PREDICTED: Monodelphis domestica similar ...   209    6e-51 
ref|XM_001515642.1|  PREDICTED: Ornithorhynchus anatinus simil...   206    5e-50 
ref|XM_001369015.1|  PREDICTED: Monodelphis domestica similar ...   206    5e-50 
gb|DQ516343.1|  Danio rerio alpha-dystrobrevin splice variant ...   206    1e-49 
gb|DQ516344.1|  Danio rerio alpha-dystrobrevin splice variant ...   204    2e-49 
ref|XM_001515599.1|  PREDICTED: Ornithorhynchus anatinus simil...   204    3e-49 
ref|NM_032975.3|  Homo sapiens dystrobrevin, alpha (DTNA), tra...   202    9e-49 
ref|XM_001368953.1|  PREDICTED: Monodelphis domestica similar ...   201    3e-48 
ref|XM_001359998.2|  Drosophila pseudoobscura pseudoobscura GA...   200    5e-48 
ref|XM_002019867.1|  Drosophila persimilis GL12655 (Dper\GL126...   200    5e-48 
ref|XM_001639844.1|  Nematostella vectensis predicted protein ...   199    8e-48 
dbj|AB209102.1|  Homo sapiens mRNA for dystrobrevin alpha isof...   199    8e-48 
dbj|AB463020.1|  Synthetic construct DNA, clone: pF1KB3754, Ho...   199    9e-48 
gb|EU831672.1|  Synthetic construct Homo sapiens clone HAIB:10...   199    1e-47 
emb|AL833285.1|  Homo sapiens mRNA; cDNA DKFZp451O128 (from cl...   197    3e-47 
dbj|AK147359.1|  Mus musculus cDNA, RIKEN full-length enriched...   196    5e-47 
dbj|AK147279.1|  Mus musculus cDNA, RIKEN full-length enriched...   196    6e-47 
gb|EU831587.1|  Synthetic construct Homo sapiens clone HAIB:10...   196    8e-47 
ref|NM_207650.3|  Mus musculus dystrobrevin alpha (Dtna), tran...   194    4e-46 
gb|BC040364.1|  Mus musculus dystrobrevin alpha, mRNA (cDNA cl...   194    4e-46 
ref|XM_002212046.1|  Branchiostoma floridae hypothetical prote...   193    4e-46 
gb|AY525164.1|  Gallus gallus clone Dp71shoA putative short dy...   193    5e-46 
dbj|AK131649.1|  Mus musculus adult male cerebellum cDNA, RIKE...   193    5e-46 
gb|AF063193.1|AF063193  Gallus gallus dystrophin mRNA, partial...   193    5e-46 
gb|U46744.1|HSU46744  Human dystrobrevin-alpha mRNA, complete cds   192    8e-46 
ref|XM_001369093.1|  PREDICTED: Monodelphis domestica similar ...   192    1e-45 
ref|XM_613774.4|  PREDICTED: Bos taurus similar to dystrobrevi...   191    2e-45 
ref|XM_001054487.1|  PREDICTED: Rattus norvegicus similar to d...   191    2e-45 
ref|XM_001054433.1|  PREDICTED: Rattus norvegicus similar to d...   191    2e-45 
ref|XM_001054380.1|  PREDICTED: Rattus norvegicus similar to d...   191    2e-45 
ref|XM_001054793.1|  PREDICTED: Rattus norvegicus similar to d...   191    2e-45 
gb|AF082741.1|AF082741  Gallus gallus dystrophin mRNA, alterna...   191    3e-45 
gb|BC068718.1|  Xenopus laevis hypothetical protein MGC81161, ...   190    5e-45 
gb|BC121459.1|  Xenopus tropicalis dystrobrevin alpha, mRNA (c...   189    6e-45 
ref|XM_419187.2|  PREDICTED: Gallus gallus similar to dystrobr...   189    7e-45 
gb|BC050765.1|  Mus musculus dystrobrevin alpha, mRNA (cDNA cl...   189    8e-45 
ref|XM_002196755.1|  PREDICTED: Taeniopygia guttata similar to...   189    1e-44 
emb|X95226.1|  M.musculus mRNA for dystrobrevin (clone m24)         189    1e-44 
ref|XM_001054655.1|  PREDICTED: Rattus norvegicus similar to d...   188    2e-44 
ref|NM_033148.2|  Homo sapiens dystrobrevin, beta (DTNB), tran...   188    2e-44 
emb|Y12712.1|  Homo sapiens mRNA for brain dystrobrevin B           188    2e-44 
dbj|AK308410.1|  Homo sapiens cDNA, FLJ98358                        175    2e-44 
ref|XM_001515647.1|  PREDICTED: Ornithorhynchus anatinus simil...   187    2e-44 
emb|CR619470.1|  full-length cDNA clone CS0DK002YG20 of HeLa c...   187    3e-44 
ref|XM_961904.2|  PREDICTED: Tribolium castaneum similar to dy...   187    4e-44 
ref|XM_001788826.1|  PREDICTED: Bos taurus dystrobrevin, alpha...   186    8e-44 
gb|BT009805.1|  Homo sapiens dystrobrevin, beta mRNA, complete...   186    8e-44 
gb|AY889125.1|  Synthetic construct Homo sapiens clone FLH1098...   186    8e-44 
gb|AY889124.1|  Synthetic construct Homo sapiens clone FLH1098...   186    8e-44 
gb|AY889123.1|  Synthetic construct Homo sapiens clone FLH1098...   186    8e-44 
ref|NM_183361.1|  Homo sapiens dystrobrevin, beta (DTNB), tran...   186    1e-43 
gb|BC016655.1|  Homo sapiens dystrobrevin, beta, mRNA (cDNA cl...   186    1e-43 
ref|XM_547610.2|  PREDICTED: Canis familiaris similar to dystr...   185    2e-43 
gb|U26744.1|HSU26744  Human dystrobrevin-gamma mRNA, complete cds   184    2e-43 
emb|X95227.1|  M.musculus mRNA for dystrobrevin (clone m32)         184    2e-43 
ref|NM_032979.4|  Homo sapiens dystrobrevin, alpha (DTNA), tra...   184    3e-43 
dbj|AK019477.1|  Mus musculus 0 day neonate skin cDNA, RIKEN f...   184    3e-43 
gb|DQ516346.1|  Danio rerio gamma-dystrobrevin (GDTN) mRNA, co...   184    3e-43 
ref|XM_512087.2|  PREDICTED: Pan troglodytes dystrobrevin alph...   184    3e-43 
ref|XM_001495981.1|  PREDICTED: Equus caballus dystrobrevin, a...   184    3e-43 
ref|XM_001369068.1|  PREDICTED: Monodelphis domestica similar ...   184    4e-43 
ref|NM_001390.4|  Homo sapiens dystrobrevin, alpha (DTNA), tra...   184    4e-43 
ref|XM_001054112.1|  PREDICTED: Rattus norvegicus similar to d...   183    5e-43 
ref|XM_001102769.1|  PREDICTED: Macaca mulatta similar to dyst...   183    6e-43 
ref|XM_001369046.1|  PREDICTED: Monodelphis domestica similar ...   182    8e-43 
emb|X65468.1|  R.norvegicus mRNA for apodystrophin-I                182    8e-43 
ref|XM_001054548.1|  PREDICTED: Rattus norvegicus similar to d...   182    9e-43 
gb|L05649.1|HUMDYSTR15  Homo sapiens dystrophin (DMD) gene, ex...   182    1e-42 
dbj|AK291156.1|  Homo sapiens cDNA FLJ77455 complete cds, high...   181    3e-42 
gb|AC079177.21|  Homo sapiens Xp BAC RP11-147B14 (Roswell Park...   180    4e-42 
ref|XM_001054600.1|  PREDICTED: Rattus norvegicus similar to d...   180    5e-42 
ref|XM_001843534.1|  Culex quinquefasciatus dystrobrevin, mRNA      178    2e-41 
ref|XM_001650730.1|  Aedes aegypti dystrobrevin partial mRNA        178    2e-41 
ref|XM_001975870.1|  Drosophila erecta GG20305 (Dere\GG20305),...   177    2e-41 
ref|XM_002004299.1|  Drosophila mojavensis GI19671 (Dmoj\GI196...   177    2e-41 
ref|NM_001032237.1|  Drosophila melanogaster Dystrobrevin-like...   177    3e-41 
ref|NM_165905.2|  Drosophila melanogaster Dystrobrevin-like (D...   177    3e-41 
ref|XM_002081157.1|  Drosophila simulans GD10888 (Dsim\GD10888...   177    3e-41 
ref|NM_165904.1|  Drosophila melanogaster Dystrobrevin-like (D...   177    4e-41 
ref|NM_001032236.1|  Drosophila melanogaster Dystrobrevin-like...   177    4e-41 
ref|XM_002091011.1|  Drosophila yakuba GE12465 (Dyak\GE12465),...   177    4e-41 
gb|AF277387.2|AF277387  Drosophila melanogaster dystrobrevin-l...   177    4e-41 
ref|XM_001604052.1|  PREDICTED: Nasonia vitripennis similar to...   177    5e-41 
ref|NM_078988.2|  Drosophila melanogaster Dystrobrevin-like (D...   177    5e-41 
ref|XM_001958633.1|  Drosophila ananassae GF12513 (Dana\GF1251...   176    5e-41 
ref|XM_002059767.1|  Drosophila virilis GJ15037 (Dvir\GJ15037)...   176    6e-41 
ref|NM_001103817.1|  Drosophila melanogaster Dystrobrevin-like...   175    1e-40 
gb|DQ516345.1|  Danio rerio beta-dystrobrevin (BDTN) mRNA, com...   175    1e-40 
ref|XM_002033526.1|  Drosophila sechellia GM21392 (Dsec\GM2139...   175    1e-40 
ref|XM_395141.3|  PREDICTED: Apis mellifera similar to Dystrob...   175    1e-40 
ref|XM_001191124.1|  PREDICTED: Strongylocentrotus purpuratus ...   175    1e-40 
ref|XM_792154.2|  PREDICTED: Strongylocentrotus purpuratus sim...   175    1e-40 
ref|XM_002187356.1|  PREDICTED: Taeniopygia guttata similar to...   174    2e-40 
ref|XM_001987489.1|  Drosophila grimshawi GH21967 (Dgri\GH2196...   174    2e-40 
ref|XM_001948373.1|  PREDICTED: Acyrthosiphon pisum similar to...   174    3e-40 
emb|BX323090.7|  Zebrafish DNA sequence from clone CH211-274B7...   101    1e-39 
emb|AL645857.11|  Mouse DNA sequence from clone RP23-167N2 on ...   171    3e-39 
gb|AY423026.1|  Danio rerio dystrobrevin, beta (DTNB) mRNA, co...   170    4e-39 
ref|XM_001054726.1|  PREDICTED: Rattus norvegicus similar to d...   170    4e-39 
gb|M86899.1|HUMDYST16  H.sapiens dystrophin gene, exon 75           170    4e-39 
ref|XM_001089125.1|  PREDICTED: Macaca mulatta similar to dyst...   170    5e-39 
gb|AC193904.3|  Pan troglodytes BAC clone CH251-277B20 from ch...   169    9e-39 
emb|CT573323.2|  CH251-58D24, complete sequence                     169    9e-39 
gb|AC078958.30|  Homo sapiens X BAC RP11-609C15 (Roswell Park ...   169    9e-39 
emb|CT573090.2|  RP43-052E01, complete sequence                     169    9e-39 
emb|AL645477.8|  Mouse DNA sequence from clone RP23-155L18 on ...   168    2e-38 
ref|XM_001361515.2|  Drosophila pseudoobscura pseudoobscura GA...   167    5e-38 
ref|XM_001502889.1|  PREDICTED: Equus caballus dystrobrevin, b...   166    6e-38 
ref|XM_540111.2|  PREDICTED: Canis familiaris similar to dystr...   166    1e-37 
emb|AJ003007.1|  Mus musculus mRNA for beta-dystrobrevin            166    1e-37 
ref|NM_001391.5|  Homo sapiens dystrobrevin, alpha (DTNA), tra...   165    1e-37 
dbj|AK043436.1|  Mus musculus 7 days neonate cerebellum cDNA, ...   165    1e-37 
gb|BC030924.1|  Mus musculus dystrobrevin, beta, mRNA (cDNA cl...   165    2e-37 
gb|DQ160290.1|  Homo sapiens dystrobrevin beta isoform 6 (DTNB...   164    2e-37 
emb|Y15718.1|  Homo sapiens mRNA for dystrobrevin B DTN-B2          164    2e-37 
emb|Y15722.1|  Homo sapiens mRNA for dystrobrevin B DTN-B1          164    2e-37 
ref|XM_001621487.1|  Nematostella vectensis predicted protein ...   164    3e-37 
gb|AF143543.1|AF143543  Mus musculus alpha-dystrobrevin 2a mRN...   164    3e-37 
gb|AF143544.1|AF143544  Mus musculus alpha-dystrobrevin 2b mRN...   164    3e-37 
ref|XM_515336.2|  PREDICTED: Pan troglodytes dystrobrevin, bet...   164    3e-37 
dbj|AK300019.1|  Homo sapiens cDNA FLJ60874 complete cds, high...   164    3e-37 
ref|NM_021907.3|  Homo sapiens dystrobrevin, beta (DTNB), tran...   164    3e-37 
ref|NM_033147.2|  Homo sapiens dystrobrevin, beta (DTNB), tran...   164    3e-37 
ref|NM_183360.1|  Homo sapiens dystrobrevin, beta (DTNB), tran...   164    3e-37 
gb|AF022728.1|AF022728  Homo sapiens beta-dystrobrevin (BDTN) ...   164    3e-37 
gb|BC081889.1|  Rattus norvegicus dystrobrevin, beta, mRNA (cD...   164    4e-37 
emb|Y15742.1|  Mus musculus mRNA for dystrobrevin B, partial        163    5e-37 
gb|BC049366.1|  Homo sapiens dystrobrevin, beta, mRNA (cDNA cl...   163    7e-37 
gb|U46745.1|HSU46745  Human dystrobrevin-beta mRNA, complete cds    163    7e-37 
ref|NM_058459.4|  Caenorhabditis elegans DYstroBrevin homolog ...   162    8e-37 
emb|AJ131742.1|  Caenorhabditis elegans mRNA for dystrobrevin       162    9e-37 
ref|XM_001380100.1|  PREDICTED: Monodelphis domestica similar ...   162    9e-37 
ref|NM_032978.6|  Homo sapiens dystrobrevin, alpha (DTNA), tra...   162    1e-36 
dbj|AK301386.1|  Homo sapiens cDNA FLJ58632 complete cds, high...   162    1e-36 
ref|XM_001667709.1|  Caenorhabditis briggsae hypothetical prot...   161    2e-36 
ref|XM_001054053.1|  PREDICTED: Rattus norvegicus similar to d...   161    3e-36 
ref|XM_001054243.1|  PREDICTED: Rattus norvegicus similar to d...   160    3e-36 
tpd|BR000175.1|  TPA: TPA_exp: Ciona intestinalis Ci-ZF(ZZ)-4 ...   159    8e-36 
gb|DQ516347.1|  Homo sapiens dystrotelin mRNA, complete cds         158    2e-35 
dbj|AK020881.1|  Mus musculus adult retina cDNA, RIKEN full-le...   158    2e-35 
ref|XM_001787345.1|  PREDICTED: Bos taurus similar to Dystrote...   154    4e-34 
gb|S60973.1|  dystrophin {out-of-frame deletion of exon 50} [h...   154    4e-34 
gb|M63072.1|HUMDMDC  Human Duchenne muscular dystrophy protein...   154    4e-34 
gb|BC046265.1|  Xenopus laevis dystrobrevin, alpha, mRNA (cDNA...   151    2e-33 
emb|AJ544617.1|  Takifugu rubripes dmd gene for putative dystr...   150    4e-33 
ref|XM_002245696.1|  Branchiostoma floridae hypothetical prote...   150    5e-33 
gb|EF120476.1|  Schistosoma bovis dystrophin mRNA, partial cds      149    7e-33 
emb|AJ544616.1|  Takifugu rubripes dmd gene for putative dystr...   149    8e-33 
gb|EF120477.1|  Schistosoma haematobium dystrophin mRNA, parti...   149    8e-33 
gb|AC093167.11|  Homo sapiens Xp BAC RP11-593P4 (Roswell Park ...   146    9e-32 
gb|AF213438.1|AF213438  Homo sapiens dystrophin (DMD) gene, ex...   146    9e-32 
gb|AC193238.3|  Pan troglodytes BAC clone CH251-308A5 from chr...   145    1e-31 
emb|CT476801.2|  RP43-004N07, complete sequence                     145    1e-31 
emb|CR972866.3|  RP43-009N23, complete sequence                     145    1e-31 
emb|CT485784.2|  RP43-026J01, complete sequence                     145    1e-31 
ref|XM_002017724.1|  Drosophila persimilis GL17134 (Dper\GL171...   144    2e-31 
gb|AC193178.3|  Pan troglodytes BAC clone CH251-299A18 from ch...   143    7e-31 
emb|CU302226.2|  CH251-299A18, complete sequence                    143    7e-31 
gb|BC150093.1|  Bos taurus cDNA clone IMAGE:8324137                 142    1e-30 
ref|XM_001918076.1|  PREDICTED: Equus caballus dystrotelin (DY...   142    1e-30 
gb|M86889.1|HUMDYST06  H.sapiens dystrophin gene, exon 65           142    1e-30 
dbj|AK083752.1|  Mus musculus 9 days embryo whole body cDNA, R...   141    2e-30 
gb|BC078203.1|  Danio rerio dystrobrevin, gamma, mRNA (cDNA cl...   141    2e-30 
gb|S62620.1|  (mdx3Cv)=dystrophin gene {5'region, alternativel...   140    3e-30 
ref|XM_002066076.1|  Drosophila willistoni GK22187 (Dwil\GK221...   140    7e-30 
gb|AF043067.1|AF043067  Gallus gallus dystrophin mRNA, alterna...   139    1e-29 
emb|AJ720148.1|  Gallus gallus mRNA for hypothetical protein, ...   138    2e-29 
gb|BT011443.1|  Drosophila melanogaster RE48865 full insert cDNA    137    3e-29 
gb|AF533682.1|  Homo sapiens IL1RAPL1/dystrophin fusion protei...   137    3e-29 
gb|DQ443726.1|  Danio rerio dystrotelin mRNA, complete cds          137    3e-29 
gb|BC118294.1|  Bos taurus dystrobrevin, alpha, mRNA (cDNA clo...   137    6e-29 
ref|NM_010087.3|  Mus musculus dystrobrevin alpha (Dtna), tran...   135    1e-28 
dbj|AK003829.2|  Mus musculus 18-day embryo whole body cDNA, R...   135    1e-28 
gb|AF143542.1|AF143542  Mus musculus alpha-dystrobrevin 3 mRNA...   135    1e-28 
gb|BT006937.1|  Homo sapiens dystrobrevin, alpha mRNA, complet...   135    2e-28 
ref|NM_001392.4|  Homo sapiens dystrobrevin, alpha (DTNA), tra...   135    2e-28 
gb|U26742.1|HSU26742  Human dystrobrevin-delta mRNA, complete cds   135    2e-28 
gb|EU831619.1|  Synthetic construct Homo sapiens clone HAIB:10...   135    2e-28 
emb|AJ009668.1|  Homo sapiens mRNA for alpha-dystrobrevin-3         135    2e-28 
ref|NM_001128175.1|  Homo sapiens dystrobrevin, alpha (DTNA), ...   134    2e-28 
gb|BC005300.1|  Homo sapiens dystrobrevin, alpha, mRNA (cDNA c...   134    2e-28 
emb|CR611269.1|  full-length cDNA clone CS0DN002YF11 of Adult ...   134    3e-28 
gb|BT007812.1|  Synthetic construct Homo sapiens dystrobrevin,...   134    3e-28 
gb|EU831705.1|  Synthetic construct Homo sapiens clone HAIB:10...   134    3e-28 
ref|XM_426570.2|  PREDICTED: Gallus gallus similar to dystroph...   134    4e-28 
emb|BX004756.7|  Zebrafish DNA sequence from clone CH211-59A4 ...   133    5e-28 
gb|AC094963.9|  Rattus norvegicus X BAC CH230-6L20 (Children's...   132    2e-27 
gb|M86892.1|HUMDYST09  H.sapiens dystrophin gene, exon 68           130    5e-27 
gb|DQ443727.1|  Mus musculus dystrotelin mRNA, complete cds         130    5e-27 
ref|XM_001606073.1|  PREDICTED: Nasonia vitripennis similar to...   130    6e-27 
emb|AL806516.4|  Mouse DNA sequence from clone RP23-453N20 on ...   130    7e-27 
emb|AJ544612.1|  Takifugu rubripes dmd gene for putative dystr...  78.2    9e-27 
gb|AF213440.1|AF213440  Homo sapiens dystrophin (DMD) gene, ex...   129    1e-26 
gb|AC079175.24|  Homo sapiens Xp BAC RP11-122N14 (Roswell Park...   129    1e-26 
gb|AY525165.1|  Gallus gallus clone Dp71shoB putative short dy...   128    2e-26 
ref|XM_001892815.1|  Brugia malayi Zinc finger, ZZ type family...   128    2e-26 
gb|EF473649.1|  Danio rerio utrophin-like mRNA, partial sequence    127    5e-26 
dbj|AB171279.1|  Macaca fascicularis brain cDNA clone: QorA-13...   113    7e-26 
dbj|AK094494.1|  Homo sapiens cDNA FLJ37175 fis, clone BRACE20...  79.3    4e-25 
emb|AJ544620.1|  Takifugu rubripes utrn gene for putative utro...  95.5    9e-25 
gb|AC152831.2|  Ornithorhynchus anatinus chromosome UNK clone ...  73.6    2e-24 
gb|DQ788696.1|  Danio rerio utrophin isoform G mRNA, partial c...   121    3e-24 
dbj|AK240524.1|  Sus scrofa mRNA, clone:UTR010089D01, expresse...   120    5e-24 
gb|L05647.1|HUMDYSTR13  Homo sapiens dystrophin (DMD) gene, ex...   120    6e-24 
dbj|AK294357.1|  Homo sapiens cDNA FLJ57272 complete cds, high...   107    7e-24 
gb|DQ431251.1|  Schistosoma mansoni dystrobrevin mRNA, complet...   118    3e-23 
gb|M86891.1|HUMDYST08  H.sapiens dystrophin gene, exon 67           117    5e-23 
emb|AL844151.3|  Mouse DNA sequence from clone RP23-73O7 on ch...   116    6e-23 
emb|CR622461.1|  full-length cDNA clone CS0DB006YJ19 of Neurob...   116    8e-23 
gb|AC156952.22|  Mus musculus 10 BAC RP24-385D2 (Roswell Park ...   115    2e-22 
gb|AC153893.3|  Mus musculus 10 BAC RP23-124O20 (Roswell Park ...   115    2e-22 
gb|L04186.1|HUMDYSDMD  Homo sapiens dystrophin (DMD) gene, exo...   114    2e-22 
gb|L22094.1|MUSUTROPH  Mouse utrophin (Dmd1) gene, one complet...   114    3e-22 
gb|AC079864.22|  Homo sapiens Xp BAC RP11-662G16 (Roswell Park...   114    3e-22 
gb|AF213436.1|AF213436  Homo sapiens dystrophin (DMD) gene, ex...   114    3e-22 
emb|X51934.1|  Human dystrophin gene, exon 51 with flanking se...   114    3e-22 
gb|M65035.1|HUMDYSGP  Human dystrophin gene deletion junction ...   114    3e-22 
emb|AL357149.13|  Human DNA sequence from clone RP11-352E13 on...   114    3e-22 
emb|X16089.1|  Human Cf56a/Cf23a region DNA for an exon of Duc...   114    4e-22 
gb|S38776.1|  Homo sapiens dystrophin (DMD) mRNA, partial cds,...   112    1e-21 
emb|CR954286.2|  Pan troglodytes chromosome X BAC RP43-001A02,...   112    1e-21 
emb|AL513184.7|  Human DNA sequence from clone RP11-386H19 on ...   112    2e-21 
gb|AC187490.2|  Rhesus macaque BAC clone CH250-77H12 from chro...   111    2e-21 
gb|AY390386.1|  Rattus norvegicus dystrophin-related mRNA, par...   111    3e-21 
emb|Z81522.1|  Caenorhabditis elegans Cosmid F32B4, complete s...   110    3e-21 
gb|AC112800.6|  Rattus norvegicus X BAC CH230-275F1 (Children'...   110    4e-21 
gb|DQ788695.1|  Danio rerio dystrophin isoform Dp116 mRNA, par...   110    4e-21 
gb|AF213439.1|AF213439  Homo sapiens dystrophin (DMD) gene, ex...   109    1e-20 
gb|M86898.1|HUMDYST15  H.sapiens dystrophin gene, exon 74           107    3e-20 
gb|U01229.1|U01229  Torpedo californica dystrophin mRNA, parti...   107    4e-20 
dbj|AK296450.1|  Homo sapiens cDNA FLJ56097 complete cds, high...   107    6e-20 
gb|AC192936.3|  Pan troglodytes BAC clone CH251-433G11 from ch...   103    5e-19 
emb|CR955037.3|  Pan troglodytes chromosome X BAC RP43-016I09,...   103    5e-19 
gb|M86884.1|HUMDYST01  H.sapiens dystrophin gene, exon 60           103    5e-19 
ref|XM_968674.2|  PREDICTED: Tribolium castaneum similar to ka...   102    1e-18 
gb|AE013599.4|  Drosophila melanogaster chromosome 2R, complet...  81.6    1e-18 
gb|AC007356.8|AC007356  Drosophila melanogaster, chromosome 2R...  81.6    1e-18 
gb|AC007476.5|AC007476  Drosophila melanogaster, chromosome 2R...  81.6    1e-18 
emb|Z11860.1|  H.sapiens gene encoding dystrophin, exon 60          101    2e-18 
ref|XM_001946815.1|  PREDICTED: Acyrthosiphon pisum similar to...   101    3e-18 
gb|AF213442.1|AF213442  Homo sapiens dystrophin (DMD) gene, ex...   101    3e-18 
gb|M86894.1|HUMDYST11  H.sapiens dystrophin gene, exon 70           101    3e-18 
ref|XM_001195605.1|  PREDICTED: Strongylocentrotus purpuratus ...  98.6    2e-17 
emb|CT027835.13|  Zebrafish DNA sequence from clone CH211-66E1...  97.8    3e-17 
emb|BX510641.9|  Zebrafish DNA sequence from clone CH211-106M9...  97.4    4e-17 
emb|BX511121.15|  Zebrafish DNA sequence from clone DKEYP-110A...  97.4    5e-17 
gb|M86893.1|HUMDYST10  H.sapiens dystrophin gene, exon 69          96.3    1e-16 
ref|XM_001365106.1|  PREDICTED: Monodelphis domestica similar ...  95.5    2e-16 
gb|AF070567.1|AF070567  Homo sapiens clone 24544 beta-dystrobr...  92.8    1e-15 
ref|XM_001515580.1|  PREDICTED: Ornithorhynchus anatinus simil...  92.8    1e-15 
ref|XM_001084824.1|  PREDICTED: Macaca mulatta similar to dyst...  92.8    1e-15 
dbj|AK294174.1|  Homo sapiens cDNA FLJ60475 complete cds, high...  92.4    1e-15 
dbj|AK225724.1|  Homo sapiens mRNA for dystrobrevin, beta isof...  92.4    1e-15 
ref|XM_002221469.1|  Branchiostoma floridae hypothetical prote...  92.0    2e-15 
emb|AL672064.17|  Mouse DNA sequence from clone RP23-91G19 on ...  90.5    5e-15 
ref|XM_002221736.1|  Branchiostoma floridae hypothetical prote...  90.1    6e-15 
ref|XM_001505526.1|  PREDICTED: Ornithorhynchus anatinus simil...  89.7    9e-15 
ref|XM_002205053.1|  Branchiostoma floridae hypothetical prote...  89.4    1e-14 
ref|XM_684808.3|  PREDICTED: Danio rerio similar to dystonin (...  89.0    2e-14 
emb|Z68331.3|  Human DNA sequence from clone GHc-521F8 on chro...  88.6    2e-14 
gb|AC194760.4|  Pan troglodytes BAC clone CH251-694P16 from ch...  88.2    2e-14 
ref|XR_024528.1|  PREDICTED: Pan troglodytes similar to dyston...  88.2    3e-14 
dbj|AB018271.2|  Homo sapiens mRNA for KIAA0728 protein, parti...  88.2    3e-14 
ref|NM_001144771.1|  Homo sapiens dystonin (DST), transcript v...  87.8    4e-14 
ref|NM_001144770.1|  Homo sapiens dystonin (DST), transcript v...  87.8    4e-14 
ref|NM_001144769.1|  Homo sapiens dystonin (DST), transcript v...  87.8    4e-14 
ref|NM_183380.2|  Homo sapiens dystonin (DST), transcript vari...  87.8    4e-14 
ref|NM_015548.3|  Homo sapiens dystonin (DST), transcript vari...  87.8    4e-14 
ref|XM_001995054.1|  Drosophila grimshawi GH22959 (Dgri\GH2295...  87.4    4e-14 
gb|AF213443.1|AF213443  Homo sapiens dystrophin (DMD) gene, ex...  87.4    4e-14 
gb|AF400226.1|  Homo sapiens bullous pemphigoid antigen 1 eA (...  86.7    7e-14 
emb|CU677663.1|  Synthetic construct Homo sapiens gateway clon...  86.7    8e-14 
ref|XM_001252266.1|  PREDICTED: Bos taurus similar to dystonin...  86.3    1e-13 
ref|XM_615341.3|  PREDICTED: Bos taurus similar to dystonin, t...  86.3    1e-13 
ref|XM_861695.1|  PREDICTED: Canis familiaris dystonin, transc...  86.3    1e-13 
emb|AJ544618.1|  Takifugu rubripes utrn gene for putative utro...  65.1    1e-13 
ref|XM_861613.1|  PREDICTED: Canis familiaris dystonin, transc...  85.9    1e-13 
ref|XM_861601.1|  PREDICTED: Canis familiaris dystonin, transc...  85.9    1e-13 
ref|XM_861627.1|  PREDICTED: Canis familiaris dystonin, transc...  85.9    1e-13 
ref|XM_861585.1|  PREDICTED: Canis familiaris dystonin, transc...  85.9    1e-13 
ref|XM_861669.1|  PREDICTED: Canis familiaris dystonin, transc...  85.9    1e-13 
ref|XM_861540.1|  PREDICTED: Canis familiaris dystonin, transc...  85.9    1e-13 
ref|XM_861682.1|  PREDICTED: Canis familiaris dystonin, transc...  85.9    1e-13 
ref|XM_861654.1|  PREDICTED: Canis familiaris dystonin, transc...  85.9    1e-13 
ref|XM_532183.2|  PREDICTED: Canis familiaris dystonin, transc...  85.9    1e-13 
ref|XM_861733.1|  PREDICTED: Canis familiaris dystonin, transc...  85.5    2e-13 
ref|XM_861720.1|  PREDICTED: Canis familiaris dystonin, transc...  85.5    2e-13 
ref|XM_861709.1|  PREDICTED: Canis familiaris dystonin, transc...  85.5    2e-13 
ref|XM_861528.1|  PREDICTED: Canis familiaris dystonin, transc...  85.5    2e-13 
ref|NM_001144187.1|  Drosophila melanogaster short stop (shot)...  85.5    2e-13 
gb|M86900.1|HUMDYST17  H.sapiens dystrophin gene, exon 76          85.5    2e-13 
dbj|AK157158.1|  Mus musculus activated spleen cDNA, RIKEN ful...  85.1    2e-13 
ref|NM_001144188.1|  Drosophila melanogaster short stop (shot)...  85.1    2e-13 
ref|NM_001144185.1|  Drosophila melanogaster short stop (shot)...  85.1    2e-13 
ref|NM_166019.1|  Drosophila melanogaster short stop (shot), t...  85.1    3e-13 

ALIGNMENTS
>ref|NM_004022.2| Homo sapiens dystrophin (DMD), transcript variant D140ab, mRNA
Length=7339

 Score = 2544 bits (6593),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1230/1230 (100%), Positives = 1230/1230 (100%), Gaps = 0/1230 (0%)
 Frame = +1

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  1042  MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  1221

Query  61    EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
             EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  1222  EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  1401

Query  121   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
             DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA
Sbjct  1402  DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  1581

Query  181   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
             NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK
Sbjct  1582  NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  1761

Query  241   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
             FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ
Sbjct  1762  FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  1941

Query  301   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
             KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  1942  KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  2121

Query  361   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
             LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  2122  LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  2301

Query  421   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
             LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ
Sbjct  2302  LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  2481

Query  481   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
             EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR
Sbjct  2482  EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  2661

Query  541   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
             QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  2662  QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  2841

Query  601   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
             WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  2842  WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  3021

Query  661   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
             LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  3022  LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  3201

Query  721   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
             WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  3202  WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  3381

Query  781   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
             SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  3382  SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  3561

Query  841   VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
             VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  3562  VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  3741

Query  901   TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDT  960
             TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDT
Sbjct  3742  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDT  3921

Query  961   HSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQ  1020
             HSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQ
Sbjct  3922  HSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQ  4101

Query  1021  ILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSP  1080
             ILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSP
Sbjct  4102  ILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSP  4281

Query  1081  RDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSS  1140
             RDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSS
Sbjct  4282  RDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSS  4461

Query  1141  PSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGH  1200
             PSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGH
Sbjct  4462  PSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGH  4641

Query  1201  NVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             NVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  4642  NVGSLFHMADDLGRAMESLVSVMTDEEGAE  4731


 Score = 55.5 bits (132),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
 Frame = +1

Query  164  KQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAA  223
            K+L   + Q QT V   N    ++++  S  D   +     ++N  W+ + K++S+R+  
Sbjct  97   KELQDGIGQRQTVVRTLNATGEEIIQQSSKTDASILQEKLGSLNLRWQEVCKQLSDRKKR  276

Query  224  LEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQG  283
            LEE   +L +F  DL +F+ WL EA+  A++  +  ++++L E  + VK L+++    QG
Sbjct  277  LEEQKNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVEELPLRQG  456

Query  284  EIEAHTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEA  342
                   +   L+E    +L S   S ++   L+ +L   N +W ++ +     +  +EA
Sbjct  457  -------ILKQLNETGGPVLVSAPISPEEQDKLENKLKQTNLQWIKVSRALPEKQGEIEA  615

Query  343  SSDQWKRLHLSLQE-------LLVWL  361
                  +L   L++       LL+WL
Sbjct  616  QIKDLGQLEKKLEDLEEQLNHLLLWL  693


>dbj|AB208836.1| Homo sapiens mRNA for dystrophin Dp427c isoform variant protein
Length=6801

 Score = 2538 bits (6579),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1229/1230 (99%), Positives = 1230/1230 (100%), Gaps = 0/1230 (0%)
 Frame = +3

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  489   MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  668

Query  61    EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
             EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  669   EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  848

Query  121   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
             DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA
Sbjct  849   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  1028

Query  181   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
             NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK
Sbjct  1029  NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  1208

Query  241   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
             FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ
Sbjct  1209  FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  1388

Query  301   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
             KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  1389  KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  1568

Query  361   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
             LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  1569  LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  1748

Query  421   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
             LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERL+ELQ
Sbjct  1749  LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLRELQ  1928

Query  481   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
             EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR
Sbjct  1929  EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  2108

Query  541   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
             QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  2109  QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  2288

Query  601   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
             WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  2289  WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  2468

Query  661   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
             LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  2469  LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  2648

Query  721   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
             WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  2649  WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  2828

Query  781   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
             SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  2829  SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  3008

Query  841   VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
             VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  3009  VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  3188

Query  901   TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDT  960
             TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDT
Sbjct  3189  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDT  3368

Query  961   HSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQ  1020
             HSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQ
Sbjct  3369  HSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQ  3548

Query  1021  ILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSP  1080
             ILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSP
Sbjct  3549  ILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSP  3728

Query  1081  RDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSS  1140
             RDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSS
Sbjct  3729  RDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSS  3908

Query  1141  PSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGH  1200
             PSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGH
Sbjct  3909  PSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGH  4088

Query  1201  NVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             NVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  4089  NVGSLFHMADDLGRAMESLVSVMTDEEGAE  4178


>ref|NM_004021.2| Homo sapiens dystrophin (DMD), transcript variant Dp140b, mRNA
Length=7378

 Score = 2534 bits (6569),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1230/1243 (98%), Positives = 1230/1243 (98%), Gaps = 13/1243 (1%)
 Frame = +1

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  1042  MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  1221

Query  61    EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
             EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  1222  EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  1401

Query  121   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
             DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA
Sbjct  1402  DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  1581

Query  181   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
             NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK
Sbjct  1582  NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  1761

Query  241   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
             FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ
Sbjct  1762  FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  1941

Query  301   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
             KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  1942  KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  2121

Query  361   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
             LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  2122  LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  2301

Query  421   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
             LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ
Sbjct  2302  LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  2481

Query  481   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
             EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR
Sbjct  2482  EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  2661

Query  541   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
             QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  2662  QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  2841

Query  601   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
             WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  2842  WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  3021

Query  661   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
             LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  3022  LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  3201

Query  721   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
             WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  3202  WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  3381

Query  781   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
             SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  3382  SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  3561

Query  841   VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
             VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  3562  VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  3741

Query  901   TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
             TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  3742  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  3921

Query  949   -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
              PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  3922  APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  4101

Query  1008  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
             QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  4102  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  4281

Query  1068  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
             SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  4282  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  4461

Query  1128  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
             QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM
Sbjct  4462  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  4641

Query  1188  EQLNNSFPSSRGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             EQLNNSFPSSRGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  4642  EQLNNSFPSSRGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  4770


 Score = 55.8 bits (133),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
 Frame = +1

Query  164  KQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAA  223
            K+L   + Q QT V   N    ++++  S  D   +     ++N  W+ + K++S+R+  
Sbjct  97   KELQDGIGQRQTVVRTLNATGEEIIQQSSKTDASILQEKLGSLNLRWQEVCKQLSDRKKR  276

Query  224  LEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQG  283
            LEE   +L +F  DL +F+ WL EA+  A++  +  ++++L E  + VK L+++    QG
Sbjct  277  LEEQKNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVEELPLRQG  456

Query  284  EIEAHTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEA  342
                   +   L+E    +L S   S ++   L+ +L   N +W ++ +     +  +EA
Sbjct  457  -------ILKQLNETGGPVLVSAPISPEEQDKLENKLKQTNLQWIKVSRALPEKQGEIEA  615

Query  343  SSDQWKRLHLSLQE-------LLVWL  361
                  +L   L++       LL+WL
Sbjct  616  QIKDLGQLEKKLEDLEEQLNHLLLWL  693


>gb|BC150141.1| Homo sapiens dystrophin, mRNA (cDNA clone IMAGE:40124455), complete 
cds
Length=4733

 Score = 2531 bits (6560),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1230/1243 (98%), Positives = 1230/1243 (98%), Gaps = 13/1243 (1%)
 Frame = +2

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  566   MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  745

Query  61    EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
             EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  746   EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  925

Query  121   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
             DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA
Sbjct  926   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  1105

Query  181   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
             NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK
Sbjct  1106  NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  1285

Query  241   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
             FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ
Sbjct  1286  FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  1465

Query  301   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
             KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  1466  KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  1645

Query  361   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
             LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  1646  LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  1825

Query  421   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
             LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ
Sbjct  1826  LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  2005

Query  481   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
             EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR
Sbjct  2006  EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  2185

Query  541   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
             QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  2186  QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  2365

Query  601   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
             WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  2366  WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  2545

Query  661   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
             LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  2546  LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  2725

Query  721   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
             WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  2726  WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  2905

Query  781   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
             SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  2906  SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  3085

Query  841   VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
             VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  3086  VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  3265

Query  901   TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
             TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  3266  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  3445

Query  949   -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
              PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  3446  APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  3625

Query  1008  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
             QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  3626  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  3805

Query  1068  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
             SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  3806  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  3985

Query  1128  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
             QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM
Sbjct  3986  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  4165

Query  1188  EQLNNSFPSSRGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             EQLNNSFPSSRGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  4166  EQLNNSFPSSRGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  4294


>ref|NM_004010.3| Homo sapiens dystrophin (DMD), transcript variant Dp427p2, mRNA
Length=14083

 Score = 2486 bits (6443),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1200/1215 (98%), Positives = 1200/1215 (98%), Gaps = 13/1215 (1%)
 Frame = +2

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
              MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  7715   MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  7894

Query  61     EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
              EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  7895   EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  8074

Query  121    DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA
Sbjct  8075   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  8254

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK
Sbjct  8255   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  8434

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ
Sbjct  8435   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  8614

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
              KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  8615   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  8794

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  8795   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  8974

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ
Sbjct  8975   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  9154

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
              EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR
Sbjct  9155   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  9334

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  9335   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  9514

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  9515   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  9694

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  9695   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  9874

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  9875   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  10054

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  10055  SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  10234

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  10235  VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  10414

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
              TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  10415  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  10594

Query  949    -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
               PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  10595  APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  10774

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
              QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  10775  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  10954

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  10955  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  11134

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM
Sbjct  11135  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  11314

Query  1188   EQLNNSFPSSRGHNV  1202
              EQLNNSFPSSRG N 
Sbjct  11315  EQLNNSFPSSRGRNT  11359


 Score = 71.6 bits (174),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/33 (100%), Positives = 33/33 (100%), Gaps = 0/33 (0%)
 Frame = +1

Query  1198   RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
              RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  11377  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  11475


 Score = 59.3 bits (142),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 81/382 (21%), Positives = 175/382 (45%), Gaps = 54/382 (14%)
 Frame = +2

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             +PS+ + E+          T ++  L  ++Q++ +  +   D ED+     KQ+ +++++
Sbjct  6320  VPSTYLTEI----------THVSQALLEVEQLLNAPDLCAKDFEDL----FKQEESLKNI  6457

Query  61    E---QRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNE  117
             +   Q+     ++I + +    +++    R  + + + ++  QW++V +  ++R+ + + 
Sbjct  6458  KDSLQQSSGRIDIIHSKKTAALQSATPVERVKLQEALSQLDFQWEKVNKMYKDRQGRFDR  6637

Query  118   M----------LKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLA  167
                        +K   QWL    EAEQ L + +   E+W+   Y            K+L 
Sbjct  6638  SVEKWRRFHYDIKIFNQWLT---EAEQFLRKTQIP-ENWEHAKYK--------WYLKELQ  6781

Query  168   KDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEET  227
               + Q QT V   N    ++++  S  D   +     ++N  W+ + K++S+R+  LEE 
Sbjct  6782  DGIGQRQTVVRTLNATGEEIIQQSSKTDASILQEKLGSLNLRWQEVCKQLSDRKKRLEEQ  6961

Query  228   HRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEA  287
               +L +F  DL +F+ WL EA+  A++  +  ++++L E  + VK L+++    QG    
Sbjct  6962  KNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVEELPLRQG----  7129

Query  288   HTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ  346
                +   L+E    +L S   S ++   L+ +L   N +W ++ +     +  +EA    
Sbjct  7130  ---ILKQLNETGGPVLVSAPISPEEQDKLENKLKQTNLQWIKVSRALPEKQGEIEAQIKD  7300

Query  347   WKRLHLSLQE-------LLVWL  361
               +L   L++       LL+WL
Sbjct  7301  LGQLEKKLEDLEEQLNHLLLWL  7366


 Score = 46.2 bits (108),  Expect = 0.12, Method: Compositional matrix adjust.
 Identities = 91/422 (21%), Positives = 180/422 (42%), Gaps = 48/422 (11%)
 Frame = +2

Query  154   DAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSI  213
             + +++++ E + L   L++ Q+ +   +    ++ +   ++ +RK     E I   W+ +
Sbjct  3251  EIMEQRLGELQALQSSLQEQQSGLYYLSTTVKEMSKKAPSEISRKYQSEFEEIEGRWKKL  3430

Query  214   HKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER--LLEDSKGV  271
               ++ E    LEE    L++    ++    W+ E         D   KE    L DS+ +
Sbjct  3431  SSQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEV--------DVFLKEEWPALGDSEIL  3586

Query  272   KELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRK  331
             K+ +KQ + L  +I+      ++++E  QKI    E  + A  L+  L  +N +W  + +
Sbjct  3587  KKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEAE-PEFASRLETELKELNTQWDHMCQ  3763

Query  332   KSLNIRSHLEASSDQWKRLHLSLQELLVWL-QLKDDELSRQAPIGGDFP-----AVQKQN  385
             +    +  L+   ++   L   L E+  W+ Q +++ L R      DF       +QK  
Sbjct  3764  QVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAEEEYLER------DFEYKTPDELQKAV  3925

Query  386   DVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLR  445
             +  +  K E + KE  +    E+V   + + P    E L +E   L      Q +   L 
Sbjct  3926  EEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEALKKELETLTT--NYQWLCTRLN  4099

Query  446   KQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGD  505
              + + +   W       A W     E L  L++  +  +E++ KL+  E I G  + + +
Sbjct  4100  GKCKTLEEVW-------ACWH----ELLSYLEKANKWLNEVEFKLKTTENIPGGAEEISE  4246

Query  506   LLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWK  565
             +L DSL++ +             ++N + +  LA+ LT  G+     N   LE  N+RW+
Sbjct  4247  VL-DSLENLMRHS----------EDNPNQIRILAQTLTDGGVMDELIN-EELETFNSRWR  4390

Query  566   LL  567
              L
Sbjct  4391  EL  4396


 Score = 44.3 bits (103),  Expect = 0.40, Method: Compositional matrix adjust.
 Identities = 79/356 (22%), Positives = 155/356 (43%), Gaps = 42/356 (11%)
 Frame = +2

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             L  W++ +D  +K +   +GD E + + + + +  + D++  +P L  +    Q +KN+ 
Sbjct  3512  LKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEA  3691

Query  82    SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
               + A  + T+ ++ +  QWD + + +  R++ L   L+ +    +   E  + + QA  
Sbjct  3692  EPEFASRLETE-LKELNTQWDHMCQQVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAE-  3865

Query  142   KLESWKEGPY---TVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS--ADDT  196
               E + E  +   T D +QK + E K+  ++ +Q +  V +  +    ++      A + 
Sbjct  3866  --EEYLERDFEYKTPDELQKAVEEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEA  4039

Query  197   RKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAE----TTA  252
              K  + T   N  W  +  R++ +   LEE      +    LEK   WL E E    TT 
Sbjct  4040  LKKELETLTTNYQW--LCTRLNGKCKTLEEVWACWHELLSYLEKANKWLNEVEFKLKTTE  4213

Query  253   NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDA  312
             N+   A   E + E    ++ LM+                H+ D  +Q  + +   +D  
Sbjct  4214  NIPGGA---EEISEVLDSLENLMR----------------HSEDNPNQIRILAQTLTDGG  4336

Query  313   V---LLQRRLDNMNFKWSELRKKSLNIRSHLEAS----SDQWKRLHLSLQELLVWL  361
             V   L+   L+  N +W EL ++++  +  LE S     +  K LHL +QE L ++
Sbjct  4337  VMDELINEELETFNSRWRELHEEAVRRQKLLEQSIQSAQETEKSLHL-IQESLTFI  4501


 Score = 43.5 bits (101),  Expect = 0.82, Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 133/281 (47%), Gaps = 42/281 (14%)
 Frame = +2

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             LT+WL+  D  +  +  + G   +++  +   KAT +++E+++  L+ +    + LK   
Sbjct  5081  LTEWLAATDMELTKRSAVEGMPSNLDSEVAWGKATQKEIEKQKVHLKSITEVGEALKTVL  5260

Query  82    SNQEARTIITDRIERIQNQWD--------------EVQEHLQNRRQQLNEMLKDSTQWLE  127
               +E  T++ D++  + + W               E Q+H++   Q ++ +    T+W+ 
Sbjct  5261  GKKE--TLVEDKLSLLNSNWIAVTSRAEEWLNLLLEYQKHMETFDQNVDHI----TKWI-  5419

Query  128   AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
                +A+ +L       ES K+ P      Q+K    K+L  +L   +  VD   D A  L
Sbjct  5420  --IQADTLLD------ESEKKKP------QQKEDVLKRLKAELNDIRPKVDSTRDQAANL  5557

Query  188   LRDYSADDTRK-VHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
             + +   D  RK V      +N  + +I  R+   +A++    + L+QF  D++K L  L 
Sbjct  5558  MAN-RGDHCRKLVEPQISELNHRFAAISHRIKTGKASI--PLKELEQFNSDIQKLLEPL-  5725

Query  247   EAETTANV-LQDATRKERLLEDSKG-VKELMKQWQDLQGEI  285
             EAE    V L++    + + ED++G VKEL+++  +LQ  I
Sbjct  5726  EAEIQQGVNLKEEDFNKDMNEDNEGTVKELLQRGDNLQQRI  5848


>ref|NM_004009.3| Homo sapiens dystrophin (DMD), transcript variant Dp427p1, mRNA
Length=14000

 Score = 2486 bits (6443),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1200/1215 (98%), Positives = 1200/1215 (98%), Gaps = 13/1215 (1%)
 Frame = +3

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
              MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  7632   MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  7811

Query  61     EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
              EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  7812   EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  7991

Query  121    DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA
Sbjct  7992   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  8171

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK
Sbjct  8172   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  8351

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ
Sbjct  8352   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  8531

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
              KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  8532   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  8711

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  8712   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  8891

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ
Sbjct  8892   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  9071

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
              EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR
Sbjct  9072   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  9251

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  9252   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  9431

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  9432   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  9611

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  9612   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  9791

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  9792   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  9971

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  9972   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  10151

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  10152  VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  10331

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
              TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  10332  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  10511

Query  949    -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
               PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  10512  APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  10691

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
              QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  10692  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  10871

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  10872  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  11051

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM
Sbjct  11052  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  11231

Query  1188   EQLNNSFPSSRGHNV  1202
              EQLNNSFPSSRG N 
Sbjct  11232  EQLNNSFPSSRGRNT  11276


 Score = 71.6 bits (174),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/33 (100%), Positives = 33/33 (100%), Gaps = 0/33 (0%)
 Frame = +2

Query  1198   RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
              RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  11294  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  11392


 Score = 59.3 bits (142),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 81/382 (21%), Positives = 175/382 (45%), Gaps = 54/382 (14%)
 Frame = +3

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             +PS+ + E+          T ++  L  ++Q++ +  +   D ED+     KQ+ +++++
Sbjct  6237  VPSTYLTEI----------THVSQALLEVEQLLNAPDLCAKDFEDL----FKQEESLKNI  6374

Query  61    E---QRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNE  117
             +   Q+     ++I + +    +++    R  + + + ++  QW++V +  ++R+ + + 
Sbjct  6375  KDSLQQSSGRIDIIHSKKTAALQSATPVERVKLQEALSQLDFQWEKVNKMYKDRQGRFDR  6554

Query  118   M----------LKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLA  167
                        +K   QWL    EAEQ L + +   E+W+   Y            K+L 
Sbjct  6555  SVEKWRRFHYDIKIFNQWLT---EAEQFLRKTQIP-ENWEHAKYK--------WYLKELQ  6698

Query  168   KDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEET  227
               + Q QT V   N    ++++  S  D   +     ++N  W+ + K++S+R+  LEE 
Sbjct  6699  DGIGQRQTVVRTLNATGEEIIQQSSKTDASILQEKLGSLNLRWQEVCKQLSDRKKRLEEQ  6878

Query  228   HRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEA  287
               +L +F  DL +F+ WL EA+  A++  +  ++++L E  + VK L+++    QG    
Sbjct  6879  KNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVEELPLRQG----  7046

Query  288   HTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ  346
                +   L+E    +L S   S ++   L+ +L   N +W ++ +     +  +EA    
Sbjct  7047  ---ILKQLNETGGPVLVSAPISPEEQDKLENKLKQTNLQWIKVSRALPEKQGEIEAQIKD  7217

Query  347   WKRLHLSLQE-------LLVWL  361
               +L   L++       LL+WL
Sbjct  7218  LGQLEKKLEDLEEQLNHLLLWL  7283


 Score = 46.2 bits (108),  Expect = 0.12, Method: Compositional matrix adjust.
 Identities = 91/422 (21%), Positives = 180/422 (42%), Gaps = 48/422 (11%)
 Frame = +3

Query  154   DAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSI  213
             + +++++ E + L   L++ Q+ +   +    ++ +   ++ +RK     E I   W+ +
Sbjct  3168  EIMEQRLGELQALQSSLQEQQSGLYYLSTTVKEMSKKAPSEISRKYQSEFEEIEGRWKKL  3347

Query  214   HKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER--LLEDSKGV  271
               ++ E    LEE    L++    ++    W+ E         D   KE    L DS+ +
Sbjct  3348  SSQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEV--------DVFLKEEWPALGDSEIL  3503

Query  272   KELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRK  331
             K+ +KQ + L  +I+      ++++E  QKI    E  + A  L+  L  +N +W  + +
Sbjct  3504  KKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEAE-PEFASRLETELKELNTQWDHMCQ  3680

Query  332   KSLNIRSHLEASSDQWKRLHLSLQELLVWL-QLKDDELSRQAPIGGDFP-----AVQKQN  385
             +    +  L+   ++   L   L E+  W+ Q +++ L R      DF       +QK  
Sbjct  3681  QVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAEEEYLER------DFEYKTPDELQKAV  3842

Query  386   DVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLR  445
             +  +  K E + KE  +    E+V   + + P    E L +E   L      Q +   L 
Sbjct  3843  EEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEALKKELETLTT--NYQWLCTRLN  4016

Query  446   KQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGD  505
              + + +   W       A W     E L  L++  +  +E++ KL+  E I G  + + +
Sbjct  4017  GKCKTLEEVW-------ACWH----ELLSYLEKANKWLNEVEFKLKTTENIPGGAEEISE  4163

Query  506   LLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWK  565
             +L DSL++ +             ++N + +  LA+ LT  G+     N   LE  N+RW+
Sbjct  4164  VL-DSLENLMRHS----------EDNPNQIRILAQTLTDGGVMDELIN-EELETFNSRWR  4307

Query  566   LL  567
              L
Sbjct  4308  EL  4313


 Score = 44.3 bits (103),  Expect = 0.40, Method: Compositional matrix adjust.
 Identities = 79/356 (22%), Positives = 155/356 (43%), Gaps = 42/356 (11%)
 Frame = +3

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             L  W++ +D  +K +   +GD E + + + + +  + D++  +P L  +    Q +KN+ 
Sbjct  3429  LKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEA  3608

Query  82    SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
               + A  + T+ ++ +  QWD + + +  R++ L   L+ +    +   E  + + QA  
Sbjct  3609  EPEFASRLETE-LKELNTQWDHMCQQVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAE-  3782

Query  142   KLESWKEGPY---TVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS--ADDT  196
               E + E  +   T D +QK + E K+  ++ +Q +  V +  +    ++      A + 
Sbjct  3783  --EEYLERDFEYKTPDELQKAVEEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEA  3956

Query  197   RKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAE----TTA  252
              K  + T   N  W  +  R++ +   LEE      +    LEK   WL E E    TT 
Sbjct  3957  LKKELETLTTNYQW--LCTRLNGKCKTLEEVWACWHELLSYLEKANKWLNEVEFKLKTTE  4130

Query  253   NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDA  312
             N+   A   E + E    ++ LM+                H+ D  +Q  + +   +D  
Sbjct  4131  NIPGGA---EEISEVLDSLENLMR----------------HSEDNPNQIRILAQTLTDGG  4253

Query  313   V---LLQRRLDNMNFKWSELRKKSLNIRSHLEAS----SDQWKRLHLSLQELLVWL  361
             V   L+   L+  N +W EL ++++  +  LE S     +  K LHL +QE L ++
Sbjct  4254  VMDELINEELETFNSRWRELHEEAVRRQKLLEQSIQSAQETEKSLHL-IQESLTFI  4418


 Score = 43.5 bits (101),  Expect = 0.82, Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 133/281 (47%), Gaps = 42/281 (14%)
 Frame = +3

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             LT+WL+  D  +  +  + G   +++  +   KAT +++E+++  L+ +    + LK   
Sbjct  4998  LTEWLAATDMELTKRSAVEGMPSNLDSEVAWGKATQKEIEKQKVHLKSITEVGEALKTVL  5177

Query  82    SNQEARTIITDRIERIQNQWD--------------EVQEHLQNRRQQLNEMLKDSTQWLE  127
               +E  T++ D++  + + W               E Q+H++   Q ++ +    T+W+ 
Sbjct  5178  GKKE--TLVEDKLSLLNSNWIAVTSRAEEWLNLLLEYQKHMETFDQNVDHI----TKWI-  5336

Query  128   AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
                +A+ +L       ES K+ P      Q+K    K+L  +L   +  VD   D A  L
Sbjct  5337  --IQADTLLD------ESEKKKP------QQKEDVLKRLKAELNDIRPKVDSTRDQAANL  5474

Query  188   LRDYSADDTRK-VHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
             + +   D  RK V      +N  + +I  R+   +A++    + L+QF  D++K L  L 
Sbjct  5475  MAN-RGDHCRKLVEPQISELNHRFAAISHRIKTGKASI--PLKELEQFNSDIQKLLEPL-  5642

Query  247   EAETTANV-LQDATRKERLLEDSKG-VKELMKQWQDLQGEI  285
             EAE    V L++    + + ED++G VKEL+++  +LQ  I
Sbjct  5643  EAEIQQGVNLKEEDFNKDMNEDNEGTVKELLQRGDNLQQRI  5765


>ref|NM_004007.2| Homo sapiens dystrophin (DMD), transcript variant Dp427l, mRNA
Length=13764

 Score = 2486 bits (6443),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1200/1215 (98%), Positives = 1200/1215 (98%), Gaps = 13/1215 (1%)
 Frame = +1

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
              MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  7396   MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  7575

Query  61     EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
              EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  7576   EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  7755

Query  121    DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA
Sbjct  7756   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  7935

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK
Sbjct  7936   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  8115

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ
Sbjct  8116   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  8295

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
              KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  8296   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  8475

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  8476   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  8655

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ
Sbjct  8656   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  8835

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
              EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR
Sbjct  8836   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  9015

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  9016   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  9195

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  9196   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  9375

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  9376   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  9555

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  9556   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  9735

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  9736   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  9915

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  9916   VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  10095

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
              TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  10096  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  10275

Query  949    -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
               PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  10276  APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  10455

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
              QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  10456  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  10635

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  10636  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  10815

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM
Sbjct  10816  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  10995

Query  1188   EQLNNSFPSSRGHNV  1202
              EQLNNSFPSSRG N 
Sbjct  10996  EQLNNSFPSSRGRNT  11040


 Score = 71.6 bits (174),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/33 (100%), Positives = 33/33 (100%), Gaps = 0/33 (0%)
 Frame = +3

Query  1198   RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
              RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  11058  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  11156


 Score = 59.3 bits (142),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 81/382 (21%), Positives = 175/382 (45%), Gaps = 54/382 (14%)
 Frame = +1

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             +PS+ + E+          T ++  L  ++Q++ +  +   D ED+     KQ+ +++++
Sbjct  6001  VPSTYLTEI----------THVSQALLEVEQLLNAPDLCAKDFEDL----FKQEESLKNI  6138

Query  61    E---QRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNE  117
             +   Q+     ++I + +    +++    R  + + + ++  QW++V +  ++R+ + + 
Sbjct  6139  KDSLQQSSGRIDIIHSKKTAALQSATPVERVKLQEALSQLDFQWEKVNKMYKDRQGRFDR  6318

Query  118   M----------LKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLA  167
                        +K   QWL    EAEQ L + +   E+W+   Y            K+L 
Sbjct  6319  SVEKWRRFHYDIKIFNQWLT---EAEQFLRKTQIP-ENWEHAKYK--------WYLKELQ  6462

Query  168   KDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEET  227
               + Q QT V   N    ++++  S  D   +     ++N  W+ + K++S+R+  LEE 
Sbjct  6463  DGIGQRQTVVRTLNATGEEIIQQSSKTDASILQEKLGSLNLRWQEVCKQLSDRKKRLEEQ  6642

Query  228   HRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEA  287
               +L +F  DL +F+ WL EA+  A++  +  ++++L E  + VK L+++    QG    
Sbjct  6643  KNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVEELPLRQG----  6810

Query  288   HTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ  346
                +   L+E    +L S   S ++   L+ +L   N +W ++ +     +  +EA    
Sbjct  6811  ---ILKQLNETGGPVLVSAPISPEEQDKLENKLKQTNLQWIKVSRALPEKQGEIEAQIKD  6981

Query  347   WKRLHLSLQE-------LLVWL  361
               +L   L++       LL+WL
Sbjct  6982  LGQLEKKLEDLEEQLNHLLLWL  7047


 Score = 46.2 bits (108),  Expect = 0.12, Method: Compositional matrix adjust.
 Identities = 91/422 (21%), Positives = 180/422 (42%), Gaps = 48/422 (11%)
 Frame = +1

Query  154   DAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSI  213
             + +++++ E + L   L++ Q+ +   +    ++ +   ++ +RK     E I   W+ +
Sbjct  2932  EIMEQRLGELQALQSSLQEQQSGLYYLSTTVKEMSKKAPSEISRKYQSEFEEIEGRWKKL  3111

Query  214   HKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER--LLEDSKGV  271
               ++ E    LEE    L++    ++    W+ E         D   KE    L DS+ +
Sbjct  3112  SSQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEV--------DVFLKEEWPALGDSEIL  3267

Query  272   KELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRK  331
             K+ +KQ + L  +I+      ++++E  QKI    E  + A  L+  L  +N +W  + +
Sbjct  3268  KKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEAE-PEFASRLETELKELNTQWDHMCQ  3444

Query  332   KSLNIRSHLEASSDQWKRLHLSLQELLVWL-QLKDDELSRQAPIGGDFP-----AVQKQN  385
             +    +  L+   ++   L   L E+  W+ Q +++ L R      DF       +QK  
Sbjct  3445  QVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAEEEYLER------DFEYKTPDELQKAV  3606

Query  386   DVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLR  445
             +  +  K E + KE  +    E+V   + + P    E L +E   L      Q +   L 
Sbjct  3607  EEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEALKKELETLTT--NYQWLCTRLN  3780

Query  446   KQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGD  505
              + + +   W       A W     E L  L++  +  +E++ KL+  E I G  + + +
Sbjct  3781  GKCKTLEEVW-------ACWH----ELLSYLEKANKWLNEVEFKLKTTENIPGGAEEISE  3927

Query  506   LLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWK  565
             +L DSL++ +             ++N + +  LA+ LT  G+     N   LE  N+RW+
Sbjct  3928  VL-DSLENLMRHS----------EDNPNQIRILAQTLTDGGVMDELIN-EELETFNSRWR  4071

Query  566   LL  567
              L
Sbjct  4072  EL  4077


 Score = 44.3 bits (103),  Expect = 0.40, Method: Compositional matrix adjust.
 Identities = 79/356 (22%), Positives = 155/356 (43%), Gaps = 42/356 (11%)
 Frame = +1

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             L  W++ +D  +K +   +GD E + + + + +  + D++  +P L  +    Q +KN+ 
Sbjct  3193  LKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEA  3372

Query  82    SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
               + A  + T+ ++ +  QWD + + +  R++ L   L+ +    +   E  + + QA  
Sbjct  3373  EPEFASRLETE-LKELNTQWDHMCQQVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAE-  3546

Query  142   KLESWKEGPY---TVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS--ADDT  196
               E + E  +   T D +QK + E K+  ++ +Q +  V +  +    ++      A + 
Sbjct  3547  --EEYLERDFEYKTPDELQKAVEEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEA  3720

Query  197   RKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAE----TTA  252
              K  + T   N  W  +  R++ +   LEE      +    LEK   WL E E    TT 
Sbjct  3721  LKKELETLTTNYQW--LCTRLNGKCKTLEEVWACWHELLSYLEKANKWLNEVEFKLKTTE  3894

Query  253   NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDA  312
             N+   A   E + E    ++ LM+                H+ D  +Q  + +   +D  
Sbjct  3895  NIPGGA---EEISEVLDSLENLMR----------------HSEDNPNQIRILAQTLTDGG  4017

Query  313   V---LLQRRLDNMNFKWSELRKKSLNIRSHLEAS----SDQWKRLHLSLQELLVWL  361
             V   L+   L+  N +W EL ++++  +  LE S     +  K LHL +QE L ++
Sbjct  4018  VMDELINEELETFNSRWRELHEEAVRRQKLLEQSIQSAQETEKSLHL-IQESLTFI  4182


 Score = 43.5 bits (101),  Expect = 0.82, Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 133/281 (47%), Gaps = 42/281 (14%)
 Frame = +1

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             LT+WL+  D  +  +  + G   +++  +   KAT +++E+++  L+ +    + LK   
Sbjct  4762  LTEWLAATDMELTKRSAVEGMPSNLDSEVAWGKATQKEIEKQKVHLKSITEVGEALKTVL  4941

Query  82    SNQEARTIITDRIERIQNQWD--------------EVQEHLQNRRQQLNEMLKDSTQWLE  127
               +E  T++ D++  + + W               E Q+H++   Q ++ +    T+W+ 
Sbjct  4942  GKKE--TLVEDKLSLLNSNWIAVTSRAEEWLNLLLEYQKHMETFDQNVDHI----TKWI-  5100

Query  128   AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
                +A+ +L       ES K+ P      Q+K    K+L  +L   +  VD   D A  L
Sbjct  5101  --IQADTLLD------ESEKKKP------QQKEDVLKRLKAELNDIRPKVDSTRDQAANL  5238

Query  188   LRDYSADDTRK-VHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
             + +   D  RK V      +N  + +I  R+   +A++    + L+QF  D++K L  L 
Sbjct  5239  MAN-RGDHCRKLVEPQISELNHRFAAISHRIKTGKASI--PLKELEQFNSDIQKLLEPL-  5406

Query  247   EAETTANV-LQDATRKERLLEDSKG-VKELMKQWQDLQGEI  285
             EAE    V L++    + + ED++G VKEL+++  +LQ  I
Sbjct  5407  EAEIQQGVNLKEEDFNKDMNEDNEGTVKELLQRGDNLQQRI  5529


>ref|NM_004006.2| Homo sapiens dystrophin (DMD), transcript variant Dp427m, mRNA
Length=13993

 Score = 2486 bits (6443),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1200/1215 (98%), Positives = 1200/1215 (98%), Gaps = 13/1215 (1%)
 Frame = +2

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
              MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  7625   MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  7804

Query  61     EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
              EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  7805   EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  7984

Query  121    DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA
Sbjct  7985   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  8164

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK
Sbjct  8165   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  8344

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ
Sbjct  8345   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  8524

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
              KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  8525   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  8704

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  8705   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  8884

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ
Sbjct  8885   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  9064

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
              EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR
Sbjct  9065   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  9244

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  9245   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  9424

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  9425   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  9604

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  9605   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  9784

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  9785   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  9964

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  9965   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  10144

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  10145  VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  10324

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
              TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  10325  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  10504

Query  949    -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
               PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  10505  APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  10684

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
              QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  10685  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  10864

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  10865  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  11044

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM
Sbjct  11045  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  11224

Query  1188   EQLNNSFPSSRGHNV  1202
              EQLNNSFPSSRG N 
Sbjct  11225  EQLNNSFPSSRGRNT  11269


 Score = 71.6 bits (174),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/33 (100%), Positives = 33/33 (100%), Gaps = 0/33 (0%)
 Frame = +1

Query  1198   RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
              RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  11287  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  11385


 Score = 59.3 bits (142),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 81/382 (21%), Positives = 175/382 (45%), Gaps = 54/382 (14%)
 Frame = +2

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             +PS+ + E+          T ++  L  ++Q++ +  +   D ED+     KQ+ +++++
Sbjct  6230  VPSTYLTEI----------THVSQALLEVEQLLNAPDLCAKDFEDL----FKQEESLKNI  6367

Query  61    E---QRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNE  117
             +   Q+     ++I + +    +++    R  + + + ++  QW++V +  ++R+ + + 
Sbjct  6368  KDSLQQSSGRIDIIHSKKTAALQSATPVERVKLQEALSQLDFQWEKVNKMYKDRQGRFDR  6547

Query  118   M----------LKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLA  167
                        +K   QWL    EAEQ L + +   E+W+   Y            K+L 
Sbjct  6548  SVEKWRRFHYDIKIFNQWLT---EAEQFLRKTQIP-ENWEHAKYK--------WYLKELQ  6691

Query  168   KDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEET  227
               + Q QT V   N    ++++  S  D   +     ++N  W+ + K++S+R+  LEE 
Sbjct  6692  DGIGQRQTVVRTLNATGEEIIQQSSKTDASILQEKLGSLNLRWQEVCKQLSDRKKRLEEQ  6871

Query  228   HRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEA  287
               +L +F  DL +F+ WL EA+  A++  +  ++++L E  + VK L+++    QG    
Sbjct  6872  KNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVEELPLRQG----  7039

Query  288   HTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ  346
                +   L+E    +L S   S ++   L+ +L   N +W ++ +     +  +EA    
Sbjct  7040  ---ILKQLNETGGPVLVSAPISPEEQDKLENKLKQTNLQWIKVSRALPEKQGEIEAQIKD  7210

Query  347   WKRLHLSLQE-------LLVWL  361
               +L   L++       LL+WL
Sbjct  7211  LGQLEKKLEDLEEQLNHLLLWL  7276


 Score = 46.2 bits (108),  Expect = 0.12, Method: Compositional matrix adjust.
 Identities = 91/422 (21%), Positives = 180/422 (42%), Gaps = 48/422 (11%)
 Frame = +2

Query  154   DAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSI  213
             + +++++ E + L   L++ Q+ +   +    ++ +   ++ +RK     E I   W+ +
Sbjct  3161  EIMEQRLGELQALQSSLQEQQSGLYYLSTTVKEMSKKAPSEISRKYQSEFEEIEGRWKKL  3340

Query  214   HKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER--LLEDSKGV  271
               ++ E    LEE    L++    ++    W+ E         D   KE    L DS+ +
Sbjct  3341  SSQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEV--------DVFLKEEWPALGDSEIL  3496

Query  272   KELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRK  331
             K+ +KQ + L  +I+      ++++E  QKI    E  + A  L+  L  +N +W  + +
Sbjct  3497  KKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEAE-PEFASRLETELKELNTQWDHMCQ  3673

Query  332   KSLNIRSHLEASSDQWKRLHLSLQELLVWL-QLKDDELSRQAPIGGDFP-----AVQKQN  385
             +    +  L+   ++   L   L E+  W+ Q +++ L R      DF       +QK  
Sbjct  3674  QVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAEEEYLER------DFEYKTPDELQKAV  3835

Query  386   DVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLR  445
             +  +  K E + KE  +    E+V   + + P    E L +E   L      Q +   L 
Sbjct  3836  EEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEALKKELETLTT--NYQWLCTRLN  4009

Query  446   KQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGD  505
              + + +   W       A W     E L  L++  +  +E++ KL+  E I G  + + +
Sbjct  4010  GKCKTLEEVW-------ACWH----ELLSYLEKANKWLNEVEFKLKTTENIPGGAEEISE  4156

Query  506   LLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWK  565
             +L DSL++ +             ++N + +  LA+ LT  G+     N   LE  N+RW+
Sbjct  4157  VL-DSLENLMRHS----------EDNPNQIRILAQTLTDGGVMDELIN-EELETFNSRWR  4300

Query  566   LL  567
              L
Sbjct  4301  EL  4306


 Score = 44.3 bits (103),  Expect = 0.40, Method: Compositional matrix adjust.
 Identities = 79/356 (22%), Positives = 155/356 (43%), Gaps = 42/356 (11%)
 Frame = +2

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             L  W++ +D  +K +   +GD E + + + + +  + D++  +P L  +    Q +KN+ 
Sbjct  3422  LKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEA  3601

Query  82    SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
               + A  + T+ ++ +  QWD + + +  R++ L   L+ +    +   E  + + QA  
Sbjct  3602  EPEFASRLETE-LKELNTQWDHMCQQVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAE-  3775

Query  142   KLESWKEGPY---TVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS--ADDT  196
               E + E  +   T D +QK + E K+  ++ +Q +  V +  +    ++      A + 
Sbjct  3776  --EEYLERDFEYKTPDELQKAVEEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEA  3949

Query  197   RKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAE----TTA  252
              K  + T   N  W  +  R++ +   LEE      +    LEK   WL E E    TT 
Sbjct  3950  LKKELETLTTNYQW--LCTRLNGKCKTLEEVWACWHELLSYLEKANKWLNEVEFKLKTTE  4123

Query  253   NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDA  312
             N+   A   E + E    ++ LM+                H+ D  +Q  + +   +D  
Sbjct  4124  NIPGGA---EEISEVLDSLENLMR----------------HSEDNPNQIRILAQTLTDGG  4246

Query  313   V---LLQRRLDNMNFKWSELRKKSLNIRSHLEAS----SDQWKRLHLSLQELLVWL  361
             V   L+   L+  N +W EL ++++  +  LE S     +  K LHL +QE L ++
Sbjct  4247  VMDELINEELETFNSRWRELHEEAVRRQKLLEQSIQSAQETEKSLHL-IQESLTFI  4411


 Score = 43.5 bits (101),  Expect = 0.82, Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 133/281 (47%), Gaps = 42/281 (14%)
 Frame = +2

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             LT+WL+  D  +  +  + G   +++  +   KAT +++E+++  L+ +    + LK   
Sbjct  4991  LTEWLAATDMELTKRSAVEGMPSNLDSEVAWGKATQKEIEKQKVHLKSITEVGEALKTVL  5170

Query  82    SNQEARTIITDRIERIQNQWD--------------EVQEHLQNRRQQLNEMLKDSTQWLE  127
               +E  T++ D++  + + W               E Q+H++   Q ++ +    T+W+ 
Sbjct  5171  GKKE--TLVEDKLSLLNSNWIAVTSRAEEWLNLLLEYQKHMETFDQNVDHI----TKWI-  5329

Query  128   AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
                +A+ +L       ES K+ P      Q+K    K+L  +L   +  VD   D A  L
Sbjct  5330  --IQADTLLD------ESEKKKP------QQKEDVLKRLKAELNDIRPKVDSTRDQAANL  5467

Query  188   LRDYSADDTRK-VHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
             + +   D  RK V      +N  + +I  R+   +A++    + L+QF  D++K L  L 
Sbjct  5468  MAN-RGDHCRKLVEPQISELNHRFAAISHRIKTGKASI--PLKELEQFNSDIQKLLEPL-  5635

Query  247   EAETTANV-LQDATRKERLLEDSKG-VKELMKQWQDLQGEI  285
             EAE    V L++    + + ED++G VKEL+++  +LQ  I
Sbjct  5636  EAEIQQGVNLKEEDFNKDMNEDNEGTVKELLQRGDNLQQRI  5758


>ref|NM_000109.3| Homo sapiens dystrophin (DMD), transcript variant Dp427c, mRNA
Length=14069

 Score = 2486 bits (6443),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1200/1215 (98%), Positives = 1200/1215 (98%), Gaps = 13/1215 (1%)
 Frame = +3

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
              MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  7701   MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  7880

Query  61     EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
              EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  7881   EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  8060

Query  121    DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA
Sbjct  8061   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  8240

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK
Sbjct  8241   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  8420

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ
Sbjct  8421   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  8600

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
              KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  8601   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  8780

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  8781   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  8960

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ
Sbjct  8961   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  9140

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
              EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR
Sbjct  9141   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  9320

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  9321   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  9500

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  9501   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  9680

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  9681   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  9860

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  9861   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  10040

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  10041  SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  10220

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  10221  VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  10400

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
              TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  10401  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  10580

Query  949    -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
               PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  10581  APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  10760

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
              QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  10761  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  10940

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  10941  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  11120

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM
Sbjct  11121  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  11300

Query  1188   EQLNNSFPSSRGHNV  1202
              EQLNNSFPSSRG N 
Sbjct  11301  EQLNNSFPSSRGRNT  11345


 Score = 71.6 bits (174),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/33 (100%), Positives = 33/33 (100%), Gaps = 0/33 (0%)
 Frame = +2

Query  1198   RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
              RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  11363  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  11461


 Score = 59.3 bits (142),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 81/382 (21%), Positives = 175/382 (45%), Gaps = 54/382 (14%)
 Frame = +3

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             +PS+ + E+          T ++  L  ++Q++ +  +   D ED+     KQ+ +++++
Sbjct  6306  VPSTYLTEI----------THVSQALLEVEQLLNAPDLCAKDFEDL----FKQEESLKNI  6443

Query  61    E---QRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNE  117
             +   Q+     ++I + +    +++    R  + + + ++  QW++V +  ++R+ + + 
Sbjct  6444  KDSLQQSSGRIDIIHSKKTAALQSATPVERVKLQEALSQLDFQWEKVNKMYKDRQGRFDR  6623

Query  118   M----------LKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLA  167
                        +K   QWL    EAEQ L + +   E+W+   Y            K+L 
Sbjct  6624  SVEKWRRFHYDIKIFNQWLT---EAEQFLRKTQIP-ENWEHAKYK--------WYLKELQ  6767

Query  168   KDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEET  227
               + Q QT V   N    ++++  S  D   +     ++N  W+ + K++S+R+  LEE 
Sbjct  6768  DGIGQRQTVVRTLNATGEEIIQQSSKTDASILQEKLGSLNLRWQEVCKQLSDRKKRLEEQ  6947

Query  228   HRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEA  287
               +L +F  DL +F+ WL EA+  A++  +  ++++L E  + VK L+++    QG    
Sbjct  6948  KNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVEELPLRQG----  7115

Query  288   HTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ  346
                +   L+E    +L S   S ++   L+ +L   N +W ++ +     +  +EA    
Sbjct  7116  ---ILKQLNETGGPVLVSAPISPEEQDKLENKLKQTNLQWIKVSRALPEKQGEIEAQIKD  7286

Query  347   WKRLHLSLQE-------LLVWL  361
               +L   L++       LL+WL
Sbjct  7287  LGQLEKKLEDLEEQLNHLLLWL  7352


 Score = 46.2 bits (108),  Expect = 0.12, Method: Compositional matrix adjust.
 Identities = 91/422 (21%), Positives = 180/422 (42%), Gaps = 48/422 (11%)
 Frame = +3

Query  154   DAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSI  213
             + +++++ E + L   L++ Q+ +   +    ++ +   ++ +RK     E I   W+ +
Sbjct  3237  EIMEQRLGELQALQSSLQEQQSGLYYLSTTVKEMSKKAPSEISRKYQSEFEEIEGRWKKL  3416

Query  214   HKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER--LLEDSKGV  271
               ++ E    LEE    L++    ++    W+ E         D   KE    L DS+ +
Sbjct  3417  SSQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEV--------DVFLKEEWPALGDSEIL  3572

Query  272   KELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRK  331
             K+ +KQ + L  +I+      ++++E  QKI    E  + A  L+  L  +N +W  + +
Sbjct  3573  KKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEAE-PEFASRLETELKELNTQWDHMCQ  3749

Query  332   KSLNIRSHLEASSDQWKRLHLSLQELLVWL-QLKDDELSRQAPIGGDFP-----AVQKQN  385
             +    +  L+   ++   L   L E+  W+ Q +++ L R      DF       +QK  
Sbjct  3750  QVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAEEEYLER------DFEYKTPDELQKAV  3911

Query  386   DVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLR  445
             +  +  K E + KE  +    E+V   + + P    E L +E   L      Q +   L 
Sbjct  3912  EEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEALKKELETLTT--NYQWLCTRLN  4085

Query  446   KQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGD  505
              + + +   W       A W     E L  L++  +  +E++ KL+  E I G  + + +
Sbjct  4086  GKCKTLEEVW-------ACWH----ELLSYLEKANKWLNEVEFKLKTTENIPGGAEEISE  4232

Query  506   LLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWK  565
             +L DSL++ +             ++N + +  LA+ LT  G+     N   LE  N+RW+
Sbjct  4233  VL-DSLENLMRHS----------EDNPNQIRILAQTLTDGGVMDELIN-EELETFNSRWR  4376

Query  566   LL  567
              L
Sbjct  4377  EL  4382


 Score = 44.3 bits (103),  Expect = 0.40, Method: Compositional matrix adjust.
 Identities = 79/356 (22%), Positives = 155/356 (43%), Gaps = 42/356 (11%)
 Frame = +3

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             L  W++ +D  +K +   +GD E + + + + +  + D++  +P L  +    Q +KN+ 
Sbjct  3498  LKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEA  3677

Query  82    SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
               + A  + T+ ++ +  QWD + + +  R++ L   L+ +    +   E  + + QA  
Sbjct  3678  EPEFASRLETE-LKELNTQWDHMCQQVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAE-  3851

Query  142   KLESWKEGPY---TVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS--ADDT  196
               E + E  +   T D +QK + E K+  ++ +Q +  V +  +    ++      A + 
Sbjct  3852  --EEYLERDFEYKTPDELQKAVEEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEA  4025

Query  197   RKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAE----TTA  252
              K  + T   N  W  +  R++ +   LEE      +    LEK   WL E E    TT 
Sbjct  4026  LKKELETLTTNYQW--LCTRLNGKCKTLEEVWACWHELLSYLEKANKWLNEVEFKLKTTE  4199

Query  253   NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDA  312
             N+   A   E + E    ++ LM+                H+ D  +Q  + +   +D  
Sbjct  4200  NIPGGA---EEISEVLDSLENLMR----------------HSEDNPNQIRILAQTLTDGG  4322

Query  313   V---LLQRRLDNMNFKWSELRKKSLNIRSHLEAS----SDQWKRLHLSLQELLVWL  361
             V   L+   L+  N +W EL ++++  +  LE S     +  K LHL +QE L ++
Sbjct  4323  VMDELINEELETFNSRWRELHEEAVRRQKLLEQSIQSAQETEKSLHL-IQESLTFI  4487


 Score = 43.5 bits (101),  Expect = 0.82, Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 133/281 (47%), Gaps = 42/281 (14%)
 Frame = +3

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             LT+WL+  D  +  +  + G   +++  +   KAT +++E+++  L+ +    + LK   
Sbjct  5067  LTEWLAATDMELTKRSAVEGMPSNLDSEVAWGKATQKEIEKQKVHLKSITEVGEALKTVL  5246

Query  82    SNQEARTIITDRIERIQNQWD--------------EVQEHLQNRRQQLNEMLKDSTQWLE  127
               +E  T++ D++  + + W               E Q+H++   Q ++ +    T+W+ 
Sbjct  5247  GKKE--TLVEDKLSLLNSNWIAVTSRAEEWLNLLLEYQKHMETFDQNVDHI----TKWI-  5405

Query  128   AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
                +A+ +L       ES K+ P      Q+K    K+L  +L   +  VD   D A  L
Sbjct  5406  --IQADTLLD------ESEKKKP------QQKEDVLKRLKAELNDIRPKVDSTRDQAANL  5543

Query  188   LRDYSADDTRK-VHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
             + +   D  RK V      +N  + +I  R+   +A++    + L+QF  D++K L  L 
Sbjct  5544  MAN-RGDHCRKLVEPQISELNHRFAAISHRIKTGKASI--PLKELEQFNSDIQKLLEPL-  5711

Query  247   EAETTANV-LQDATRKERLLEDSKG-VKELMKQWQDLQGEI  285
             EAE    V L++    + + ED++G VKEL+++  +LQ  I
Sbjct  5712  EAEIQQGVNLKEEDFNKDMNEDNEGTVKELLQRGDNLQQRI  5834


>gb|EU048698.1| Shuttle vector phcAd.DYS-FL, complete sequence
Length=30440

 Score = 2486 bits (6443),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1200/1215 (98%), Positives = 1200/1215 (98%), Gaps = 13/1215 (1%)
 Frame = -2

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
              MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  11656  MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  11477

Query  61     EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
              EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  11476  EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  11297

Query  121    DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA
Sbjct  11296  DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  11117

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK
Sbjct  11116  NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  10937

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ
Sbjct  10936  FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  10757

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
              KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  10756  KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  10577

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  10576  LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  10397

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ
Sbjct  10396  LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  10217

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
              EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR
Sbjct  10216  EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  10037

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  10036  QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  9857

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  9856   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  9677

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  9676   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  9497

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  9496   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  9317

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  9316   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  9137

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  9136   VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  8957

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
              TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  8956   TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  8777

Query  949    -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
               PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  8776   APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  8597

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
              QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  8596   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  8417

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  8416   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  8237

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM
Sbjct  8236   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  8057

Query  1188   EQLNNSFPSSRGHNV  1202
              EQLNNSFPSSRG N 
Sbjct  8056   EQLNNSFPSSRGRNT  8012


 Score = 59.3 bits (142),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 81/382 (21%), Positives = 175/382 (45%), Gaps = 54/382 (14%)
 Frame = -2

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
              +PS+ + E+          T ++  L  ++Q++ +  +   D ED+     KQ+ +++++
Sbjct  13051  VPSTYLTEI----------THVSQALLEVEQLLNAPDLCAKDFEDL----FKQEESLKNI  12914

Query  61     E---QRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNE  117
              +   Q+     ++I + +    +++    R  + + + ++  QW++V +  ++R+ + + 
Sbjct  12913  KDSLQQSSGRIDIIHSKKTAALQSATPVERVKLQEALSQLDFQWEKVNKMYKDRQGRFDR  12734

Query  118    M----------LKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLA  167
                         +K   QWL    EAEQ L + +   E+W+   Y            K+L 
Sbjct  12733  SVEKWRRFHYDIKIFNQWLT---EAEQFLRKTQIP-ENWEHAKYK--------WYLKELQ  12590

Query  168    KDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEET  227
                + Q QT V   N    ++++  S  D   +     ++N  W+ + K++S+R+  LEE 
Sbjct  12589  DGIGQRQTVVRTLNATGEEIIQQSSKTDASILQEKLGSLNLRWQEVCKQLSDRKKRLEEQ  12410

Query  228    HRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEA  287
                +L +F  DL +F+ WL EA+  A++  +  ++++L E  + VK L+++    QG    
Sbjct  12409  KNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVEELPLRQG----  12242

Query  288    HTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ  346
                 +   L+E    +L S   S ++   L+ +L   N +W ++ +     +  +EA    
Sbjct  12241  ---ILKQLNETGGPVLVSAPISPEEQDKLENKLKQTNLQWIKVSRALPEKQGEIEAQIKD  12071

Query  347    WKRLHLSLQE-------LLVWL  361
                +L   L++       LL+WL
Sbjct  12070  LGQLEKKLEDLEEQLNHLLLWL  12005


 Score = 45.8 bits (107),  Expect = 0.13, Method: Compositional matrix adjust.
 Identities = 91/422 (21%), Positives = 180/422 (42%), Gaps = 48/422 (11%)
 Frame = -2

Query  154    DAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSI  213
              + +++++ E + L   L++ Q+ +   +    ++ +   ++ +RK     E I   W+ +
Sbjct  16120  EIMEQRLGELQALQSSLQEQQSGLYYLSTTVKEMSKKAPSEISRKYQSEFEEIEGRWKKL  15941

Query  214    HKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER--LLEDSKGV  271
                ++ E    LEE    L++    ++    W+ E         D   KE    L DS+ +
Sbjct  15940  SSQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEV--------DVFLKEEWPALGDSEIL  15785

Query  272    KELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRK  331
              K+ +KQ + L  +I+      ++++E  QKI    E  + A  L+  L  +N +W  + +
Sbjct  15784  KKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEAE-PEFASRLETELKELNTQWDHMCQ  15608

Query  332    KSLNIRSHLEASSDQWKRLHLSLQELLVWL-QLKDDELSRQAPIGGDFP-----AVQKQN  385
              +    +  L+   ++   L   L E+  W+ Q +++ L R      DF       +QK  
Sbjct  15607  QVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAEEEYLER------DFEYKTPDELQKAV  15446

Query  386    DVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLR  445
              +  +  K E + KE  +    E+V   + + P    E L +E   L      Q +   L 
Sbjct  15445  EEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEALKKELETLTT--NYQWLCTRLN  15272

Query  446    KQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGD  505
               + + +   W       A W     E L  L++  +  +E++ KL+  E I G  + + +
Sbjct  15271  GKCKTLEEVW-------ACWH----ELLSYLEKANKWLNEVEFKLKTTENIPGGAEEISE  15125

Query  506    LLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWK  565
              +L DSL++ +             ++N + +  LA+ LT  G+     N   LE  N+RW+
Sbjct  15124  VL-DSLENLMRHS----------EDNPNQIRILAQTLTDGGVMDELIN-EELETFNSRWR  14981

Query  566    LL  567
               L
Sbjct  14980  EL  14975


 Score = 44.3 bits (103),  Expect = 0.41, Method: Compositional matrix adjust.
 Identities = 79/356 (22%), Positives = 155/356 (43%), Gaps = 42/356 (11%)
 Frame = -2

Query  22     LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
              L  W++ +D  +K +   +GD E + + + + +  + D++  +P L  +    Q +KN+ 
Sbjct  15859  LKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEA  15680

Query  82     SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
                + A  + T+ ++ +  QWD + + +  R++ L   L+ +    +   E  + + QA  
Sbjct  15679  EPEFASRLETE-LKELNTQWDHMCQQVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAE-  15506

Query  142    KLESWKEGPY---TVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS--ADDT  196
                E + E  +   T D +QK + E K+  ++ +Q +  V +  +    ++      A + 
Sbjct  15505  --EEYLERDFEYKTPDELQKAVEEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEA  15332

Query  197    RKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAE----TTA  252
               K  + T   N  W  +  R++ +   LEE      +    LEK   WL E E    TT 
Sbjct  15331  LKKELETLTTNYQW--LCTRLNGKCKTLEEVWACWHELLSYLEKANKWLNEVEFKLKTTE  15158

Query  253    NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDA  312
              N+   A   E + E    ++ LM+                H+ D  +Q  + +   +D  
Sbjct  15157  NIPGGA---EEISEVLDSLENLMR----------------HSEDNPNQIRILAQTLTDGG  15035

Query  313    V---LLQRRLDNMNFKWSELRKKSLNIRSHLEAS----SDQWKRLHLSLQELLVWL  361
              V   L+   L+  N +W EL ++++  +  LE S     +  K LHL +QE L ++
Sbjct  15034  VMDELINEELETFNSRWRELHEEAVRRQKLLEQSIQSAQETEKSLHL-IQESLTFI  14870


 Score = 43.1 bits (100),  Expect = 0.86, Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 133/281 (47%), Gaps = 42/281 (14%)
 Frame = -2

Query  22     LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
              LT+WL+  D  +  +  + G   +++  +   KAT +++E+++  L+ +    + LK   
Sbjct  14290  LTEWLAATDMELTKRSAVEGMPSNLDSEVAWGKATQKEIEKQKVHLKSITEVGEALKTVL  14111

Query  82     SNQEARTIITDRIERIQNQWD--------------EVQEHLQNRRQQLNEMLKDSTQWLE  127
                +E  T++ D++  + + W               E Q+H++   Q ++ +    T+W+ 
Sbjct  14110  GKKE--TLVEDKLSLLNSNWIAVTSRAEEWLNLLLEYQKHMETFDQNVDHI----TKWI-  13952

Query  128    AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
                 +A+ +L       ES K+ P      Q+K    K+L  +L   +  VD   D A  L
Sbjct  13951  --IQADTLLD------ESEKKKP------QQKEDVLKRLKAELNDIRPKVDSTRDQAANL  13814

Query  188    LRDYSADDTRK-VHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
              + +   D  RK V      +N  + +I  R+   +A++    + L+QF  D++K L  L 
Sbjct  13813  MAN-RGDHCRKLVEPQISELNHRFAAISHRIKTGKASI--PLKELEQFNSDIQKLLEPL-  13646

Query  247    EAETTANV-LQDATRKERLLEDSKG-VKELMKQWQDLQGEI  285
              EAE    V L++    + + ED++G VKEL+++  +LQ  I
Sbjct  13645  EAEIQQGVNLKEEDFNKDMNEDNEGTVKELLQRGDNLQQRI  13523


>gb|M18533.1|HUMDYS Homo sapiens dystrophin (DMD) mRNA, complete cds
Length=13957

 Score = 2486 bits (6443),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1200/1215 (98%), Positives = 1200/1215 (98%), Gaps = 13/1215 (1%)
 Frame = +2

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
              MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  7589   MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  7768

Query  61     EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
              EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  7769   EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  7948

Query  121    DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA
Sbjct  7949   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  8128

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK
Sbjct  8129   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  8308

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ
Sbjct  8309   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  8488

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
              KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  8489   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  8668

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  8669   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  8848

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ
Sbjct  8849   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  9028

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
              EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR
Sbjct  9029   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  9208

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  9209   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  9388

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  9389   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  9568

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  9569   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  9748

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  9749   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  9928

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  9929   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  10108

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  10109  VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  10288

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
              TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  10289  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  10468

Query  949    -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
               PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  10469  APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  10648

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
              QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  10649  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  10828

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  10829  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  11008

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM
Sbjct  11009  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  11188

Query  1188   EQLNNSFPSSRGHNV  1202
              EQLNNSFPSSRG N 
Sbjct  11189  EQLNNSFPSSRGRNT  11233


 Score = 71.6 bits (174),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/33 (100%), Positives = 33/33 (100%), Gaps = 0/33 (0%)
 Frame = +1

Query  1198   RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
              RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  11251  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  11349


 Score = 59.3 bits (142),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 81/382 (21%), Positives = 175/382 (45%), Gaps = 54/382 (14%)
 Frame = +2

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             +PS+ + E+          T ++  L  ++Q++ +  +   D ED+     KQ+ +++++
Sbjct  6194  VPSTYLTEI----------THVSQALLEVEQLLNAPDLCAKDFEDL----FKQEESLKNI  6331

Query  61    E---QRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNE  117
             +   Q+     ++I + +    +++    R  + + + ++  QW++V +  ++R+ + + 
Sbjct  6332  KDSLQQSSGRIDIIHSKKTAALQSATPVERVKLQEALSQLDFQWEKVNKMYKDRQGRFDR  6511

Query  118   M----------LKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLA  167
                        +K   QWL    EAEQ L + +   E+W+   Y            K+L 
Sbjct  6512  SVEKWRRFHYDIKIFNQWLT---EAEQFLRKTQIP-ENWEHAKYK--------WYLKELQ  6655

Query  168   KDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEET  227
               + Q QT V   N    ++++  S  D   +     ++N  W+ + K++S+R+  LEE 
Sbjct  6656  DGIGQRQTVVRTLNATGEEIIQQSSKTDASILQEKLGSLNLRWQEVCKQLSDRKKRLEEQ  6835

Query  228   HRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEA  287
               +L +F  DL +F+ WL EA+  A++  +  ++++L E  + VK L+++    QG    
Sbjct  6836  KNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVEELPLRQG----  7003

Query  288   HTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ  346
                +   L+E    +L S   S ++   L+ +L   N +W ++ +     +  +EA    
Sbjct  7004  ---ILKQLNETGGPVLVSAPISPEEQDKLENKLKQTNLQWIKVSRALPEKQGEIEAQIKD  7174

Query  347   WKRLHLSLQE-------LLVWL  361
               +L   L++       LL+WL
Sbjct  7175  LGQLEKKLEDLEEQLNHLLLWL  7240


 Score = 45.8 bits (107),  Expect = 0.13, Method: Compositional matrix adjust.
 Identities = 91/422 (21%), Positives = 180/422 (42%), Gaps = 48/422 (11%)
 Frame = +2

Query  154   DAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSI  213
             + +++++ E + L   L++ Q+ +   +    ++ +   ++ +RK     E I   W+ +
Sbjct  3125  EIMEQRLGELQALQSSLQEQQSGLYYLSTTVKEMSKKAPSEISRKYQSEFEEIEGRWKKL  3304

Query  214   HKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER--LLEDSKGV  271
               ++ E    LEE    L++    ++    W+ E         D   KE    L DS+ +
Sbjct  3305  SSQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEV--------DVFLKEEWPALGDSEIL  3460

Query  272   KELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRK  331
             K+ +KQ + L  +I+      ++++E  QKI    E  + A  L+  L  +N +W  + +
Sbjct  3461  KKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEAE-PEFASRLETELKELNTQWDHMCQ  3637

Query  332   KSLNIRSHLEASSDQWKRLHLSLQELLVWL-QLKDDELSRQAPIGGDFP-----AVQKQN  385
             +    +  L+   ++   L   L E+  W+ Q +++ L R      DF       +QK  
Sbjct  3638  QVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAEEEYLER------DFEYKTPDELQKAV  3799

Query  386   DVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLR  445
             +  +  K E + KE  +    E+V   + + P    E L +E   L      Q +   L 
Sbjct  3800  EEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEALKKELETLTT--NYQWLCTRLN  3973

Query  446   KQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGD  505
              + + +   W       A W     E L  L++  +  +E++ KL+  E I G  + + +
Sbjct  3974  GKCKTLEEVW-------ACWH----ELLSYLEKANKWLNEVEFKLKTTENIPGGAEEISE  4120

Query  506   LLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWK  565
             +L DSL++ +             ++N + +  LA+ LT  G+     N   LE  N+RW+
Sbjct  4121  VL-DSLENLMRHS----------EDNPNQIRILAQTLTDGGVMDELIN-EELETFNSRWR  4264

Query  566   LL  567
              L
Sbjct  4265  EL  4270


 Score = 44.3 bits (103),  Expect = 0.41, Method: Compositional matrix adjust.
 Identities = 79/356 (22%), Positives = 155/356 (43%), Gaps = 42/356 (11%)
 Frame = +2

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             L  W++ +D  +K +   +GD E + + + + +  + D++  +P L  +    Q +KN+ 
Sbjct  3386  LKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEA  3565

Query  82    SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
               + A  + T+ ++ +  QWD + + +  R++ L   L+ +    +   E  + + QA  
Sbjct  3566  EPEFASRLETE-LKELNTQWDHMCQQVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAE-  3739

Query  142   KLESWKEGPY---TVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS--ADDT  196
               E + E  +   T D +QK + E K+  ++ +Q +  V +  +    ++      A + 
Sbjct  3740  --EEYLERDFEYKTPDELQKAVEEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEA  3913

Query  197   RKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAE----TTA  252
              K  + T   N  W  +  R++ +   LEE      +    LEK   WL E E    TT 
Sbjct  3914  LKKELETLTTNYQW--LCTRLNGKCKTLEEVWACWHELLSYLEKANKWLNEVEFKLKTTE  4087

Query  253   NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDA  312
             N+   A   E + E    ++ LM+                H+ D  +Q  + +   +D  
Sbjct  4088  NIPGGA---EEISEVLDSLENLMR----------------HSEDNPNQIRILAQTLTDGG  4210

Query  313   V---LLQRRLDNMNFKWSELRKKSLNIRSHLEAS----SDQWKRLHLSLQELLVWL  361
             V   L+   L+  N +W EL ++++  +  LE S     +  K LHL +QE L ++
Sbjct  4211  VMDELINEELETFNSRWRELHEEAVRRQKLLEQSIQSAQETEKSLHL-IQESLTFI  4375


 Score = 43.1 bits (100),  Expect = 0.86, Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 133/281 (47%), Gaps = 42/281 (14%)
 Frame = +2

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             LT+WL+  D  +  +  + G   +++  +   KAT +++E+++  L+ +    + LK   
Sbjct  4955  LTEWLAATDMELTKRSAVEGMPSNLDSEVAWGKATQKEIEKQKVHLKSITEVGEALKTVL  5134

Query  82    SNQEARTIITDRIERIQNQWD--------------EVQEHLQNRRQQLNEMLKDSTQWLE  127
               +E  T++ D++  + + W               E Q+H++   Q ++ +    T+W+ 
Sbjct  5135  GKKE--TLVEDKLSLLNSNWIAVTSRAEEWLNLLLEYQKHMETFDQNVDHI----TKWI-  5293

Query  128   AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
                +A+ +L       ES K+ P      Q+K    K+L  +L   +  VD   D A  L
Sbjct  5294  --IQADTLLD------ESEKKKP------QQKEDVLKRLKAELNDIRPKVDSTRDQAANL  5431

Query  188   LRDYSADDTRK-VHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
             + +   D  RK V      +N  + +I  R+   +A++    + L+QF  D++K L  L 
Sbjct  5432  MAN-RGDHCRKLVEPQISELNHRFAAISHRIKTGKASI--PLKELEQFNSDIQKLLEPL-  5599

Query  247   EAETTANV-LQDATRKERLLEDSKG-VKELMKQWQDLQGEI  285
             EAE    V L++    + + ED++G VKEL+++  +LQ  I
Sbjct  5600  EAEIQQGVNLKEEDFNKDMNEDNEGTVKELLQRGDNLQQRI  5722


>emb|X14298.1| Human mRNA for dystrophin
Length=12446

 Score = 2486 bits (6442),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1200/1215 (98%), Positives = 1200/1215 (98%), Gaps = 13/1215 (1%)
 Frame = +3

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
              MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  7479   MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  7658

Query  61     EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
              EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  7659   EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  7838

Query  121    DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA
Sbjct  7839   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  8018

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK
Sbjct  8019   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  8198

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ
Sbjct  8199   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  8378

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
              KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  8379   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  8558

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  8559   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  8738

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ
Sbjct  8739   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  8918

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
              EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR
Sbjct  8919   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  9098

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  9099   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  9278

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  9279   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  9458

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  9459   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  9638

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  9639   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  9818

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  9819   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  9998

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  9999   VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  10178

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
              TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  10179  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  10358

Query  949    -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
               PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  10359  APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  10538

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
              QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  10539  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  10718

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  10719  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  10898

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM
Sbjct  10899  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  11078

Query  1188   EQLNNSFPSSRGHNV  1202
              EQLNNSFPSSRG N 
Sbjct  11079  EQLNNSFPSSRGRNT  11123


 Score = 71.6 bits (174),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/33 (100%), Positives = 33/33 (100%), Gaps = 0/33 (0%)
 Frame = +2

Query  1198   RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
              RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  11141  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  11239


 Score = 59.7 bits (143),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 81/382 (21%), Positives = 175/382 (45%), Gaps = 54/382 (14%)
 Frame = +3

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             +PS+ + E+          T ++  L  ++Q++ +  +   D ED+     KQ+ +++++
Sbjct  6084  VPSTYLTEI----------THVSQALLEVEQLLNAPDLCAKDFEDL----FKQEESLKNI  6221

Query  61    E---QRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNE  117
             +   Q+     ++I + +    +++    R  + + + ++  QW++V +  ++R+ + + 
Sbjct  6222  KDSLQQSSGRIDIIHSKKTAALQSATPVERVKLQEALSQLDFQWEKVNKMYKDRQGRFDR  6401

Query  118   M----------LKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLA  167
                        +K   QWL    EAEQ L + +   E+W+   Y            K+L 
Sbjct  6402  SVEKWRRFHYDIKIFNQWLT---EAEQFLRKTQIP-ENWEHAKYK--------WYLKELQ  6545

Query  168   KDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEET  227
               + Q QT V   N    ++++  S  D   +     ++N  W+ + K++S+R+  LEE 
Sbjct  6546  DGIGQRQTVVRTLNATGEEIIQQSSKTDASILQEKLGSLNLRWQEVCKQLSDRKKRLEEQ  6725

Query  228   HRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEA  287
               +L +F  DL +F+ WL EA+  A++  +  ++++L E  + VK L+++    QG    
Sbjct  6726  KNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVEELPLRQG----  6893

Query  288   HTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ  346
                +   L+E    +L S   S ++   L+ +L   N +W ++ +     +  +EA    
Sbjct  6894  ---ILKQLNETGGPVLVSAPISPEEQDKLENKLKQTNLQWIKVSRALPEKQGEIEAQIKD  7064

Query  347   WKRLHLSLQE-------LLVWL  361
               +L   L++       LL+WL
Sbjct  7065  LGQLEKKLEDLEEQLNHLLLWL  7130


 Score = 46.6 bits (109),  Expect = 0.078, Method: Compositional matrix adjust.
 Identities = 91/423 (21%), Positives = 182/423 (43%), Gaps = 50/423 (11%)
 Frame = +3

Query  154   DAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSI  213
             + +++++ E + L   L++ Q+ +   +    ++ +   ++ +RK     E I   W+ +
Sbjct  3015  EIMEQRLGELQALQSSLQEQQSGLYYLSTTVKEMSKKAPSEISRKYQSEFEEIEGRWKKL  3194

Query  214   HKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER--LLEDSKGV  271
               ++ E    LEE    L++    ++    W+ E         D   KE    L DS+ +
Sbjct  3195  SSQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEV--------DVFLKEEWPALGDSEIL  3350

Query  272   KELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRK  331
             K+ +KQ + L  +I+      ++++E  QKI    E  + A  L+  L  +N +W  + +
Sbjct  3351  KKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEAE-PEFASRLETELKELNTQWDHMCQ  3527

Query  332   KSLNIRSHLEASSDQWKRLHLSLQELLVWL-QLKDDELSRQAPIGGDFPAVQKQNDVHRA  390
             +    +  L+   ++   L   L E+  W+ Q +++ L R      DF   +  +++ +A
Sbjct  3528  QVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAEEEYLER------DF-EYKTPDELQKA  3686

Query  391   F------KRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLL  444
             F      K E + KE  +    E+V   + + P    E L +E   L      Q +   L
Sbjct  3687  FEEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEALKKELETLTT--NYQWLCTRL  3860

Query  445   RKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVG  504
               + + +   W       A W     E L  L++  +  +E++ KL+  E I G  + + 
Sbjct  3861  NGKCKTLEEVW-------ACWH----ELLSYLEKANKWLNEVEFKLKTTENIPGGAEEIS  4007

Query  505   DLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRW  564
             ++L DSL++ +             ++N + +  LA+ LT  G+     N   LE  N+RW
Sbjct  4008  EVL-DSLENLMRHS----------EDNPNQIRILAQTLTDGGVMDELIN-EELETFNSRW  4151

Query  565   KLL  567
             + L
Sbjct  4152  REL  4160


 Score = 44.7 bits (104),  Expect = 0.35, Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 134/281 (47%), Gaps = 42/281 (14%)
 Frame = +3

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             LT+WL+  D  +  +  + G   +++  +   KAT +++E+++  L+ +    + LK   
Sbjct  4845  LTEWLAATDMELTKRSAVEGMPSNLDSEVAWGKATQKEIEKQKVHLKSITEVGEALKTVL  5024

Query  82    SNQEARTIITDRIERIQNQWD--------------EVQEHLQNRRQQLNEMLKDSTQWLE  127
               +E  T++ D++  + + W               E Q+H++   Q ++ +    T+W+ 
Sbjct  5025  GKKE--TLVEDKLSLLNSNWIAVTSRAEEWLNLLLEYQKHMETFDQNVDHI----TKWI-  5183

Query  128   AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
                +A+ +L       ES K+ P      Q+K    K+L  +L   +  VD   D A  L
Sbjct  5184  --IQADTLLD------ESEKKKP------QQKEDVLKRLKAELNDIRPKVDSTRDQAANL  5321

Query  188   LRDYSADDTRK-VHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
             + ++  D  RK V      +N  + +I  R+   +A++    + L+QF  D++K L  L 
Sbjct  5322  MANH-GDHCRKLVEPQISELNHRFAAISHRIKTGKASI--PLKELEQFNSDIQKLLEPL-  5489

Query  247   EAETTANV-LQDATRKERLLEDSKG-VKELMKQWQDLQGEI  285
             EAE    V L++    + + ED++G VKEL+++  +LQ  I
Sbjct  5490  EAEIQQGVNLKEEDFNKDMNEDNEGTVKELLQRGDNLQQRI  5612


 Score = 42.4 bits (98),  Expect = 1.6, Method: Compositional matrix adjust.
 Identities = 72/334 (21%), Positives = 143/334 (42%), Gaps = 37/334 (11%)
 Frame = +3

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             L  W++ +D  +K +   +GD E + + + + +  + D++  +P L  +    Q +KN+ 
Sbjct  3276  LKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEA  3455

Query  82    SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
               + A  + T+ ++ +  QWD + + +  R++ L   L+ +    +   E  + + QA  
Sbjct  3456  EPEFASRLETE-LKELNTQWDHMCQQVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAE-  3629

Query  142   KLESWKEGPY---TVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS--ADDT  196
               E + E  +   T D +QK   E K+  ++ +Q +  V +  +    ++      A + 
Sbjct  3630  --EEYLERDFEYKTPDELQKAFEEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEA  3803

Query  197   RKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAE----TTA  252
              K  + T   N  W  +  R++ +   LEE      +    LEK   WL E E    TT 
Sbjct  3804  LKKELETLTTNYQW--LCTRLNGKCKTLEEVWACWHELLSYLEKANKWLNEVEFKLKTTE  3977

Query  253   NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDA  312
             N+   A   E + E    ++ LM+                H+ D  +Q  + +   +D  
Sbjct  3978  NIPGGA---EEISEVLDSLENLMR----------------HSEDNPNQIRILAQTLTDGG  4100

Query  313   V---LLQRRLDNMNFKWSELRKKSLNIRSHLEAS  343
             V   L+   L+  N +W EL ++++  +  LE S
Sbjct  4101  VMDELINEELETFNSRWRELHEEAVRRQKLLEQS  4202


>gb|BC111836.3| Synthetic construct Homo sapiens clone IMAGE:40080640, MGC:133428 
DMD protein (DMD) mRNA, encodes complete protein
Length=11116

 Score = 2485 bits (6441),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1201/1226 (97%), Positives = 1203/1226 (98%), Gaps = 13/1226 (1%)
 Frame = +2

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
              MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  7415   MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  7594

Query  61     EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
              EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  7595   EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  7774

Query  121    DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA
Sbjct  7775   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  7954

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK
Sbjct  7955   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  8134

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ
Sbjct  8135   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  8314

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
              KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  8315   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  8494

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  8495   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  8674

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERL+ELQ
Sbjct  8675   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLRELQ  8854

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
              EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR
Sbjct  8855   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  9034

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  9035   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  9214

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  9215   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  9394

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  9395   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  9574

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  9575   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  9754

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  9755   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  9934

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  9935   VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  10114

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
              TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  10115  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  10294

Query  949    -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
               PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  10295  APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  10474

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
              QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  10475  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  10654

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  10655  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  10834

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM
Sbjct  10835  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  11014

Query  1188   EQLNNSFPSSRGHNVGSLFHMADDLG  1213
              EQLNNSFPSSRG N        D +G
Sbjct  11015  EQLNNSFPSSRGRNTPGKPMREDTMG  11092


 Score = 59.7 bits (143),  Expect = 9e-06, Method: Compositional matrix adjust.
 Identities = 81/382 (21%), Positives = 175/382 (45%), Gaps = 54/382 (14%)
 Frame = +2

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             +PS+ + E+          T ++  L  ++Q++ +  +   D ED+     KQ+ +++++
Sbjct  6020  VPSTYLTEI----------THVSQALLEVEQLLNAPDLCAKDFEDL----FKQEESLKNI  6157

Query  61    E---QRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNE  117
             +   Q+     ++I + +    +++    R  + + + ++  QW++V +  ++R+ + + 
Sbjct  6158  KDSLQQSSGRIDIIHSKKTAALQSATPVERVKLQEALSQLDFQWEKVNKMYKDRQGRFDR  6337

Query  118   M----------LKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLA  167
                        +K   QWL    EAEQ L + +   E+W+   Y            K+L 
Sbjct  6338  SVEKWRRFHYDIKIFNQWLT---EAEQFLRKTQIP-ENWEHAKYK--------WYLKELQ  6481

Query  168   KDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEET  227
               + Q QT V   N    ++++  S  D   +     ++N  W+ + K++S+R+  LEE 
Sbjct  6482  DGIGQRQTVVRTLNATGEEIIQQSSKTDASILQEKLGSLNLRWQEVCKQLSDRKKRLEEQ  6661

Query  228   HRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEA  287
               +L +F  DL +F+ WL EA+  A++  +  ++++L E  + VK L+++    QG    
Sbjct  6662  KNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVEELPLRQG----  6829

Query  288   HTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ  346
                +   L+E    +L S   S ++   L+ +L   N +W ++ +     +  +EA    
Sbjct  6830  ---ILKQLNETGGPVLVSAPISPEEQDKLENKLKQTNLQWIKVSRALPEKQGEIEAQIKD  7000

Query  347   WKRLHLSLQE-------LLVWL  361
               +L   L++       LL+WL
Sbjct  7001  LGQLEKKLEDLEEQLNHLLLWL  7066


 Score = 46.6 bits (109),  Expect = 0.096, Method: Compositional matrix adjust.
 Identities = 91/422 (21%), Positives = 180/422 (42%), Gaps = 48/422 (11%)
 Frame = +2

Query  154   DAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSI  213
             + +++++ E + L   L++ Q+ +   +    ++ +   ++ +RK     E I   W+ +
Sbjct  2951  EIMEQRLGELQALQSSLQEQQSGLYYLSTTVKEMSKKAPSEISRKYQSEFEEIEGRWKKL  3130

Query  214   HKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER--LLEDSKGV  271
               ++ E    LEE    L++    ++    W+ E         D   KE    L DS+ +
Sbjct  3131  SSQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEV--------DVFLKEEWPALGDSEIL  3286

Query  272   KELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRK  331
             K+ +KQ + L  +I+      ++++E  QKI    E  + A  L+  L  +N +W  + +
Sbjct  3287  KKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEAE-PEFASRLETELKELNTQWDHMCQ  3463

Query  332   KSLNIRSHLEASSDQWKRLHLSLQELLVWL-QLKDDELSRQAPIGGDFP-----AVQKQN  385
             +    +  L+   ++   L   L E+  W+ Q +++ L R      DF       +QK  
Sbjct  3464  QVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAEEEYLER------DFEYKTPDELQKAV  3625

Query  386   DVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLR  445
             +  +  K E + KE  +    E+V   + + P    E L +E   L      Q +   L 
Sbjct  3626  EEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEALKKELETLTT--NYQWLCTRLN  3799

Query  446   KQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGD  505
              + + +   W       A W     E L  L++  +  +E++ KL+  E I G  + + +
Sbjct  3800  GKCKTLEEVW-------ACWH----ELLSYLEKANKWLNEVEFKLKTTENIPGGAEEISE  3946

Query  506   LLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWK  565
             +L DSL++ +             ++N + +  LA+ LT  G+     N   LE  N+RW+
Sbjct  3947  VL-DSLENLMRHS----------EDNPNQIRILAQTLTDGGVMDELIN-EELETFNSRWR  4090

Query  566   LL  567
              L
Sbjct  4091  EL  4096


 Score = 44.7 bits (104),  Expect = 0.32, Method: Compositional matrix adjust.
 Identities = 79/356 (22%), Positives = 155/356 (43%), Gaps = 42/356 (11%)
 Frame = +2

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             L  W++ +D  +K +   +GD E + + + + +  + D++  +P L  +    Q +KN+ 
Sbjct  3212  LKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEA  3391

Query  82    SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
               + A  + T+ ++ +  QWD + + +  R++ L   L+ +    +   E  + + QA  
Sbjct  3392  EPEFASRLETE-LKELNTQWDHMCQQVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAE-  3565

Query  142   KLESWKEGPY---TVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS--ADDT  196
               E + E  +   T D +QK + E K+  ++ +Q +  V +  +    ++      A + 
Sbjct  3566  --EEYLERDFEYKTPDELQKAVEEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEA  3739

Query  197   RKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAE----TTA  252
              K  + T   N  W  +  R++ +   LEE      +    LEK   WL E E    TT 
Sbjct  3740  LKKELETLTTNYQW--LCTRLNGKCKTLEEVWACWHELLSYLEKANKWLNEVEFKLKTTE  3913

Query  253   NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDA  312
             N+   A   E + E    ++ LM+                H+ D  +Q  + +   +D  
Sbjct  3914  NIPGGA---EEISEVLDSLENLMR----------------HSEDNPNQIRILAQTLTDGG  4036

Query  313   V---LLQRRLDNMNFKWSELRKKSLNIRSHLEAS----SDQWKRLHLSLQELLVWL  361
             V   L+   L+  N +W EL ++++  +  LE S     +  K LHL +QE L ++
Sbjct  4037  VMDELINEELETFNSRWRELHEEAVRRQKLLEQSIQSAQETEKSLHL-IQESLTFI  4201


 Score = 43.5 bits (101),  Expect = 0.71, Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 133/281 (47%), Gaps = 42/281 (14%)
 Frame = +2

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             LT+WL+  D  +  +  + G   +++  +   KAT +++E+++  L+ +    + LK   
Sbjct  4781  LTEWLAATDMELTKRSAVEGMPSNLDSEVAWGKATQKEIEKQKVHLKSITEVGEALKTVL  4960

Query  82    SNQEARTIITDRIERIQNQWD--------------EVQEHLQNRRQQLNEMLKDSTQWLE  127
               +E  T++ D++  + + W               E Q+H++   Q ++ +    T+W+ 
Sbjct  4961  GKKE--TLVEDKLSLLNSNWIAVTSRAEEWLNLLLEYQKHMETFDQNVDHI----TKWI-  5119

Query  128   AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
                +A+ +L       ES K+ P      Q+K    K+L  +L   +  VD   D A  L
Sbjct  5120  --IQADTLLD------ESEKKKP------QQKEDVLKRLKAELNDIRPKVDSTRDQAANL  5257

Query  188   LRDYSADDTRK-VHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
             + +   D  RK V      +N  + +I  R+   +A++    + L+QF  D++K L  L 
Sbjct  5258  MAN-RGDHCRKLVEPQISELNHRFAAISHRIKTGKASI--PLKELEQFNSDIQKLLEPL-  5425

Query  247   EAETTANV-LQDATRKERLLEDSKG-VKELMKQWQDLQGEI  285
             EAE    V L++    + + ED++G VKEL+++  +LQ  I
Sbjct  5426  EAEIQQGVNLKEEDFNKDMNEDNEGTVKELLQRGDNLQQRI  5548


>gb|BC118002.1| Synthetic construct Homo sapiens clone IMAGE:40080832, MGC:133386 
DMD protein (DMD) mRNA, encodes complete protein
Length=11116

 Score = 2485 bits (6441),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1201/1226 (97%), Positives = 1203/1226 (98%), Gaps = 13/1226 (1%)
 Frame = +2

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
              MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  7415   MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  7594

Query  61     EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
              EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  7595   EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  7774

Query  121    DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA
Sbjct  7775   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  7954

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK
Sbjct  7955   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  8134

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ
Sbjct  8135   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  8314

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
              KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  8315   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  8494

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  8495   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  8674

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERL+ELQ
Sbjct  8675   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLRELQ  8854

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
              EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR
Sbjct  8855   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  9034

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  9035   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  9214

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  9215   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  9394

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  9395   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  9574

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  9575   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  9754

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  9755   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  9934

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  9935   VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  10114

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
              TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  10115  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  10294

Query  949    -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
               PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  10295  APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  10474

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
              QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  10475  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  10654

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  10655  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  10834

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM
Sbjct  10835  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  11014

Query  1188   EQLNNSFPSSRGHNVGSLFHMADDLG  1213
              EQLNNSFPSSRG N        D +G
Sbjct  11015  EQLNNSFPSSRGRNTPGKPMREDTMG  11092


 Score = 59.7 bits (143),  Expect = 9e-06, Method: Compositional matrix adjust.
 Identities = 81/382 (21%), Positives = 175/382 (45%), Gaps = 54/382 (14%)
 Frame = +2

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             +PS+ + E+          T ++  L  ++Q++ +  +   D ED+     KQ+ +++++
Sbjct  6020  VPSTYLTEI----------THVSQALLEVEQLLNAPDLCAKDFEDL----FKQEESLKNI  6157

Query  61    E---QRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNE  117
             +   Q+     ++I + +    +++    R  + + + ++  QW++V +  ++R+ + + 
Sbjct  6158  KDSLQQSSGRIDIIHSKKTAALQSATPVERVKLQEALSQLDFQWEKVNKMYKDRQGRFDR  6337

Query  118   M----------LKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLA  167
                        +K   QWL    EAEQ L + +   E+W+   Y            K+L 
Sbjct  6338  SVEKWRRFHYDIKIFNQWLT---EAEQFLRKTQIP-ENWEHAKYK--------WYLKELQ  6481

Query  168   KDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEET  227
               + Q QT V   N    ++++  S  D   +     ++N  W+ + K++S+R+  LEE 
Sbjct  6482  DGIGQRQTVVRTLNATGEEIIQQSSKTDASILQEKLGSLNLRWQEVCKQLSDRKKRLEEQ  6661

Query  228   HRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEA  287
               +L +F  DL +F+ WL EA+  A++  +  ++++L E  + VK L+++    QG    
Sbjct  6662  KNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVEELPLRQG----  6829

Query  288   HTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ  346
                +   L+E    +L S   S ++   L+ +L   N +W ++ +     +  +EA    
Sbjct  6830  ---ILKQLNETGGPVLVSAPISPEEQDKLENKLKQTNLQWIKVSRALPEKQGEIEAQIKD  7000

Query  347   WKRLHLSLQE-------LLVWL  361
               +L   L++       LL+WL
Sbjct  7001  LGQLEKKLEDLEEQLNHLLLWL  7066


 Score = 46.6 bits (109),  Expect = 0.096, Method: Compositional matrix adjust.
 Identities = 91/422 (21%), Positives = 180/422 (42%), Gaps = 48/422 (11%)
 Frame = +2

Query  154   DAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSI  213
             + +++++ E + L   L++ Q+ +   +    ++ +   ++ +RK     E I   W+ +
Sbjct  2951  EIMEQRLGELQALQSSLQEQQSGLYYLSTTVKEMSKKAPSEISRKYQSEFEEIEGRWKKL  3130

Query  214   HKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER--LLEDSKGV  271
               ++ E    LEE    L++    ++    W+ E         D   KE    L DS+ +
Sbjct  3131  SSQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEV--------DVFLKEEWPALGDSEIL  3286

Query  272   KELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRK  331
             K+ +KQ + L  +I+      ++++E  QKI    E  + A  L+  L  +N +W  + +
Sbjct  3287  KKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEAE-PEFASRLETELKELNTQWDHMCQ  3463

Query  332   KSLNIRSHLEASSDQWKRLHLSLQELLVWL-QLKDDELSRQAPIGGDFP-----AVQKQN  385
             +    +  L+   ++   L   L E+  W+ Q +++ L R      DF       +QK  
Sbjct  3464  QVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAEEEYLER------DFEYKTPDELQKAV  3625

Query  386   DVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLR  445
             +  +  K E + KE  +    E+V   + + P    E L +E   L      Q +   L 
Sbjct  3626  EEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEALKKELETLTT--NYQWLCTRLN  3799

Query  446   KQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGD  505
              + + +   W       A W     E L  L++  +  +E++ KL+  E I G  + + +
Sbjct  3800  GKCKTLEEVW-------ACWH----ELLSYLEKANKWLNEVEFKLKTTENIPGGAEEISE  3946

Query  506   LLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWK  565
             +L DSL++ +             ++N + +  LA+ LT  G+     N   LE  N+RW+
Sbjct  3947  VL-DSLENLMRHS----------EDNPNQIRILAQTLTDGGVMDELIN-EELETFNSRWR  4090

Query  566   LL  567
              L
Sbjct  4091  EL  4096


 Score = 44.7 bits (104),  Expect = 0.32, Method: Compositional matrix adjust.
 Identities = 79/356 (22%), Positives = 155/356 (43%), Gaps = 42/356 (11%)
 Frame = +2

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             L  W++ +D  +K +   +GD E + + + + +  + D++  +P L  +    Q +KN+ 
Sbjct  3212  LKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEA  3391

Query  82    SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
               + A  + T+ ++ +  QWD + + +  R++ L   L+ +    +   E  + + QA  
Sbjct  3392  EPEFASRLETE-LKELNTQWDHMCQQVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAE-  3565

Query  142   KLESWKEGPY---TVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS--ADDT  196
               E + E  +   T D +QK + E K+  ++ +Q +  V +  +    ++      A + 
Sbjct  3566  --EEYLERDFEYKTPDELQKAVEEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEA  3739

Query  197   RKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAE----TTA  252
              K  + T   N  W  +  R++ +   LEE      +    LEK   WL E E    TT 
Sbjct  3740  LKKELETLTTNYQW--LCTRLNGKCKTLEEVWACWHELLSYLEKANKWLNEVEFKLKTTE  3913

Query  253   NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDA  312
             N+   A   E + E    ++ LM+                H+ D  +Q  + +   +D  
Sbjct  3914  NIPGGA---EEISEVLDSLENLMR----------------HSEDNPNQIRILAQTLTDGG  4036

Query  313   V---LLQRRLDNMNFKWSELRKKSLNIRSHLEAS----SDQWKRLHLSLQELLVWL  361
             V   L+   L+  N +W EL ++++  +  LE S     +  K LHL +QE L ++
Sbjct  4037  VMDELINEELETFNSRWRELHEEAVRRQKLLEQSIQSAQETEKSLHL-IQESLTFI  4201


 Score = 43.5 bits (101),  Expect = 0.71, Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 133/281 (47%), Gaps = 42/281 (14%)
 Frame = +2

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             LT+WL+  D  +  +  + G   +++  +   KAT +++E+++  L+ +    + LK   
Sbjct  4781  LTEWLAATDMELTKRSAVEGMPSNLDSEVAWGKATQKEIEKQKVHLKSITEVGEALKTVL  4960

Query  82    SNQEARTIITDRIERIQNQWD--------------EVQEHLQNRRQQLNEMLKDSTQWLE  127
               +E  T++ D++  + + W               E Q+H++   Q ++ +    T+W+ 
Sbjct  4961  GKKE--TLVEDKLSLLNSNWIAVTSRAEEWLNLLLEYQKHMETFDQNVDHI----TKWI-  5119

Query  128   AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
                +A+ +L       ES K+ P      Q+K    K+L  +L   +  VD   D A  L
Sbjct  5120  --IQADTLLD------ESEKKKP------QQKEDVLKRLKAELNDIRPKVDSTRDQAANL  5257

Query  188   LRDYSADDTRK-VHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
             + +   D  RK V      +N  + +I  R+   +A++    + L+QF  D++K L  L 
Sbjct  5258  MAN-RGDHCRKLVEPQISELNHRFAAISHRIKTGKASI--PLKELEQFNSDIQKLLEPL-  5425

Query  247   EAETTANV-LQDATRKERLLEDSKG-VKELMKQWQDLQGEI  285
             EAE    V L++    + + ED++G VKEL+++  +LQ  I
Sbjct  5426  EAEIQQGVNLKEEDFNKDMNEDNEGTVKELLQRGDNLQQRI  5548


>gb|BC111934.1| Synthetic construct Homo sapiens clone IMAGE:40080736, MGC:133449 
DMD protein (DMD) mRNA, encodes complete protein
Length=11116

 Score = 2485 bits (6441),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1201/1226 (97%), Positives = 1203/1226 (98%), Gaps = 13/1226 (1%)
 Frame = +2

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
              MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  7415   MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  7594

Query  61     EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
              EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  7595   EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  7774

Query  121    DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA
Sbjct  7775   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  7954

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK
Sbjct  7955   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  8134

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ
Sbjct  8135   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  8314

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
              KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  8315   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  8494

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  8495   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  8674

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERL+ELQ
Sbjct  8675   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLRELQ  8854

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
              EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR
Sbjct  8855   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  9034

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  9035   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  9214

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  9215   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  9394

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  9395   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  9574

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  9575   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  9754

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  9755   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  9934

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  9935   VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  10114

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
              TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  10115  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  10294

Query  949    -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
               PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  10295  APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  10474

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
              QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  10475  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  10654

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  10655  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  10834

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM
Sbjct  10835  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  11014

Query  1188   EQLNNSFPSSRGHNVGSLFHMADDLG  1213
              EQLNNSFPSSRG N        D +G
Sbjct  11015  EQLNNSFPSSRGRNTPGKPMREDTMG  11092


 Score = 59.7 bits (143),  Expect = 9e-06, Method: Compositional matrix adjust.
 Identities = 81/382 (21%), Positives = 175/382 (45%), Gaps = 54/382 (14%)
 Frame = +2

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             +PS+ + E+          T ++  L  ++Q++ +  +   D ED+     KQ+ +++++
Sbjct  6020  VPSTYLTEI----------THVSQALLEVEQLLNAPDLCAKDFEDL----FKQEESLKNI  6157

Query  61    E---QRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNE  117
             +   Q+     ++I + +    +++    R  + + + ++  QW++V +  ++R+ + + 
Sbjct  6158  KDSLQQSSGRIDIIHSKKTAALQSATPVERVKLQEALSQLDFQWEKVNKMYKDRQGRFDR  6337

Query  118   M----------LKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLA  167
                        +K   QWL    EAEQ L + +   E+W+   Y            K+L 
Sbjct  6338  SVEKWRRFHYDIKIFNQWLT---EAEQFLRKTQIP-ENWEHAKYK--------WYLKELQ  6481

Query  168   KDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEET  227
               + Q QT V   N    ++++  S  D   +     ++N  W+ + K++S+R+  LEE 
Sbjct  6482  DGIGQRQTVVRTLNATGEEIIQQSSKTDASILQEKLGSLNLRWQEVCKQLSDRKKRLEEQ  6661

Query  228   HRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEA  287
               +L +F  DL +F+ WL EA+  A++  +  ++++L E  + VK L+++    QG    
Sbjct  6662  KNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVEELPLRQG----  6829

Query  288   HTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ  346
                +   L+E    +L S   S ++   L+ +L   N +W ++ +     +  +EA    
Sbjct  6830  ---ILKQLNETGGPVLVSAPISPEEQDKLENKLKQTNLQWIKVSRALPEKQGEIEAQIKD  7000

Query  347   WKRLHLSLQE-------LLVWL  361
               +L   L++       LL+WL
Sbjct  7001  LGQLEKKLEDLEEQLNHLLLWL  7066


 Score = 46.6 bits (109),  Expect = 0.096, Method: Compositional matrix adjust.
 Identities = 91/422 (21%), Positives = 180/422 (42%), Gaps = 48/422 (11%)
 Frame = +2

Query  154   DAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSI  213
             + +++++ E + L   L++ Q+ +   +    ++ +   ++ +RK     E I   W+ +
Sbjct  2951  EIMEQRLGELQALQSSLQEQQSGLYYLSTTVKEMSKKAPSEISRKYQSEFEEIEGRWKKL  3130

Query  214   HKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER--LLEDSKGV  271
               ++ E    LEE    L++    ++    W+ E         D   KE    L DS+ +
Sbjct  3131  SSQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEV--------DVFLKEEWPALGDSEIL  3286

Query  272   KELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRK  331
             K+ +KQ + L  +I+      ++++E  QKI    E  + A  L+  L  +N +W  + +
Sbjct  3287  KKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEAE-PEFASRLETELKELNTQWDHMCQ  3463

Query  332   KSLNIRSHLEASSDQWKRLHLSLQELLVWL-QLKDDELSRQAPIGGDFP-----AVQKQN  385
             +    +  L+   ++   L   L E+  W+ Q +++ L R      DF       +QK  
Sbjct  3464  QVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAEEEYLER------DFEYKTPDELQKAV  3625

Query  386   DVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLR  445
             +  +  K E + KE  +    E+V   + + P    E L +E   L      Q +   L 
Sbjct  3626  EEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEALKKELETLTT--NYQWLCTRLN  3799

Query  446   KQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGD  505
              + + +   W       A W     E L  L++  +  +E++ KL+  E I G  + + +
Sbjct  3800  GKCKTLEEVW-------ACWH----ELLSYLEKANKWLNEVEFKLKTTENIPGGAEEISE  3946

Query  506   LLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWK  565
             +L DSL++ +             ++N + +  LA+ LT  G+     N   LE  N+RW+
Sbjct  3947  VL-DSLENLMRHS----------EDNPNQIRILAQTLTDGGVMDELIN-EELETFNSRWR  4090

Query  566   LL  567
              L
Sbjct  4091  EL  4096


 Score = 44.7 bits (104),  Expect = 0.32, Method: Compositional matrix adjust.
 Identities = 79/356 (22%), Positives = 155/356 (43%), Gaps = 42/356 (11%)
 Frame = +2

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             L  W++ +D  +K +   +GD E + + + + +  + D++  +P L  +    Q +KN+ 
Sbjct  3212  LKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEA  3391

Query  82    SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
               + A  + T+ ++ +  QWD + + +  R++ L   L+ +    +   E  + + QA  
Sbjct  3392  EPEFASRLETE-LKELNTQWDHMCQQVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAE-  3565

Query  142   KLESWKEGPY---TVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS--ADDT  196
               E + E  +   T D +QK + E K+  ++ +Q +  V +  +    ++      A + 
Sbjct  3566  --EEYLERDFEYKTPDELQKAVEEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEA  3739

Query  197   RKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAE----TTA  252
              K  + T   N  W  +  R++ +   LEE      +    LEK   WL E E    TT 
Sbjct  3740  LKKELETLTTNYQW--LCTRLNGKCKTLEEVWACWHELLSYLEKANKWLNEVEFKLKTTE  3913

Query  253   NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDA  312
             N+   A   E + E    ++ LM+                H+ D  +Q  + +   +D  
Sbjct  3914  NIPGGA---EEISEVLDSLENLMR----------------HSEDNPNQIRILAQTLTDGG  4036

Query  313   V---LLQRRLDNMNFKWSELRKKSLNIRSHLEAS----SDQWKRLHLSLQELLVWL  361
             V   L+   L+  N +W EL ++++  +  LE S     +  K LHL +QE L ++
Sbjct  4037  VMDELINEELETFNSRWRELHEEAVRRQKLLEQSIQSAQETEKSLHL-IQESLTFI  4201


 Score = 43.5 bits (101),  Expect = 0.71, Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 133/281 (47%), Gaps = 42/281 (14%)
 Frame = +2

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             LT+WL+  D  +  +  + G   +++  +   KAT +++E+++  L+ +    + LK   
Sbjct  4781  LTEWLAATDMELTKRSAVEGMPSNLDSEVAWGKATQKEIEKQKVHLKSITEVGEALKTVL  4960

Query  82    SNQEARTIITDRIERIQNQWD--------------EVQEHLQNRRQQLNEMLKDSTQWLE  127
               +E  T++ D++  + + W               E Q+H++   Q ++ +    T+W+ 
Sbjct  4961  GKKE--TLVEDKLSLLNSNWIAVTSRAEEWLNLLLEYQKHMETFDQNVDHI----TKWI-  5119

Query  128   AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
                +A+ +L       ES K+ P      Q+K    K+L  +L   +  VD   D A  L
Sbjct  5120  --IQADTLLD------ESEKKKP------QQKEDVLKRLKAELNDIRPKVDSTRDQAANL  5257

Query  188   LRDYSADDTRK-VHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
             + +   D  RK V      +N  + +I  R+   +A++    + L+QF  D++K L  L 
Sbjct  5258  MAN-RGDHCRKLVEPQISELNHRFAAISHRIKTGKASI--PLKELEQFNSDIQKLLEPL-  5425

Query  247   EAETTANV-LQDATRKERLLEDSKG-VKELMKQWQDLQGEI  285
             EAE    V L++    + + ED++G VKEL+++  +LQ  I
Sbjct  5426  EAEIQQGVNLKEEDFNKDMNEDNEGTVKELLQRGDNLQQRI  5548


>gb|BC111587.2| Synthetic construct Homo sapiens clone IMAGE:40080544, MGC:133407 
DMD protein (DMD) mRNA, encodes complete protein
Length=11119

 Score = 2485 bits (6440),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1199/1215 (98%), Positives = 1200/1215 (98%), Gaps = 13/1215 (1%)
 Frame = +2

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
              MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  7415   MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  7594

Query  61     EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
              EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  7595   EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  7774

Query  121    DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA
Sbjct  7775   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  7954

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK
Sbjct  7955   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  8134

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ
Sbjct  8135   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  8314

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
              KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  8315   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  8494

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  8495   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  8674

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERL+ELQ
Sbjct  8675   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLRELQ  8854

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
              EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR
Sbjct  8855   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  9034

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  9035   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  9214

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  9215   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  9394

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  9395   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  9574

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  9575   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  9754

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  9755   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  9934

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  9935   VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  10114

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
              TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  10115  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  10294

Query  949    -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
               PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  10295  APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  10474

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
              QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  10475  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  10654

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  10655  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  10834

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM
Sbjct  10835  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  11014

Query  1188   EQLNNSFPSSRGHNV  1202
              EQLNNSFPSSRG N 
Sbjct  11015  EQLNNSFPSSRGRNT  11059


 Score = 59.3 bits (142),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 81/382 (21%), Positives = 175/382 (45%), Gaps = 54/382 (14%)
 Frame = +2

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             +PS+ + E+          T ++  L  ++Q++ +  +   D ED+     KQ+ +++++
Sbjct  6020  VPSTYLTEI----------THVSQALLEVEQLLNAPDLCAKDFEDL----FKQEESLKNI  6157

Query  61    E---QRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNE  117
             +   Q+     ++I + +    +++    R  + + + ++  QW++V +  ++R+ + + 
Sbjct  6158  KDSLQQSSGRIDIIHSKKTAALQSATPVERVKLQEALSQLDFQWEKVNKMYKDRQGRFDR  6337

Query  118   M----------LKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLA  167
                        +K   QWL    EAEQ L + +   E+W+   Y            K+L 
Sbjct  6338  SVEKWRRFHYDIKIFNQWLT---EAEQFLRKTQIP-ENWEHAKYK--------WYLKELQ  6481

Query  168   KDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEET  227
               + Q QT V   N    ++++  S  D   +     ++N  W+ + K++S+R+  LEE 
Sbjct  6482  DGIGQRQTVVRTLNATGEEIIQQSSKTDASILQEKLGSLNLRWQEVCKQLSDRKKRLEEQ  6661

Query  228   HRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEA  287
               +L +F  DL +F+ WL EA+  A++  +  ++++L E  + VK L+++    QG    
Sbjct  6662  KNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVEELPLRQG----  6829

Query  288   HTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ  346
                +   L+E    +L S   S ++   L+ +L   N +W ++ +     +  +EA    
Sbjct  6830  ---ILKQLNETGGPVLVSAPISPEEQDKLENKLKQTNLQWIKVSRALPEKQGEIEAQIKD  7000

Query  347   WKRLHLSLQE-------LLVWL  361
               +L   L++       LL+WL
Sbjct  7001  LGQLEKKLEDLEEQLNHLLLWL  7066


 Score = 46.2 bits (108),  Expect = 0.13, Method: Compositional matrix adjust.
 Identities = 91/422 (21%), Positives = 180/422 (42%), Gaps = 48/422 (11%)
 Frame = +2

Query  154   DAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSI  213
             + +++++ E + L   L++ Q+ +   +    ++ +   ++ +RK     E I   W+ +
Sbjct  2951  EIMEQRLGELQALQSSLQEQQSGLYYLSTTVKEMSKKAPSEISRKYQSEFEEIEGRWKKL  3130

Query  214   HKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER--LLEDSKGV  271
               ++ E    LEE    L++    ++    W+ E         D   KE    L DS+ +
Sbjct  3131  SSQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEV--------DVFLKEEWPALGDSEIL  3286

Query  272   KELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRK  331
             K+ +KQ + L  +I+      ++++E  QKI    E  + A  L+  L  +N +W  + +
Sbjct  3287  KKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEAE-PEFASRLETELKELNTQWDHMCQ  3463

Query  332   KSLNIRSHLEASSDQWKRLHLSLQELLVWL-QLKDDELSRQAPIGGDFP-----AVQKQN  385
             +    +  L+   ++   L   L E+  W+ Q +++ L R      DF       +QK  
Sbjct  3464  QVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAEEEYLER------DFEYKTPDELQKAV  3625

Query  386   DVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLR  445
             +  +  K E + KE  +    E+V   + + P    E L +E   L      Q +   L 
Sbjct  3626  EEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEALKKELETLTT--NYQWLCTRLN  3799

Query  446   KQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGD  505
              + + +   W       A W     E L  L++  +  +E++ KL+  E I G  + + +
Sbjct  3800  GKCKTLEEVW-------ACWH----ELLSYLEKANKWLNEVEFKLKTTENIPGGAEEISE  3946

Query  506   LLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWK  565
             +L DSL++ +             ++N + +  LA+ LT  G+     N   LE  N+RW+
Sbjct  3947  VL-DSLENLMRHS----------EDNPNQIRILAQTLTDGGVMDELIN-EELETFNSRWR  4090

Query  566   LL  567
              L
Sbjct  4091  EL  4096


 Score = 44.3 bits (103),  Expect = 0.40, Method: Compositional matrix adjust.
 Identities = 79/356 (22%), Positives = 155/356 (43%), Gaps = 42/356 (11%)
 Frame = +2

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             L  W++ +D  +K +   +GD E + + + + +  + D++  +P L  +    Q +KN+ 
Sbjct  3212  LKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRLLVSDIQTIQPSLNSVNEGGQKIKNEA  3391

Query  82    SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
               + A  + T+ ++ +  QWD + + +  R++ L   L+ +    +   E  + + QA  
Sbjct  3392  EPEFASRLETE-LKELNTQWDHMCQQVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAE-  3565

Query  142   KLESWKEGPY---TVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS--ADDT  196
               E + E  +   T D +QK + E K+  ++ +Q +  V +  +    ++      A + 
Sbjct  3566  --EEYLERDFEYKTPDELQKAVEEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEA  3739

Query  197   RKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAE----TTA  252
              K  + T   N  W  +  R++ +   LEE      +    LEK   WL E E    TT 
Sbjct  3740  LKKELETLTTNYQW--LCTRLNGKCKTLEEVWACWHELLSYLEKANKWLNEVEFKLKTTE  3913

Query  253   NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDA  312
             N+   A   E + E    ++ LM+                H+ D  +Q  + +   +D  
Sbjct  3914  NIPGGA---EEISEVLDSLENLMR----------------HSEDNPNQIRILAQTLTDGG  4036

Query  313   V---LLQRRLDNMNFKWSELRKKSLNIRSHLEAS----SDQWKRLHLSLQELLVWL  361
             V   L+   L+  N +W EL ++++  +  LE S     +  K LHL +QE L ++
Sbjct  4037  VMDELINEELETFNSRWRELHEEAVRRQKLLEQSIQSAQETEKSLHL-IQESLTFI  4201


 Score = 43.1 bits (100),  Expect = 0.85, Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 133/281 (47%), Gaps = 42/281 (14%)
 Frame = +2

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             LT+WL+  D  +  +  + G   +++  +   KAT +++E+++  L+ +    + LK   
Sbjct  4781  LTEWLAATDMELTKRSAVEGMPSNLDSEVAWGKATQKEIEKQKVHLKSITEVGEALKTVL  4960

Query  82    SNQEARTIITDRIERIQNQWD--------------EVQEHLQNRRQQLNEMLKDSTQWLE  127
               +E  T++ D++  + + W               E Q+H++   Q ++ +    T+W+ 
Sbjct  4961  GKKE--TLVEDKLSLLNSNWIAVTSRAEEWLNLLLEYQKHMETFDQNVDHI----TKWI-  5119

Query  128   AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
                +A+ +L       ES K+ P      Q+K    K+L  +L   +  VD   D A  L
Sbjct  5120  --IQADTLLD------ESEKKKP------QQKEDVLKRLKAELNDIRPKVDSTRDQAANL  5257

Query  188   LRDYSADDTRK-VHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
             + +   D  RK V      +N  + +I  R+   +A++    + L+QF  D++K L  L 
Sbjct  5258  MAN-RGDHCRKLVEPQISELNHRFAAISHRIKTGKASI--PLKELEQFNSDIQKLLEPL-  5425

Query  247   EAETTANV-LQDATRKERLLEDSKG-VKELMKQWQDLQGEI  285
             EAE    V L++    + + ED++G VKEL+++  +LQ  I
Sbjct  5426  EAEIQQGVNLKEEDFNKDMNEDNEGTVKELLQRGDNLQQRI  5548


>ref|NM_004012.3| Homo sapiens dystrophin (DMD), transcript variant Dp260-2, mRNA
Length=9914

 Score = 2484 bits (6439),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1200/1215 (98%), Positives = 1200/1215 (98%), Gaps = 13/1215 (1%)
 Frame = +3

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  3546  MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  3725

Query  61    EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
             EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  3726  EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  3905

Query  121   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
             DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA
Sbjct  3906  DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  4085

Query  181   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
             NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK
Sbjct  4086  NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  4265

Query  241   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
             FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ
Sbjct  4266  FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  4445

Query  301   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
             KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  4446  KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  4625

Query  361   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
             LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  4626  LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  4805

Query  421   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
             LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ
Sbjct  4806  LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  4985

Query  481   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
             EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR
Sbjct  4986  EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  5165

Query  541   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
             QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  5166  QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  5345

Query  601   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
             WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  5346  WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  5525

Query  661   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
             LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  5526  LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  5705

Query  721   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
             WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  5706  WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  5885

Query  781   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
             SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  5886  SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  6065

Query  841   VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
             VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  6066  VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  6245

Query  901   TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
             TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  6246  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  6425

Query  949   -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
              PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  6426  APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  6605

Query  1008  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
             QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  6606  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  6785

Query  1068  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
             SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  6786  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  6965

Query  1128  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
             QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM
Sbjct  6966  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  7145

Query  1188  EQLNNSFPSSRGHNV  1202
             EQLNNSFPSSRG N 
Sbjct  7146  EQLNNSFPSSRGRNT  7190


 Score = 71.6 bits (174),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/33 (100%), Positives = 33/33 (100%), Gaps = 0/33 (0%)
 Frame = +2

Query  1198  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  7208  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  7306


 Score = 60.5 bits (145),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 81/382 (21%), Positives = 175/382 (45%), Gaps = 54/382 (14%)
 Frame = +3

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             +PS+ + E+          T ++  L  ++Q++ +  +   D ED+     KQ+ +++++
Sbjct  2151  VPSTYLTEI----------THVSQALLEVEQLLNAPDLCAKDFEDL----FKQEESLKNI  2288

Query  61    E---QRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNE  117
             +   Q+     ++I + +    +++    R  + + + ++  QW++V +  ++R+ + + 
Sbjct  2289  KDSLQQSSGRIDIIHSKKTAALQSATPVERVKLQEALSQLDFQWEKVNKMYKDRQGRFDR  2468

Query  118   M----------LKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLA  167
                        +K   QWL    EAEQ L + +   E+W+   Y            K+L 
Sbjct  2469  SVEKWRRFHYDIKIFNQWLT---EAEQFLRKTQIP-ENWEHAKYK--------WYLKELQ  2612

Query  168   KDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEET  227
               + Q QT V   N    ++++  S  D   +     ++N  W+ + K++S+R+  LEE 
Sbjct  2613  DGIGQRQTVVRTLNATGEEIIQQSSKTDASILQEKLGSLNLRWQEVCKQLSDRKKRLEEQ  2792

Query  228   HRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEA  287
               +L +F  DL +F+ WL EA+  A++  +  ++++L E  + VK L+++    QG    
Sbjct  2793  KNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVEELPLRQG----  2960

Query  288   HTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ  346
                +   L+E    +L S   S ++   L+ +L   N +W ++ +     +  +EA    
Sbjct  2961  ---ILKQLNETGGPVLVSAPISPEEQDKLENKLKQTNLQWIKVSRALPEKQGEIEAQIKD  3131

Query  347   WKRLHLSLQE-------LLVWL  361
               +L   L++       LL+WL
Sbjct  3132  LGQLEKKLEDLEEQLNHLLLWL  3197


 Score = 44.3 bits (103),  Expect = 0.47, Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 133/281 (47%), Gaps = 42/281 (14%)
 Frame = +3

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             LT+WL+  D  +  +  + G   +++  +   KAT +++E+++  L+ +    + LK   
Sbjct  912   LTEWLAATDMELTKRSAVEGMPSNLDSEVAWGKATQKEIEKQKVHLKSITEVGEALKTVL  1091

Query  82    SNQEARTIITDRIERIQNQWD--------------EVQEHLQNRRQQLNEMLKDSTQWLE  127
               +E  T++ D++  + + W               E Q+H++   Q ++ +    T+W+ 
Sbjct  1092  GKKE--TLVEDKLSLLNSNWIAVTSRAEEWLNLLLEYQKHMETFDQNVDHI----TKWI-  1250

Query  128   AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
                +A+ +L       ES K+ P      Q+K    K+L  +L   +  VD   D A  L
Sbjct  1251  --IQADTLLD------ESEKKKP------QQKEDVLKRLKAELNDIRPKVDSTRDQAANL  1388

Query  188   LRDYSADDTRK-VHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
             + +   D  RK V      +N  + +I  R+   +A++    + L+QF  D++K L  L 
Sbjct  1389  MAN-RGDHCRKLVEPQISELNHRFAAISHRIKTGKASI--PLKELEQFNSDIQKLLEPL-  1556

Query  247   EAETTANV-LQDATRKERLLEDSKG-VKELMKQWQDLQGEI  285
             EAE    V L++    + + ED++G VKEL+++  +LQ  I
Sbjct  1557  EAEIQQGVNLKEEDFNKDMNEDNEGTVKELLQRGDNLQQRI  1679


>ref|NM_004011.3| Homo sapiens dystrophin (DMD), transcript variant Dp260-1, mRNA
Length=9771

 Score = 2484 bits (6439),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1200/1215 (98%), Positives = 1200/1215 (98%), Gaps = 13/1215 (1%)
 Frame = +1

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  3403  MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  3582

Query  61    EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
             EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  3583  EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  3762

Query  121   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
             DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA
Sbjct  3763  DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  3942

Query  181   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
             NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK
Sbjct  3943  NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  4122

Query  241   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
             FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ
Sbjct  4123  FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  4302

Query  301   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
             KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  4303  KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  4482

Query  361   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
             LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  4483  LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  4662

Query  421   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
             LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ
Sbjct  4663  LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  4842

Query  481   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
             EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR
Sbjct  4843  EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  5022

Query  541   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
             QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  5023  QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  5202

Query  601   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
             WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  5203  WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  5382

Query  661   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
             LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  5383  LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  5562

Query  721   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
             WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  5563  WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  5742

Query  781   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
             SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  5743  SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  5922

Query  841   VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
             VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  5923  VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  6102

Query  901   TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
             TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  6103  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  6282

Query  949   -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
              PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  6283  APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  6462

Query  1008  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
             QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  6463  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  6642

Query  1068  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
             SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  6643  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  6822

Query  1128  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
             QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM
Sbjct  6823  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  7002

Query  1188  EQLNNSFPSSRGHNV  1202
             EQLNNSFPSSRG N 
Sbjct  7003  EQLNNSFPSSRGRNT  7047


 Score = 71.6 bits (174),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/33 (100%), Positives = 33/33 (100%), Gaps = 0/33 (0%)
 Frame = +3

Query  1198  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  7065  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  7163


 Score = 60.5 bits (145),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 81/382 (21%), Positives = 175/382 (45%), Gaps = 54/382 (14%)
 Frame = +1

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             +PS+ + E+          T ++  L  ++Q++ +  +   D ED+     KQ+ +++++
Sbjct  2008  VPSTYLTEI----------THVSQALLEVEQLLNAPDLCAKDFEDL----FKQEESLKNI  2145

Query  61    E---QRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNE  117
             +   Q+     ++I + +    +++    R  + + + ++  QW++V +  ++R+ + + 
Sbjct  2146  KDSLQQSSGRIDIIHSKKTAALQSATPVERVKLQEALSQLDFQWEKVNKMYKDRQGRFDR  2325

Query  118   M----------LKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLA  167
                        +K   QWL    EAEQ L + +   E+W+   Y            K+L 
Sbjct  2326  SVEKWRRFHYDIKIFNQWLT---EAEQFLRKTQIP-ENWEHAKYK--------WYLKELQ  2469

Query  168   KDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEET  227
               + Q QT V   N    ++++  S  D   +     ++N  W+ + K++S+R+  LEE 
Sbjct  2470  DGIGQRQTVVRTLNATGEEIIQQSSKTDASILQEKLGSLNLRWQEVCKQLSDRKKRLEEQ  2649

Query  228   HRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEA  287
               +L +F  DL +F+ WL EA+  A++  +  ++++L E  + VK L+++    QG    
Sbjct  2650  KNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVEELPLRQG----  2817

Query  288   HTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ  346
                +   L+E    +L S   S ++   L+ +L   N +W ++ +     +  +EA    
Sbjct  2818  ---ILKQLNETGGPVLVSAPISPEEQDKLENKLKQTNLQWIKVSRALPEKQGEIEAQIKD  2988

Query  347   WKRLHLSLQE-------LLVWL  361
               +L   L++       LL+WL
Sbjct  2989  LGQLEKKLEDLEEQLNHLLLWL  3054


 Score = 44.3 bits (103),  Expect = 0.47, Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 133/281 (47%), Gaps = 42/281 (14%)
 Frame = +1

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             LT+WL+  D  +  +  + G   +++  +   KAT +++E+++  L+ +    + LK   
Sbjct  769   LTEWLAATDMELTKRSAVEGMPSNLDSEVAWGKATQKEIEKQKVHLKSITEVGEALKTVL  948

Query  82    SNQEARTIITDRIERIQNQWD--------------EVQEHLQNRRQQLNEMLKDSTQWLE  127
               +E  T++ D++  + + W               E Q+H++   Q ++ +    T+W+ 
Sbjct  949   GKKE--TLVEDKLSLLNSNWIAVTSRAEEWLNLLLEYQKHMETFDQNVDHI----TKWI-  1107

Query  128   AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
                +A+ +L       ES K+ P      Q+K    K+L  +L   +  VD   D A  L
Sbjct  1108  --IQADTLLD------ESEKKKP------QQKEDVLKRLKAELNDIRPKVDSTRDQAANL  1245

Query  188   LRDYSADDTRK-VHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
             + +   D  RK V      +N  + +I  R+   +A++    + L+QF  D++K L  L 
Sbjct  1246  MAN-RGDHCRKLVEPQISELNHRFAAISHRIKTGKASI--PLKELEQFNSDIQKLLEPL-  1413

Query  247   EAETTANV-LQDATRKERLLEDSKG-VKELMKQWQDLQGEI  285
             EAE    V L++    + + ED++G VKEL+++  +LQ  I
Sbjct  1414  EAEIQQGVNLKEEDFNKDMNEDNEGTVKELLQRGDNLQQRI  1536


>ref|NM_004013.2| Homo sapiens dystrophin (DMD), transcript variant Dp140, mRNA
Length=7410

 Score = 2469 bits (6400),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1200/1215 (98%), Positives = 1200/1215 (98%), Gaps = 13/1215 (1%)
 Frame = +1

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  1042  MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  1221

Query  61    EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
             EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  1222  EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  1401

Query  121   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
             DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA
Sbjct  1402  DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  1581

Query  181   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
             NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK
Sbjct  1582  NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  1761

Query  241   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
             FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ
Sbjct  1762  FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  1941

Query  301   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
             KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  1942  KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  2121

Query  361   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
             LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  2122  LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  2301

Query  421   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
             LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ
Sbjct  2302  LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  2481

Query  481   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
             EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR
Sbjct  2482  EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  2661

Query  541   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
             QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  2662  QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  2841

Query  601   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
             WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  2842  WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  3021

Query  661   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
             LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  3022  LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  3201

Query  721   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
             WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  3202  WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  3381

Query  781   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
             SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  3382  SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  3561

Query  841   VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
             VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  3562  VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  3741

Query  901   TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
             TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  3742  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  3921

Query  949   -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
              PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  3922  APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  4101

Query  1008  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
             QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  4102  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  4281

Query  1068  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
             SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  4282  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  4461

Query  1128  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
             QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM
Sbjct  4462  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  4641

Query  1188  EQLNNSFPSSRGHNV  1202
             EQLNNSFPSSRG N 
Sbjct  4642  EQLNNSFPSSRGRNT  4686


 Score = 71.6 bits (174),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/33 (100%), Positives = 33/33 (100%), Gaps = 0/33 (0%)
 Frame = +3

Query  1198  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  4704  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  4802


 Score = 55.8 bits (133),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
 Frame = +1

Query  164  KQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAA  223
            K+L   + Q QT V   N    ++++  S  D   +     ++N  W+ + K++S+R+  
Sbjct  97   KELQDGIGQRQTVVRTLNATGEEIIQQSSKTDASILQEKLGSLNLRWQEVCKQLSDRKKR  276

Query  224  LEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQG  283
            LEE   +L +F  DL +F+ WL EA+  A++  +  ++++L E  + VK L+++    QG
Sbjct  277  LEEQKNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVEELPLRQG  456

Query  284  EIEAHTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEA  342
                   +   L+E    +L S   S ++   L+ +L   N +W ++ +     +  +EA
Sbjct  457  -------ILKQLNETGGPVLVSAPISPEEQDKLENKLKQTNLQWIKVSRALPEKQGEIEA  615

Query  343  SSDQWKRLHLSLQE-------LLVWL  361
                  +L   L++       LL+WL
Sbjct  616  QIKDLGQLEKKLEDLEEQLNHLLLWL  693


>gb|BC127103.1| Homo sapiens dystrophin, mRNA (cDNA clone IMAGE:40124458), complete 
cds
Length=4767

 Score = 2467 bits (6393),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1200/1215 (98%), Positives = 1200/1215 (98%), Gaps = 13/1215 (1%)
 Frame = +2

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  566   MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  745

Query  61    EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
             EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  746   EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  925

Query  121   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
             DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA
Sbjct  926   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  1105

Query  181   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
             NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK
Sbjct  1106  NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  1285

Query  241   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
             FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ
Sbjct  1286  FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  1465

Query  301   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
             KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  1466  KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  1645

Query  361   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
             LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  1646  LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  1825

Query  421   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
             LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ
Sbjct  1826  LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  2005

Query  481   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
             EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR
Sbjct  2006  EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  2185

Query  541   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
             QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  2186  QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  2365

Query  601   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
             WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  2366  WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  2545

Query  661   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
             LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  2546  LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  2725

Query  721   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
             WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  2726  WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  2905

Query  781   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
             SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  2906  SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  3085

Query  841   VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
             VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  3086  VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  3265

Query  901   TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
             TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  3266  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  3445

Query  949   -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
              PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  3446  APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  3625

Query  1008  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
             QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  3626  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  3805

Query  1068  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
             SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  3806  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  3985

Query  1128  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
             QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM
Sbjct  3986  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  4165

Query  1188  EQLNNSFPSSRGHNV  1202
             EQLNNSFPSSRG N 
Sbjct  4166  EQLNNSFPSSRGRNT  4210


 Score = 69.3 bits (168),  Expect = 1e-08, Method: Composition-based stats.
 Identities = 33/35 (94%), Positives = 34/35 (97%), Gaps = 0/35 (0%)
 Frame = +1

Query  1196  SSRGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             + RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  4222  NERGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  4326


>ref|XR_022800.1| PREDICTED: Pan troglodytes dystrophin (DMD), mRNA
Length=9503

 Score = 2450 bits (6349),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1195/1224 (97%), Positives = 1197/1224 (97%), Gaps = 22/1224 (1%)
 Frame = +1

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             MPSSLMLEVPALADFNRAWTELTDWLSLLD+VIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  3166  MPSSLMLEVPALADFNRAWTELTDWLSLLDRVIKSQRVMVGDLEDINEMIIKQKATMQDL  3345

Query  61    EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
             EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  3346  EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  3525

Query  121   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
             DSTQWLEAKEEAEQVLGQARAKLESWKEGPYT+DAIQKKITETKQLAKDLRQWQ NVDVA
Sbjct  3526  DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTIDAIQKKITETKQLAKDLRQWQINVDVA  3705

Query  181   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
             NDLALKLLRDYSADDTRKVHMITENINASW SIHKRVSEREAALEETHRLLQQFPLDLEK
Sbjct  3706  NDLALKLLRDYSADDTRKVHMITENINASWGSIHKRVSEREAALEETHRLLQQFPLDLEK  3885

Query  241   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
             FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTD YHNLDENSQ
Sbjct  3886  FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDAYHNLDENSQ  4065

Query  301   KI---------LRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
             KI         LRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH
Sbjct  4066  KICEIPGSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  4245

Query  352   LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
             LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI
Sbjct  4246  LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  4425

Query  412   FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
             FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE
Sbjct  4426  FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  4605

Query  472   TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKEN  531
             TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKEN
Sbjct  4606  TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKEN  4785

Query  532   VSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQH  591
             VSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQH
Sbjct  4786  VSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQH  4965

Query  592   FLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMK  651
             FLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMK
Sbjct  4966  FLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMK  5145

Query  652   LRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNV  711
             LRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNV
Sbjct  5146  LRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNV  5325

Query  712   PLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQ  771
             PLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQ
Sbjct  5326  PLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQ  5505

Query  772   RRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQS  831
             RRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQS
Sbjct  5506  RRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQS  5685

Query  832   MVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHK  891
             MVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHK
Sbjct  5686  MVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHK  5865

Query  892   MHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET---  948
             MHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET   
Sbjct  5866  MHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVT  6045

Query  949   ----------PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLL  998
                       PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLL
Sbjct  6046  LINFWPVDSAPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLL  6225

Query  999   IQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQH  1058
             IQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQH
Sbjct  6226  IQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQH  6405

Query  1059  EHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLH  1118
             EHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLH
Sbjct  6406  EHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLH  6585

Query  1119  RLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQD  1178
             RLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQD
Sbjct  6586  RLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQD  6765

Query  1179  TSTGLEEVMEQLNNSFPSSRGHNV  1202
             TSTGLEEVMEQLNNSFPSSRG N 
Sbjct  6766  TSTGLEEVMEQLNNSFPSSRGRNT  6837


 Score = 71.6 bits (174),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/33 (100%), Positives = 33/33 (100%), Gaps = 0/33 (0%)
 Frame = +3

Query  1198  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  6855  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  6953


 Score = 45.1 bits (105),  Expect = 0.23, Method: Compositional matrix adjust.
 Identities = 41/185 (22%), Positives = 83/185 (44%), Gaps = 19/185 (10%)
 Frame = +1

Query  164   KQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAA  223
             K +   L+Q    +D+ +      L+  +  +  K+      ++  W  ++K   +R+  
Sbjct  1900  KNIKDSLQQSSGRIDIIHSKKTAALQSATPVERVKLQEALSQLDFQWEKVNKMYKDRQGR  2079

Query  224   LEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQW--QDL  281
              + +    ++F  D++ F  WLTEAE          RK ++ E+ +  K    +W  ++L
Sbjct  2080  FDRSVEKWRRFHYDIKIFNQWLTEAE-------QFLRKTQIPENWEHAK---YKWYLKEL  2229

Query  282   QGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSEL------RKKSLN  335
             Q  I     V   L+   ++I++      DA +LQ +L ++N +W E+      RKK ++
Sbjct  2230  QDGIGQRQTVVRALNATGEEIIQQ-SSKTDASILQEKLGSLNLRWQEVCKQLSDRKKRVD  2406

Query  336   IRSHL  340
                H+
Sbjct  2407  AHKHI  2421


>ref|XM_850502.1| PREDICTED: Canis familiaris hypothetical protein LOC606758 (LOC606758), 
mRNA
Length=13507

 Score = 2449 bits (6348),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1175/1215 (96%), Positives = 1192/1215 (98%), Gaps = 13/1215 (1%)
 Frame = +3

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
              MPSSL+LEVPALADFNRAWTELTDWLSLLD+VIKSQRVMVGDLEDINEMIIKQKAT+QDL
Sbjct  7275   MPSSLLLEVPALADFNRAWTELTDWLSLLDRVIKSQRVMVGDLEDINEMIIKQKATLQDL  7454

Query  61     EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
              EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQ+QWDEVQEHLQNRRQQLNEMLK
Sbjct  7455   EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQSQWDEVQEHLQNRRQQLNEMLK  7634

Query  121    DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              DSTQWLEAKEEAEQVLGQARAKLESWKE PYTVDAIQKKITETKQLAKDLRQWQ NVDVA
Sbjct  7635   DSTQWLEAKEEAEQVLGQARAKLESWKEAPYTVDAIQKKITETKQLAKDLRQWQINVDVA  7814

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              NDLALKLLRDYSADDTRKVHMITENINASW SIHKR+SEREAALEETHRLLQQFPLDLEK
Sbjct  7815   NDLALKLLRDYSADDTRKVHMITENINASWASIHKRLSEREAALEETHRLLQQFPLDLEK  7994

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              FLAWLTEAETTANVLQDAT KERLLEDSKGV+ELMKQWQDLQGEIEAHTD+YHNLDEN Q
Sbjct  7995   FLAWLTEAETTANVLQDATHKERLLEDSKGVRELMKQWQDLQGEIEAHTDIYHNLDENGQ  8174

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
              K+LRSLEGSDDA LLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  8175   KVLRSLEGSDDAALLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  8354

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  8355   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  8534

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNT+WEKLN+HSADWQRKIDE LERLQELQ
Sbjct  8535   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTQWEKLNVHSADWQRKIDEALERLQELQ  8714

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
              EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEI PLKENVS+VNDLAR
Sbjct  8715   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEITPLKENVSYVNDLAR  8894

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QLTTLGIQLSPYNL+TLEDLNTRWKLLQVA+EDR+RQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  8895   QLTTLGIQLSPYNLNTLEDLNTRWKLLQVAIEDRIRQLHEAHRDFGPASQHFLSTSVQGP  9074

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  9075   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  9254

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLLSLSAACDALDQHNLKQNDQPMDILQ+INCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  9255   LDLLSLSAACDALDQHNLKQNDQPMDILQVINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  9434

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  9435   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  9614

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  9615   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  9794

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  9795   VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  9974

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
              TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  9975   TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  10154

Query  949    -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
               PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  10155  APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  10334

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
              QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  10335  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  10514

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  10515  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  10694

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTS+SMGEEDLLSPPQDTSTGLEEVM
Sbjct  10695  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSESMGEEDLLSPPQDTSTGLEEVM  10874

Query  1188   EQLNNSFPSSRGHNV  1202
              EQLN+SFPSSRG N 
Sbjct  10875  EQLNHSFPSSRGRNT  10919


 Score = 70.1 bits (170),  Expect = 8e-09, Method: Compositional matrix adjust.
 Identities = 32/33 (96%), Positives = 33/33 (100%), Gaps = 0/33 (0%)
 Frame = +2

Query  1198   RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
              RGHNVGSLFH+ADDLGRAMESLVSVMTDEEGAE
Sbjct  10937  RGHNVGSLFHLADDLGRAMESLVSVMTDEEGAE  11035


 Score = 69.7 bits (169),  Expect = 9e-09, Method: Compositional matrix adjust.
 Identities = 83/375 (22%), Positives = 168/375 (44%), Gaps = 47/375 (12%)
 Frame = +3

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             +PS+ + E+          T ++  LS +++++ +  +   D ED+     KQ+ +++++
Sbjct  5901  VPSTYLTEI----------THVSQALSEVEELLNAPDLCAQDFEDL----FKQEESLKNI  6038

Query  61    EQRRPQLEELITAAQNLKNK---TSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNE  117
             +    Q+   I    N K     ++    R  + + + R+  QW+ V    ++R+ + + 
Sbjct  6039  KDSLQQISGRIDIIHNKKTAALHSATPAERAKLQEALSRLDFQWERVNNMYKDRQGRFDR  6218

Query  118   M----------LKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLA  167
                        +K   QWL    EAEQ L + +   E+W+   Y            K+L 
Sbjct  6219  SVEKWRRFHYDMKILNQWLT---EAEQFLKKTQIP-ENWEHAKYK--------WYLKELQ  6362

Query  168   KDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEET  227
               + Q Q+ V V N    ++++  S  D   +     ++N  W+ + K+++ER+  LEE 
Sbjct  6363  DGIGQRQSVVRVLNATGEEIIQQSSKTDASILQEKLGSLNLRWQEVCKQLAERKKRLEEQ  6542

Query  228   HRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEA  287
               +L +F  D+ +F+ WL EA+  AN+  +   +++L       KE ++Q + L  E+  
Sbjct  6543  KNILSEFQRDVNEFVLWLEEADNVANIPLEPGNEQQL-------KEKLEQVKLLAEELPL  6701

Query  288   HTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ  346
                +   L+E    +L S   S ++   L+ +L   N +W ++ +     +  +EA    
Sbjct  6702  RQGILKQLNETGGTVLVSAPLSPEEQDKLENKLKQTNLQWIKVSRNLPEKQEEIEAHVKD  6881

Query  347   WKRLHLSLQELLVWL  361
               +L   L  LL+WL
Sbjct  6882  LGQLEEQLNHLLLWL  6926


 Score = 45.1 bits (105),  Expect = 0.28, Method: Compositional matrix adjust.
 Identities = 78/346 (22%), Positives = 145/346 (41%), Gaps = 33/346 (9%)
 Frame = +3

Query  12    LADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELI  71
             L  +  A  E+  WL   +  +++Q  +  D+E++ E     +  M DL   + ++  ++
Sbjct  933   LDSYQTALEEVLSWLLSAEDALQAQGEISNDVEEVKEQFHTHEGYMMDLTSHQGRVGNVL  1112

Query  72    TAAQNL--------KNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQL-NEMLKDS  122
                  L          +T  QE   ++  R E ++    E Q +L      L N+ LK+ 
Sbjct  1113  QLGSQLIGTGKLSEDEETEVQEQMNLLNSRWECLRVASMEKQSNLHKVLMDLQNQQLKEL  1292

Query  123   TQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVAND  182
               WL   EE  +       K+E    GP  ++ +++++ + K L +DL Q Q  V+    
Sbjct  1293  NDWLTKTEERTR-------KMEKEPLGP-DIEDLKRQVQQHKVLQEDLEQEQVRVNSLTH  1448

Query  183   LALKLLRDYSADD--TRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
             + + +  D S+ D  T  +    + +   W +I +   +R   L++     Q+F  +   
Sbjct  1449  MVVVV--DESSGDHATAALEEQLKVLGDRWANICRWTEDRWVLLQDILLKWQRFTEEQCL  1622

Query  241   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
             F AWL+E E   N +     K     D   V   +++   L+ ++E        L   +Q
Sbjct  1623  FSAWLSEKEDAVNKIHTTGFK-----DQSEVLSNLQKLAVLKTDLEKKKQTMDKLCSLNQ  1787

Query  301   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ  346
              +L +L+ +  A  ++  LDN   +W  L +K       LE SS Q
Sbjct  1788  DLLSALKNTVVAHKMEAWLDNFAQRWDNLVQK-------LEKSSAQ  1904


 Score = 43.5 bits (101),  Expect = 0.83, Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 134/283 (47%), Gaps = 46/283 (16%)
 Frame = +3

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             LT+WL+  D  +  +  + G   +++  +   KAT +++E+++  L+ +    + LK   
Sbjct  4662  LTEWLAATDMELTKRSAVEGMPSNLDSEVAWGKATQKEIEKQKVHLKSVTEVGEALKTVL  4841

Query  82    SNQEARTIITDRIERIQNQWD--------------EVQEHLQNRRQQLNEMLKDSTQWLE  127
               +E   ++ D++  + + W               E Q+H++N  Q ++ +    T W  
Sbjct  4842  GKKE--MLVEDKLSLLNSNWIAVTSRAEEWLNLLLEYQKHMENFDQNVDYI----TNW--  4997

Query  128   AKEEAEQVLGQARAKL-ESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALK  186
                     + QA A L ES K+ P      Q+K    K+L  ++   +  VD   D A  
Sbjct  4998  --------IIQADALLDESEKKKP------QQKEDILKRLKAEMNDIRPKVDSTRDQAAN  5135

Query  187   LLRDYSADDTRKV--HMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAW  244
             L+ +   D  RKV    I+E +N  + +I  R+   +A++    + L+QF  D++K L  
Sbjct  5136  LMAN-RGDHCRKVVEPKISE-LNHRFAAISHRIKTGKASI--PLKELEQFNSDIQKLLEP  5303

Query  245   LTEAETTANV-LQDATRKERLLEDSKG-VKELMKQWQDLQGEI  285
             L EAE    V L++    + + ED++G VKEL+++  +LQ  I
Sbjct  5304  L-EAEIQQGVNLKEEDFNKDMSEDNEGTVKELLQRGDNLQQRI  5429


 Score = 41.2 bits (95),  Expect = 3.4, Method: Compositional matrix adjust.
 Identities = 66/332 (19%), Positives = 141/332 (42%), Gaps = 33/332 (9%)
 Frame = +3

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             L  W++ +D  +K +   +GD E +   + + +  + D++  +P L  +   AQ +KN+ 
Sbjct  3093  LKKWITEVDVFLKEEWPALGDSEILKRQLKQCRLLVNDIQTIQPSLNSVNEGAQKMKNEA  3272

Query  82    SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
               + A  + T+ +  +  QWD +   +  R++ L   L  +    +   E  + + QA  
Sbjct  3273  EPEFAGRLETE-LRELNTQWDYMCRQVYARKEALKGGLDKTVSLQKDLSEMHEWMTQAE-  3446

Query  142   KLESWKEGPY---TVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRK  198
               E + E  +   T D +Q  + E K+  ++ +Q +  V +  +    ++          
Sbjct  3447  --EEYLERDFEYKTPDELQTAVEEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPAAQEA  3620

Query  199   VHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAE----TTANV  254
             +    + +  +++ +  R++ +   LEE      +    LEK   WL+E E    TT N+
Sbjct  3621  LKKELDTLTTNYQWLCTRLNGKCKTLEEVWACWHELLSYLEKANKWLSEVEVKLKTTENI  3800

Query  255   LQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAV-  313
                          S G +E+ +    L+  ++      H+ D  +Q  + +   +D  V 
Sbjct  3801  -------------SGGAEEIAEVLDSLENLMQ------HSEDNPNQIRILAQTLTDGGVM  3923

Query  314   --LLQRRLDNMNFKWSELRKKSLNIRSHLEAS  343
               L+   L+  N +W EL ++++  +  LE S
Sbjct  3924  DELINEELETFNSRWRELHEEAVRRQKLLEQS  4019


 Score = 40.0 bits (92),  Expect = 9.0, Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 77/150 (51%), Gaps = 4/150 (2%)
 Frame = +3

Query  420   GLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQEL  479
             GL  L    +E+  +    +++R  + + EE+   W+KL+    +  +K++E + +L+++
Sbjct  2895  GLNYLSTTVKEMSKKAPLSDISRKYQSEFEEIEGRWKKLSSQLVEHCQKLEEQMAKLRKI  3074

Query  480   QEATDELDLKLRQAEV-IKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDL  538
             Q     L   + + +V +K  W  +GD  I  L+  L++ + L  +I  ++ +++ VN+ 
Sbjct  3075  QNHIKTLKKWITEVDVFLKEEWPALGDSEI--LKRQLKQCRLLVNDIQTIQPSLNSVNEG  3248

Query  539   ARQLTTLGIQLSPYNLST-LEDLNTRWKLL  567
             A+++           L T L +LNT+W  +
Sbjct  3249  AQKMKNEAEPEFAGRLETELRELNTQWDYM  3338


>emb|AJ865385.1| Sus scrofa mRNA for dystrophin variant Dp427 (dmd gene)
Length=11470

 Score = 2447 bits (6342),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1175/1215 (96%), Positives = 1190/1215 (97%), Gaps = 13/1215 (1%)
 Frame = +2

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
              MPSSL+LEVPALADFNRAWTELTDWLSLLD+VIKSQRVMVGDLEDINEMIIKQKAT+QDL
Sbjct  7541   MPSSLLLEVPALADFNRAWTELTDWLSLLDRVIKSQRVMVGDLEDINEMIIKQKATLQDL  7720

Query  61     EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
              EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQ+QWDEVQEHLQNRRQQLNEMLK
Sbjct  7721   EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQSQWDEVQEHLQNRRQQLNEMLK  7900

Query  121    DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              DSTQWLEAKEEAEQVLGQARAKLESWKEGPYT+DAIQ+KITETKQLAKDLRQWQ NVDVA
Sbjct  7901   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTMDAIQRKITETKQLAKDLRQWQINVDVA  8080

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              NDLALKLLRDYSADDTRKVHMITENINASW +IHKR+SERE  LEETHRLLQQFPLDLEK
Sbjct  8081   NDLALKLLRDYSADDTRKVHMITENINASWANIHKRLSERETVLEETHRLLQQFPLDLEK  8260

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              FLAWLTEAETTANVLQDAT KERLLEDSKGV+ELMKQWQDLQGEIEAHTD+YHNLDEN Q
Sbjct  8261   FLAWLTEAETTANVLQDATHKERLLEDSKGVRELMKQWQDLQGEIEAHTDIYHNLDENGQ  8440

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
              KILRSLEGSDDA+LLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  8441   KILRSLEGSDDAILLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  8620

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              LQLKDDELSRQAPIGGD PAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  8621   LQLKDDELSRQAPIGGDCPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  8800

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE LERLQELQ
Sbjct  8801   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDEALERLQELQ  8980

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
              EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGE APLKENVSHVNDLAR
Sbjct  8981   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEKAPLKENVSHVNDLAR  9160

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDR+RQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  9161   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRIRQLHEAHRDFGPASQHFLSTSVQGP  9340

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  9341   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  9520

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTT+YDRLEQEHNNLVNVPLCVDMCLN
Sbjct  9521   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTVYDRLEQEHNNLVNVPLCVDMCLN  9700

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTGRIRVLSFKTGI+SLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  9701   WLLNVYDTGRTGRIRVLSFKTGIVSLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  9880

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  9881   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  10060

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  10061  VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  10240

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
              TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  10241  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  10420

Query  949    -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
               PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  10421  APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  10600

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
              QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  10601  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  10780

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQ LEDHNKQLESQLHRLRQLLEQP
Sbjct  10781  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQTLEDHNKQLESQLHRLRQLLEQP  10960

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTS+SMGEEDLLSPPQDTSTGLEEVM
Sbjct  10961  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSESMGEEDLLSPPQDTSTGLEEVM  11140

Query  1188   EQLNNSFPSSRGHNV  1202
              EQLNNSFPSSRG N 
Sbjct  11141  EQLNNSFPSSRGRNT  11185


 Score = 71.6 bits (174),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/35 (94%), Positives = 34/35 (97%), Gaps = 0/35 (0%)
 Frame = +1

Query  1196   SSRGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
              S RGHNVGSLFH+ADDLGRAMESLVSVMTDEEGAE
Sbjct  11197  SERGHNVGSLFHLADDLGRAMESLVSVMTDEEGAE  11301


 Score = 66.2 bits (160),  Expect = 9e-08, Method: Compositional matrix adjust.
 Identities = 82/375 (21%), Positives = 169/375 (45%), Gaps = 47/375 (12%)
 Frame = +2

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             +PS+ + E+          T ++  LS ++Q++ +  +   D ED+     KQ+ +++++
Sbjct  6167  VPSAYLTEI----------THVSQALSEVEQLLNAPDLCAKDFEDL----FKQEESLKNI  6304

Query  61    EQRRPQLEELITAAQNLKN---KTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNE  117
             +    Q+   +    N K    +++    RT + + + ++  QW+ V +  ++R+ + + 
Sbjct  6305  KDSLQQISGRVDIIHNKKTAGLQSATPVERTRLQEALSQLDFQWERVNKMYKDRQGKFDR  6484

Query  118   M----------LKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLA  167
                        +K   QWL    EAE  L + +   E+W+   Y            K+L 
Sbjct  6485  SVEKWRRFHYDMKIFNQWLT---EAEHFLKKTQIP-ENWEHAKYK--------WYLKELQ  6628

Query  168   KDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEET  227
               + Q QT V V N    ++++  S  D   +     ++N  W+ + K+++ER+  LEE 
Sbjct  6629  DGIGQRQTIVRVLNATGEEVIQQSSKTDASILQEKLGSLNLRWQEVCKQLAERKKRLEEQ  6808

Query  228   HRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEA  287
               +L +F  DL +F+ WL EA+   +V  +   +++L E  + +K L ++    QG ++ 
Sbjct  6809  KNILSEFQRDLNEFVLWLEEADNITSVALEPGNEQQLKEKLEEIKLLAEELPLRQGTLK-  6985

Query  288   HTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ  346
                    L+E    +L S   S ++   ++ +L   N +W ++ +     +  +EA    
Sbjct  6986  ------QLNETGGTVLVSAPISPEEQDKIENKLKQTNLQWIKVSRILPEKQGEIEAHIKD  7147

Query  347   WKRLHLSLQELLVWL  361
               +    L  LLVWL
Sbjct  7148  LGQFEEQLNHLLVWL  7192


 Score = 47.4 bits (111),  Expect = 0.048, Method: Compositional matrix adjust.
 Identities = 42/205 (20%), Positives = 92/205 (44%), Gaps = 13/205 (6%)
 Frame = +2

Query  164   KQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAA  223
             K +   L+Q    VD+ ++     L+  +  +  ++      ++  W  ++K   +R+  
Sbjct  6296  KNIKDSLQQISGRVDIIHNKKTAGLQSATPVERTRLQEALSQLDFQWERVNKMYKDRQGK  6475

Query  224   LEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQW--QDL  281
              + +    ++F  D++ F  WLTEAE          +K ++ E+ +  K    +W  ++L
Sbjct  6476  FDRSVEKWRRFHYDMKIFNQWLTEAE-------HFLKKTQIPENWEHAK---YKWYLKEL  6625

Query  282   QGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLE  341
             Q  I     +   L+   +++++      DA +LQ +L ++N +W E+ K+    +  LE
Sbjct  6626  QDGIGQRQTIVRVLNATGEEVIQQ-SSKTDASILQEKLGSLNLRWQEVCKQLAERKKRLE  6802

Query  342   ASSDQWKRLHLSLQELLVWLQLKDD  366
                +        L E ++WL+  D+
Sbjct  6803  EQKNILSEFQRDLNEFVLWLEEADN  6877


 Score = 45.8 bits (107),  Expect = 0.16, Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 138/282 (48%), Gaps = 44/282 (15%)
 Frame = +2

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             LT+WL+  D  +  +  + G   +++  ++  KAT +++E+++  L+ +    + LK   
Sbjct  4928  LTEWLAATDTELTKRSAVEGMPSNLDSEVVWGKATQKEIEKQKFHLKSISEIGEALKMVL  5107

Query  82    SNQEARTIITDRIERIQNQWD--------------EVQEHLQNRRQQLNEMLKDSTQWLE  127
               +E  T++ D++  + + W               E Q+H++N  Q ++ +    T+W+ 
Sbjct  5108  GKKE--TLVEDKLSLLNSNWIAVTSRAEEWLNLLLEYQKHMENFDQNVDHI----TKWI-  5266

Query  128   AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
                +A+ +L       ES K+ P      Q+K    K+L  ++   +  VD   D A  L
Sbjct  5267  --IQADTLLD------ESEKKKP------QQKEDVLKRLKAEMNDMRPKVDSTRDQAANL  5404

Query  188   LRDYSADDTRKV--HMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWL  245
             + +   D  RKV    I+E +N  + +I  R+   +A++    + L+QF  D++K L  L
Sbjct  5405  MAN-RGDHCRKVIEPKISE-LNHRFAAISHRIKTGKASI--PLKELEQFNSDIQKLLEPL  5572

Query  246   TEAETTANV-LQDATRKERLLEDSKG-VKELMKQWQDLQGEI  285
              EAE    V L++    + + ED++G VKEL+++  +LQ  I
Sbjct  5573  -EAEIQQGVNLKEEDFNKDMSEDNEGTVKELLQRGDNLQQRI  5695


 Score = 44.7 bits (104),  Expect = 0.36, Method: Compositional matrix adjust.
 Identities = 81/355 (22%), Positives = 147/355 (41%), Gaps = 33/355 (9%)
 Frame = +2

Query  3     SSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQ  62
             SSL+     L  +  A  E+  WL   +  +++Q  +  D+E++ E     +  M DL  
Sbjct  1175  SSLLETEVNLDSYQTALEEVLSWLLSAEDTLQAQGEISNDVEEVKEQFHTHEGYMMDLTS  1354

Query  63    RRPQLEELITAAQNLKNK--------TSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQ  114
              + ++  ++     L  K        T  QE   ++  R E ++    E Q +L      
Sbjct  1355  HQGRIGSVLQLGSQLIGKGKLSEDEETEVQEQMNLLNSRWECLRVASVEKQSNLHKVLMD  1534

Query  115   L-NEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQW  173
             L N+ LK+   WL   EE  +       K+E    GP  ++ ++ +I + K L +DL Q 
Sbjct  1535  LQNQQLKELNDWLTKTEEKTR-------KMEKEPLGP-DLEDLKHQIQQHKVLQEDLEQE  1690

Query  174   QTNVDVANDLALKLLRDYSADD--TRKVHMITENINASWRSIHKRVSEREAALEETHRLL  231
             Q  V+    + + +  D S+ D  T  +    + +   W +I +   +R   L++     
Sbjct  1691  QVRVNSLTHMVVVV--DESSGDHATAALEEQLKVLGDRWANICRWTEDRWVLLQDILLKW  1864

Query  232   QQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDV  291
             Q+F  +   F  WL+E E   N +     K     D   +   +++   L+ ++E     
Sbjct  1865  QRFTEEQCLFSTWLSEKEDALNKIHTTGFK-----DQGEMLSSLQKLAVLKTDLEKKKQT  2029

Query  292   YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ  346
                L   +Q +L +L+ +  A  ++  LDN   +W  L +K       LE SS Q
Sbjct  2030  MDKLSSLNQDLLSTLKNTLVAQKMEAWLDNFAQRWDNLVQK-------LEKSSTQ  2173


>ref|XM_001488124.2| PREDICTED: Equus caballus similar to dystrophin (LOC100051515), 
mRNA
Length=11148

 Score = 2443 bits (6332),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1185/1270 (93%), Positives = 1200/1270 (94%), Gaps = 65/1270 (5%)
 Frame = +1

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
              MPSSL+LEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKAT+QDL
Sbjct  7411   MPSSLLLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATLQDL  7590

Query  61     EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
              EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQ+QWDEVQEHLQNRRQQLNEMLK
Sbjct  7591   EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQSQWDEVQEHLQNRRQQLNEMLK  7770

Query  121    DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              DSTQWLEAKEEAEQVLGQARAKLESWKEGPYT+DAIQ+KITETKQLAKDLRQWQ NVDVA
Sbjct  7771   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTMDAIQRKITETKQLAKDLRQWQINVDVA  7950

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              NDLALKLLRDYSADDTRKVHMITENINASW SIHKRVSE+EAALEETHRLLQQFPLDLEK
Sbjct  7951   NDLALKLLRDYSADDTRKVHMITENINASWASIHKRVSEQEAALEETHRLLQQFPLDLEK  8130

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              FLAWLTEAETTANVLQDAT KERLLEDSKGV+ELMKQWQDLQGEIEAHTD+YHNLDEN Q
Sbjct  8131   FLAWLTEAETTANVLQDATHKERLLEDSKGVRELMKQWQDLQGEIEAHTDIYHNLDENGQ  8310

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
              KILRSLEGSDDA++LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  8311   KILRSLEGSDDAIVLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  8490

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  8491   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  8670

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE LERLQELQ
Sbjct  8671   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDEALERLQELQ  8850

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
              EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR
Sbjct  8851   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  9030

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDR+RQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  9031   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRIRQLHEAHRDFGPASQHFLSTSVQGP  9210

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              WERAISPNKVPYYINHETQTTCWDHPKMTELYQSL                         
Sbjct  9211   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSL-------------------------  9315

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              +DLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEH+NLVNVPLCVDMCLN
Sbjct  9316   VDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHSNLVNVPLCVDMCLN  9495

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  9496   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  9675

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  9676   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  9855

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  9856   VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  10035

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
              TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  10036  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  10215

Query  949    -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
               PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  10216  APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  10395

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
              QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQH+HKGLSPLP
Sbjct  10396  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHDHKGLSPLP  10575

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  10576  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  10755

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTS+SMGEEDLLSPPQDTSTGLEEVM
Sbjct  10756  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSESMGEEDLLSPPQDTSTGLEEVM  10935

Query  1188   EQLNNSFPSSRG---------------------------HNVGSLFHMADDLGRAMESLV  1220
              EQLNNSFPSSRG                           HNVGSLFHMADDLGRAMESLV
Sbjct  10936  EQLNNSFPSSRGRNTPGKPMRELIADARILLVSASPTHRHNVGSLFHMADDLGRAMESLV  11115

Query  1221   SVMTDEEGAE  1230
              SVMTDEEGAE
Sbjct  11116  SVMTDEEGAE  11145


 Score = 70.5 bits (171),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 84/375 (22%), Positives = 167/375 (44%), Gaps = 47/375 (12%)
 Frame = +1

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             +PS+ + E+          T ++  LS ++Q++ +  +   D ED+     KQ+ +++++
Sbjct  6037  VPSTYLTEI----------THVSQALSEVEQLLNAPDLRAKDFEDL----FKQEESLKNI  6174

Query  61    EQRRPQLEELITAAQNLKN---KTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNE  117
             +    Q+   I    N K    +++    R  + + + ++  QW+ V +  ++R+ + + 
Sbjct  6175  KDNLQQISGRIDVIHNKKTAALQSATPAERAKLQEALSQLDFQWESVNKVYKDRQGRFDR  6354

Query  118   M----------LKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLA  167
                        +K   QWL    EAEQ L + +   E+W+   Y            K+L 
Sbjct  6355  SVEKWRRFHYDMKIFNQWLT---EAEQFLKKTQIP-ENWEHAKYK--------WYLKELQ  6498

Query  168   KDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEET  227
               + Q QT V V N    ++++  S  D   +     ++N  W+ + K+++ER+  LEE 
Sbjct  6499  DGIGQRQTVVRVLNATGEEIIQQSSKTDASILQEKLGSLNLRWQEVCKQLAERKKRLEEQ  6678

Query  228   HRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEA  287
               +L +F  DL +F+ WL EA+   +V  +   +++L       KE + Q + L  E+  
Sbjct  6679  KNILSEFQRDLNEFVLWLEEADNVTSVPLEPGNEQQL-------KEKLDQVKLLAEELPL  6837

Query  288   HTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ  346
                +   L+E    +L S   S +D   L+ +L   N +W ++ +     +  +EA    
Sbjct  6838  RQGILKQLNETGGTVLVSAPISPEDQDKLENKLKQTNLQWIKVSRDLPEKQGEIEAHIKD  7017

Query  347   WKRLHLSLQELLVWL  361
               +    L  LL+WL
Sbjct  7018  LGQFEEQLNHLLLWL  7062


 Score = 50.4 bits (119),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 115/545 (21%), Positives = 230/545 (42%), Gaps = 53/545 (9%)
 Frame = +1

Query  33    IKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITD  92
             +K+Q +   +   I   +   K  +  L   +PQ+E L   +  LK K   Q    +  D
Sbjct  2608  LKTQPITTSEPTAIKSQLKICKDEVSRLSALQPQIERLKIQSIALKEK--GQGPMFLDAD  2781

Query  93    RIERIQNQWDEVQEHLQNRRQQLNEMLKD--STQWLEAKEEAEQVLGQARAKLESWKEGP  150
              +    N +++V   +Q R ++L  +      T++ E        + Q+  KL   +   
Sbjct  2782  FVA-FTNHFNQVFADVQAREKELQTIFDALPPTRYQETMSTILTWIQQSETKLSIPQVTV  2958

Query  151   YTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASW  210
                + +++++ E + L   L++ Q+ ++  +    ++ +   ++ +RK     E++   W
Sbjct  2959  TEYEIMEQRLGELQALQSSLQEQQSGLNYLSTTVKEMSKKAPSEISRKYQSEFEDVEGRW  3138

Query  211   RSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER--LLEDS  268
             + +  ++ E    LEE    L++    ++    W+ E         D   KE    L DS
Sbjct  3139  KKLSSQLVEHSQKLEEQIAKLRKIQNHIKTLKKWMAEV--------DVFLKEEWPALGDS  3294

Query  269   KGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSE  328
             + +K+ +KQ + L  +I+      ++++E  QKI    E  + A  L+  L  +N +W  
Sbjct  3295  EILKKQLKQCRLLVNDIQTIQPSLNSVNEGGQKIKNEAE-PEFASRLETELGELNTQWDH  3471

Query  329   LRKKSLNIRSHLEASSDQWKRLHLSLQELLVWL-QLKDDELSRQAPIGGDFP-----AVQ  382
             + ++    +  L+   D+   L   L E+  W+ Q +++ L R      DF       +Q
Sbjct  3472  MCRQVYARKEALKGGLDKTVSLQKDLSEMHEWMTQAEEEYLER------DFEYKTPDELQ  3633

Query  383   KQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTR  442
             K  +  +  K E + KE  +    E+V   + + P    E L +E   L      Q +  
Sbjct  3634  KAVEEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPTAQEALKKELDTLTT--NYQWLCT  3807

Query  443   LLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQP  502
              L  + + +   W       A W     E L  L++  +  +E++ KL+  E I G  + 
Sbjct  3808  RLNGKCKTLEEVW-------ACWH----ELLSYLEKANKWLNEVEFKLKTTENIPGEPEE  3954

Query  503   VGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNT  562
             + ++L DSL++ ++            ++N + +  LA+ LT  G+     N   LE  N+
Sbjct  3955  ISEVL-DSLENLMQHS----------EDNPNQIRILAQTLTDGGVMDELIN-EELETFNS  4098

Query  563   RWKLL  567
             RW+ L
Sbjct  4099  RWREL  4113


 Score = 43.1 bits (100),  Expect = 0.87, Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 135/282 (47%), Gaps = 44/282 (15%)
 Frame = +1

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             LT+WL+  D  +  +  + G   +++  +   KAT +++E+++  L+ +    + LK   
Sbjct  4798  LTEWLAATDMELTKRSAVEGMPSNLDSEVAWGKATQKEIEKQKVHLKSVTELGEALKTVL  4977

Query  82    SNQEARTIITDRIERIQNQWD--------------EVQEHLQNRRQQLNEMLKDSTQWLE  127
               +E  T++ D++  + + W               E Q+H++   Q ++ +    T W+ 
Sbjct  4978  GKKE--TLVEDKLSLLNSNWIAVTSRAEEWLNLLLEYQKHMETFDQHVDHI----TNWI-  5136

Query  128   AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
                +A+ +L       ES K+ P      Q+K    K+L  ++   +  VD   D A  L
Sbjct  5137  --IQADTLLD------ESEKKKP------QQKEDVLKRLKAEMNDMRPKVDSTRDQAANL  5274

Query  188   LRDYSADDTRKV--HMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWL  245
             + +   D  RKV    I+E +N  + +I  R+   +A++    + L+QF  D++K L  L
Sbjct  5275  MAN-RGDHCRKVVEPKISE-LNHRFAAISHRIKTGKASI--PLKELEQFNSDIQKLLEPL  5442

Query  246   TEAETTANV-LQDATRKERLLEDSKG-VKELMKQWQDLQGEI  285
              EAE    V L++    + + ED++G VKEL+++  +LQ  I
Sbjct  5443  -EAEIQQGVNLKEEDFNKDMSEDNEGTVKELLQRGDNLQQRI  5565


 Score = 41.6 bits (96),  Expect = 2.6, Method: Compositional matrix adjust.
 Identities = 80/359 (22%), Positives = 148/359 (41%), Gaps = 43/359 (11%)
 Frame = +1

Query  3     SSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQ  62
             SSLM    +L  +  A  E+  WL   +  +++Q  +  D+E++ E     +  M DL  
Sbjct  1051  SSLMETEVSLDSYQTALEEVLSWLLSAEDTLQAQGEISNDVEEVKEQFHTHEGYMMDLTS  1230

Query  63    RRPQLEELITAAQNL--------KNKTSNQEARTIITDRIERIQNQWDEVQEH-----LQ  109
              + ++  ++     L          K S +    +I D   R+ +       H     LQ
Sbjct  1231  HQGRVGNVLQLGSQLVGTGKLSEDEKLSTRTMDLLIQDGCLRVASMEKIFSLHKVLMDLQ  1410

Query  110   NRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKD  169
             N++      LK+  +WL   EE  +       K+E    GP  ++A++ +I + K L +D
Sbjct  1411  NKQ------LKELNEWLTKTEERTK-------KMEKEPLGP-DLEALKHQIQQHKVLQED  1548

Query  170   LRQWQTNVDVANDLALKLLRDYSADD--TRKVHMITENINASWRSIHKRVSEREAALEET  227
             L Q Q  V+    + + +  D S+ D  T  +    + +   W +I +   +R   L++ 
Sbjct  1549  LEQEQVRVNSLTHMVVVV--DESSGDHATAALEEQLKVLGDRWANICRWTEDRWVLLQDI  1722

Query  228   HRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEA  287
                 Q+F  +   F  WL+E E   N +     K     D   +   +++   L+ ++E 
Sbjct  1723  LLKWQRFTEEQCLFSTWLSEKEDAVNKIHTTGFK-----DQSEMLYSLQKLAVLKTDLEK  1887

Query  288   HTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ  346
                    L   +Q +L +L+ +  A  ++  LD+   +W  L +K       LE SS Q
Sbjct  1888  KKQTMDKLCSLNQDLLSTLKNTSVAQKMEAWLDSFAQRWDNLVQK-------LEKSSAQ  2043


>gb|AF070485.1| Canis familiaris dystrophin mRNA, complete cds
Length=13887

 Score = 2429 bits (6296),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1166/1215 (95%), Positives = 1186/1215 (97%), Gaps = 13/1215 (1%)
 Frame = +2

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
              MPSSL+LEVPALADFNRAWTELTDWLSLLD+VIKSQRVMVGDLEDINEMIIKQKAT+QDL
Sbjct  7655   MPSSLLLEVPALADFNRAWTELTDWLSLLDRVIKSQRVMVGDLEDINEMIIKQKATLQDL  7834

Query  61     EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
              EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQ+QWDEVQEHLQNRR QL EMLK
Sbjct  7835   EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQSQWDEVQEHLQNRRLQLTEMLK  8014

Query  121    DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              DSTQWLEAKEEAEQVLGQARAKLESWKE PYTVDAIQKKITETKQLAKDLRQWQ NVDVA
Sbjct  8015   DSTQWLEAKEEAEQVLGQARAKLESWKEAPYTVDAIQKKITETKQLAKDLRQWQINVDVA  8194

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              NDLALKLLRDYSADDTRKVHMITENINASW SIHKR+SEREAALEETHRLLQQFPLDLEK
Sbjct  8195   NDLALKLLRDYSADDTRKVHMITENINASWASIHKRLSEREAALEETHRLLQQFPLDLEK  8374

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              FLAWLTEAETTANVLQDAT KERLLEDSKGV+ELMKQWQDLQGEIEAHTD+YHNLDEN Q
Sbjct  8375   FLAWLTEAETTANVLQDATHKERLLEDSKGVRELMKQWQDLQGEIEAHTDIYHNLDENGQ  8554

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
              K+LRSLEGSDDA LLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  8555   KVLRSLEGSDDAALLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  8734

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  8735   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  8914

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNT+WEKLN+HSADWQRKIDE LERLQELQ
Sbjct  8915   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTQWEKLNVHSADWQRKIDEALERLQELQ  9094

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
              EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEI PLKENVS+VNDLAR
Sbjct  9095   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEITPLKENVSYVNDLAR  9274

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QLTTLGIQLSPYNL+TLEDLNTRWKLLQVA+EDR+RQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  9275   QLTTLGIQLSPYNLNTLEDLNTRWKLLQVAIEDRIRQLHEAHRDFGPASQHFLSTSVQGP  9454

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  9455   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  9634

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLLSLSAACDALDQHNLKQNDQPMDILQ+INCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  9635   LDLLSLSAACDALDQHNLKQNDQPMDILQVINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  9814

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  9815   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  9994

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  9995   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  10174

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  10175  VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  10354

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
              TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  10355  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  10534

Query  949    -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
               PASSPQLSHDDTHSRIEHYASRL +MENSNGSYLNDSISPNESIDDEHLLIQHY +SLN
Sbjct  10535  APASSPQLSHDDTHSRIEHYASRLKKMENSNGSYLNDSISPNESIDDEHLLIQHYWRSLN  10714

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
              Q+SPLSQPRSPAQILISLESEERGELERILADLE  NRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  10715  QESPLSQPRSPAQILISLESEERGELERILADLEGRNRNLQAEYDRLKQQHEHKGLSPLP  10894

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  10895  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  11074

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTS+SMGEEDLLSPPQDTSTGLEEVM
Sbjct  11075  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSESMGEEDLLSPPQDTSTGLEEVM  11254

Query  1188   EQLNNSFPSSRGHNV  1202
              EQLN+SFPSSRG N 
Sbjct  11255  EQLNHSFPSSRGRNT  11299


 Score = 70.1 bits (170),  Expect = 8e-09, Method: Compositional matrix adjust.
 Identities = 83/375 (22%), Positives = 168/375 (44%), Gaps = 47/375 (12%)
 Frame = +2

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             +PS+ + E+          T ++  LS +++++ +  +   D ED+     KQ+ +++++
Sbjct  6281  VPSTYLTEI----------THVSQALSEVEELLNAPDLCAQDFEDL----FKQEESLKNI  6418

Query  61    EQRRPQLEELITAAQNLKNK---TSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNE  117
             +    Q+   I    N K     ++    R  + + + R+  QW+ V    ++R+ + + 
Sbjct  6419  KDSLQQISGRIDIIHNKKTAALHSATPAERAKLQEALSRLDFQWERVNNMYKDRQGRFDR  6598

Query  118   M----------LKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLA  167
                        +K   QWL    EAEQ L + +   E+W+   Y            K+L 
Sbjct  6599  SVEKWRRFHYDMKILNQWLT---EAEQFLKKTQIP-ENWEHAKYK--------WYLKELQ  6742

Query  168   KDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEET  227
               + Q Q+ V V N    ++++  S  D   +     ++N  W+ + K+++ER+  LEE 
Sbjct  6743  DGIGQRQSVVRVLNATGEEIIQQSSKTDASILQEKLGSLNLRWQEVCKQLAERKKRLEEQ  6922

Query  228   HRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEA  287
               +L +F  D+ +F+ WL EA+  AN+  +   +++L       KE ++Q + L  E+  
Sbjct  6923  KNILSEFQRDVNEFVLWLEEADNVANIPLEPGNEQQL-------KEKLEQVKLLAEELPL  7081

Query  288   HTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ  346
                +   L+E    +L S   S ++   L+ +L   N +W ++ +     +  +EA    
Sbjct  7082  RQGILKQLNETGGTVLVSAPLSPEEQDKLENKLKQTNLQWIKVSRNLPEKQEEIEAHVKD  7261

Query  347   WKRLHLSLQELLVWL  361
               +L   L  LL+WL
Sbjct  7262  LGQLEEQLNHLLLWL  7306


 Score = 70.1 bits (170),  Expect = 8e-09, Method: Compositional matrix adjust.
 Identities = 32/33 (96%), Positives = 33/33 (100%), Gaps = 0/33 (0%)
 Frame = +1

Query  1198   RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
              RGHNVGSLFH+ADDLGRAMESLVSVMTDEEGAE
Sbjct  11317  RGHNVGSLFHLADDLGRAMESLVSVMTDEEGAE  11415


 Score = 45.4 bits (106),  Expect = 0.22, Method: Compositional matrix adjust.
 Identities = 78/346 (22%), Positives = 145/346 (41%), Gaps = 33/346 (9%)
 Frame = +2

Query  12    LADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELI  71
             L  +  A  E+  WL   +  +++Q  +  D+E++ E     +  M DL   + ++  ++
Sbjct  1313  LDSYQTALEEVLSWLLSAEDALQAQGEISNDVEEVKEQFHTHEGYMMDLTSHQGRVGNVL  1492

Query  72    TAAQNL--------KNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQL-NEMLKDS  122
                  L          +T  QE   ++  R E ++    E Q +L      L N+ LK+ 
Sbjct  1493  QLGSQLIGTGKLSEDEETEVQEQMNLLNSRWECLRVASMEKQSNLHKVLMDLQNQQLKEL  1672

Query  123   TQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVAND  182
               WL   EE  +       K+E    GP  ++ +++++ + K L +DL Q Q  V+    
Sbjct  1673  NDWLTKTEERTR-------KMEKEPLGP-DIEDLKRQVQQHKVLQEDLEQEQVRVNSLTH  1828

Query  183   LALKLLRDYSADD--TRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
             + + +  D S+ D  T  +    + +   W +I +   +R   L++     Q+F  +   
Sbjct  1829  MVVVV--DESSGDHATAALEEQLKVLGDRWANICRWTEDRWVLLQDILLKWQRFTEEQCL  2002

Query  241   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
             F AWL+E E   N +     K     D   V   +++   L+ ++E        L   +Q
Sbjct  2003  FSAWLSEKEDAVNKIHTTGFK-----DQSEVLSNLQKLAVLKTDLEKKKQTMDKLCSLNQ  2167

Query  301   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ  346
              +L +L+ +  A  ++  LDN   +W  L +K       LE SS Q
Sbjct  2168  DLLSALKNTVVAHKMEAWLDNFAQRWDNLVQK-------LEKSSAQ  2284


 Score = 41.6 bits (96),  Expect = 2.6, Method: Compositional matrix adjust.
 Identities = 66/332 (19%), Positives = 141/332 (42%), Gaps = 33/332 (9%)
 Frame = +2

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             L  W++ +D  +K +   +GD E +   + + +  + D++  +P L  +   AQ +KN+ 
Sbjct  3473  LKKWITEVDVFLKEEWPALGDSEILKRQLKQCRLLVNDIQTIQPSLNSVNEGAQKMKNEA  3652

Query  82    SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
               + A  + T+ +  +  QWD +   +  R++ L   L  +    +   E  + + QA  
Sbjct  3653  EPEFAGRLETE-LRELNTQWDYMCRQVYARKEALKGGLDKTVSLQKDLSEMHEWMTQAE-  3826

Query  142   KLESWKEGPY---TVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRK  198
               E + E  +   T D +Q  + E K+  ++ +Q +  V +  +    ++          
Sbjct  3827  --EEYLERDFEYKTPDELQTAVEEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPAAQEA  4000

Query  199   VHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAE----TTANV  254
             +    + +  +++ +  R++ +   LEE      +    LEK   WL+E E    TT N+
Sbjct  4001  LKKELDTLTTNYQWLCTRLNGKCKTLEEVWACWHELLSYLEKANKWLSEVEVKLKTTENI  4180

Query  255   LQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAV-  313
                          S G +E+ +    L+  ++      H+ D  +Q  + +   +D  V 
Sbjct  4181  -------------SGGAEEIAEVLDSLENLMQ------HSEDNPNQIRILAQTLTDGGVM  4303

Query  314   --LLQRRLDNMNFKWSELRKKSLNIRSHLEAS  343
               L+   L+  N +W EL ++++  +  LE S
Sbjct  4304  DELINEELETFNSRWRELHEEAVRRQKLLEQS  4399


 Score = 41.6 bits (96),  Expect = 3.0, Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 129/269 (47%), Gaps = 18/269 (6%)
 Frame = +2

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             LT+WL+  D  +  +  + G   +++  +   KAT +++E+++  L+ +    + LK   
Sbjct  5042  LTEWLAATDMELTKRSAVEGMPSNLDSEVAWGKATQKEIEKQKVHLKSVTEVGEALKTVL  5221

Query  82    SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
               +E   ++ D++  + + W  V    +     L E  K    + +  +     + QA A
Sbjct  5222  GKKE--MLVEDKLSLLNSNWIAVTSRAEEWLNLLLEYQKHMETFDQNVDYITNWIIQADA  5395

Query  142   KL-ESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKV-  199
              L ES K+ P      Q+K    K+L  ++   +  VD   D A  L+ +   D  RKV 
Sbjct  5396  LLDESEKKKP------QQKEDILKRLKAEMNDIRPKVDSTRDQAANLMAN-RGDHCRKVV  5554

Query  200   -HMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANV-LQD  257
                I+E +N  + +I  R+   +A++    + L+QF  D++K L  L EAE    V L++
Sbjct  5555  EPKISE-LNHRFAAISHRIKTGKASI--PLKELEQFNSDIQKLLEPL-EAEIQQGVNLKE  5722

Query  258   ATRKERLLEDSKG-VKELMKQWQDLQGEI  285
                 + + ED++G VKEL+++  +LQ  I
Sbjct  5723  EDFNKDMSEDNEGTVKELLQRGDNLQQRI  5809


 Score = 40.0 bits (92),  Expect = 8.8, Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 76/147 (51%), Gaps = 4/147 (2%)
 Frame = +2

Query  420   GLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQEL  479
             GL  L    +E+  +    +++R  + + EE+   W+KL+    +  +K++E + +L+++
Sbjct  3275  GLNYLSTTVKEMSKKAPLSDISRKYQSEFEEIEGRWKKLSSQLVEHCQKLEEQMAKLRKI  3454

Query  480   QEATDELDLKLRQAEV-IKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDL  538
             Q     L   + + +V +K  W  +GD  I  L+  L++ + L  +I  ++ +++ VN+ 
Sbjct  3455  QNHIKTLKKWITEVDVFLKEEWPALGDSEI--LKRQLKQCRLLVNDIQTIQPSLNSVNEG  3628

Query  539   ARQLTTLGIQLSPYNLST-LEDLNTRW  564
             A+++           L T L +LNT+W
Sbjct  3629  AQKMKNEAEPEFAGRLETELRELNTQW  3709


>ref|NM_007868.5| Mus musculus dystrophin, muscular dystrophy (Dmd), mRNA
Length=13857

 Score = 2414 bits (6257),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1159/1215 (95%), Positives = 1182/1215 (97%), Gaps = 13/1215 (1%)
 Frame = +2

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
              MPSSL+LEVPALADFNRAWTELTDWLSLLD+VIKSQRVMVGDLEDINEMIIKQKAT+QDL
Sbjct  7607   MPSSLLLEVPALADFNRAWTELTDWLSLLDRVIKSQRVMVGDLEDINEMIIKQKATLQDL  7786

Query  61     EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
              EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQ QWDEVQE LQNRRQQLNEMLK
Sbjct  7787   EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQIQWDEVQEQLQNRRQQLNEMLK  7966

Query  121    DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              DSTQWLEAKEEAEQV+GQ R KL+SWKEGP+TVDAIQKKITETKQLAKDLRQ Q +VDVA
Sbjct  7967   DSTQWLEAKEEAEQVIGQVRGKLDSWKEGPHTVDAIQKKITETKQLAKDLRQRQISVDVA  8146

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              NDLALKLLRDYSADDTRKVHMITENIN SW +IHKRVSE+EAALEETHRLLQQFPLDLEK
Sbjct  8147   NDLALKLLRDYSADDTRKVHMITENINTSWGNIHKRVSEQEAALEETHRLLQQFPLDLEK  8326

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              FL+W+TEAETTANVLQDA+RKE+LLEDS+GV+ELMK WQDLQGEIE HTD+YHNLDEN Q
Sbjct  8327   FLSWITEAETTANVLQDASRKEKLLEDSRGVRELMKPWQDLQGEIETHTDIYHNLDENGQ  8506

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
              KILRSLEGSD+A LLQRRLDNMNFKWSEL+KKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  8507   KILRSLEGSDEAPLLQRRLDNMNFKWSELQKKSLNIRSHLEASSDQWKRLHLSLQELLVW  8686

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              LQLKDDELSRQAPIGGDFPAVQKQND+HRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  8687   LQLKDDELSRQAPIGGDFPAVQKQNDIHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  8866

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              LEKLYQEPRELPPEERAQNVTRLLRKQAEEVN EW+KLNL SADWQRKIDE LERLQELQ
Sbjct  8867   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNAEWDKLNLRSADWQRKIDEALERLQELQ  9046

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
              EA DELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENV+ VNDLA 
Sbjct  9047   EAADELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVNRVNDLAH  9226

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QLTTLGIQLSPYNLSTLEDLNTRW+LLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  9227   QLTTLGIQLSPYNLSTLEDLNTRWRLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  9406

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  9407   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  9586

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  9587   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  9766

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  9767   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  9946

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  9947   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  10126

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  10127  VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  10306

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
              TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  10307  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  10486

Query  949    -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
               PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  10487  APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  10666

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
              QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  10667  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  10846

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  10847  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  11026

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTS+SMGEEDLLSPPQDTSTGLEEVM
Sbjct  11027  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSESMGEEDLLSPPQDTSTGLEEVM  11206

Query  1188   EQLNNSFPSSRGHNV  1202
              EQLNNSFPSSRG N 
Sbjct  11207  EQLNNSFPSSRGRNA  11251


 Score = 71.6 bits (174),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/33 (100%), Positives = 33/33 (100%), Gaps = 0/33 (0%)
 Frame = +1

Query  1198   RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
              RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  11269  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  11367


 Score = 48.9 bits (115),  Expect = 0.019, Method: Compositional matrix adjust.
 Identities = 67/327 (20%), Positives = 139/327 (42%), Gaps = 30/327 (9%)
 Frame = +2

Query  164   KQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAA  223
             K +  +L+Q    +D+ +      L+  ++ +  KV      ++     +H+   ER+  
Sbjct  6368  KNIKDNLQQISGRIDIIHKKKTAALQSATSMEKVKVQEAVAQMDFQGEKLHRMYKERQGR  6547

Query  224   LEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQG  283
              + +    + F  D++ F  WL E E      Q+    E         K  +K+ QD  G
Sbjct  6548  FDRSVEKWRHFHYDMKVFNQWLNEVEQFFKKTQNPENWEH-----AKYKWYLKELQDGIG  6712

Query  284   EIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEAS  343
             + +A   V   L+   ++I++      D  +LQ +L +++ +W ++ K+    R  +E  
Sbjct  6713  QRQA---VVRTLNATGEEIIQQ-SSKTDVNILQEKLGSLSLRWHDICKELAERRKRIEEQ  6880

Query  344   SDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIM  403
              +        L E ++WL+  D+      P+ GD   +++Q +  +    EL  ++ ++ 
Sbjct  6881  KNVLSEFQRDLNEFVLWLEEADN--IAITPL-GDEQQLKEQLEQVKLLAEELPLRQGILK  7051

Query  404   STLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSA  463
                ET    L   P+              PEE+ +     L K+ ++ N +W K++    
Sbjct  7052  QLNETGGAVLVSAPIR-------------PEEQDK-----LEKKLKQTNLQWIKVSRALP  7177

Query  464   DWQRKIDETLERLQELQEATDELDLKL  490
             + Q +++  L+  ++L+E  D L L L
Sbjct  7178  EKQGELEVHLKDFRQLEEQLDHLLLWL  7258


 Score = 47.8 bits (112),  Expect = 0.037, Method: Compositional matrix adjust.
 Identities = 95/429 (22%), Positives = 182/429 (42%), Gaps = 45/429 (10%)
 Frame = +2

Query  154   DAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSI  213
             + +++++ + + L   L++ Q   +  +D   ++ +   ++  +K     E I   W+ +
Sbjct  3170  EIMEERLGKLQALQSSLKEQQNGFNYLSDTVKEMAKKAPSEICQKYLSEFEEIEGHWKKL  3349

Query  214   HKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER--LLEDSKGV  271
               ++ E    LEE    L++F   ++    W+ E         D   KE    L D++ +
Sbjct  3350  SSQLVESCQKLEEHMNKLRKFQNHIKTLQKWMAEV--------DVFLKEEWPALGDAEIL  3505

Query  272   KELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRK  331
             K+ +KQ + L G+I+      ++++E  QKI +S    + A  L+  L  +N +W  + +
Sbjct  3506  KKQLKQCRLLVGDIQTIQPSLNSVNEGGQKI-KSEAELEFASRLETELRELNTQWDHICR  3682

Query  332   KSLNIRSHLEASSDQWKRLHLSLQELLVWL-QLKDDELSRQAPIGGDFPAVQKQNDVHRA  390
             +    +  L+A  D+   L   L E+  W+ Q +++ L R               ++ RA
Sbjct  3683  QVYTRKEALKAGLDKTVSLQKDLSEMHEWMTQAEEEYLERDFEYKTPDELQTAVEEMKRA  3862

Query  391   FKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEE  450
              K E   KE  +    ETV   +   P    E L +E   L      Q +   L  + + 
Sbjct  3863  -KEEALQKETKVKLLTETVNSVIAHAPPSAQEALKKELETLTT--NYQWLCTRLNGKCKT  4033

Query  451   VNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLL--I  508
             +   W       A W     E L  L++  +  +E++LKL+  E +    + + ++L  +
Sbjct  4034  LEEVW-------ACWH----ELLSYLEKANKWLNEVELKLKTMENVPAGPEEITEVLESL  4180

Query  509   DSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQ  568
             ++L  H E             EN + +  LA+ LT  G+     N   LE  N+RW+ L 
Sbjct  4181  ENLMHHSE-------------ENPNQIRLLAQTLTDGGVMDELIN-EELETFNSRWRELH  4318

Query  569   VAVEDRVRQ  577
                E+ VR+
Sbjct  4319  ---EEAVRK  4336


 Score = 45.1 bits (105),  Expect = 0.24, Method: Compositional matrix adjust.
 Identities = 76/367 (20%), Positives = 156/367 (42%), Gaps = 31/367 (8%)
 Frame = +2

Query  12    LADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELI  71
             L  F      L  W++ +D  +K +   +GD E + + + + +  + D++  +P L  + 
Sbjct  3401  LRKFQNHIKTLQKWMAEVDVFLKEEWPALGDAEILKKQLKQCRLLVGDIQTIQPSLNSVN  3580

Query  72    TAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEE  131
                Q +K++   + A  + T+ +  +  QWD +   +  R++ L   L  +    +   E
Sbjct  3581  EGGQKIKSEAELEFASRLETE-LRELNTQWDHICRQVYTRKEALKAGLDKTVSLQKDLSE  3757

Query  132   AEQVLGQARAKLESWKEGPY---TVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLL  188
               + + QA    E + E  +   T D +Q  + E K+  ++  Q +T V +  +    ++
Sbjct  3758  MHEWMTQAE---EEYLERDFEYKTPDELQTAVEEMKRAKEEALQKETKVKLLTETVNSVI  3928

Query  189   RDY--SADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
                  SA +  K  + T   N  W  +  R++ +   LEE      +    LEK   WL 
Sbjct  3929  AHAPPSAQEALKKELETLTTNYQW--LCTRLNGKCKTLEEVWACWHELLSYLEKANKWLN  4102

Query  247   EAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKI-LRS  305
             E E     +++            G +E+ +  + L+       ++ H+ +EN  +I L +
Sbjct  4103  EVELKLKTMENV---------PAGPEEITEVLESLE-------NLMHHSEENPNQIRLLA  4234

Query  306   LEGSDDAV---LLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQ  362
                +D  V   L+   L+  N +W EL ++++  +  LE S    + +  SL  +   L+
Sbjct  4235  QTLTDGGVMDELINEELETFNSRWRELHEEAVRKQKLLEQSIQSAQEIEKSLHLIQESLE  4414

Query  363   LKDDELS  369
               D +L+
Sbjct  4415  FIDKQLA  4435


 Score = 44.3 bits (103),  Expect = 0.41, Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 137/282 (48%), Gaps = 44/282 (15%)
 Frame = +2

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             LT+WL+  D  +  +  + G   +++  +   KAT +++E+++  L+ +    ++LK   
Sbjct  5000  LTEWLAATDTELTKRSAVEGMPSNLDSEVAWGKATQKEIEKQKAHLKSVTELGESLKMVL  5179

Query  82    SNQEARTIITDRIERIQNQWD--------------EVQEHLQNRRQQLNEMLKDSTQWLE  127
               +E  T++ D++  + + W               E Q+H++   Q + ++    T+W+ 
Sbjct  5180  GKKE--TLVEDKLSLLNSNWIAVTSRVEEWLNLLLEYQKHMETFDQNIEQI----TKWI-  5338

Query  128   AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
                 A+++L       ES K+ P      Q+K    K+L  ++   +  VD   D A KL
Sbjct  5339  --IHADELLD------ESEKKKP------QQKEDILKRLKAEMNDMRPKVDSTRDQAAKL  5476

Query  188   LRDYSADDTRKV--HMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWL  245
             + +   D  RKV    I+E +N  + +I  R+   +A++    + L+QF  D++K L  L
Sbjct  5477  MAN-RGDHCRKVVEPQISE-LNRRFAAISHRIKTGKASI--PLKELEQFNSDIQKLLEPL  5644

Query  246   TEAETTANV-LQDATRKERLLEDSKG-VKELMKQWQDLQGEI  285
              EAE    V L++    + + ED++G V EL+++  +LQ  I
Sbjct  5645  -EAEIQQGVNLKEEDFNKDMSEDNEGTVNELLQRGDNLQQRI  5767


>gb|M68859.1|MUSDYSA Mouse dystrophin mRNA, complete cds
Length=13815

 Score = 2414 bits (6257),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1159/1215 (95%), Positives = 1182/1215 (97%), Gaps = 13/1215 (1%)
 Frame = +2

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
              MPSSL+LEVPALADFNRAWTELTDWLSLLD+VIKSQRVMVGDLEDINEMIIKQKAT+QDL
Sbjct  7580   MPSSLLLEVPALADFNRAWTELTDWLSLLDRVIKSQRVMVGDLEDINEMIIKQKATLQDL  7759

Query  61     EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
              EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQ QWDEVQE LQNRRQQLNEMLK
Sbjct  7760   EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQIQWDEVQEQLQNRRQQLNEMLK  7939

Query  121    DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              DSTQWLEAKEEAEQV+GQ R KL+SWKEGP+TVDAIQKKITETKQLAKDLRQ Q +VDVA
Sbjct  7940   DSTQWLEAKEEAEQVIGQVRGKLDSWKEGPHTVDAIQKKITETKQLAKDLRQRQISVDVA  8119

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              NDLALKLLRDYSADDTRKVHMITENIN SW +IHKRVSE+EAALEETHRLLQQFPLDLEK
Sbjct  8120   NDLALKLLRDYSADDTRKVHMITENINTSWGNIHKRVSEQEAALEETHRLLQQFPLDLEK  8299

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              FL+W+TEAETTANVLQDA+RKE+LLEDS+GV+ELMK WQDLQGEIE HTD+YHNLDEN Q
Sbjct  8300   FLSWITEAETTANVLQDASRKEKLLEDSRGVRELMKPWQDLQGEIETHTDIYHNLDENGQ  8479

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
              KILRSLEGSD+A LLQRRLDNMNFKWSEL+KKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  8480   KILRSLEGSDEAPLLQRRLDNMNFKWSELQKKSLNIRSHLEASSDQWKRLHLSLQELLVW  8659

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              LQLKDDELSRQAPIGGDFPAVQKQND+HRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  8660   LQLKDDELSRQAPIGGDFPAVQKQNDIHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  8839

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              LEKLYQEPRELPPEERAQNVTRLLRKQAEEVN EW+KLNL SADWQRKIDE LERLQELQ
Sbjct  8840   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNAEWDKLNLRSADWQRKIDEALERLQELQ  9019

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
              EA DELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENV+ VNDLA 
Sbjct  9020   EAADELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVNRVNDLAH  9199

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QLTTLGIQLSPYNLSTLEDLNTRW+LLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  9200   QLTTLGIQLSPYNLSTLEDLNTRWRLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  9379

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  9380   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  9559

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  9560   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  9739

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  9740   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  9919

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  9920   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  10099

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  10100  VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  10279

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
              TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  10280  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  10459

Query  949    -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
               PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  10460  APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  10639

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
              QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  10640  QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  10819

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  10820  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  10999

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTS+SMGEEDLLSPPQDTSTGLEEVM
Sbjct  11000  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSESMGEEDLLSPPQDTSTGLEEVM  11179

Query  1188   EQLNNSFPSSRGHNV  1202
              EQLNNSFPSSRG N 
Sbjct  11180  EQLNNSFPSSRGRNA  11224


 Score = 71.6 bits (174),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/33 (100%), Positives = 33/33 (100%), Gaps = 0/33 (0%)
 Frame = +1

Query  1198   RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
              RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  11242  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  11340


 Score = 48.9 bits (115),  Expect = 0.019, Method: Compositional matrix adjust.
 Identities = 67/327 (20%), Positives = 139/327 (42%), Gaps = 30/327 (9%)
 Frame = +2

Query  164   KQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAA  223
             K +  +L+Q    +D+ +      L+  ++ +  KV      ++     +H+   ER+  
Sbjct  6341  KNIKDNLQQISGRIDIIHKKKTAALQSATSMEKVKVQEAVAQMDFQGEKLHRMYKERQGR  6520

Query  224   LEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQG  283
              + +    + F  D++ F  WL E E      Q+    E         K  +K+ QD  G
Sbjct  6521  FDRSVEKWRHFHYDMKVFNQWLNEVEQFFKKTQNPENWEH-----AKYKWYLKELQDGIG  6685

Query  284   EIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEAS  343
             + +A   V   L+   ++I++      D  +LQ +L +++ +W ++ K+    R  +E  
Sbjct  6686  QRQA---VVRTLNATGEEIIQQ-SSKTDVNILQEKLGSLSLRWHDICKELAERRKRIEEQ  6853

Query  344   SDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIM  403
              +        L E ++WL+  D+      P+ GD   +++Q +  +    EL  ++ ++ 
Sbjct  6854  KNVLSEFQRDLNEFVLWLEEADN--IAITPL-GDEQQLKEQLEQVKLLAEELPLRQGILK  7024

Query  404   STLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSA  463
                ET    L   P+              PEE+ +     L K+ ++ N +W K++    
Sbjct  7025  QLNETGGAVLVSAPIR-------------PEEQDK-----LEKKLKQTNLQWIKVSRALP  7150

Query  464   DWQRKIDETLERLQELQEATDELDLKL  490
             + Q +++  L+  ++L+E  D L L L
Sbjct  7151  EKQGELEVHLKDFRQLEEQLDHLLLWL  7231


 Score = 47.8 bits (112),  Expect = 0.037, Method: Compositional matrix adjust.
 Identities = 95/429 (22%), Positives = 182/429 (42%), Gaps = 45/429 (10%)
 Frame = +2

Query  154   DAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSI  213
             + +++++ + + L   L++ Q   +  +D   ++ +   ++  +K     E I   W+ +
Sbjct  3143  EIMEERLGKLQALQSSLKEQQNGFNYLSDTVKEMAKKAPSEICQKYLSEFEEIEGHWKKL  3322

Query  214   HKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER--LLEDSKGV  271
               ++ E    LEE    L++F   ++    W+ E         D   KE    L D++ +
Sbjct  3323  SSQLVESCQKLEEHMNKLRKFQNHIKTLQKWMAEV--------DVFLKEEWPALGDAEIL  3478

Query  272   KELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRK  331
             K+ +KQ + L G+I+      ++++E  QKI +S    + A  L+  L  +N +W  + +
Sbjct  3479  KKQLKQCRLLVGDIQTIQPSLNSVNEGGQKI-KSEAELEFASRLETELRELNTQWDHICR  3655

Query  332   KSLNIRSHLEASSDQWKRLHLSLQELLVWL-QLKDDELSRQAPIGGDFPAVQKQNDVHRA  390
             +    +  L+A  D+   L   L E+  W+ Q +++ L R               ++ RA
Sbjct  3656  QVYTRKEALKAGLDKTVSLQKDLSEMHEWMTQAEEEYLERDFEYKTPDELQTAVEEMKRA  3835

Query  391   FKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEE  450
              K E   KE  +    ETV   +   P    E L +E   L      Q +   L  + + 
Sbjct  3836  -KEEALQKETKVKLLTETVNSVIAHAPPSAQEALKKELETLTT--NYQWLCTRLNGKCKT  4006

Query  451   VNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLL--I  508
             +   W       A W     E L  L++  +  +E++LKL+  E +    + + ++L  +
Sbjct  4007  LEEVW-------ACWH----ELLSYLEKANKWLNEVELKLKTMENVPAGPEEITEVLESL  4153

Query  509   DSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQ  568
             ++L  H E             EN + +  LA+ LT  G+     N   LE  N+RW+ L 
Sbjct  4154  ENLMHHSE-------------ENPNQIRLLAQTLTDGGVMDELIN-EELETFNSRWRELH  4291

Query  569   VAVEDRVRQ  577
                E+ VR+
Sbjct  4292  ---EEAVRK  4309


 Score = 45.1 bits (105),  Expect = 0.24, Method: Compositional matrix adjust.
 Identities = 76/367 (20%), Positives = 156/367 (42%), Gaps = 31/367 (8%)
 Frame = +2

Query  12    LADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELI  71
             L  F      L  W++ +D  +K +   +GD E + + + + +  + D++  +P L  + 
Sbjct  3374  LRKFQNHIKTLQKWMAEVDVFLKEEWPALGDAEILKKQLKQCRLLVGDIQTIQPSLNSVN  3553

Query  72    TAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEE  131
                Q +K++   + A  + T+ +  +  QWD +   +  R++ L   L  +    +   E
Sbjct  3554  EGGQKIKSEAELEFASRLETE-LRELNTQWDHICRQVYTRKEALKAGLDKTVSLQKDLSE  3730

Query  132   AEQVLGQARAKLESWKEGPY---TVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLL  188
               + + QA    E + E  +   T D +Q  + E K+  ++  Q +T V +  +    ++
Sbjct  3731  MHEWMTQAE---EEYLERDFEYKTPDELQTAVEEMKRAKEEALQKETKVKLLTETVNSVI  3901

Query  189   RDY--SADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
                  SA +  K  + T   N  W  +  R++ +   LEE      +    LEK   WL 
Sbjct  3902  AHAPPSAQEALKKELETLTTNYQW--LCTRLNGKCKTLEEVWACWHELLSYLEKANKWLN  4075

Query  247   EAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKI-LRS  305
             E E     +++            G +E+ +  + L+       ++ H+ +EN  +I L +
Sbjct  4076  EVELKLKTMENV---------PAGPEEITEVLESLE-------NLMHHSEENPNQIRLLA  4207

Query  306   LEGSDDAV---LLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQ  362
                +D  V   L+   L+  N +W EL ++++  +  LE S    + +  SL  +   L+
Sbjct  4208  QTLTDGGVMDELINEELETFNSRWRELHEEAVRKQKLLEQSIQSAQEIEKSLHLIQESLE  4387

Query  363   LKDDELS  369
               D +L+
Sbjct  4388  FIDKQLA  4408


 Score = 44.3 bits (103),  Expect = 0.41, Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 137/282 (48%), Gaps = 44/282 (15%)
 Frame = +2

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             LT+WL+  D  +  +  + G   +++  +   KAT +++E+++  L+ +    ++LK   
Sbjct  4973  LTEWLAATDTELTKRSAVEGMPSNLDSEVAWGKATQKEIEKQKAHLKSVTELGESLKMVL  5152

Query  82    SNQEARTIITDRIERIQNQWD--------------EVQEHLQNRRQQLNEMLKDSTQWLE  127
               +E  T++ D++  + + W               E Q+H++   Q + ++    T+W+ 
Sbjct  5153  GKKE--TLVEDKLSLLNSNWIAVTSRVEEWLNLLLEYQKHMETFDQNIEQI----TKWI-  5311

Query  128   AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
                 A+++L       ES K+ P      Q+K    K+L  ++   +  VD   D A KL
Sbjct  5312  --IHADELLD------ESEKKKP------QQKEDILKRLKAEMNDMRPKVDSTRDQAAKL  5449

Query  188   LRDYSADDTRKV--HMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWL  245
             + +   D  RKV    I+E +N  + +I  R+   +A++    + L+QF  D++K L  L
Sbjct  5450  MAN-RGDHCRKVVEPQISE-LNRRFAAISHRIKTGKASI--PLKELEQFNSDIQKLLEPL  5617

Query  246   TEAETTANV-LQDATRKERLLEDSKG-VKELMKQWQDLQGEI  285
              EAE    V L++    + + ED++G V EL+++  +LQ  I
Sbjct  5618  -EAEIQQGVNLKEEDFNKDMSEDNEGTVNELLQRGDNLQQRI  5740


>ref|XM_001379309.1| PREDICTED: Monodelphis domestica similar to T cell antigen receptor 
alpha chain VJC region (LOC100029652), mRNA
Length=11307

 Score = 2325 bits (6026),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1112/1216 (91%), Positives = 1165/1216 (95%), Gaps = 14/1216 (1%)
 Frame = +1

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
              MPSSL+LEVPALADFN+AWTELTDWLSLLD+VIK+QRVMVGDLEDIN+MIIKQKAT+QDL
Sbjct  7345   MPSSLLLEVPALADFNKAWTELTDWLSLLDRVIKTQRVMVGDLEDINDMIIKQKATLQDL  7524

Query  61     EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
              EQRRPQLEELITAAQNLKNKT NQEARTIITDRIE+IQ+QWDEVQEHLQ RRQQLNEMLK
Sbjct  7525   EQRRPQLEELITAAQNLKNKTGNQEARTIITDRIEKIQSQWDEVQEHLQRRRQQLNEMLK  7704

Query  121    DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              DS QWLEAK+EAE  L +A+ KLESWKE PYT++ I+K+ TETKQLAKDLRQWQ NVDVA
Sbjct  7705   DSAQWLEAKKEAEWTLEKAKTKLESWKEIPYTMEGIRKQSTETKQLAKDLRQWQINVDVA  7884

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              NDLA KLLRDYS DDTRKV MIT+NINA+W  I+KRV+EREAALE  HRLLQQFPLDLEK
Sbjct  7885   NDLARKLLRDYSTDDTRKVQMITDNINATWADINKRVNEREAALEAAHRLLQQFPLDLEK  8064

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              FLAWLTEAETTANVLQDAT KER+LED+KGV+ELMKQWQDLQGEIEAHTD++HNLDEN Q
Sbjct  8065   FLAWLTEAETTANVLQDATHKERILEDTKGVRELMKQWQDLQGEIEAHTDIFHNLDENGQ  8244

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
              KIL+SLEGSDDAVLL+RRLDNMNFKWSELRKKSLNIRSHLE SSDQWKRLHLSLQELLVW
Sbjct  8245   KILKSLEGSDDAVLLKRRLDNMNFKWSELRKKSLNIRSHLEVSSDQWKRLHLSLQELLVW  8424

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              LQLKDDELSRQAPIGGD+PAVQ+QND+HRAFKRELKTKEPVI STLETVRIFL+E+PLE 
Sbjct  8425   LQLKDDELSRQAPIGGDYPAVQQQNDIHRAFKRELKTKEPVITSTLETVRIFLSEKPLEE  8604

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              LEK YQEPRELPPEERA NVTRLLRKQA+EVN+EWEKLNLHS DWQ+KIDE L RLQ+LQ
Sbjct  8605   LEKHYQEPRELPPEERAHNVTRLLRKQADEVNSEWEKLNLHSVDWQKKIDEALGRLQDLQ  8784

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
              EA DELDLKLRQAEV++GSWQPVGDLLIDSLQ+HLEKVKALRGEIAPL+EN++HVN LAR
Sbjct  8785   EAMDELDLKLRQAEVMRGSWQPVGDLLIDSLQEHLEKVKALRGEIAPLEENINHVNGLAR  8964

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QLTT GIQLSPYNL++LEDLNTRWKLL VA+++R+RQLHEAHRDFGP SQHFLSTSVQGP
Sbjct  8965   QLTTSGIQLSPYNLNSLEDLNTRWKLLLVAIDERIRQLHEAHRDFGPTSQHFLSTSVQGP  9144

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  9145   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  9324

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  9325   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  9504

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTGRIRVLSFKTG+ISLCKAHLEDKYRYLFKQVASS GFCDQRRLGLLLHD
Sbjct  9505   WLLNVYDTGRTGRIRVLSFKTGVISLCKAHLEDKYRYLFKQVASSMGFCDQRRLGLLLHD  9684

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  9685   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  9864

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  9865   VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  10044

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
              TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET            
Sbjct  10045  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDS  10224

Query  949    -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
               PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN
Sbjct  10225  APASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  10404

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
              Q+SPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP
Sbjct  10405  QESPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  10584

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPEMMP SPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  10585  SPPEMMPISPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  10764

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLS-PPQDTSTGLEEV  1186
              QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTS++MGE+DLLS PPQDTSTGLEEV
Sbjct  10765  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSETMGEDDLLSPPPQDTSTGLEEV  10944

Query  1187   MEQLNNSFPSSRGHNV  1202
              MEQLNNSFPS+RG N 
Sbjct  10945  MEQLNNSFPSTRGRNA  10992


 Score = 60.8 bits (146),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 25/28 (89%), Positives = 28/28 (100%), Gaps = 0/28 (0%)
 Frame = +1

Query  1199   GHNVGSLFHMADDLGRAMESLVSVMTDE  1226
              GHNVG+LFHMADDLGRAME+LV+VMTDE
Sbjct  11212  GHNVGNLFHMADDLGRAMETLVTVMTDE  11295


 Score = 57.0 bits (136),  Expect = 7e-05, Method: Compositional matrix adjust.
 Identities = 119/543 (21%), Positives = 224/543 (41%), Gaps = 56/543 (10%)
 Frame = +1

Query  64    RPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKD--  121
             +PQ+E L   +  LK K   ++    +        N + +V   LQ R +QL   L    
Sbjct  2635  QPQVERLKIQSIALKEK---EQGPMFLDADFVAFTNHFKQVLSDLQAREKQLQTTLDSLP  2805

Query  122   STQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVAN  181
              T +LE        + Q+  KL   +      + +++++ E K L   L++ Q  +++  
Sbjct  2806  PTHYLEMVNTILMCIQQSETKLSIPQVTVTEYEIMEQRLRELKALQSSLQEQQPGLNLLT  2985

Query  182   DLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKF  241
                 ++ +    +  +K  +  E I   W+ +  ++ E    LEE    LQQF  D++  
Sbjct  2986  TTVEEMSKTAPPEINKKYQLELEGIQIRWKKLSSQLVEHCQKLEEHMTKLQQFQNDIKTL  3165

Query  242   LAWLTEAETTANVLQDATRKER--LLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENS  299
               W+ E         D   KE    L DS+ +++ ++Q   L  +I+       +++E  
Sbjct  3166  KKWMAEV--------DVFLKEEWPALGDSEALEKQLEQCTVLVNDIQTIHPSLVSVNEVG  3321

Query  300   QKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLV  359
             QKI    E    A  ++  L  +N +W  + +++   +  L+   D+   L   L E+  
Sbjct  3322  QKIQNEAE-PQFASKVKTELKELNAQWDHICQQARAKKEALKGGLDKTVSLRKDLSEMHE  3498

Query  360   WLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLE  419
             W+   ++E   +         +QK  D  ++ K E + KE  +    +++  F+   P  
Sbjct  3499  WITQAEEEYLERDFEYKTPEELQKAVDELKSAKEEAQQKEVKVKLLTDSMNNFIARAPPV  3678

Query  420   GLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQEL  479
               + L +E   L       N  RL  +    +N + + L    A W     E L  L+  
Sbjct  3679  AHDALKKELDTL-----ITNYQRLCSR----LNGKCKTLEEVWACWC----ELLSYLEAE  3819

Query  480   QEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLA  539
              +  +E+++KL+  E I G  + + ++L     D LE++      +    +N + + +LA
Sbjct  3820  NKWLNEVEIKLKATENIPGGAEEISEVL-----DSLERL------MRHPDDNRNQIRELA  3966

Query  540   RQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQG  599
             + LT  G+     N   LE  N+RW+ L    ++ VR+            Q FL  S+Q 
Sbjct  3967  QTLTDGGVLDELIN-EKLEKFNSRWEELH---QEAVRR------------QKFLEQSIQS  4098

Query  600   PWE  602
               E
Sbjct  4099  AQE  4107


 Score = 48.9 bits (115),  Expect = 0.018, Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 134/273 (49%), Gaps = 26/273 (9%)
 Frame = +1

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             LT+WL+  D  +  +  + G   +++  I   KAT +++E+R+PQL+ +     +LK   
Sbjct  4732  LTEWLAATDTELTKRSAVEGMPANLDAEIAWGKATQKEIEKRQPQLKIITDLGTSLKIVL  4911

Query  82    SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
               +E   ++ D++  +++ W  V     +R ++   +L +  + +E  +E         A
Sbjct  4912  GKKE--NLVDDKLSLLKSNWIAV----TSRAEEWLNLLLEYQKHMETFDE-------NVA  5052

Query  142   KLESW-KEGPYTVDAIQKKITETKQ-----LAKDLRQWQTNVDVANDLALKLLRDYSADD  195
              + +W       +D  +KK T+ K+     L  +L   +  VD  +D A+ L+ +   D 
Sbjct  5053  HITAWISHAEILLDESEKKKTQQKEDVLKCLKAELNDMRPKVDSTHDQAINLMTN-RGDH  5229

Query  196   TRKV-HMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANV  254
              RKV       +N  + +I +R+   +A++    + L+QF  D++K L  L EAE    V
Sbjct  5230  CRKVIEPKLSELNHRFAAISQRIKTGKASI--PLKELEQFNSDIQKLLEPL-EAEIQQGV  5400

Query  255   -LQDATRKERLLEDSKG-VKELMKQWQDLQGEI  285
              L++    + + ED++G VKEL+++   LQ  I
Sbjct  5401  NLKEEDFNKDMSEDNEGTVKELLQRGDTLQQRI  5499


 Score = 48.9 bits (115),  Expect = 0.020, Method: Compositional matrix adjust.
 Identities = 80/372 (21%), Positives = 161/372 (43%), Gaps = 45/372 (12%)
 Frame = +1

Query  7     LEVPA--LADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRR  64
             L VP+  LA+ +R    +T  +S  + ++ +  +   D ED+     KQ+  ++ ++   
Sbjct  5965  LYVPSTYLAEIHR----VTQNISEAEFLLNTPDLCAKDFEDL----FKQEECLKKVKDNL  6120

Query  65    PQLEELITAAQNLKNKTSNQEAR----TIITDRIERIQNQWDEVQEHLQNRRQQLNEM--  118
              ++   +    N K  T+ Q A     T I + + ++ +QW++V    ++R+ + +    
Sbjct  6121  QRISNQVEVIHN-KKTTALQNATPMEATKIKEALTQLNSQWEKVNNIYKDRQGRFDRSVE  6297

Query  119   --------LKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDL  170
                     +K   QWL    EAEQ L + +         P  +D  + +    K+L   +
Sbjct  6298  KWRRFHYDMKIFNQWLT---EAEQFLDKTK--------HPDNLDHAKYRWY-LKELQDGI  6441

Query  171   RQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRL  230
              + QT V        +++   S  D   +    + +N  W+ + ++++ER+  LEE   +
Sbjct  6442  NRQQTVVKELTVTGEEIIGQSSKGDASILEDKLDYLNVRWQEVCRQLAERKKRLEEQKNI  6621

Query  231   LQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTD  290
             L +F  DL +F+ WL EAE+  N   +   +++L    + VK  +++    QG       
Sbjct  6622  LSEFEGDLNEFILWLKEAESIVNTPLEPGNEQQLKNTLEKVKLRVEELPGRQG-------  6780

Query  291   VYHNLDENSQKILRSLEGSDDAV-LLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKR  349
             +   L+E   K L S   + + +  L+ R    N +W ++ K     +  +E     + +
Sbjct  6781  ILKQLNETGGKALISETINPEELDKLENRRKEANLQWIKISKDLPEKQKEIEVLLKNFVQ  6960

Query  350   LHLSLQELLVWL  361
                 L  L +WL
Sbjct  6961  FEEELHHLTLWL  6996


>emb|X13369.1| Chicken mRNA for dystrophin (Duchenne muscular dystrophy gene 
homolog)
Length=13575

 Score = 2182 bits (5654),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1038/1202 (86%), Positives = 1118/1202 (93%), Gaps = 9/1202 (0%)
 Frame = +1

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
              MPSS++LEVPALADFN+AW ELTDWLS LD+ IK+QRV VGDL+DIN+MIIKQKA MQDL
Sbjct  7522   MPSSVLLEVPALADFNKAWAELTDWLSRLDREIKAQRVTVGDLDDINDMIIKQKANMQDL  7701

Query  61     EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
              EQRRPQL+ELITAAQNLKNKTSNQEARTIITDRIE+IQ+QWD+V  +LQNRRQQL+EM K
Sbjct  7702   EQRRPQLDELITAAQNLKNKTSNQEARTIITDRIEKIQSQWDDVHGYLQNRRQQLHEMQK  7881

Query  121    DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              DSTQWLEAK+EAEQVL QA+AKLESWKE  YTV+A++K+ +E KQ +K++RQWQ N++  
Sbjct  7882   DSTQWLEAKQEAEQVLEQAKAKLESWKEISYTVEALKKQNSELKQFSKEIRQWQMNIEGV  8061

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              ND+ALK +RDYSADDTRKV ++T+NINA+W +I+KRVSEREAALE    +LQ+F LDLEK
Sbjct  8062   NDVALKPVRDYSADDTRKVELMTDNINATWATINKRVSEREAALESALLMLQEFYLDLEK  8241

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              FLAWLTEAETTANVLQDAT KE+ LED + V+ELMKQWQDLQ EI+AHTD++HNLDEN Q
Sbjct  8242   FLAWLTEAETTANVLQDATHKEKTLEDPQMVRELMKQWQDLQAEIDAHTDIFHNLDENGQ  8421

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
              KILRSLEGS+DAVLLQRRLDNMNF+WSELRKKSLNIRSHLEAS+DQWKRLHLSLQELL W
Sbjct  8422   KILRSLEGSEDAVLLQRRLDNMNFRWSELRKKSLNIRSHLEASTDQWKRLHLSLQELLAW  8601

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              LQLK+DEL +QAPIGGD P VQKQNDVHR FKRELKTKEPVIM+ LETVR+FL +QP+EG
Sbjct  8602   LQLKEDELKQQAPIGGDIPTVQKQNDVHRTFKRELKTKEPVIMNALETVRLFLADQPVEG  8781

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              LEK+Y EPR+L PEERAQNVT++LR+QA++V TEW+KLNL SADWQ+KID+ LERLQ LQ
Sbjct  8782   LEKVYPEPRDLSPEERAQNVTKVLRRQADDVRTEWDKLNLRSADWQKKIDDALERLQGLQ  8961

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
              EA DELDLKLRQAE  KGSWQPVGDLLIDSLQDHLEKVK  R E+ PLKE V  VN+LA 
Sbjct  8962   EAMDELDLKLRQAEAFKGSWQPVGDLLIDSLQDHLEKVKVYRAEMVPLKEKVHQVNELAH  9141

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              +     IQLSPY LS LEDLNTRWK+LQVA+++R+RQLHEAHRDFGP SQHFL+TSVQGP
Sbjct  9142   RFAPPDIQLSPYTLSCLEDLNTRWKVLQVAIDERIRQLHEAHRDFGPTSQHFLTTSVQGP  9321

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  9322   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  9501

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLL+LSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  9502   LDLLNLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  9681

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTGRIRVLSFKTG++SLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  9682   WLLNVYDTGRTGRIRVLSFKTGVVSLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  9861

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  9862   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  10041

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  10042  VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  10221

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDT  960
              TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETP +       D 
Sbjct  10222  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVD-  10398

Query  961    HSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQ  1020
                      S LAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQ+SPLSQPRSPAQ
Sbjct  10399  --------SALAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQESPLSQPRSPAQ  10554

Query  1021   ILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSP  1080
              ILISLESEERGELERILADLEEENRNLQAEYDRLKQQH+HKGLSPLPSPPEMMP SPQSP
Sbjct  10555  ILISLESEERGELERILADLEEENRNLQAEYDRLKQQHDHKGLSPLPSPPEMMPVSPQSP  10734

Query  1081   RDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSS  1140
              RDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQA+AKVNGTT+SS
Sbjct  10735  RDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQADAKVNGTTLSS  10914

Query  1141   PSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGH  1200
              PSTSLQRSDSSQPMLLRVVGSQTS++MGE+DLLSPPQDTSTGLEEVMEQLNNSFPSSRG 
Sbjct  10915  PSTSLQRSDSSQPMLLRVVGSQTSETMGEDDLLSPPQDTSTGLEEVMEQLNNSFPSSRGR  11094

Query  1201   NV  1202
              N 
Sbjct  11095  NA  11100


 Score = 62.4 bits (150),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 27/33 (81%), Positives = 31/33 (93%), Gaps = 0/33 (0%)
 Frame = +3

Query  1195   PSSRGHNVGSLFHMADDLGRAMESLVSVMTDEE  1227
               S RGHNVGSLFHMADDLGRAME+LV+VMTD++
Sbjct  11109  ASERGHNVGSLFHMADDLGRAMETLVTVMTDDK  11207


 Score = 53.5 bits (127),  Expect = 7e-04, Method: Compositional matrix adjust.
 Identities = 112/523 (21%), Positives = 218/523 (41%), Gaps = 43/523 (8%)
 Frame = +1

Query  64    RPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDST  123
             +PQ+E L   +Q LK K   ++    +   +    + + ++   +  R +QL  +  DS 
Sbjct  2806  QPQIERLKAQSQALKEK---EQCPVFLDADLAAFTSHFKQILADMHTREKQLQTIF-DSL  2973

Query  124   QWLEAKEEAEQVLG---QARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
                  K+    +L    Q+  K+          + +++++ E K L   L++ Q  +   
Sbjct  2974  PPARYKDTVTTILSWIQQSETKVSIPPVAVAEYEIMEQRLGELKALQSSLQEQQKGLKYL  3153

Query  181   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
             N     L R   A+ ++K     E I   W+ +  ++ E    LE+    LQ+F  D + 
Sbjct  3154  NTTVEDLSRKAPAEVSQKYRSEVELIVGRWKKLSSQLVEHCQKLEDLMTKLQRFQNDTKT  3333

Query  241   FLAWLTEAETTANVLQDATRKER--LLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDEN  298
                W+ E         D   KE    L DS+ +++ ++Q   L  +I+      ++++E 
Sbjct  3334  LKKWMAEV--------DVFLKEEWPALGDSEALEKQLEQCTALVNDIQTIQPSLNSVNEI  3489

Query  299   SQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELL  358
              +K+ R  E  + A  +   L ++N +W  + +++   ++ L+   D+   L   L E+ 
Sbjct  3490  GKKMKREAE-PEFASRIATELKDLNAQWEHICQQAHAKKAALKGGLDKTVSLRKDLSEMH  3666

Query  359   VWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPL  418
              W+   ++E   +         +QK  +  +  K +   KE  +    ++V  F+ + P 
Sbjct  3667  EWITQAEEEYLERDFEYKTPEELQKAVEELKRAKEDAMQKEVKVKLITDSVNNFIAKAPP  3846

Query  419   EGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQE  478
                E L +E   L      Q +   L  + + +   W       A W     E L  L  
Sbjct  3847  AANEALKKELDVLITS--YQRLCSRLNGKCKTLEEVW-------ACWH----ELLSYLDA  3987

Query  479   LQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDL  538
               +  +E++LKL+  E I+G  + + + L     D LE++      +   ++N + + +L
Sbjct  3988  ENKWLNEVELKLKATENIQGGAEEISESL-----DSLERL------MRHPEDNRNQIREL  4134

Query  539   ARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEA  581
             A+ LT  GI     N   LE  NTRW+ LQ     R + L ++
Sbjct  4135  AQTLTDGGILDELIN-EKLEKFNTRWEELQQEAVRRQKSLEQS  4260


 Score = 50.4 bits (119),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 159/347 (45%), Gaps = 43/347 (12%)
 Frame = +1

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             LT+WL+  D  +  +  + G   +++  I   KAT +++E+R+ QL+ +    +NLK   
Sbjct  4903  LTEWLAATDVELTKRSAVQGMPSNLDAEIAWGKATRKEIEKRQVQLKNICDLGENLKTVL  5082

Query  82    SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEE--AEQVLGQA  139
               +E  +++ D++  + + W  V     +R ++   +L +  + +EA ++  A       
Sbjct  5083  KGKE--SLVEDKLSLLNSNWIAV----TSRAEEWLNLLMEYQKHMEAFDQKVANVTTWIY  5244

Query  140   RAKL---ESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDT  196
             RA++   ES K+ P      Q+K    K+L  +L      VD   D A+ L+ +   D  
Sbjct  5245  RAEILLDESDKQKP------QQKEETLKRLKAELNDMHPKVDSVRDQAVDLMTN-RGDHC  5403

Query  197   RKV-HMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWL-TEAETTANV  254
             RKV       +N  + +I +R+   +  +    + L+QF  D++K L  L  E +   N+
Sbjct  5404  RKVIEPKLSELNHRFAAISQRIKSGKPFI--PLKELEQFDFDIQKLLEPLEVEIQQGVNL  5577

Query  255   LQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVL  314
              ++   K+   +D   VKEL+++   LQ  I          DE  ++ ++  +      L
Sbjct  5578  KEEDFNKDMSEDDESTVKELLQRGDTLQKRI---------TDERKREEIKIKQQ-----L  5715

Query  315   LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWL  361
             LQ + + +    S+ RKK+L I       S QW +      +L+ WL
Sbjct  5716  LQTKHNALKDLRSQRRKKALEI-------SHQWYQYKRQADDLMTWL  5835


 Score = 48.5 bits (114),  Expect = 0.023, Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 29/179 (16%)
 Frame = +1

Query  90    ITDRIERIQNQWDEVQEHLQNRRQQLNEM----------LKDSTQWLEAKEEAEQVLGQA  139
             I D++ ++ +QW++V +  ++R+ + ++           +K   +WL   EE       +
Sbjct  6376  IQDKLTQLNSQWEKVNKMYRDRQARFDKSKEKWRLFHCEMKSFNEWLTETEEK-----LS  6540

Query  140   RAKLESWKEGPYTVDAIQKKITETKQLAKDLR----QWQTNVDVANDLALKLLRDYSADD  195
             RA++E+   G            +TKQ  ++L+    + QT V   N    +++   SA D
Sbjct  6541  RAQIEAGDVGH----------VKTKQFLQELQDGIGRQQTVVKTLNVTGEEIIEQSSAAD  6690

Query  196   TRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANV  254
                +     N+N  W+ I +++ E+   +EE   +L +F  DL K + WL E E    +
Sbjct  6691  ANVLKEQLGNLNTRWQEICRQLVEKRKRIEEEKNILSEFQEDLNKLILWLEETENVIAI  6867


 Score = 40.4 bits (93),  Expect = 6.5, Method: Compositional matrix adjust.
 Identities = 78/362 (21%), Positives = 144/362 (39%), Gaps = 45/362 (12%)
 Frame = +1

Query  231   LQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTD  290
             L  +   LE+ L WL  AE       D +       D + VKE     +    E+ AH  
Sbjct  1177  LDSYQTALEEVLTWLLSAEDALQAQGDIS------SDVEVVKEQFHTHEGFMMELTAHQG  1338

Query  291   VYHNLDENSQKILRSLEGSDDAV-LLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKR  349
                N+ +   ++L   + SDD    +Q +++ +N +W  LR  S+  +S+L        +
Sbjct  1339  RVGNVLQVGSQLLAMGKLSDDEENEIQEQMNLLNSRWESLRVASMEKQSNLH-------K  1497

Query  350   LHLSLQ-----ELLVWLQLKDDELSRQA---PIGGDFPAVQKQNDVHRAFKRELKTKEPV  401
             + + LQ     +L  WL  K +E +++    P+G D   +++Q + H+AF+ +L+ ++  
Sbjct  1498  ILMDLQNQQLAQLADWL-TKTEERTKKIDSEPLGPDLEDLKRQVEEHKAFQDDLEQEQVK  1674

Query  402   IMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLH  461
             + S    V +                      E      T  L +Q +   + W  +   
Sbjct  1675  VNSLTHMVVVV--------------------DENSGDKATAALEEQLQHFGSRWAAICRW  1794

Query  462   SADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKAL  521
             + D    + + L + Q   E     D  L + E      Q       + +   L K+  L
Sbjct  1795  TEDRWVLLQDILRKWQHFAEEQCLFDAWLTEKEGSLSKIQTSDFKDENEMLTSLRKLAIL  1974

Query  522   RGEIAPLKENVSHVNDLARQL--TTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLH  579
             +G+I   K+ +S +  L+R L        ++    S LE+   RW  L   +E   +Q+ 
Sbjct  1975  KGDIEMKKQMMSKLKSLSRDLLVAVKNKAVAQKLESRLENFAQRWDSLVQKLESDSKQVS  2154

Query  580   EA  581
             +A
Sbjct  2155  QA  2160


>ref|XM_002191629.1| PREDICTED: Taeniopygia guttata dystrophin (LOC100228890), mRNA
Length=11801

 Score = 2078 bits (5384),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1004/1202 (83%), Positives = 1084/1202 (90%), Gaps = 37/1202 (3%)
 Frame = +1

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
              MPSS++LEVPALADFN+AW ELTDWLS LD+ IKSQRV VGDL+DIN+MIIKQKA +QDL
Sbjct  7402   MPSSVLLEVPALADFNKAWAELTDWLSRLDREIKSQRVKVGDLDDINDMIIKQKAILQDL  7581

Query  61     EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
              EQRRPQL+ELITAAQNLKNKTSNQEARTIITDRIE+IQ+QWDEV  +LQ+RRQQL EMLK
Sbjct  7582   EQRRPQLDELITAAQNLKNKTSNQEARTIITDRIEKIQSQWDEVHGYLQSRRQQLQEMLK  7761

Query  121    DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              DSTQWLEAK EAEQVL QA+AKLESWKE  YTV+A++K+ TE KQ +K++RQWQ NVDVA
Sbjct  7762   DSTQWLEAKREAEQVLEQAKAKLESWKEISYTVEALKKQNTELKQFSKEIRQWQINVDVA  7941

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              ND+ALKLLRDYSADDTRKV ++T++INASW +I+KRV EREAALE   R+LQQF LDLEK
Sbjct  7942   NDMALKLLRDYSADDTRKVQLMTDSINASWAAINKRVCEREAALESALRMLQQFYLDLEK  8121

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              FLAWLTEAETTANVLQDAT KE+ LED+K V++LMKQWQ+LQ EI+AHTD++H+LDEN Q
Sbjct  8122   FLAWLTEAETTANVLQDATHKEKTLEDAKMVRDLMKQWQELQAEIDAHTDIFHSLDENGQ  8301

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
              KILRSLEGS+DA LLQRRLDNMN +WSELRKKSLNIRSHLEAS+DQWKRLHLSLQELL W
Sbjct  8302   KILRSLEGSEDATLLQRRLDNMNLRWSELRKKSLNIRSHLEASTDQWKRLHLSLQELLAW  8481

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              LQLK+DEL +QAPIGGD P VQKQND+HR FKRELKTKEPVI S LETVRIF+ EQP+E 
Sbjct  8482   LQLKEDELKQQAPIGGDLPTVQKQNDIHRTFKRELKTKEPVIRSALETVRIFVAEQPVEA  8661

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              +EK+  EPR+L PEERA N+T+LL++QA+EV TEW+KLNL SADWQ+KID+ LERLQ LQ
Sbjct  8662   VEKVCPEPRDLSPEERAHNITKLLQRQADEVRTEWDKLNLQSADWQKKIDDALERLQGLQ  8841

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
              EA DELDLKLRQAE  KGSWQPVGDLLIDSLQDHLEKVK  R E+ PLKE V HVN+LA 
Sbjct  8842   EAMDELDLKLRQAEAFKGSWQPVGDLLIDSLQDHLEKVKVYRAELVPLKEKVHHVNELAH  9021

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              + T   IQLS YNLS +EDLNTRWK+LQVAV++R++QLHEAHRDFGP SQHFL+TSVQGP
Sbjct  9022   RFTPPDIQLSQYNLSCVEDLNTRWKVLQVAVDERIKQLHEAHRDFGPTSQHFLTTSVQGP  9201

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  9202   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  9381

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  9382   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  9561

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTGRIRVLSFKTG++SLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  9562   WLLNVYDTGRTGRIRVLSFKTGVVSLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  9741

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  9742   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  9921

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPIIGFRYR                            +  + 
Sbjct  9922   VAAAETAKHQAKCNICKECPIIGFRYR----------------------------LSPFQ  10017

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDT  960
              T TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETP +       D 
Sbjct  10018  TRTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVD-  10194

Query  961    HSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQ  1020
                      S LAEMEN+NGSYLNDSISPNESIDDEHLLIQHYCQSLNQ+SPLSQP+SPAQ
Sbjct  10195  --------SALAEMENTNGSYLNDSISPNESIDDEHLLIQHYCQSLNQESPLSQPQSPAQ  10350

Query  1021   ILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSP  1080
              ILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMP SPQSP
Sbjct  10351  ILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPVSPQSP  10530

Query  1081   RDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSS  1140
              RDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQA+AKVNGTT+SS
Sbjct  10531  RDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQADAKVNGTTLSS  10710

Query  1141   PSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGH  1200
              PSTSLQRS SSQPMLLRVVGSQTS++MGE++LLSPPQDTSTGLEEVMEQLNNSFPSSRG 
Sbjct  10711  PSTSLQRSGSSQPMLLRVVGSQTSETMGEDELLSPPQDTSTGLEEVMEQLNNSFPSSRGR  10890

Query  1201   NV  1202
              N 
Sbjct  10891  NA  10896


 Score = 62.8 bits (151),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 27/32 (84%), Positives = 31/32 (96%), Gaps = 0/32 (0%)
 Frame = +3

Query  1196   SSRGHNVGSLFHMADDLGRAMESLVSVMTDEE  1227
              S RGHNVGSLFHMADDLGRAME+LV+VMTD++
Sbjct  10908  SERGHNVGSLFHMADDLGRAMETLVTVMTDDK  11003


 Score = 57.0 bits (136),  Expect = 7e-05, Method: Compositional matrix adjust.
 Identities = 116/529 (21%), Positives = 228/529 (43%), Gaps = 55/529 (10%)
 Frame = +1

Query  64    RPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDST  123
             +PQ+E L   +Q LK K   ++A   +   +    + + ++   +  R +QL  +  DS 
Sbjct  2686  QPQIERLKAQSQALKEK---EQAPVFLDADLAAFTSHFKQIFADMHAREKQLQTIF-DSL  2853

Query  124   QWLEAKEEAEQVL---GQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
                  KE    +L    Q+  KL + +      + +++++ E K L   L++ Q  +   
Sbjct  2854  PPAHYKETMNTILVWMQQSETKLSTPQVAIAEYEIMEQRLREFKALQSSLQEQQKGLTYL  3033

Query  181   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
             +     L R    + ++      E +   W+ +  +++E    LEE    LQ+F  D   
Sbjct  3034  STTVEDLSRKAPTEVSQSYRSEVEVVLGRWKKLSAQLAEHCQRLEERMTKLQRFQNDTRT  3213

Query  241   FLAWLTEAETTANVLQDATRKER--LLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDEN  298
                W+ E         D   KE    L DS+ +++ ++Q   L  +I+      ++++E 
Sbjct  3214  LKKWMAEV--------DVFLKEEWPALGDSEALEKQLEQCTALVNDIQTIQPSLNSVNET  3369

Query  299   SQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELL  358
              +K ++S    + A  ++  L ++N +W  + +++   ++ L+   D+   L   L E+ 
Sbjct  3370  GKK-MKSEAEPEFASRIESELKDLNAQWDHICQQAYAKKAALKGGLDKTVSLRKDLSEMH  3546

Query  359   VWL-QLKDDELSRQAPIGGDFP-----AVQKQNDVHRAFKRELKTKEPVIMSTLETVRIF  412
              W+ Q +++ L R      DF       +QK  +  +  K E   KE  +    ++V  F
Sbjct  3547  EWITQAEEEYLER------DFEYKTPDELQKAVEELKRAKEEALQKEVKVKLITDSVNNF  3708

Query  413   LTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDET  472
             + + P    E L +E   L    + Q  +RL        N +W+ L    A W+    E 
Sbjct  3709  IAKAPPAAHEALKKELDVLITSYQ-QLCSRL--------NGKWKTLEEVWACWR----EL  3849

Query  473   LERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENV  532
             L  L    +  +E+++KL+  E ++G  + + + L     D LE++      +   ++N 
Sbjct  3850  LSYLDAENKWLNEIEMKLKATENVQGGAEEISECL-----DSLERL------MRHPEDNR  3996

Query  533   SHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEA  581
             + + +LA+ LT  GI     N   LE  N+RW+ LQ     R + L ++
Sbjct  3997  NQIRELAQTLTDGGILDELIN-EKLEKFNSRWEELQQEAVRRQKSLEQS  4140


 Score = 55.1 bits (131),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 159/348 (45%), Gaps = 52/348 (14%)
 Frame = +1

Query  273   ELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKK  332
             E +K  +D  G ++ H ++ +N    + + +   E ++    +Q +L  +NF+W +L K 
Sbjct  6142  ECLKSIKDSLGRLQGHVEIVNNKKTAALQNVTPKEAAN----IQEKLTQLNFEWEKLNKM  6309

Query  333   SLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFK  392
               + ++  + S ++W+  H  ++    WL   +++LSR     GD   V+      + F 
Sbjct  6310  YRDRQARFDKSLEKWQIFHSDMKRFNHWLNETEEKLSRAQIEAGDVGLVKT-----KQFI  6474

Query  393   RELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVN  452
             +EL+         +   + F+      G E +         E+ ++   ++L++Q E +N
Sbjct  6475  QELQ-------DGIGQQQTFVKTLNATGEEII---------EQSSKADAKVLKEQLESLN  6606

Query  453   TEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQ  512
               W+++     + +++I+E    L E QE  ++L L L +A+ I     P+ +   D L+
Sbjct  6607  NRWKEICRQLVEKKKRIEEEKNILSEFQEDLNKLILWLEEADNIICI--PLEEGNEDQLR  6780

Query  513   DHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNL---------STLEDLNTR  563
             D L KVK   GE+ P K  +  +N+      T GI L   +L         STL++ N R
Sbjct  6781  DCLSKVKLRVGELPPHKGILKRLNE------TGGIALGSASLNPDKKHKLESTLKEANHR  6942

Query  564   WKLLQVA--VEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNK  609
               LL+V+  + D+ +++    +DF    Q         PW   I+P K
Sbjct  6943  --LLKVSKDLPDKQKEIEILLKDFVELDQQLNQVI---PW---ITPVK  7062


 Score = 48.1 bits (113),  Expect = 0.033, Method: Compositional matrix adjust.
 Identities = 91/389 (23%), Positives = 171/389 (43%), Gaps = 53/389 (13%)
 Frame = +1

Query  22    LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             LT+WL+  D  +  +  + G   +++  I   KAT +++E+R+ QL+ +    +NLK   
Sbjct  4783  LTEWLAATDAELTKRSAVQGMPRNLDAEIAWGKATRKEIEKRQVQLKSISDLGENLKAVM  4962

Query  82    SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEE--AEQVLGQA  139
               +E  +++ D++  + + W  V     +R ++   +L +  + +EA ++  A       
Sbjct  4963  KGKE--SLVDDKLSLLNSNWKAV----TSRAEEWFNLLLEYQKHMEAFDQNVANVTTWMY  5124

Query  140   RAKL---ESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDT  196
             RA++   ES K+ P      Q+K    K+L  +L      VD   D A  L+ +      
Sbjct  5125  RAEILLDESDKQKP------QQKEEILKRLKAELNDIHPKVDSVRDQARDLMANRGEHCR  5286

Query  197   RKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWL-TEAETTANVL  255
             + V      +N    +I +R+   +  +    + L+QF  D++K L  L  E +   N+ 
Sbjct  5287  KVVEPKLSELNQRLAAISQRIKSVKPFI--PLKELEQFDFDIQKMLEPLEVEIQQGVNLK  5460

Query  256   QDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLD-ENSQKILRSLEGSDDAVL  314
             ++   K+   ED   VKEL+++   LQ  +   TD     + +  Q++LR+   +   + 
Sbjct  5461  EEDFNKDMSEEDESTVKELLQRGDRLQKGV---TDEKKREEIKTKQQLLRTKHNALKDLR  5631

Query  315   LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELS-----  369
              QR            RKK+L I       S QW +      +L+ WL   + +L+     
Sbjct  5632  AQR------------RKKALEI-------SHQWYQYKRQADDLMTWLDDIEKKLAGLPDH  5754

Query  370   ----RQAPIGGDFPAVQKQ-NDVHRAFKR  393
                 +   IGG+    ++  N VHR  +R
Sbjct  5755  KDEQKLKEIGGELEKKKEDLNAVHRQAER  5841


 Score = 39.7 bits (91),  Expect = 9.4, Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 94/194 (48%), Gaps = 24/194 (12%)
 Frame = +1

Query  231   LQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTD  290
             L+ +   LE+ L WL  AE       D +       D + VKE     +    E+ AH  
Sbjct  1057  LENYQTALEEVLTWLLSAEDALQAQGDISN------DVEVVKEQFHTHEGFMMELTAHQG  1218

Query  291   VYHNLDENSQKILRSLEGSDDAV-LLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKR  349
                N+ +   ++L + + SD+    +Q +++ +N +W  LR  S+  +S+L        +
Sbjct  1219  RVGNVLQVGSQLLSTGKLSDEEENEIQEQMNLLNSRWESLRVASMEKQSNLH-------K  1377

Query  350   LHLSLQ-----ELLVWLQLKDDELSRQA---PIGGDFPAVQKQNDVHRAFKRELKTKEPV  401
             + + LQ     +L  WL  K +E +++    P+G D   +++Q + H+AF+ +L+ +E V
Sbjct  1378  ILMDLQNQQLAQLADWL-TKTEERTKKTDLEPLGPDLEDLKRQIEEHKAFQEDLE-QEQV  1551

Query  402   IMSTLETVRIFLTE  415
              +++L  + + + E
Sbjct  1552  KVNSLTHMVVVVDE  1593


>ref|NM_004023.2| Homo sapiens dystrophin (DMD), transcript variant Dp140bc, mRNA
Length=7048

 Score = 1975 bits (5116),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 972/1060 (91%), Positives = 989/1060 (93%), Gaps = 39/1060 (3%)
 Frame = +1

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  1042  MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  1221

Query  61    EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
             EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  1222  EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  1401

Query  121   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
             DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA
Sbjct  1402  DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  1581

Query  181   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
             NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK
Sbjct  1582  NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  1761

Query  241   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
             FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ
Sbjct  1762  FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  1941

Query  301   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
             KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  1942  KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  2121

Query  361   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
             LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  2122  LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  2301

Query  421   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
             LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ
Sbjct  2302  LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  2481

Query  481   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
             EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR
Sbjct  2482  EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  2661

Query  541   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
             QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  2662  QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  2841

Query  601   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
             WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  2842  WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  3021

Query  661   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
             LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  3022  LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  3201

Query  721   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
             WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  3202  WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  3381

Query  781   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
             SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  3382  SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  3561

Query  841   VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
             VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  3562  VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  3741

Query  901   TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDT  960
             TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET   + Q  +D  
Sbjct  3742  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET---NLQAEYDRL  3912

Query  961   HSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQ  1020
               + EH               L+   SP E +                  P S P+SP  
Sbjct  3913  KQQHEHKG-------------LSPLPSPPEMM------------------PTS-PQSPRD  3996

Query  1021  ILISLES----EERGELERILADLEEENRNLQAEYDRLKQ  1056
               +  E+    + +G LE  +  LE+ N+ L+++  RL+Q
Sbjct  3997  AELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQ  4116


 Score =  375 bits (964),  Expect = 6e-101, Method: Compositional matrix adjust.
 Identities = 185/185 (100%), Positives = 185/185 (100%), Gaps = 0/185 (0%)
 Frame = +1

Query  1046  NLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQI  1105
             NLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQI
Sbjct  3886  NLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQI  4065

Query  1106  LEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSD  1165
             LEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSD
Sbjct  4066  LEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSD  4245

Query  1166  SMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGRAMESLVSVMTD  1225
             SMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGRAMESLVSVMTD
Sbjct  4246  SMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGRAMESLVSVMTD  4425

Query  1226  EEGAE  1230
             EEGAE
Sbjct  4426  EEGAE  4440


 Score = 55.5 bits (132),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
 Frame = +1

Query  164  KQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAA  223
            K+L   + Q QT V   N    ++++  S  D   +     ++N  W+ + K++S+R+  
Sbjct  97   KELQDGIGQRQTVVRTLNATGEEIIQQSSKTDASILQEKLGSLNLRWQEVCKQLSDRKKR  276

Query  224  LEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQG  283
            LEE   +L +F  DL +F+ WL EA+  A++  +  ++++L E  + VK L+++    QG
Sbjct  277  LEEQKNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVEELPLRQG  456

Query  284  EIEAHTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEA  342
                   +   L+E    +L S   S ++   L+ +L   N +W ++ +     +  +EA
Sbjct  457  -------ILKQLNETGGPVLVSAPISPEEQDKLENKLKQTNLQWIKVSRALPEKQGEIEA  615

Query  343  SSDQWKRLHLSLQE-------LLVWL  361
                  +L   L++       LL+WL
Sbjct  616  QIKDLGQLEKKLEDLEEQLNHLLLWL  693


>ref|NM_004020.2| Homo sapiens dystrophin (DMD), transcript variant Dp140c, mRNA
Length=7050

 Score = 1955 bits (5065),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 938/940 (99%), Positives = 939/940 (99%), Gaps = 0/940 (0%)
 Frame = +1

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  1042  MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  1221

Query  61    EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
             EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  1222  EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  1401

Query  121   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
             DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA
Sbjct  1402  DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  1581

Query  181   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
             NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK
Sbjct  1582  NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  1761

Query  241   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
             FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ
Sbjct  1762  FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  1941

Query  301   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
             KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  1942  KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  2121

Query  361   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
             LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  2122  LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  2301

Query  421   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
             LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ
Sbjct  2302  LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  2481

Query  481   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
             EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR
Sbjct  2482  EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  2661

Query  541   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
             QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP
Sbjct  2662  QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  2841

Query  601   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
             WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  2842  WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  3021

Query  661   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
             LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  3022  LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  3201

Query  721   WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
             WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD
Sbjct  3202  WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  3381

Query  781   SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
             SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR
Sbjct  3382  SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  3561

Query  841   VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
             VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC
Sbjct  3562  VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  3741

Query  901   TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTV  940
             TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQ +
Sbjct  3742  TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQNL  3861


 Score =  314 bits (804),  Expect(2) = 4e-97, Method: Compositional matrix adjust.
 Identities = 155/158 (98%), Positives = 156/158 (98%), Gaps = 0/158 (0%)
 Frame = +1

Query  1045  RNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQ  1104
             +NLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQ
Sbjct  3853  QNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQ  4032

Query  1105  ILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTS  1164
             ILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTS
Sbjct  4033  ILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTS  4212

Query  1165  DSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
             DSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG N 
Sbjct  4213  DSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGRNT  4326


 Score = 71.6 bits (174),  Expect(2) = 4e-97, Method: Compositional matrix adjust.
 Identities = 33/33 (100%), Positives = 33/33 (100%), Gaps = 0/33 (0%)
 Frame = +3

Query  1198  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  4344  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  4442


 Score = 55.1 bits (131),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
 Frame = +1

Query  164  KQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAA  223
            K+L   + Q QT V   N    ++++  S  D   +     ++N  W+ + K++S+R+  
Sbjct  97   KELQDGIGQRQTVVRTLNATGEEIIQQSSKTDASILQEKLGSLNLRWQEVCKQLSDRKKR  276

Query  224  LEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQG  283
            LEE   +L +F  DL +F+ WL EA+  A++  +  ++++L E  + VK L+++    QG
Sbjct  277  LEEQKNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVEELPLRQG  456

Query  284  EIEAHTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEA  342
                   +   L+E    +L S   S ++   L+ +L   N +W ++ +     +  +EA
Sbjct  457  -------ILKQLNETGGPVLVSAPISPEEQDKLENKLKQTNLQWIKVSRALPEKQGEIEA  615

Query  343  SSDQWKRLHLSLQE-------LLVWL  361
                  +L   L++       LL+WL
Sbjct  616  QIKDLGQLEKKLEDLEEQLNHLLLWL  693


>ref|NM_004014.2| Homo sapiens dystrophin (DMD), transcript variant Dp116, mRNA
Length=5623

 Score = 1905 bits (4934),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 921/937 (98%), Positives = 922/937 (98%), Gaps = 13/937 (1%)
 Frame = +2

Query  279   QDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRS  338
             +DLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRS
Sbjct  89    KDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRS  268

Query  339   HLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTK  398
             HLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTK
Sbjct  269   HLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTK  448

Query  399   EPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKL  458
             EPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKL
Sbjct  449   EPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKL  628

Query  459   NLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKV  518
             NLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKV
Sbjct  629   NLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKV  808

Query  519   KALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQL  578
             KALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQL
Sbjct  809   KALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQL  988

Query  579   HEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADL  638
             HEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADL
Sbjct  989   HEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADL  1168

Query  639   NNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIY  698
             NNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIY
Sbjct  1169  NNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIY  1348

Query  699   DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYL  758
             DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYL
Sbjct  1349  DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYL  1528

Query  759   FKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEA  818
             FKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEA
Sbjct  1529  FKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEA  1708

Query  819   ALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQ  878
             ALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQ
Sbjct  1709  ALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQ  1888

Query  879   SCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQ  938
             SCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQ
Sbjct  1889  SCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQ  2068

Query  939   TVLEGDNMET-------------PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDS  985
             TVLEGDNMET             PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDS
Sbjct  2069  TVLEGDNMETPVTLINFWPVDSAPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDS  2248

Query  986   ISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  1045
             ISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR
Sbjct  2249  ISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  2428

Query  1046  NLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQI  1105
             NLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQI
Sbjct  2429  NLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQI  2608

Query  1106  LEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSD  1165
             LEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSD
Sbjct  2609  LEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSD  2788

Query  1166  SMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
             SMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG N 
Sbjct  2789  SMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGRNT  2899


 Score = 71.6 bits (174),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/33 (100%), Positives = 33/33 (100%), Gaps = 0/33 (0%)
 Frame = +1

Query  1198  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  2917  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  3015


>ref|XM_001096400.1| PREDICTED: Macaca mulatta similar to dystrophin Dp140b isoform 
(LOC707966), partial mRNA
Length=3242

 Score = 1707 bits (4420),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 820/854 (96%), Positives = 831/854 (97%), Gaps = 13/854 (1%)
 Frame = +1

Query  390   AFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAE  449
             AFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAE
Sbjct  1     AFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAE  180

Query  450   EVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLID  509
             EVNTEWEKLNLHS DWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLID
Sbjct  181   EVNTEWEKLNLHSTDWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLID  360

Query  510   SLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQV  569
             SLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQV
Sbjct  361   SLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQV  540

Query  570   AVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMT  629
             AVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMT
Sbjct  541   AVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMT  720

Query  630   ELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQ  689
             ELYQSL  L+++++S  R  ++LR L  +LC+DLLSLSAACDALDQHNLKQNDQPMDILQ
Sbjct  721   ELYQSLGFLHSIKYSLLRMLLELRALSSSLCMDLLSLSAACDALDQHNLKQNDQPMDILQ  900

Query  690   IINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKA  749
             IINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKA
Sbjct  901   IINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKA  1080

Query  750   HLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQF  809
             HLEDKYRYLFKQV+SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQF
Sbjct  1081  HLEDKYRYLFKQVSSSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQF  1260

Query  810   ANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  869
             ANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL
Sbjct  1261  ANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  1440

Query  870   KHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKH  929
             KHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKH
Sbjct  1441  KHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKH  1620

Query  930   PRMGYLPVQTVLEGDNMET-------------PASSPQLSHDDTHSRIEHYASRLAEMEN  976
             PRMGYLPVQTVLEGDNMET             PASSPQLSHDDTHSRIEHYASRLAEMEN
Sbjct  1621  PRMGYLPVQTVLEGDNMETPVTLINFWPVDSAPASSPQLSHDDTHSRIEHYASRLAEMEN  1800

Query  977   SNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERI  1036
             SNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERI
Sbjct  1801  SNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERI  1980

Query  1037  LADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHK  1096
             LADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHK
Sbjct  1981  LADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHK  2160

Query  1097  GRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLL  1156
             GRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLL
Sbjct  2161  GRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLL  2340

Query  1157  RVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGRAM  1216
             RVVGSQTSDSMGEED+LSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGRAM
Sbjct  2341  RVVGSQTSDSMGEEDVLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGRAM  2520

Query  1217  ESLVSVMTDEEGAE  1230
             ESLVSVMTDEEGAE
Sbjct  2521  ESLVSVMTDEEGAE  2562


>gb|AF339031.1|AF339031 Danio rerio dystrophin (dmd) mRNA, partial cds, alternatively 
spliced
Length=3521

 Score = 1583 bits (4099),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 768/1119 (68%), Positives = 910/1119 (81%), Gaps = 44/1119 (3%)
 Frame = +2

Query  96    RIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDA  155
             R    W++    L  R   L  M KDS+ WLEA++  E ++ +A  KLESWK+  ++V+ 
Sbjct  2     RFCRHWEDSHAKLTARVLTLQNMYKDSSDWLEARKRVEPLIKKANEKLESWKKVSHSVED  181

Query  156   IQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHK  215
             ++ +  + KQL+KDL+QWQT ++V N+LA KLL  Y+ DDT KV  +TE++N +W +I K
Sbjct  182   LKGQNADVKQLSKDLQQWQTQMNVTNELANKLLTLYADDDTSKVKQMTESMNLAWANIKK  361

Query  216   RVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELM  275
             R  ++EA LE   R LQ + LDLEKFL WLTEAETTANVLQDAT KE LLE+   V+ L+
Sbjct  362   RAGDKEADLEAGLRQLQHYYLDLEKFLNWLTEAETTANVLQDATFKEGLLENPATVRHLL  541

Query  276   KQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLN  335
             +QWQDLQ EI+AH + YH+LDEN  +I+ SLEG+D+AV+LQ+RLD+M  +W EL  K ++
Sbjct  542   EQWQDLQAEIDAHRETYHSLDENGHRIVSSLEGTDNAVVLQKRLDDMGQRWHELCNKVMS  721

Query  336   IRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKREL  395
             IR +L+A  DQWK LH+SLQELL WLQLK +EL +Q P+GGD P V +Q   H+AF+REL
Sbjct  722   IRPYLDAGVDQWKHLHMSLQELLNWLQLKREELEKQKPVGGDVPTVHQQLLTHKAFRREL  901

Query  396   KTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEP--RELPPEERAQNVTRLLRKQAEEVNT  453
               KEPVI  TL+  + FL E P EGL+   Q P  +++ PEER QNV R+LRK+ E+V  
Sbjct  902   GAKEPVINGTLDNAKTFLAEMPREGLK---QRPGQKDVSPEERVQNVGRILRKEVEDVTV  1072

Query  454   EWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQD  513
              W+ L   S DWQ++++  LERL ELQ+A D+LD KLRQAE +K SW+PVG+LL+D LQ+
Sbjct  1073  RWKNLGAASVDWQQQLELALERLMELQDAQDQLDYKLRQAESVKNSWKPVGELLVDDLQN  1252

Query  514   HLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVED  573
             H+++VKA + EIAP+++NV+HVN LA       IQLSP NLS ++DLN RW+LLQ+++E+
Sbjct  1253  HIDRVKAFQEEIAPIQDNVNHVNQLASTFRPSDIQLSPDNLSRIDDLNMRWRLLQISIEE  1432

Query  574   RVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQ  633
              + QL  A +D GP SQ+FL  SV+ P ER+ISPN VPYYINH+TQTTCWDHPKM ELYQ
Sbjct  1433  HLSQLTTAFKDLGP-SQNFLHASVESPLERSISPNNVPYYINHQTQTTCWDHPKMAELYQ  1609

Query  634   SLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINC  693
             SLADLNNVRFSAYRTAMKLRR+QKALCLDLLS+ AAC+A +QHNLKQN+Q MDI+Q+INC
Sbjct  1610  SLADLNNVRFSAYRTAMKLRRMQKALCLDLLSMPAACEAFEQHNLKQNEQFMDIVQVINC  1789

Query  694   LTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLED  753
             LT+IYDRLEQ+H++LVNVPLCVDMCLNWLLNVYDTGR G+IR LSFKTGIISLCKAHLED
Sbjct  1790  LTSIYDRLEQQHSSLVNVPLCVDMCLNWLLNVYDTGRAGKIRTLSFKTGIISLCKAHLED  1969

Query  754   KYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNK  813
             KYR+LF++VAS+TGFCDQRRLGLLLHD+IQIPRQLGEVASFGGSNIEPSVRSCFQFANNK
Sbjct  1970  KYRFLFREVASATGFCDQRRLGLLLHDAIQIPRQLGEVASFGGSNIEPSVRSCFQFANNK  2149

Query  814   PEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFN  873
             PE+EA++FLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFN
Sbjct  2150  PELEASVFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFN  2329

Query  874   YDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMG  933
             YDICQSCFFSGRVAKGHKM YPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMG
Sbjct  2330  YDICQSCFFSGRVAKGHKMQYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMG  2509

Query  934   YLPVQTVLEGDNMET-------------PASSPQLSHDDTHSRIEHYASRLAEMENSNGS  980
             YLPVQT+LEGDNMET             PASSPQLSHDDTHSRIEHYASR          
Sbjct  2510  YLPVQTILEGDNMETPVTLINFWPVDHPPASSPQLSHDDTHSRIEHYASR----------  2659

Query  981   YLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADL  1040
                         DDEHLLIQHYCQSLNQ SPLSQP+SPAQILIS+E+EE+GELER+L DL
Sbjct  2660  ------------DDEHLLIQHYCQSLNQGSPLSQPQSPAQILISMETEEKGELERVLNDL  2803

Query  1041  EEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLE  1100
             E+ENR LQAEYDRLK+ H+HKGLSPLPSPP+M+P SPQSPRDAELIAEAKLLRQHKGRLE
Sbjct  2804  EQENRKLQAEYDRLKKAHDHKGLSPLPSPPQMLPVSPQSPRDAELIAEAKLLRQHKGRLE  2983

Query  1101  ARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVG  1160
             ARMQILEDHNKQLESQL RLRQLLE  Q E+KVNGT +SSPST+  RSD+S    LRV  
Sbjct  2984  ARMQILEDHNKQLESQLTRLRQLLE--QTESKVNGTALSSPSTASPRSDTSLAS-LRVAA  3154

Query  1161  SQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG  1199
             SQT+++MG+++L SP QD STGLE+V+EQLNNSFP S+G
Sbjct  3155  SQTTETMGDDELSSPTQDASTGLEDVIEQLNNSFPHSQG  3271


 Score = 50.1 bits (118),  Expect = 0.007, Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 27/32 (84%), Gaps = 0/32 (0%)
 Frame = +1

Query  1196  SSRGHNVGSLFHMADDLGRAMESLVSVMTDEE  1227
             S RG NVGSLFHM D++G AMESLV V+T+E+
Sbjct  3286  SMRGPNVGSLFHMVDNIGHAMESLVHVITEEQ  3381


 Score = 43.9 bits (102),  Expect = 0.51, Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 101/232 (43%), Gaps = 30/232 (12%)
 Frame = +2

Query  21    ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA------  74
             EL +WL L  + ++ Q+ + GD+  +++ ++  KA  ++L  + P +   +  A      
Sbjct  782   ELLNWLQLKREELEKQKPVGGDVPTVHQQLLTHKAFRRELGAKEPVINGTLDNAKTFLAE  961

Query  75    ---QNLKNKTSN---------QEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDS  122
                + LK +            Q    I+   +E +  +W  +     + +QQL   L+  
Sbjct  962   MPREGLKQRPGQKDVSPEERVQNVGRILRKEVEDVTVRWKNLGAASVDWQQQLELALERL  1141

Query  123   TQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVAN  181
              +  +A+++ +  L QA +   SWK  G   VD +Q  I   K   +++   Q NV+  N
Sbjct  1142  MELQDAQDQLDYKLRQAESVKNSWKPVGELLVDDLQNHIDRVKAFQEEIAPIQDNVNHVN  1321

Query  182   DLALKLLRD---YSADDTRKVHMITENINASWR----SIHKRVSEREAALEE  226
              LA          S D+  ++    +++N  WR    SI + +S+   A ++
Sbjct  1322  QLASTFRPSDIQLSPDNLSRI----DDLNMRWRLLQISIEEHLSQLTTAFKD  1465


>gb|BC085236.1| Mus musculus dystrophin, muscular dystrophy, mRNA (cDNA clone 
IMAGE:5357162), partial cds
Length=2509

 Score = 1519 bits (3932),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 722/749 (96%), Positives = 737/749 (98%), Gaps = 0/749 (0%)
 Frame = +1

Query  200   HMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDAT  259
             HMITENIN SW +IHKRVSE+EAALEETHRLLQQFPLDLEKFL+W+TEAETTANVLQDA+
Sbjct  1     HMITENINTSWGNIHKRVSEQEAALEETHRLLQQFPLDLEKFLSWITEAETTANVLQDAS  180

Query  260   RKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRL  319
             RKE+LLEDS+GV+ELMK WQDLQGEIE HTD+YHNLDEN QKILRSLEGSD+A LLQRRL
Sbjct  181   RKEKLLEDSRGVRELMKPWQDLQGEIETHTDIYHNLDENGQKILRSLEGSDEAPLLQRRL  360

Query  320   DNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFP  379
             DNMNFKWSEL+KKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFP
Sbjct  361   DNMNFKWSELQKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFP  540

Query  380   AVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQN  439
             AVQKQND+HRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQN
Sbjct  541   AVQKQNDIHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQN  720

Query  440   VTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGS  499
             VTRLLRKQAEEVN EW+KLNL SADWQRKIDE LERLQELQEA DELDLKLRQAEVIKGS
Sbjct  721   VTRLLRKQAEEVNAEWDKLNLRSADWQRKIDEALERLQELQEAADELDLKLRQAEVIKGS  900

Query  500   WQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLED  559
             WQPVGDLLIDSLQDHLEKVKALRGEIAPLKENV+ VNDLA QLTTLGIQLSPYNLSTLED
Sbjct  901   WQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVNRVNDLAHQLTTLGIQLSPYNLSTLED  1080

Query  560   LNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQ  619
             LNTRW+LLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQ
Sbjct  1081  LNTRWRLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQ  1260

Query  620   TTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK  679
             TTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK
Sbjct  1261  TTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK  1440

Query  680   QNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSF  739
             QNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSF
Sbjct  1441  QNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSF  1620

Query  740   KTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNI  799
             KTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNI
Sbjct  1621  KTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNI  1800

Query  800   EPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKEC  859
             EPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKEC
Sbjct  1801  EPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKEC  1980

Query  860   PIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNK  919
             PIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNK
Sbjct  1981  PIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNK  2160

Query  920   FRTKRYFAKHPRMGYLPVQTVLEGDNMET  948
             FRTKRYFAKHPRMGYLPVQTVLEGDNMET
Sbjct  2161  FRTKRYFAKHPRMGYLPVQTVLEGDNMET  2247


>ref|XM_419648.2| PREDICTED: Gallus gallus utrophin (homologous to dystrophin) 
(UTRN), mRNA
Length=8538

 Score = 1508 bits (3903),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 731/1213 (60%), Positives = 925/1213 (76%), Gaps = 37/1213 (3%)
 Frame = +1

Query  7     LEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQ  66
             LE+ A AD ++  TEL +WL L+DQ++KS  V VG+ E+IN  I + K T  DL+QR PQ
Sbjct  4795  LELSAPADLDKTTTELAEWLVLIDQMLKSNIVTVGNAEEINRTIARMKVTKADLDQRHPQ  4974

Query  67    LEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWL  126
             L+ + T AQNLKNKTS+ + RT+IT+++E+++NQWD  Q  ++ R+QQL  ML DS QW 
Sbjct  4975  LDSVFTLAQNLKNKTSSSDIRTVITEKLEKVKNQWDNTQHGVEVRQQQLKYMLSDSMQWD  5154

Query  127   EAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALK  186
             E ++E E ++ Q   +L   ++ P   +A+ K+I++ K L  DL +    V   NDL+ K
Sbjct  5155  EQRKEMEHLMEQCEIRLRMLQQAPK--EALIKQISDNKLLVHDLHRGDITVAAFNDLSNK  5328

Query  187   LLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
             LLR+Y  DDTR+V   T+ +N  W ++++R  +R+  LE   + +Q    DLE FL WL 
Sbjct  5329  LLREYRDDDTRRVKETTDQMNTCWVNLNQRAVDRQNFLETELKTVQTSCKDLESFLKWLQ  5508

Query  247   EAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSL  306
             EAETT NVL DA R+E   +DS  V+EL KQ QD+Q EI+AH D++ ++D N QK++++L
Sbjct  5509  EAETTVNVLADAARRENTAQDSACVRELRKQMQDIQAEIDAHNDIFKSIDGNRQKMVKAL  5688

Query  307   EGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDD  366
               S++A LLQ RLD+MN +W++L+ KS NIR+HLEAS+++W RL  SL+EL+ WL +KD+
Sbjct  5689  GNSEEAALLQHRLDDMNQRWNDLKVKSANIRAHLEASAEKWNRLLTSLEELIKWLNMKDE  5868

Query  367   ELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQ  426
             EL +Q PIGGD P +Q+Q D  +A +RELK KE  I++ ++  RIFL +QP+EG E    
Sbjct  5869  ELKKQMPIGGDVPTLQQQYDHCKALRRELKDKEQTILNAVDQARIFLADQPIEGPE----  6036

Query  427   EPR-------ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQEL  479
             EPR       EL PEE+A  + + +RKQ+ EV  +WE LN  ++ WQ+++D+ LE+L++L
Sbjct  6037  EPRRSVHSKTELTPEEKAMRIAKAMRKQSSEVKEKWENLNASASIWQKQVDKALEKLKDL  6216

Query  480   QEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLA  539
             Q A D+LD  L++AE ++  W+PVGDLLIDSL DH+EK  A R EIAP+   V  VNDL+
Sbjct  6217  QCAMDDLDADLKEAENVRNGWKPVGDLLIDSLPDHIEKTTAFREEIAPINLKVKTVNDLS  6396

Query  540   RQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQG  599
              QL+ L +  S      L+DLN RWKLLQV+VEDR++QL EAHRDFGPASQHFLSTSVQ 
Sbjct  6397  SQLSPLDLYPSLKMSCQLDDLNMRWKLLQVSVEDRLKQLQEAHRDFGPASQHFLSTSVQF  6576

Query  600   PWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKAL  659
             PW+R++S NKVPYYINHETQTTCWDHPKMT+L+QSLADLNNVRFSAYRTA+K+RRLQKAL
Sbjct  6577  PWQRSVSHNKVPYYINHETQTTCWDHPKMTDLFQSLADLNNVRFSAYRTAIKIRRLQKAL  6756

Query  660   CLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCL  719
             CLDLL L+   +   QH L QNDQ + +  +I+CLTTIY  LE++HN++VNVPLCVDMCL
Sbjct  6757  CLDLLELNTTTEIFKQHKLSQNDQLVGVQDVISCLTTIYSGLEEKHNDMVNVPLCVDMCL  6936

Query  720   NWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLH  779
             NWLLNVYD+GRTG+IRV S K G++SL K  LE+KYRYLFK+V+  T  CDQR+LGLLLH
Sbjct  6937  NWLLNVYDSGRTGKIRVQSLKIGLMSLSKGLLEEKYRYLFKEVSGPTEMCDQRQLGLLLH  7116

Query  780   DSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLH  839
             D+IQIPRQLGEVA+FGGSNIEPSVRSCFQ  +NKPEI    F+DWM LEPQSMVWLPVLH
Sbjct  7117  DAIQIPRQLGEVAAFGGSNIEPSVRSCFQQNHNKPEITVKQFIDWMHLEPQSMVWLPVLH  7296

Query  840   RVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEY  899
             RVAAAETAKHQAKCNICKECPI+GFRYRSLKHFNYD+CQSCFFSGR AKGHK+HYPMVEY
Sbjct  7297  RVAAAETAKHQAKCNICKECPIVGFRYRSLKHFNYDVCQSCFFSGRTAKGHKLHYPMVEY  7476

Query  900   CTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET-----------  948
             C PTTSGEDVRDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDN+ET           
Sbjct  7477  CIPTTSGEDVRDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNLETPITLISMWPEQ  7656

Query  949   --PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSL  1006
               P+ SPQL HDDTHSRIE YA+RLA+ME +NGS+L DS S   S++DEH LIQ YCQ+L
Sbjct  7657  YDPSQSPQLFHDDTHSRIEQYATRLAQMERTNGSFLTDSSSTTGSVEDEHALIQQYCQTL  7836

Query  1007  NQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPL  1066
               +SP+SQP+SPAQIL S+E EERGELERI+ADLEEE R+LQ EY++LK+QH  +G++PL
Sbjct  7837  GGESPVSQPQSPAQILKSVEKEERGELERIIADLEEEQRSLQIEYEQLKEQHLRRGINPL  8016

Query  1067  PSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQ  1126
              SPP+ + +   +  DAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQ
Sbjct  8017  ASPPDSIVSPQHASEDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQ  8196

Query  1127  PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSM---GEEDLLSPPQDTSTGL  1183
             P+++++VNG   +SP TS Q S    P+       +TS      GE DLL PP DT+T L
Sbjct  8197  PESDSRVNG---ASPCTSPQHSALGYPL-----DQETSSQFHQAGEYDLLVPPHDTNTDL  8352

Query  1184  EEVMEQLNNSFPS  1196
              +VMEQ+N++FP+
Sbjct  8353  TDVMEQINSTFPA  8391


 Score = 53.1 bits (126),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 83/387 (21%), Positives = 166/387 (42%), Gaps = 50/387 (12%)
 Frame = +1

Query  10    PALADFNRAWTELTDWLSLLDQVIKSQRVMVG------------------DLE----DIN  47
             P LA+ NR + +++       Q IKS +++VG                  DL+    DI 
Sbjct  3304  PKLAELNRNFEKVS-------QHIKSAKMLVGQERLPVMSEPREVRVGFPDLDKFESDIQ  3462

Query  48    EM--IIKQKATMQD----LEQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQW  101
              M  ++++   + +    L+Q R Q+EE++     L  +      R  I  ++  +Q ++
Sbjct  3463  NMLKVVEKHQELSEGDEKLDQERAQIEEVLQRGGQLLQQPMEDNKREKIRMQLVLLQTKY  3642

Query  102   DEVQEHLQNRRQQLNEMLKDSTQWLEAKE--EAEQVLGQARAKLESWKEGPYTVDAIQKK  159
             + VQ     +R + +      TQ   A+   E  +VL  A A +E    GP     I + 
Sbjct  3643  NNVQAVAVQQRLKGHFATGVRTQPFSAEYLVEINKVL-LAMADVELLLNGPELNTGIYED  3819

Query  160   ITETKQLAKDLR----QWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHK  215
              +  +   K+++    +    + V ++    ++ + S  +  ++      +NA W  I++
Sbjct  3820  FSTQEDALKNVKDILDKLGDQIAVIHEKQPDVILEASGPEAIQIGDALTQLNAEWDRINR  3999

Query  216   RVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELM  275
               ++R+ + +      +QF  DL     W+TEAE    +L DA    R  +DS  ++   
Sbjct  4000  MYNDRKCSFDRAIEAWRQFHCDLNDLSQWITEAE---GLLADA----RGPDDSLDLQTAG  4158

Query  276   KQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLN  335
                Q+L+  + +H      L+   + I++ L  +D +  LQ +L  +N +W  +  + ++
Sbjct  4159  LHQQELEEGVHSHQSSVLALNRTGEGIIQKLSATDGS-FLQEKLAGLNRRWKAITAEVMD  4335

Query  336   IRSHLEASSDQWKRLHLSLQELLVWLQ  362
              +  L+  + Q       L EL  WL+
Sbjct  4336  RQQRLKGENQQLIDYRKKLDELRCWLE  4416


>ref|XM_518782.2| PREDICTED: Pan troglodytes utrophin, transcript variant 3 (UTRN), 
mRNA
Length=12385

 Score = 1498 bits (3877),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 728/1209 (60%), Positives = 923/1209 (76%), Gaps = 31/1209 (2%)
 Frame = +2

Query  8      EVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQL  67
              E+   AD ++  TEL DWL L+DQ++KS  V VGD+E+IN+ + + K T  DLEQR PQL
Sbjct  6731   EISIPADLDKTITELADWLVLIDQMLKSNIVTVGDVEEINKTVSRMKITKADLEQRHPQL  6910

Query  68     EELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLE  127
              + + T AQNLKNK S+ + RT IT+++ER++NQWD  Q  ++ R+QQL +M+ DS QW +
Sbjct  6911   DYVFTLAQNLKNKASSSDVRTAITEKLERVKNQWDGTQHGVELRQQQLEDMIIDSLQWDD  7090

Query  128    AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
               +EE E+++ +  A+L   ++     D + K+I++ + L ++L      V   +++  KL
Sbjct  7091   HREETEELMRKYEARLYILQQARR--DPLTKQISDNQILLQELGPGDGIVMAFDNVLQKL  7264

Query  188    LRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTE  247
              L +Y +DDTR V   TE +  SW ++ + +++R+ ALE   R +Q    DLE FL W+ E
Sbjct  7265   LEEYGSDDTRNVKETTEYLKTSWINLKQSIADRQNALEAEWRTVQASRRDLENFLKWIQE  7444

Query  248    AETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLE  307
              AETT NVL DA+ +E  L+DS   +EL +Q QD+Q EI+AH D++ ++D N QK++++L 
Sbjct  7445   AETTVNVLADASNRENALQDSILARELKQQMQDIQAEIDAHNDIFKSIDGNRQKMVKALG  7624

Query  308    GSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDE  367
               S++A +LQ RLD+MN +W++L+ KS +IR+HLEAS+++W RL +SL+EL+ WL +KD+E
Sbjct  7625   NSEEATMLQHRLDDMNQRWNDLKAKSASIRAHLEASAEKWNRLLMSLEELIKWLNMKDEE  7804

Query  368    LSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQE  427
              L +Q PIGGD PA+Q Q D  +A +RELK KE  +++ ++  R+FL +QP+E  E    E
Sbjct  7805   LKKQMPIGGDVPALQLQYDHCKALRRELKEKEYSVLNAVDQARVFLADQPIEAPE----E  7972

Query  428    PR-------ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              PR       EL PEERAQ + + +RKQ+ EV  +WE LN  +++WQ+++D+ LE+L++LQ
Sbjct  7973   PRRNLQSKTELTPEERAQKIAKAMRKQSSEVKEKWESLNAVTSNWQKQVDKALEKLRDLQ  8152

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
               A D+LD  +++AE ++  W+PVGDLLIDSLQDH+EK+ A R EIAP+   V  VNDL+ 
Sbjct  8153   GAMDDLDADMKEAESVRNGWKPVGDLLIDSLQDHIEKIMAFREEIAPINFKVKTVNDLSS  8332

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QL+ L +  S      L+DLN RWKLLQV+V+DR++QL EAHRDFGP+SQHFLSTSVQ P
Sbjct  8333   QLSPLDLHPSLKMSRQLDDLNMRWKLLQVSVDDRLKQLQEAHRDFGPSSQHFLSTSVQLP  8512

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              W+R+IS NKVPYYINH+TQTTCWDHPKMTEL+QSLADLNNVRFSAYRTA+K+RRLQKALC
Sbjct  8513   WQRSISHNKVPYYINHQTQTTCWDHPKMTELFQSLADLNNVRFSAYRTAIKIRRLQKALC  8692

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLL LS   +   QH L QNDQ + +  +INCLTT YD LEQ H +LVNVPLCVDMCLN
Sbjct  8693   LDLLELSTTNEIFKQHKLNQNDQLLSVPDVINCLTTTYDGLEQMHKDLVNVPLCVDMCLN  8872

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTG+IRV S K G++SL K  LE+KYRYLFK+VA  T  CDQR+LGLLLHD
Sbjct  8873   WLLNVYDTGRTGKIRVQSLKIGLMSLSKGLLEEKYRYLFKEVAGPTEMCDQRQLGLLLHD  9052

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              +IQIPRQLGEVA+FGGSNIEPSVRSCFQ  NNKPEI    F+DWMRLEPQSMVWLPVLHR
Sbjct  9053   AIQIPRQLGEVAAFGGSNIEPSVRSCFQQNNNKPEISVKEFIDWMRLEPQSMVWLPVLHR  9232

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPI+GFRYRSLKHFNYD+CQSCFFSGR AKGHK+HYPMVEYC
Sbjct  9233   VAAAETAKHQAKCNICKECPIVGFRYRSLKHFNYDVCQSCFFSGRTAKGHKLHYPMVEYC  9412

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPAS---------  951
               PTTSGEDVRDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDN+ETP +         
Sbjct  9413   IPTTSGEDVRDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNLETPITLISMWPEHY  9592

Query  952    ----SPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
                  SPQL HDDTHSRIE YA+RLA+ME +NGS+L DS S   S++DEH LIQ YCQ+L 
Sbjct  9593   DPSQSPQLFHDDTHSRIEQYATRLAQMERTNGSFLTDSSSTTGSVEDEHALIQQYCQTLG  9772

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
               +SP+SQP+SPAQIL S+E EERGELERI+ADLEEE RNLQ EY++LK QH  +GL P+ 
Sbjct  9773   GESPVSQPQSPAQILKSVEKEERGELERIIADLEEEQRNLQVEYEQLKDQHLRRGL-PVG  9949

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPE + +   +  D+ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  9950   SPPESIVSPHHTSEDSELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  10129

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              ++++++NG    SP  S Q S  S  +     G Q   + G EDLL+PP DTST L EVM
Sbjct  10130  ESDSRINGV---SPWASPQHSALSYSLDPDASGPQFHQAAG-EDLLAPPHDTSTDLTEVM  10297

Query  1188   EQLNNSFPS  1196
              EQ++N+FPS
Sbjct  10298  EQIHNTFPS  10324


 Score = 47.0 bits (110),  Expect = 0.075, Method: Compositional matrix adjust.
 Identities = 113/514 (21%), Positives = 219/514 (42%), Gaps = 78/514 (15%)
 Frame = +2

Query  7     LEVPALADFNRAWTELTDWLSLLDQVIKSQRVM-VGDLEDINEMIIKQKATMQDLEQRRP  65
             +++ A   F+    EL +W+      I++  +     ++D +EM  K KA  ++  +R P
Sbjct  2111  VDIEAKKKFDAISAELLNWILKSKTAIQTTEIKEYMKMQDTSEMKKKLKALEKEQRERIP  2290

Query  66    QLEELITAAQNLKNKTSNQEARTI-ITDRIERIQNQWDEVQEHLQN--RRQQLNEMLKDS  122
             + +EL    Q L  +   +   T  I + +E++ ++W  V +HL++  R+ QL E   D 
Sbjct  2291  RADELNQTGQILVEQMGKEGLPTEEIKNVLEKVSSEWKNVSQHLEDIERKIQLQE---DI  2461

Query  123   TQWLEAKEEAEQVLGQAR--AKLESWKEG-----PYTVDAIQKKITETKQLAKDLRQWQT  175
               + +  +E E+VL       K  S  E      P   D+ Q+++T       +L     
Sbjct  2462  NAYFKQLDELEKVLKTKEEWVKHTSISESSRQSLPSLKDSCQRELT-------NLLGLHP  2620

Query  176   NVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALE----------  225
              +++A      L+   SA D   V    ++    ++++ + V +R+  LE          
Sbjct  2621  KIEMARASCSALMSQPSAPDF--VQRGFDSFLGCYQAVQEAVEDRQQHLENELKGQPGHA  2794

Query  226   --ETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQG  283
               ET + L+    D E       +A+ + NVL D  + E+ L++ K + E++        
Sbjct  2795  YLETLKTLKDVLDDSE------NKAQASLNVLNDLAKVEKALQEKKTLDEIL--------  2932

Query  284   EIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELR---KKSLNIRSHL  340
               E      H L E ++ + +++   D   L ++  D++  KW++L+    K L++   L
Sbjct  2933  --ENQKPALHKLAEETKALEKNVH-PDVEKLYKQEFDDVQGKWNKLKVLVSKDLHL---L  3094

Query  341   EASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEP  400
             E  + + +        +  W+    D L +Q    GD   +Q+Q D   AF  E++T E 
Sbjct  3095  EEIALKLRAFEADSTVIEKWMDGVKDFLVKQQAAQGDDAGLQRQLDQCSAFVNEIETIES  3274

Query  401   VIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNL  460
               +  ++ +   L   P+ G++   Q              TRL   Q     T+ EKL+ 
Sbjct  3275  S-LKNMKEIETNLRSGPVAGIKTWVQ--------------TRLGDYQ-----TQLEKLSK  3394

Query  461   HSADWQRKIDETLERLQELQEATDELDLKLRQAE  494
                  + ++ E+ E+   L++   E+   + QAE
Sbjct  3395  EITTQKSRLSESQEKAANLKKDLAEMQEWMTQAE  3496


 Score = 44.3 bits (103),  Expect = 0.43, Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 8/156 (5%)
 Frame = +2

Query  206   INASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  265
             +NA W  I++  S+R+   +      +QF  DL     W+TEAE    +L D       L
Sbjct  5918  LNAKWDRINRMYSDRKGCFDRAMEEWRQFHCDLNDLTQWITEAE---ELLVDTCAPGGSL  6088

Query  266   EDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFK  325
             +  K         Q+L+  I +H   +  L+     I++ L  +D +  L+ +L  +N +
Sbjct  6089  DLEKA----RIHQQELEVGISSHQPSFAALNRTGDGIVQKLSQADGS-FLKDKLAGLNQR  6253

Query  326   WSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWL  361
             W  +  +  + +  L+  S Q       L E++ WL
Sbjct  6254  WDAIVAEVKDRQPRLKGESKQVMEYRHQLDEIICWL  6361


>ref|XM_001172875.1| PREDICTED: Pan troglodytes utrophin, transcript variant 2 (UTRN), 
mRNA
Length=12634

 Score = 1498 bits (3877),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 728/1209 (60%), Positives = 923/1209 (76%), Gaps = 31/1209 (2%)
 Frame = +2

Query  8      EVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQL  67
              E+   AD ++  TEL DWL L+DQ++KS  V VGD+E+IN+ + + K T  DLEQR PQL
Sbjct  6980   EISIPADLDKTITELADWLVLIDQMLKSNIVTVGDVEEINKTVSRMKITKADLEQRHPQL  7159

Query  68     EELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLE  127
              + + T AQNLKNK S+ + RT IT+++ER++NQWD  Q  ++ R+QQL +M+ DS QW +
Sbjct  7160   DYVFTLAQNLKNKASSSDVRTAITEKLERVKNQWDGTQHGVELRQQQLEDMIIDSLQWDD  7339

Query  128    AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
               +EE E+++ +  A+L   ++     D + K+I++ + L ++L      V   +++  KL
Sbjct  7340   HREETEELMRKYEARLYILQQARR--DPLTKQISDNQILLQELGPGDGIVMAFDNVLQKL  7513

Query  188    LRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTE  247
              L +Y +DDTR V   TE +  SW ++ + +++R+ ALE   R +Q    DLE FL W+ E
Sbjct  7514   LEEYGSDDTRNVKETTEYLKTSWINLKQSIADRQNALEAEWRTVQASRRDLENFLKWIQE  7693

Query  248    AETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLE  307
              AETT NVL DA+ +E  L+DS   +EL +Q QD+Q EI+AH D++ ++D N QK++++L 
Sbjct  7694   AETTVNVLADASNRENALQDSILARELKQQMQDIQAEIDAHNDIFKSIDGNRQKMVKALG  7873

Query  308    GSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDE  367
               S++A +LQ RLD+MN +W++L+ KS +IR+HLEAS+++W RL +SL+EL+ WL +KD+E
Sbjct  7874   NSEEATMLQHRLDDMNQRWNDLKAKSASIRAHLEASAEKWNRLLMSLEELIKWLNMKDEE  8053

Query  368    LSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQE  427
              L +Q PIGGD PA+Q Q D  +A +RELK KE  +++ ++  R+FL +QP+E  E    E
Sbjct  8054   LKKQMPIGGDVPALQLQYDHCKALRRELKEKEYSVLNAVDQARVFLADQPIEAPE----E  8221

Query  428    PR-------ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              PR       EL PEERAQ + + +RKQ+ EV  +WE LN  +++WQ+++D+ LE+L++LQ
Sbjct  8222   PRRNLQSKTELTPEERAQKIAKAMRKQSSEVKEKWESLNAVTSNWQKQVDKALEKLRDLQ  8401

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
               A D+LD  +++AE ++  W+PVGDLLIDSLQDH+EK+ A R EIAP+   V  VNDL+ 
Sbjct  8402   GAMDDLDADMKEAESVRNGWKPVGDLLIDSLQDHIEKIMAFREEIAPINFKVKTVNDLSS  8581

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QL+ L +  S      L+DLN RWKLLQV+V+DR++QL EAHRDFGP+SQHFLSTSVQ P
Sbjct  8582   QLSPLDLHPSLKMSRQLDDLNMRWKLLQVSVDDRLKQLQEAHRDFGPSSQHFLSTSVQLP  8761

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              W+R+IS NKVPYYINH+TQTTCWDHPKMTEL+QSLADLNNVRFSAYRTA+K+RRLQKALC
Sbjct  8762   WQRSISHNKVPYYINHQTQTTCWDHPKMTELFQSLADLNNVRFSAYRTAIKIRRLQKALC  8941

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLL LS   +   QH L QNDQ + +  +INCLTT YD LEQ H +LVNVPLCVDMCLN
Sbjct  8942   LDLLELSTTNEIFKQHKLNQNDQLLSVPDVINCLTTTYDGLEQMHKDLVNVPLCVDMCLN  9121

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTG+IRV S K G++SL K  LE+KYRYLFK+VA  T  CDQR+LGLLLHD
Sbjct  9122   WLLNVYDTGRTGKIRVQSLKIGLMSLSKGLLEEKYRYLFKEVAGPTEMCDQRQLGLLLHD  9301

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              +IQIPRQLGEVA+FGGSNIEPSVRSCFQ  NNKPEI    F+DWMRLEPQSMVWLPVLHR
Sbjct  9302   AIQIPRQLGEVAAFGGSNIEPSVRSCFQQNNNKPEISVKEFIDWMRLEPQSMVWLPVLHR  9481

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPI+GFRYRSLKHFNYD+CQSCFFSGR AKGHK+HYPMVEYC
Sbjct  9482   VAAAETAKHQAKCNICKECPIVGFRYRSLKHFNYDVCQSCFFSGRTAKGHKLHYPMVEYC  9661

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPAS---------  951
               PTTSGEDVRDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDN+ETP +         
Sbjct  9662   IPTTSGEDVRDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNLETPITLISMWPEHY  9841

Query  952    ----SPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
                  SPQL HDDTHSRIE YA+RLA+ME +NGS+L DS S   S++DEH LIQ YCQ+L 
Sbjct  9842   DPSQSPQLFHDDTHSRIEQYATRLAQMERTNGSFLTDSSSTTGSVEDEHALIQQYCQTLG  10021

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
               +SP+SQP+SPAQIL S+E EERGELERI+ADLEEE RNLQ EY++LK QH  +GL P+ 
Sbjct  10022  GESPVSQPQSPAQILKSVEKEERGELERIIADLEEEQRNLQVEYEQLKDQHLRRGL-PVG  10198

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPE + +   +  D+ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  10199  SPPESIVSPHHTSEDSELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  10378

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              ++++++NG    SP  S Q S  S  +     G Q   + G EDLL+PP DTST L EVM
Sbjct  10379  ESDSRINGV---SPWASPQHSALSYSLDPDASGPQFHQAAG-EDLLAPPHDTSTDLTEVM  10546

Query  1188   EQLNNSFPS  1196
              EQ++N+FPS
Sbjct  10547  EQIHNTFPS  10573


 Score = 47.0 bits (110),  Expect = 0.075, Method: Compositional matrix adjust.
 Identities = 113/514 (21%), Positives = 219/514 (42%), Gaps = 78/514 (15%)
 Frame = +2

Query  7     LEVPALADFNRAWTELTDWLSLLDQVIKSQRVM-VGDLEDINEMIIKQKATMQDLEQRRP  65
             +++ A   F+    EL +W+      I++  +     ++D +EM  K KA  ++  +R P
Sbjct  2360  VDIEAKKKFDAISAELLNWILKSKTAIQTTEIKEYMKMQDTSEMKKKLKALEKEQRERIP  2539

Query  66    QLEELITAAQNLKNKTSNQEARTI-ITDRIERIQNQWDEVQEHLQN--RRQQLNEMLKDS  122
             + +EL    Q L  +   +   T  I + +E++ ++W  V +HL++  R+ QL E   D 
Sbjct  2540  RADELNQTGQILVEQMGKEGLPTEEIKNVLEKVSSEWKNVSQHLEDIERKIQLQE---DI  2710

Query  123   TQWLEAKEEAEQVLGQAR--AKLESWKEG-----PYTVDAIQKKITETKQLAKDLRQWQT  175
               + +  +E E+VL       K  S  E      P   D+ Q+++T       +L     
Sbjct  2711  NAYFKQLDELEKVLKTKEEWVKHTSISESSRQSLPSLKDSCQRELT-------NLLGLHP  2869

Query  176   NVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALE----------  225
              +++A      L+   SA D   V    ++    ++++ + V +R+  LE          
Sbjct  2870  KIEMARASCSALMSQPSAPDF--VQRGFDSFLGCYQAVQEAVEDRQQHLENELKGQPGHA  3043

Query  226   --ETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQG  283
               ET + L+    D E       +A+ + NVL D  + E+ L++ K + E++        
Sbjct  3044  YLETLKTLKDVLDDSE------NKAQASLNVLNDLAKVEKALQEKKTLDEIL--------  3181

Query  284   EIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELR---KKSLNIRSHL  340
               E      H L E ++ + +++   D   L ++  D++  KW++L+    K L++   L
Sbjct  3182  --ENQKPALHKLAEETKALEKNVH-PDVEKLYKQEFDDVQGKWNKLKVLVSKDLHL---L  3343

Query  341   EASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEP  400
             E  + + +        +  W+    D L +Q    GD   +Q+Q D   AF  E++T E 
Sbjct  3344  EEIALKLRAFEADSTVIEKWMDGVKDFLVKQQAAQGDDAGLQRQLDQCSAFVNEIETIES  3523

Query  401   VIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNL  460
               +  ++ +   L   P+ G++   Q              TRL   Q     T+ EKL+ 
Sbjct  3524  S-LKNMKEIETNLRSGPVAGIKTWVQ--------------TRLGDYQ-----TQLEKLSK  3643

Query  461   HSADWQRKIDETLERLQELQEATDELDLKLRQAE  494
                  + ++ E+ E+   L++   E+   + QAE
Sbjct  3644  EITTQKSRLSESQEKAANLKKDLAEMQEWMTQAE  3745


 Score = 44.3 bits (103),  Expect = 0.43, Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 8/156 (5%)
 Frame = +2

Query  206   INASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  265
             +NA W  I++  S+R+   +      +QF  DL     W+TEAE    +L D       L
Sbjct  6167  LNAKWDRINRMYSDRKGCFDRAMEEWRQFHCDLNDLTQWITEAE---ELLVDTCAPGGSL  6337

Query  266   EDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFK  325
             +  K         Q+L+  I +H   +  L+     I++ L  +D +  L+ +L  +N +
Sbjct  6338  DLEKA----RIHQQELEVGISSHQPSFAALNRTGDGIVQKLSQADGS-FLKDKLAGLNQR  6502

Query  326   WSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWL  361
             W  +  +  + +  L+  S Q       L E++ WL
Sbjct  6503  WDAIVAEVKDRQPRLKGESKQVMEYRHQLDEIICWL  6610


>ref|XM_001172869.1| PREDICTED: Pan troglodytes utrophin, transcript variant 1 (UTRN), 
mRNA
Length=12748

 Score = 1498 bits (3877),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 728/1209 (60%), Positives = 923/1209 (76%), Gaps = 31/1209 (2%)
 Frame = +2

Query  8      EVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQL  67
              E+   AD ++  TEL DWL L+DQ++KS  V VGD+E+IN+ + + K T  DLEQR PQL
Sbjct  7094   EISIPADLDKTITELADWLVLIDQMLKSNIVTVGDVEEINKTVSRMKITKADLEQRHPQL  7273

Query  68     EELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLE  127
              + + T AQNLKNK S+ + RT IT+++ER++NQWD  Q  ++ R+QQL +M+ DS QW +
Sbjct  7274   DYVFTLAQNLKNKASSSDVRTAITEKLERVKNQWDGTQHGVELRQQQLEDMIIDSLQWDD  7453

Query  128    AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
               +EE E+++ +  A+L   ++     D + K+I++ + L ++L      V   +++  KL
Sbjct  7454   HREETEELMRKYEARLYILQQARR--DPLTKQISDNQILLQELGPGDGIVMAFDNVLQKL  7627

Query  188    LRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTE  247
              L +Y +DDTR V   TE +  SW ++ + +++R+ ALE   R +Q    DLE FL W+ E
Sbjct  7628   LEEYGSDDTRNVKETTEYLKTSWINLKQSIADRQNALEAEWRTVQASRRDLENFLKWIQE  7807

Query  248    AETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLE  307
              AETT NVL DA+ +E  L+DS   +EL +Q QD+Q EI+AH D++ ++D N QK++++L 
Sbjct  7808   AETTVNVLADASNRENALQDSILARELKQQMQDIQAEIDAHNDIFKSIDGNRQKMVKALG  7987

Query  308    GSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDE  367
               S++A +LQ RLD+MN +W++L+ KS +IR+HLEAS+++W RL +SL+EL+ WL +KD+E
Sbjct  7988   NSEEATMLQHRLDDMNQRWNDLKAKSASIRAHLEASAEKWNRLLMSLEELIKWLNMKDEE  8167

Query  368    LSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQE  427
              L +Q PIGGD PA+Q Q D  +A +RELK KE  +++ ++  R+FL +QP+E  E    E
Sbjct  8168   LKKQMPIGGDVPALQLQYDHCKALRRELKEKEYSVLNAVDQARVFLADQPIEAPE----E  8335

Query  428    PR-------ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              PR       EL PEERAQ + + +RKQ+ EV  +WE LN  +++WQ+++D+ LE+L++LQ
Sbjct  8336   PRRNLQSKTELTPEERAQKIAKAMRKQSSEVKEKWESLNAVTSNWQKQVDKALEKLRDLQ  8515

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
               A D+LD  +++AE ++  W+PVGDLLIDSLQDH+EK+ A R EIAP+   V  VNDL+ 
Sbjct  8516   GAMDDLDADMKEAESVRNGWKPVGDLLIDSLQDHIEKIMAFREEIAPINFKVKTVNDLSS  8695

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QL+ L +  S      L+DLN RWKLLQV+V+DR++QL EAHRDFGP+SQHFLSTSVQ P
Sbjct  8696   QLSPLDLHPSLKMSRQLDDLNMRWKLLQVSVDDRLKQLQEAHRDFGPSSQHFLSTSVQLP  8875

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              W+R+IS NKVPYYINH+TQTTCWDHPKMTEL+QSLADLNNVRFSAYRTA+K+RRLQKALC
Sbjct  8876   WQRSISHNKVPYYINHQTQTTCWDHPKMTELFQSLADLNNVRFSAYRTAIKIRRLQKALC  9055

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLL LS   +   QH L QNDQ + +  +INCLTT YD LEQ H +LVNVPLCVDMCLN
Sbjct  9056   LDLLELSTTNEIFKQHKLNQNDQLLSVPDVINCLTTTYDGLEQMHKDLVNVPLCVDMCLN  9235

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTG+IRV S K G++SL K  LE+KYRYLFK+VA  T  CDQR+LGLLLHD
Sbjct  9236   WLLNVYDTGRTGKIRVQSLKIGLMSLSKGLLEEKYRYLFKEVAGPTEMCDQRQLGLLLHD  9415

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              +IQIPRQLGEVA+FGGSNIEPSVRSCFQ  NNKPEI    F+DWMRLEPQSMVWLPVLHR
Sbjct  9416   AIQIPRQLGEVAAFGGSNIEPSVRSCFQQNNNKPEISVKEFIDWMRLEPQSMVWLPVLHR  9595

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPI+GFRYRSLKHFNYD+CQSCFFSGR AKGHK+HYPMVEYC
Sbjct  9596   VAAAETAKHQAKCNICKECPIVGFRYRSLKHFNYDVCQSCFFSGRTAKGHKLHYPMVEYC  9775

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPAS---------  951
               PTTSGEDVRDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDN+ETP +         
Sbjct  9776   IPTTSGEDVRDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNLETPITLISMWPEHY  9955

Query  952    ----SPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
                  SPQL HDDTHSRIE YA+RLA+ME +NGS+L DS S   S++DEH LIQ YCQ+L 
Sbjct  9956   DPSQSPQLFHDDTHSRIEQYATRLAQMERTNGSFLTDSSSTTGSVEDEHALIQQYCQTLG  10135

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
               +SP+SQP+SPAQIL S+E EERGELERI+ADLEEE RNLQ EY++LK QH  +GL P+ 
Sbjct  10136  GESPVSQPQSPAQILKSVEKEERGELERIIADLEEEQRNLQVEYEQLKDQHLRRGL-PVG  10312

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPE + +   +  D+ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  10313  SPPESIVSPHHTSEDSELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  10492

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              ++++++NG    SP  S Q S  S  +     G Q   + G EDLL+PP DTST L EVM
Sbjct  10493  ESDSRINGV---SPWASPQHSALSYSLDPDASGPQFHQAAG-EDLLAPPHDTSTDLTEVM  10660

Query  1188   EQLNNSFPS  1196
              EQ++N+FPS
Sbjct  10661  EQIHNTFPS  10687


 Score = 47.0 bits (110),  Expect = 0.075, Method: Compositional matrix adjust.
 Identities = 113/514 (21%), Positives = 219/514 (42%), Gaps = 78/514 (15%)
 Frame = +2

Query  7     LEVPALADFNRAWTELTDWLSLLDQVIKSQRVM-VGDLEDINEMIIKQKATMQDLEQRRP  65
             +++ A   F+    EL +W+      I++  +     ++D +EM  K KA  ++  +R P
Sbjct  2474  VDIEAKKKFDAISAELLNWILKSKTAIQTTEIKEYMKMQDTSEMKKKLKALEKEQRERIP  2653

Query  66    QLEELITAAQNLKNKTSNQEARTI-ITDRIERIQNQWDEVQEHLQN--RRQQLNEMLKDS  122
             + +EL    Q L  +   +   T  I + +E++ ++W  V +HL++  R+ QL E   D 
Sbjct  2654  RADELNQTGQILVEQMGKEGLPTEEIKNVLEKVSSEWKNVSQHLEDIERKIQLQE---DI  2824

Query  123   TQWLEAKEEAEQVLGQAR--AKLESWKEG-----PYTVDAIQKKITETKQLAKDLRQWQT  175
               + +  +E E+VL       K  S  E      P   D+ Q+++T       +L     
Sbjct  2825  NAYFKQLDELEKVLKTKEEWVKHTSISESSRQSLPSLKDSCQRELT-------NLLGLHP  2983

Query  176   NVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALE----------  225
              +++A      L+   SA D   V    ++    ++++ + V +R+  LE          
Sbjct  2984  KIEMARASCSALMSQPSAPDF--VQRGFDSFLGCYQAVQEAVEDRQQHLENELKGQPGHA  3157

Query  226   --ETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQG  283
               ET + L+    D E       +A+ + NVL D  + E+ L++ K + E++        
Sbjct  3158  YLETLKTLKDVLDDSE------NKAQASLNVLNDLAKVEKALQEKKTLDEIL--------  3295

Query  284   EIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELR---KKSLNIRSHL  340
               E      H L E ++ + +++   D   L ++  D++  KW++L+    K L++   L
Sbjct  3296  --ENQKPALHKLAEETKALEKNVH-PDVEKLYKQEFDDVQGKWNKLKVLVSKDLHL---L  3457

Query  341   EASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEP  400
             E  + + +        +  W+    D L +Q    GD   +Q+Q D   AF  E++T E 
Sbjct  3458  EEIALKLRAFEADSTVIEKWMDGVKDFLVKQQAAQGDDAGLQRQLDQCSAFVNEIETIES  3637

Query  401   VIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNL  460
               +  ++ +   L   P+ G++   Q              TRL   Q     T+ EKL+ 
Sbjct  3638  S-LKNMKEIETNLRSGPVAGIKTWVQ--------------TRLGDYQ-----TQLEKLSK  3757

Query  461   HSADWQRKIDETLERLQELQEATDELDLKLRQAE  494
                  + ++ E+ E+   L++   E+   + QAE
Sbjct  3758  EITTQKSRLSESQEKAANLKKDLAEMQEWMTQAE  3859


 Score = 44.3 bits (103),  Expect = 0.43, Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 8/156 (5%)
 Frame = +2

Query  206   INASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  265
             +NA W  I++  S+R+   +      +QF  DL     W+TEAE    +L D       L
Sbjct  6281  LNAKWDRINRMYSDRKGCFDRAMEEWRQFHCDLNDLTQWITEAE---ELLVDTCAPGGSL  6451

Query  266   EDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFK  325
             +  K         Q+L+  I +H   +  L+     I++ L  +D +  L+ +L  +N +
Sbjct  6452  DLEKA----RIHQQELEVGISSHQPSFAALNRTGDGIVQKLSQADGS-FLKDKLAGLNQR  6616

Query  326   WSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWL  361
             W  +  +  + +  L+  S Q       L E++ WL
Sbjct  6617  WDAIVAEVKDRQPRLKGESKQVMEYRHQLDEIICWL  6724


>ref|XM_001506948.1| PREDICTED: Ornithorhynchus anatinus similar to utrophin (homologous 
to dystrophin), (LOC100075517), mRNA
Length=10299

 Score = 1495 bits (3870),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 735/1221 (60%), Positives = 931/1221 (76%), Gaps = 35/1221 (2%)
 Frame = +1

Query  3      SSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQ  62
              + L LE+   AD ++  TEL DWL L+DQ++KS  V VG  E+IN+ I + K TM DLEQ
Sbjct  6523   TQLALELSLPADLDKTTTELADWLILIDQMLKSNIVTVGSAEEINQTIARMKITMADLEQ  6702

Query  63     RRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDS  122
              R PQL+ + T AQNLKNKTS+ + RT IT+++E+++NQWD  Q  ++ R+QQL +ML DS
Sbjct  6703   RHPQLDSVFTLAQNLKNKTSSSDVRTAITEKLEKVKNQWDNTQHGVEVRQQQLQDMLSDS  6882

Query  123    TQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVAND  182
               QW + ++E EQ+      +  +  + P   + + K++ E K LA+++ + +  +   ND
Sbjct  6883   LQWNDQRQETEQLFRHYEVRFHTLLQAPK--EPLVKQLPENKVLAQEMHRGEITIAAFND  7056

Query  183    LALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFL  242
              L+ KLLRDYS DDTRKV   T+++N SW ++++ + +R+ ALE   R LQ    DLE FL
Sbjct  7057   LSKKLLRDYSEDDTRKVKETTDHLNTSWINLNQSIGDRQNALEAELRTLQASLKDLEIFL  7236

Query  243    AWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKI  302
               W+ EAETT NVL DA+++E  L+D   ++E  KQ +D+Q EI+AH D++ ++D N QK+
Sbjct  7237   KWMQEAETTVNVLADASQRENALQDDVLMREFKKQMKDIQAEIDAHNDIFKSIDGNRQKM  7416

Query  303    LRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQ  362
              +++L  SD+A LLQ RLD+MN +W++L+ KS +IR+HLEAS+++W RL  SL+EL+ WL 
Sbjct  7417   VKALGNSDEAALLQHRLDDMNQRWNDLKAKSASIRAHLEASAEKWNRLLASLEELVKWLN  7596

Query  363    LKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLE  422
              LKD+EL++Q PIGGD PA+Q+Q D  +A +RELK KE  +++ ++  R+FL +QP+EGLE
Sbjct  7597   LKDEELNQQMPIGGDVPALQQQYDHCKALRRELKDKEQTVLNAVDQARVFLADQPVEGLE  7776

Query  423    ---KLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQEL  479
                 +  Q   EL PEE+AQ + + +RKQ+ EV  +WE LN  ++ WQ+++D+ LE+L++L
Sbjct  7777   ESRRHLQSKTELTPEEKAQRIAKTMRKQSSEVKGKWESLNAVTSSWQKQVDKALEKLKDL  7956

Query  480    QEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLA  539
              Q A D+LD  +++AE ++  W+PVGDLLIDSLQDH++K  A R EIAP+   V  VNDL+
Sbjct  7957   QGAMDDLDADMKEAETVRNGWKPVGDLLIDSLQDHIDKTTAFREEIAPISLKVKTVNDLS  8136

Query  540    RQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQG  599
               QL+ L +  S      L+DLN RWKLLQV+VEDR++QL EAHRDFGP+SQHFLSTSVQ 
Sbjct  8137   SQLSPLDLHPSLKMSRQLDDLNMRWKLLQVSVEDRLKQLQEAHRDFGPSSQHFLSTSVQL  8316

Query  600    PWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKAL  659
              PW+R++S NKVPYYINH+TQTTCWDHPKMTEL+QSLADLNNVRFSAYRTA+K+RRLQKAL
Sbjct  8317   PWQRSVSHNKVPYYINHQTQTTCWDHPKMTELFQSLADLNNVRFSAYRTAIKIRRLQKAL  8496

Query  660    CLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCL  719
              CLDLL L+   +   QH L QNDQ + +  +INCLTT YD LEQ+H +LVNVPLCVDMCL
Sbjct  8497   CLDLLELNTTNEVFQQHKLNQNDQLLSVPDVINCLTTTYDGLEQKHKDLVNVPLCVDMCL  8676

Query  720    NWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLH  779
              NWLLNVYDTGRTG+IRV S K G+ISL K  LE+KYRYLFK+VA  T  CDQR+LGLLLH
Sbjct  8677   NWLLNVYDTGRTGKIRVQSLKIGLISLSKGLLEEKYRYLFKEVAGPTEMCDQRQLGLLLH  8856

Query  780    DSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLH  839
              D+IQIPRQLGEVA+FGGSNIEPSVRSCFQ  NNKPEI    F+DWMRLEPQS+VWLPVLH
Sbjct  8857   DAIQIPRQLGEVAAFGGSNIEPSVRSCFQQNNNKPEINVKQFIDWMRLEPQSVVWLPVLH  9036

Query  840    RVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEY  899
              RVAAAETAKHQAKCNICKECPI+GFRYRSLKHFNYD+CQSCFFSGR AKGHK+HYPMVEY
Sbjct  9037   RVAAAETAKHQAKCNICKECPIVGFRYRSLKHFNYDVCQSCFFSGRTAKGHKLHYPMVEY  9216

Query  900    CTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET-----------  948
              C PTTSGEDVRDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDN+ET           
Sbjct  9217   CIPTTSGEDVRDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNLETPITLISMWPEQ  9396

Query  949    --PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSL  1006
                P+ SPQL HDDTHSRIE YA+RLA+ME +NGS L DS S   S++DEH LI  YCQ+L
Sbjct  9397   YDPSQSPQLFHDDTHSRIEQYATRLAQMERTNGSLLTDSSSTTGSVEDEHSLIHQYCQTL  9576

Query  1007   NQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPL  1066
                +SP+SQP+SPAQIL S+E EERGELERI++DLEEE R LQ EY++LK+QH  +G+SPL
Sbjct  9577   GGESPVSQPQSPAQILKSVEREERGELERIISDLEEEQRILQVEYEQLKEQHLKRGISPL  9756

Query  1067   PSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQ  1126
               SPP+ + +      D+ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQ
Sbjct  9757   SSPPDSVVSPQHLSGDSELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQ  9936

Query  1127   PQAEAKVNGTTV-SSP-----STSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTS  1180
              P++ A++NG +  SSP     S SL +  SSQ         QT+     +DLL PPQ TS
Sbjct  9937   PESNARINGISPWSSPQHSALSYSLDQDPSSQ-------FQQTA----ADDLLVPPQPTS  10083

Query  1181   TGLEEVMEQLNNSFPSSRGHN  1201
              T L +VMEQ+N++FPS   H 
Sbjct  10084  TDLTDVMEQINSTFPSCHSHG  10146


>gb|M37645.1|FSCDYSTRO Torpedo californica dystrophin mRNA, 3' end
Length=2654

 Score = 1493 bits (3865),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 721/869 (82%), Positives = 787/869 (90%), Gaps = 13/869 (1%)
 Frame = +3

Query  343   SSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVI  402
             S +QWKRL +SLQ+ L W+ LK+DEL RQ PIGGD P V +QNDVHR FKRELK KEPV+
Sbjct  3     SGEQWKRLQISLQDFLTWMNLKNDELRRQMPIGGDAPTVCQQNDVHRIFKRELKAKEPVV  182

Query  403   MSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHS  462
             MS L+TV +FL +  +   E L   PRE  PEE  QNV + +RK AEEV  EW+KL+  S
Sbjct  183   MSALDTVHLFLADPAIRAPESLLTGPREKIPEENIQNVAKRIRKYAEEVKVEWDKLSNRS  362

Query  463   ADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALR  522
              DWQ++IDE L+RL ELQ++ DEL+LKLRQAE IK +WQPVGDLLIDSLQDH+EKVK  R
Sbjct  363   VDWQKRIDEALKRLLELQDSMDELNLKLRQAEAIKDTWQPVGDLLIDSLQDHIEKVKVFR  542

Query  523   GEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAH  582
              EIAP+KENV+H+NDLA Q T   IQLSPYNL+ LEDLNTRWKLLQV++++ ++QLHEAH
Sbjct  543   AEIAPMKENVTHMNDLASQFTPPDIQLSPYNLNQLEDLNTRWKLLQVSIDELLKQLHEAH  722

Query  583   RDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVR  642
             RDFGP SQHFLSTSVQGPWERAISPNKVPYYINH+TQTTCWDHPKMTELYQSLADLNNVR
Sbjct  723   RDFGPTSQHFLSTSVQGPWERAISPNKVPYYINHQTQTTCWDHPKMTELYQSLADLNNVR  902

Query  643   FSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLE  702
             FSAYRTAMKLRRLQKALCLDLLSL +AC+A DQHNLKQNDQ +DIL+IINCLT+IYDRLE
Sbjct  903   FSAYRTAMKLRRLQKALCLDLLSLPSACEAFDQHNLKQNDQLLDILEIINCLTSIYDRLE  1082

Query  703   QEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQV  762
             QEH+NLVNVPLCVDMCLNWLLNVYDTGRTG+IRVLSFK+GI+S+CKAHLEDKYRYLFKQV
Sbjct  1083  QEHSNLVNVPLCVDMCLNWLLNVYDTGRTGKIRVLSFKSGIMSMCKAHLEDKYRYLFKQV  1262

Query  763   ASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFL  822
             AS TGFCDQRRLGLLLH++IQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFL
Sbjct  1263  ASPTGFCDQRRLGLLLHEAIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFL  1442

Query  823   DWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFF  882
             DWMRLEPQS+VW+PVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYD+CQSCFF
Sbjct  1443  DWMRLEPQSLVWMPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDVCQSCFF  1622

Query  883   SGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLE  942
             SGR AKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLE
Sbjct  1623  SGRTAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLE  1802

Query  943   GDNMET-------------PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPN  989
             GDN+ET             PASSPQLSHDDTHSRIEHY SRLAEMEN NGSYLNDSISPN
Sbjct  1803  GDNLETPVTLINFWPVDYEPASSPQLSHDDTHSRIEHYLSRLAEMENRNGSYLNDSISPN  1982

Query  990   ESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQA  1049
             ESIDDEHLLIQHYCQSLNQ+SPLSQPRSPAQILISLESEERGELERILADLE+ENRNLQ+
Sbjct  1983  ESIDDEHLLIQHYCQSLNQESPLSQPRSPAQILISLESEERGELERILADLEDENRNLQS  2162

Query  1050  EYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDH  1109
             EY++LKQQH+HKGLSPLPSPPEMMP SPQSPRDAELIAEAKLLRQHKGRLEARMQILEDH
Sbjct  2163  EYEKLKQQHDHKGLSPLPSPPEMMPISPQSPRDAELIAEAKLLRQHKGRLEARMQILEDH  2342

Query  1110  NKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGE  1169
             NKQLESQLHRLRQLLEQPQAE +VNGT+VSSPSTS QRSDSSQP+LL  VGSQTS  +GE
Sbjct  2343  NKQLESQLHRLRQLLEQPQAEVRVNGTSVSSPSTSSQRSDSSQPVLLHGVGSQTSGILGE  2522

Query  1170  EDLLSPPQDTSTGLEEVMEQLNNSFPSSR  1198
             +DLLS PQ TS+ LE+VMEQL++SFPSS+
Sbjct  2523  DDLLSAPQSTSSELEDVMEQLSSSFPSSQ  2609


>ref|XR_054516.1| PREDICTED: Taeniopygia guttata misc_RNA (LOC100220254), miscRNA
Length=10323

 Score = 1491 bits (3859),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 726/1217 (59%), Positives = 921/1217 (75%), Gaps = 31/1217 (2%)
 Frame = +1

Query  7      LEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQ  66
              LE+ A AD ++  TEL DWL L+DQ++KS  V VG+ E+IN  I + K T  D++ R PQ
Sbjct  6691   LELSAPADLDKTRTELADWLVLIDQMLKSNIVTVGNTEEINRTIARMKITNADMDHRHPQ  6870

Query  67     LEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWL  126
              L+ + T AQNLKNKTS+ + RT IT+++E+++NQWD  Q  ++ R+QQL  ML DS QW 
Sbjct  6871   LDSVFTLAQNLKNKTSSSDIRTEITEKMEQLKNQWDNTQHSVEVRQQQLKHMLADSLQWH  7050

Query  127    EAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALK  186
              E + E E ++ Q   +L    + P   + + K+I ++K L +DL +    V   NDL+ K
Sbjct  7051   EQRREMEHLMEQCEIRLRVLLQAPK--EMLTKQIADSKLLVQDLHRGDITVAAFNDLSNK  7224

Query  187    LLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
              LLR+Y  DD+RKV   T+ +N  W ++++R  +R+  LE   + +Q    DLE FL WL 
Sbjct  7225   LLREYRDDDSRKVKETTDQMNTCWVNLNQRAVDRQNFLETEMKTVQASHKDLESFLKWLQ  7404

Query  247    EAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSL  306
              EAETT NVL DA  +E+  +DS  ++EL KQ QD+Q EI+AH D++ ++D N QK++++L
Sbjct  7405   EAETTVNVLADAFEREKTAQDSVYIRELRKQMQDIQAEIDAHNDIFKSIDGNRQKMVKAL  7584

Query  307    EGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDD  366
                S++A LLQ RLD+MN +W++L+ KS NI++HLEAS+++W RL  SL+EL+ WL  KD+
Sbjct  7585   GNSEEAALLQHRLDDMNQRWNDLKAKSANIKAHLEASAEKWNRLLTSLEELIKWLNTKDE  7764

Query  367    ELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQ  426
              EL +Q P+GGD P +Q+Q D  +A +RELK KE  +++ ++  R+FL  QP+EG E    
Sbjct  7765   ELKKQMPVGGDVPTLQQQYDHCKALRRELKDKEQTVLNAVDQARVFLANQPIEGPE----  7932

Query  427    EPR-------ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQEL  479
              EPR       EL PEE+A  + + +RKQ+ EV  +WE LN  ++ WQ+++D+ LE+L++L
Sbjct  7933   EPRRSLHSKTELTPEEKALKIAKAMRKQSSEVKEKWENLNASASIWQKQVDKALEKLKDL  8112

Query  480    QEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLA  539
              Q A D+LD  L++AE ++  W+PVGDLLIDSL DH+EK  A R EIAP+   V  VNDL+
Sbjct  8113   QCAMDDLDADLKEAENVRNGWKPVGDLLIDSLPDHIEKTTAFREEIAPINLKVKTVNDLS  8292

Query  540    RQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQG  599
               QL+ L +  S      L+DLN RWKLLQV+VEDR++QL EAHRDFGPASQHFLSTSVQ 
Sbjct  8293   SQLSPLDLYPSLKMSRQLDDLNMRWKLLQVSVEDRLKQLQEAHRDFGPASQHFLSTSVQF  8472

Query  600    PWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKAL  659
              PW+R++S NKVPYYINHETQTTCWDHPKMT+L+QSLADLNNVRFSAYRTA+K+RRLQKAL
Sbjct  8473   PWQRSVSHNKVPYYINHETQTTCWDHPKMTDLFQSLADLNNVRFSAYRTAIKIRRLQKAL  8652

Query  660    CLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCL  719
              CLDLL L+   +   QH L QNDQ + +  +I+CLTTIY  LE++H ++VNVPLCVDMCL
Sbjct  8653   CLDLLDLNTTSEVFKQHKLSQNDQLIGVQDVISCLTTIYSGLEEKHKDMVNVPLCVDMCL  8832

Query  720    NWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLH  779
              NWLLNVYD+GRTG+IRV S K G++SL K  LE+KYRYLFK+VA  T  CDQR+LGLLLH
Sbjct  8833   NWLLNVYDSGRTGKIRVQSLKIGLMSLSKGLLEEKYRYLFKEVAGPTEMCDQRQLGLLLH  9012

Query  780    DSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLH  839
              D+IQIPRQLGEVA+FGGSNIEPSVRSCFQ  +NKPEI    F+DWMRLEPQSMVWLPVLH
Sbjct  9013   DAIQIPRQLGEVAAFGGSNIEPSVRSCFQQNHNKPEITVKQFIDWMRLEPQSMVWLPVLH  9192

Query  840    RVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEY  899
              RVAAAETAKHQAKCNICKECPI+GFRYRSLKHFNYD+CQSCFFSGR AKGHK+HYPMVEY
Sbjct  9193   RVAAAETAKHQAKCNICKECPIVGFRYRSLKHFNYDVCQSCFFSGRTAKGHKLHYPMVEY  9372

Query  900    CTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET-----------  948
              C PTTSGEDVRDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDN+ET           
Sbjct  9373   CIPTTSGEDVRDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNLETPITLISMWPEQ  9552

Query  949    --PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSL  1006
                P+ SPQL HDDTHSRIE YA+RLA+ME +NGS+L DS S   S++DEH LIQ YCQ+L
Sbjct  9553   YDPSQSPQLFHDDTHSRIEQYATRLAQMERTNGSFLMDSSSTTGSVEDEHALIQQYCQTL  9732

Query  1007   NQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPL  1066
                +SP+SQP+SPAQIL S+E EERGELERI+ADLEEE R+LQ EY++LK+QH  +G++PL
Sbjct  9733   GGESPVSQPQSPAQILKSVEKEERGELERIIADLEEEQRSLQIEYEQLKEQHLRRGINPL  9912

Query  1067   PSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQ  1126
               SPP+ + +   +  DAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQ
Sbjct  9913   ASPPDSIVSPQHASEDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQ  10092

Query  1127   PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEV  1186
              P+++++VNG   +SP  S QRS    P L +   SQ   + G +DLL PP DT+T L +V
Sbjct  10093  PESDSRVNG---ASPCASPQRSALGFP-LEQDTSSQFHQTAG-DDLLVPPHDTNTDLTDV  10257

Query  1187   MEQLNNSFPSSRGHNVG  1203
              MEQ+NN+FP+      G
Sbjct  10258  MEQINNTFPACCSSFTG  10308


 Score = 50.1 bits (118),  Expect = 0.008, Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 10/158 (6%)
 Frame = +1

Query  206   INASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  265
             +NA W  I++  ++R+   +    + +QF  DL     W+ EAE    +L DA   +  L
Sbjct  5881  LNAEWDRINRMYNDRKCCFDRAIEVWRQFHCDLNDLSHWIAEAE---ELLADARGPDGSL  6051

Query  266   E-DSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNF  324
             E  + G+ +     Q+L+  + +H      L+   + I++ L  +D +  LQ +L  +N 
Sbjct  6052  ELQAAGLHQ-----QELEEGVSSHQTSISALNRTGEGIIQKLSATDGS-FLQEKLAGLNR  6213

Query  325   KWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQ  362
             +W  +  + ++ +  L+  + Q       L EL  WL+
Sbjct  6214  RWKAITTEVMDRQQRLKGENQQLIEYRKKLDELRCWLE  6327


 Score = 42.0 bits (97),  Expect = 1.9, Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 110/254 (43%), Gaps = 17/254 (6%)
 Frame = +1

Query  12    LADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELI  71
             L  +  A  E+  WL   +   + Q  + GD+E++ E     +  M +L   +  +  ++
Sbjct  973   LDSYQVALEEVLTWLLSAEDAFREQEEISGDVEEVKEQFSTHEGFMMELTAHQSSVGNVL  1152

Query  72    TAAQNLKNKTS-NQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKD--------S  122
              A   L  + S + E    I +++  + ++W+E++    +R+ +L++ML +         
Sbjct  1153  QAGNQLVAQGSLSPEEEFEIQEQMLLLNSRWEELRVESMDRQSRLHDMLMELQKQQLQQL  1332

Query  123   TQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVAND  182
             + WL   EE  Q       K+ES +     ++++QK++ E K L  DL   Q  V+    
Sbjct  1333  SDWLTVTEERIQ-------KMES-QLLAEDLESLQKQLEEHKSLQSDLEAEQVKVNSLTH  1488

Query  183   LALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFL  242
             + + +        T  +    + +   W ++ +   +R   L+E   L Q+   +     
Sbjct  1489  MVVIVDESSGESATAILEEQLQRLGERWTAVCRWTEDRRVKLQEIQLLWQELLEEQCLLK  1668

Query  243   AWLTEAETTANVLQ  256
             AWLTE E   + +Q
Sbjct  1669  AWLTEKEEALSKVQ  1710


>ref|XM_001380994.1| PREDICTED: Monodelphis domestica similar to utrophin (homologous 
to dystrophin), (LOC100031882), mRNA
Length=10395

 Score = 1481 bits (3835),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 735/1219 (60%), Positives = 929/1219 (76%), Gaps = 44/1219 (3%)
 Frame = +1

Query  4      SLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQR  63
              SL L VPA  D ++  TEL DWL L+DQ++KS  V VG+ E+I + I + K T  DLEQR
Sbjct  6670   SLELSVPA--DLDKTTTELADWLVLIDQMLKSNIVTVGNAEEIKQTIERMKITKADLEQR  6843

Query  64     RPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDST  123
               PQL+ + T AQNLKNKTS+ + RT IT+++E+++NQWD  Q  +  R+QQL +ML DS 
Sbjct  6844   HPQLDYVFTLAQNLKNKTSSSDIRTAITEKLEKVKNQWDNTQHGVDVRQQQLQDMLVDSE  7023

Query  124    QWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDL  183
              QW + +EE E+++ Q  AK+ S  + P   + + ++++E K L ++L + +  +   ++L
Sbjct  7024   QWNDLREETEELITQHEAKVHSVLKVPK--EPLIRQLSENKMLIQELNKGEVTMAAFSNL  7197

Query  184    ALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLA  243
                KLLRDYS DDTRKV+   +++NASW ++++ + +R+ ALE   R +Q    DLE FL 
Sbjct  7198   LKKLLRDYSGDDTRKVNETYDHLNASWINLNQSLCDRQNALEAELRTVQASLKDLESFLK  7377

Query  244    WLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKIL  303
              W+ EAETT NVL DA ++E  L+D+  VKEL KQ QD+Q EI+AH D++ ++D N QK++
Sbjct  7378   WMPEAETTVNVLADAAQRENALQDAGLVKELRKQIQDIQAEIDAHNDIFKSIDGNRQKMV  7557

Query  304    RSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQL  363
              ++L  SD+A LLQ RLD+MN +W++L+ KS +IR+HLEAS+++W RL  SL+EL+ WL +
Sbjct  7558   KALGNSDEAALLQHRLDDMNQRWNDLKAKSASIRAHLEASAEKWNRLLTSLEELIKWLNM  7737

Query  364    KDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEK  423
              KDDEL +Q PIGGD PA+Q Q D  +A +RELK KE  I++ ++  R+FL +QP+E  + 
Sbjct  7738   KDDELKKQMPIGGDVPALQLQYDHCKALRRELKEKEHSILNAVDQARVFLADQPIEAPD-  7914

Query  424    LYQEPR-------ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERL  476
                 EPR       EL PEE+AQ + + +RKQ+ EV  +WE LN  ++ WQ+++D+ LE+L
Sbjct  7915   ---EPRRNLQSKIELTPEEKAQKIAKAMRKQSSEVKEKWENLNAVTSSWQKQVDKALEKL  8085

Query  477    QELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVN  536
              ++LQ A D+LD  L++AE ++  W+PVGDLLIDSLQDH+EK  A R EIAP+   V  VN
Sbjct  8086   RDLQGAMDDLDADLKEAETVRNGWKPVGDLLIDSLQDHIEKTTAFREEIAPINLKVKTVN  8265

Query  537    DLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTS  596
              DL+ QL+ L +  S      L+DLN RWKLLQV+VEDR++QL EAHRDFGP+SQHFLSTS
Sbjct  8266   DLSSQLSPLDLHPSLKMSRQLDDLNMRWKLLQVSVEDRLKQLQEAHRDFGPSSQHFLSTS  8445

Query  597    VQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQ  656
              VQ PW+R++S NKVPYYINH+TQTTCWDHPKMTEL+QSL DLNNVRFSAYRTA+K+RRLQ
Sbjct  8446   VQLPWQRSVSHNKVPYYINHQTQTTCWDHPKMTELFQSLGDLNNVRFSAYRTAIKIRRLQ  8625

Query  657    KALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVD  716
              KALCLDLL L+   +   QH L QNDQ +++  +INCLTT YD LEQ H +LVNVPLCVD
Sbjct  8626   KALCLDLLELNTTNEIFKQHKLNQNDQLLNVPDVINCLTTTYDGLEQSHKDLVNVPLCVD  8805

Query  717    MCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGL  776
              MCLNWLLNVYDTGRTG+IRV S K G++SL K  LE+KYR LFK+VA  T  CDQR+LGL
Sbjct  8806   MCLNWLLNVYDTGRTGKIRVQSLKIGLMSLSKGLLEEKYRCLFKEVAGPTEMCDQRQLGL  8985

Query  777    LLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLP  836
              LLHD+IQIPRQLGEVA+FGGSNIEPSVRSCFQ  +NKPEI    F+DWMRLEPQSMVWLP
Sbjct  8986   LLHDAIQIPRQLGEVAAFGGSNIEPSVRSCFQQNHNKPEISVKEFIDWMRLEPQSMVWLP  9165

Query  837    VLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPM  896
              VLHRVAAAETAKHQAKCNICKECPI+GFRYRSLKHFNYD+CQSCFFSGR AKGHK+HYPM
Sbjct  9166   VLHRVAAAETAKHQAKCNICKECPIVGFRYRSLKHFNYDVCQSCFFSGRTAKGHKLHYPM  9345

Query  897    VEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET--------  948
              VEYC PTTSGEDVRDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDN+ET        
Sbjct  9346   VEYCIPTTSGEDVRDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNLETPITLISMW  9525

Query  949    -----PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYC  1003
                   P+ SPQL HDDTHSRIE YASRLA+ME +NGS+L DS S   S++DEH LIQ YC
Sbjct  9526   PEQYDPSQSPQLFHDDTHSRIEQYASRLAQMERTNGSFLTDSSSTTGSVEDEHALIQQYC  9705

Query  1004   QSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGL  1063
              Q+L  +SP+SQP+SPAQIL S+E EERGELERI+ADLEEE R+LQ EY++LK+QH  + +
Sbjct  9706   QTLGGESPVSQPQSPAQILKSVEREERGELERIIADLEEEQRSLQVEYEQLKEQHLRRAM  9885

Query  1064   SPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQL  1123
              SPL SPP+ +     +  D+ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQL
Sbjct  9886   SPLSSPPDSIAPPHHTAEDSELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQL  10065

Query  1124   LEQPQAEAKVNGTTV-SSP-----STSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQ  1177
              LEQP+++A++NG +  SSP       SL +  SSQP               ++DLL PP 
Sbjct  10066  LEQPESDARINGVSPWSSPQHSALGYSLDQDSSSQPF----------HCSAKDDLLVPPH  10215

Query  1178   DTSTGLEEVMEQLNNSFPS  1196
              +TST L +VMEQ++++FPS
Sbjct  10216  NTSTDLTDVMEQIHSTFPS  10272


 Score = 46.6 bits (109),  Expect = 0.094, Method: Compositional matrix adjust.
 Identities = 107/509 (21%), Positives = 214/509 (42%), Gaps = 68/509 (13%)
 Frame = +1

Query  7     LEVPALADFNRAWTELTDWLSLLDQVIKSQRVM-VGDLEDINEMIIKQKATMQDLEQRRP  65
             +++ A   F+   TEL +W+S  +  I++  +       D  +M  K K   ++  +R P
Sbjct  2053  VDLDAKKKFDAVSTELLNWISKSNSAIQAIDIKEYKKTRDTLDMKKKLKVLEKEQTERIP  2232

Query  66    QLEELITAAQNL-----KNKTSNQEARTIITDRIERIQNQWDEVQEHLQN--RRQQL---  115
             +L EL    QNL     K   S  + + ++    E++Q++W +V  +L++  R+ QL   
Sbjct  2233  KLNELKHRGQNLLEQMGKEGISADDVKKVL----EKVQSEWKDVVWNLEDVSRKIQLQDD  2400

Query  116   -NEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQ  174
              N   KD  +  +A +E E+ +  +     + + GP   D  Q ++T    L        
Sbjct  2401  INTFFKDLDELEKAIKEKEEWVENSSIADTTQQFGPNLKDTCQWELTHLLSLG-------  2559

Query  175   TNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQF  234
               +++ +   + L+   SA     +    E+    ++S+ + + E +  LE+    L+  
Sbjct  2560  PQIEMMSSSCMALMSQPSAPSF--IQKSLESFIDRYKSVQQNLEECQKQLEKD---LKSQ  2724

Query  235   PLD-----LEKFLAWLTEAET----TANVLQDATRKERLLEDSKGVKELMKQWQDLQGEI  285
             P D     L+     L E+E     + N L D +  E+ L++ + ++++++  + L G++
Sbjct  2725  PGDDYLQTLKTVKDVLNESENKTQISLNALNDLSEVEKALQEKRALEQILEDQKPLLGKL  2904

Query  286   EAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSD  345
             E  T           K L      D     +   +N+  KW  L+ +       LE    
Sbjct  2905  EEET-----------KTLEQGAPHDIKNKYRHEFENVQGKWDRLKARVSKDIHLLEEIIP  3051

Query  346   QWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMST  405
             + +      + +  W+    D L ++  I GD   +Q+Q D  R F  E++T +   +  
Sbjct  3052  KLRVFEADSKVIEKWINGVKDFLMKEQAIQGDSEGLQRQLDQCRVFVNEMETIDSS-LKE  3228

Query  406   LETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADW  465
             ++ +   L   P+ G++   Q              T L+  Q++     WEK +   A  
Sbjct  3229  MKEIESALRSHPVAGVKTWVQ--------------TILVDHQSQ-----WEKFSKQIAIQ  3351

Query  466   QRKIDETLERLQELQEATDELDLKLRQAE  494
             + K+ E+ E+   L++   E+   + QAE
Sbjct  3352  KNKLSESQEKAMNLKKDLAEMQEWMTQAE  3438


>ref|NM_007124.2| Homo sapiens utrophin (UTRN), mRNA
Length=12436

 Score = 1470 bits (3805),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 726/1209 (60%), Positives = 922/1209 (76%), Gaps = 31/1209 (2%)
 Frame = +3

Query  8      EVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQL  67
              E+   AD ++  TEL DWL L+DQ++KS  V VGD+E+IN+ + + K T  DLEQR PQL
Sbjct  6762   EISIPADLDKTITELADWLVLIDQMLKSNIVTVGDVEEINKTVSRMKITKADLEQRHPQL  6941

Query  68     EELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLE  127
              + + T AQNLKNK S+ + RT IT+++ER++NQWD  Q  ++ R+QQL +M+ DS QW +
Sbjct  6942   DYVFTLAQNLKNKASSSDMRTAITEKLERVKNQWDGTQHGVELRQQQLEDMIIDSLQWDD  7121

Query  128    AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
               +EE E+++ +  A+L   ++     D + K+I++ + L ++L      V   +++  KL
Sbjct  7122   HREETEELMRKYEARLYILQQARR--DPLTKQISDNQILLQELGPGDGIVMAFDNVLQKL  7295

Query  188    LRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTE  247
              L +Y +DDTR V   TE +  SW ++ + +++R+ ALE   R +Q    DLE FL W+ E
Sbjct  7296   LEEYGSDDTRNVKETTEYLKTSWINLKQSIADRQNALEAEWRTVQASRRDLENFLKWIQE  7475

Query  248    AETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLE  307
              AETT NVL DA+ +E  L+DS   +EL +Q QD+Q EI+AH D++ ++D N QK++++L 
Sbjct  7476   AETTVNVLVDASHRENALQDSILARELKQQMQDIQAEIDAHNDIFKSIDGNRQKMVKALG  7655

Query  308    GSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDE  367
               S++A +LQ RLD+MN +W++L+ KS +IR+HLEAS+++W RL +SL+EL+ WL +KD+E
Sbjct  7656   NSEEATMLQHRLDDMNQRWNDLKAKSASIRAHLEASAEKWNRLLMSLEELIKWLNMKDEE  7835

Query  368    LSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQE  427
              L +Q PIGGD PA+Q Q D  +A +RELK KE  +++ ++  R+FL +QP+E  E    E
Sbjct  7836   LKKQMPIGGDVPALQLQYDHCKALRRELKEKEYSVLNAVDQARVFLADQPIEAPE----E  8003

Query  428    PR-------ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              PR       EL PEERAQ + + +RKQ+ EV  +WE LN  +++WQ+++D+ LE+L++LQ
Sbjct  8004   PRRNLQSKTELTPEERAQKIAKAMRKQSSEVKEKWESLNAVTSNWQKQVDKALEKLRDLQ  8183

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
               A D+LD  +++AE ++  W+PVGDLLIDSLQDH+EK+ A R EIAP+   V  VNDL+ 
Sbjct  8184   GAMDDLDADMKEAESVRNGWKPVGDLLIDSLQDHIEKIMAFREEIAPINFKVKTVNDLSS  8363

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QL+ L +  S      L+DLN RWKLLQV+V+DR++QL EAHRDFGP+SQHFLSTSVQ P
Sbjct  8364   QLSPLDLHPSLKMSRQLDDLNMRWKLLQVSVDDRLKQLQEAHRDFGPSSQHFLSTSVQLP  8543

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              W+R+IS NKVPYYINH+TQTTCWDHPKMTEL+QSLADLNNVRFSAYRTA+K+RRLQKALC
Sbjct  8544   WQRSISHNKVPYYINHQTQTTCWDHPKMTELFQSLADLNNVRFSAYRTAIKIRRLQKALC  8723

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLL LS   +   QH L QNDQ + +  +INCLTT YD LEQ H +LVNVPLCVDMCLN
Sbjct  8724   LDLLELSTTNEIFKQHKLNQNDQLLSVPDVINCLTTTYDGLEQMHKDLVNVPLCVDMCLN  8903

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTG+IRV S K G++SL K  LE+KYRYLFK+VA  T  CDQR+LGLLLHD
Sbjct  8904   WLLNVYDTGRTGKIRVQSLKIGLMSLSKGLLEEKYRYLFKEVAGPTEMCDQRQLGLLLHD  9083

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              +IQIPRQLGEVA+FGGSNIEPSVRSCFQ  NNKPEI    F+DWM LEPQSMVWLPVLHR
Sbjct  9084   AIQIPRQLGEVAAFGGSNIEPSVRSCFQQNNNKPEISVKEFIDWMHLEPQSMVWLPVLHR  9263

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPI+GFRYRSLKHFNYD+CQSCFFSGR AKGHK+HYPMVEYC
Sbjct  9264   VAAAETAKHQAKCNICKECPIVGFRYRSLKHFNYDVCQSCFFSGRTAKGHKLHYPMVEYC  9443

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPAS---------  951
               PTTSGEDVRDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDN+ETP +         
Sbjct  9444   IPTTSGEDVRDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNLETPITLISMWPEHY  9623

Query  952    ----SPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
                  SPQL HDDTHSRIE YA+RLA+ME +NGS+L DS S   S++DEH LIQ YCQ+L 
Sbjct  9624   DPSQSPQLFHDDTHSRIEQYATRLAQMERTNGSFLTDSSSTTGSVEDEHALIQQYCQTLG  9803

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
               +SP+SQP+SPAQIL S+E EERGELERI+ADLEEE RNLQ EY++LK QH  +GL P+ 
Sbjct  9804   GESPVSQPQSPAQILKSVEREERGELERIIADLEEEQRNLQVEYEQLKDQHLRRGL-PVG  9980

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPE + +   +  D+ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  9981   SPPESIISPHHTSEDSELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  10160

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              ++++++NG    SP  S Q S  S  +     G Q   + G EDLL+PP DTST L EVM
Sbjct  10161  ESDSRINGV---SPWASPQHSALSYSLDPDASGPQFHQAAG-EDLLAPPHDTSTDLTEVM  10328

Query  1188   EQLNNSFPS  1196
              EQ++++FPS
Sbjct  10329  EQIHSTFPS  10355


 Score = 46.6 bits (109),  Expect = 0.084, Method: Compositional matrix adjust.
 Identities = 113/514 (21%), Positives = 219/514 (42%), Gaps = 78/514 (15%)
 Frame = +3

Query  7     LEVPALADFNRAWTELTDWLSLLDQVIKSQRVM-VGDLEDINEMIIKQKATMQDLEQRRP  65
             +++ A   F+    EL +W+      I++  +     ++D +EM  K KA  ++  +R P
Sbjct  2142  VDIEAKKKFDAISAELLNWILKWKTAIQTTEIKEYMKMQDTSEMKKKLKALEKEQRERIP  2321

Query  66    QLEELITAAQNLKNKTSNQEARTI-ITDRIERIQNQWDEVQEHLQN--RRQQLNEMLKDS  122
             + +EL    Q L  +   +   T  I + +E++ ++W  V +HL++  R+ QL E   D 
Sbjct  2322  RADELNQTGQILVEQMGKEGLPTEEIKNVLEKVSSEWKNVSQHLEDLERKIQLQE---DI  2492

Query  123   TQWLEAKEEAEQVLGQAR--AKLESWKEG-----PYTVDAIQKKITETKQLAKDLRQWQT  175
               + +  +E E+V+       K  S  E      P   D+ Q+++T       +L     
Sbjct  2493  NAYFKQLDELEKVIKTKEEWVKHTSISESSRQSLPSLKDSCQRELT-------NLLGLHP  2651

Query  176   NVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALE----------  225
              +++A      L+   SA D   V    ++    ++++ + V +R+  LE          
Sbjct  2652  KIEMARASCSALMSQPSAPDF--VQRGFDSFLGRYQAVQEAVEDRQQHLENELKGQPGHA  2825

Query  226   --ETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQG  283
               ET + L+    D E       +A+ + NVL D  + E+ L++ K + E++        
Sbjct  2826  YLETLKTLKDVLNDSE------NKAQVSLNVLNDLAKVEKALQEKKTLDEIL--------  2963

Query  284   EIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELR---KKSLNIRSHL  340
               E      H L E ++ + +++   D   L ++  D++  KW++L+    K L++   L
Sbjct  2964  --ENQKPALHKLAEETKALEKNVH-PDVEKLYKQEFDDVQGKWNKLKVLVSKDLHL---L  3125

Query  341   EASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEP  400
             E  +   +        +  W+    D L +Q    GD   +Q+Q D   AF  E++T E 
Sbjct  3126  EEIALTLRAFEADSTVIEKWMDGVKDFLMKQQAAQGDDAGLQRQLDQCSAFVNEIETIES  3305

Query  401   VIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNL  460
               +  ++ +   L   P+ G++   Q              TRL   Q     T+ EKL+ 
Sbjct  3306  S-LKNMKEIETNLRSGPVAGIKTWVQ--------------TRLGDYQ-----TQLEKLSK  3425

Query  461   HSADWQRKIDETLERLQELQEATDELDLKLRQAE  494
               A  + ++ E+ E+   L++   E+   + QAE
Sbjct  3426  EIATQKSRLSESQEKAANLKKDLAEMQEWMTQAE  3527


 Score = 45.8 bits (107),  Expect = 0.17, Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 8/156 (5%)
 Frame = +3

Query  206   INASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  265
             +NA W  I++  S+R+   +      +QF  DL     W+TEAE    +L D       L
Sbjct  5949  LNAKWDRINRMYSDRKGCFDRAMEEWRQFHCDLNDLTQWITEAE---ELLVDTCAPGGSL  6119

Query  266   EDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFK  325
             +  K         Q+L+  I +H   +  L+     I++ L  +D +  L+ +L  +N +
Sbjct  6120  DLEKA----RIHQQELEVGISSHQPSFAALNRTGDGIVQKLSQADGS-FLKEKLAGLNQR  6284

Query  326   WSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWL  361
             W  +  +  + +  L+  S Q  +    L E++ WL
Sbjct  6285  WDAIVAEVKDRQPRLKGESKQVMKYRHQLDEIICWL  6392


>emb|X69086.1| H.sapiens mRNA for utrophin
Length=10302

 Score = 1470 bits (3805),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 726/1209 (60%), Positives = 922/1209 (76%), Gaps = 31/1209 (2%)
 Frame = +1

Query  8      EVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQL  67
              E+   AD ++  TEL DWL L+DQ++KS  V VGD+E+IN+ + + K T  DLEQR PQL
Sbjct  6670   EISIPADLDKTITELADWLVLIDQMLKSNIVTVGDVEEINKTVSRMKITKADLEQRHPQL  6849

Query  68     EELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLE  127
              + + T AQNLKNK S+ + RT IT+++ER++NQWD  Q  ++ R+QQL +M+ DS QW +
Sbjct  6850   DYVFTLAQNLKNKASSSDMRTAITEKLERVKNQWDGTQHGVELRQQQLEDMIIDSLQWDD  7029

Query  128    AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
               +EE E+++ +  A+L   ++     D + K+I++ + L ++L      V   +++  KL
Sbjct  7030   HREETEELMRKYEARLYILQQARR--DPLTKQISDNQILLQELGPGDGIVMAFDNVLQKL  7203

Query  188    LRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTE  247
              L +Y +DDTR V   TE +  SW ++ + +++R+ ALE   R +Q    DLE FL W+ E
Sbjct  7204   LEEYGSDDTRNVKETTEYLKTSWINLKQSIADRQNALEAEWRTVQASRRDLENFLKWIQE  7383

Query  248    AETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLE  307
              AETT NVL DA+ +E  L+DS   +EL +Q QD+Q EI+AH D++ ++D N QK++++L 
Sbjct  7384   AETTVNVLVDASHRENALQDSILARELKQQMQDIQAEIDAHNDIFKSIDGNRQKMVKALG  7563

Query  308    GSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDE  367
               S++A +LQ RLD+MN +W++L+ KS +IR+HLEAS+++W RL +SL+EL+ WL +KD+E
Sbjct  7564   NSEEATMLQHRLDDMNQRWNDLKAKSASIRAHLEASAEKWNRLLMSLEELIKWLNMKDEE  7743

Query  368    LSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQE  427
              L +Q PIGGD PA+Q Q D  +A +RELK KE  +++ ++  R+FL +QP+E  E    E
Sbjct  7744   LKKQMPIGGDVPALQLQYDHCKALRRELKEKEYSVLNAVDQARVFLADQPIEAPE----E  7911

Query  428    PR-------ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              PR       EL PEERAQ + + +RKQ+ EV  +WE LN  +++WQ+++D+ LE+L++LQ
Sbjct  7912   PRRNLQSKTELTPEERAQKIAKAMRKQSSEVKEKWESLNAVTSNWQKQVDKALEKLRDLQ  8091

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
               A D+LD  +++AE ++  W+PVGDLLIDSLQDH+EK+ A R EIAP+   V  VNDL+ 
Sbjct  8092   GAMDDLDADMKEAESVRNGWKPVGDLLIDSLQDHIEKIMAFREEIAPINFKVKTVNDLSS  8271

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QL+ L +  S      L+DLN RWKLLQV+V+DR++QL EAHRDFGP+SQHFLSTSVQ P
Sbjct  8272   QLSPLDLHPSLKMSRQLDDLNMRWKLLQVSVDDRLKQLQEAHRDFGPSSQHFLSTSVQLP  8451

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              W+R+IS NKVPYYINH+TQTTCWDHPKMTEL+QSLADLNNVRFSAYRTA+K+RRLQKALC
Sbjct  8452   WQRSISHNKVPYYINHQTQTTCWDHPKMTELFQSLADLNNVRFSAYRTAIKIRRLQKALC  8631

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLL LS   +   QH L QNDQ + +  +INCLTT YD LEQ H +LVNVPLCVDMCLN
Sbjct  8632   LDLLELSTTNEIFKQHKLNQNDQLLSVPDVINCLTTTYDGLEQMHKDLVNVPLCVDMCLN  8811

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTG+IRV S K G++SL K  LE+KYRYLFK+VA  T  CDQR+LGLLLHD
Sbjct  8812   WLLNVYDTGRTGKIRVQSLKIGLMSLSKGLLEEKYRYLFKEVAGPTEMCDQRQLGLLLHD  8991

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              +IQIPRQLGEVA+FGGSNIEPSVRSCFQ  NNKPEI    F+DWM LEPQSMVWLPVLHR
Sbjct  8992   AIQIPRQLGEVAAFGGSNIEPSVRSCFQQNNNKPEISVKEFIDWMHLEPQSMVWLPVLHR  9171

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPI+GFRYRSLKHFNYD+CQSCFFSGR AKGHK+HYPMVEYC
Sbjct  9172   VAAAETAKHQAKCNICKECPIVGFRYRSLKHFNYDVCQSCFFSGRTAKGHKLHYPMVEYC  9351

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPAS---------  951
               PTTSGEDVRDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDN+ETP +         
Sbjct  9352   IPTTSGEDVRDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNLETPITLISMWPEHY  9531

Query  952    ----SPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
                  SPQL HDDTHSRIE YA+RLA+ME +NGS+L DS S   S++DEH LIQ YCQ+L 
Sbjct  9532   DPSQSPQLFHDDTHSRIEQYATRLAQMERTNGSFLTDSSSTTGSVEDEHALIQQYCQTLG  9711

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
               +SP+SQP+SPAQIL S+E EERGELERI+ADLEEE RNLQ EY++LK QH  +GL P+ 
Sbjct  9712   GESPVSQPQSPAQILKSVEREERGELERIIADLEEEQRNLQVEYEQLKDQHLRRGL-PVG  9888

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPE + +   +  D+ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  9889   SPPESIISPHHTSEDSELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  10068

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              ++++++NG    SP  S Q S  S  +     G Q   + G EDLL+PP DTST L EVM
Sbjct  10069  ESDSRINGV---SPWASPQHSALSYSLDPDASGPQFHQAAG-EDLLAPPHDTSTDLTEVM  10236

Query  1188   EQLNNSFPS  1196
              EQ++++FPS
Sbjct  10237  EQIHSTFPS  10263


 Score = 46.6 bits (109),  Expect = 0.083, Method: Compositional matrix adjust.
 Identities = 113/514 (21%), Positives = 219/514 (42%), Gaps = 78/514 (15%)
 Frame = +1

Query  7     LEVPALADFNRAWTELTDWLSLLDQVIKSQRVM-VGDLEDINEMIIKQKATMQDLEQRRP  65
             +++ A   F+    EL +W+      I++  +     ++D +EM  K KA  ++  +R P
Sbjct  2050  VDIEAKKKFDAISAELLNWILKWKTAIQTTEIKEYMKMQDTSEMKKKLKALEKEQRERIP  2229

Query  66    QLEELITAAQNLKNKTSNQEARTI-ITDRIERIQNQWDEVQEHLQN--RRQQLNEMLKDS  122
             + +EL    Q L  +   +   T  I + +E++ ++W  V +HL++  R+ QL E   D 
Sbjct  2230  RADELNQTGQILVEQMGKEGLPTEEIKNVLEKVSSEWKNVSQHLEDLERKIQLQE---DI  2400

Query  123   TQWLEAKEEAEQVLGQAR--AKLESWKEG-----PYTVDAIQKKITETKQLAKDLRQWQT  175
               + +  +E E+V+       K  S  E      P   D+ Q+++T       +L     
Sbjct  2401  NAYFKQLDELEKVIKTKEEWVKHTSISESSRQSLPSLKDSCQRELT-------NLLGLHP  2559

Query  176   NVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALE----------  225
              +++A      L+   SA D   V    ++    ++++ + V +R+  LE          
Sbjct  2560  KIEMARASCSALMSQPSAPDF--VQRGFDSFLGRYQAVQEAVEDRQQHLENELKGQPGHA  2733

Query  226   --ETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQG  283
               ET + L+    D E       +A+ + NVL D  + E+ L++ K + E++        
Sbjct  2734  YLETLKTLKDVLNDSE------NKAQVSLNVLNDLAKVEKALQEKKTLDEIL--------  2871

Query  284   EIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELR---KKSLNIRSHL  340
               E      H L E ++ + +++   D   L ++  D++  KW++L+    K L++   L
Sbjct  2872  --ENQKPALHKLAEETKALEKNVH-PDVEKLYKQEFDDVQGKWNKLKVLVSKDLHL---L  3033

Query  341   EASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEP  400
             E  +   +        +  W+    D L +Q    GD   +Q+Q D   AF  E++T E 
Sbjct  3034  EEIALTLRAFEADSTVIEKWMDGVKDFLMKQQAAQGDDAGLQRQLDQCSAFVNEIETIES  3213

Query  401   VIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNL  460
               +  ++ +   L   P+ G++   Q              TRL   Q     T+ EKL+ 
Sbjct  3214  S-LKNMKEIETNLRSGPVAGIKTWVQ--------------TRLGDYQ-----TQLEKLSK  3333

Query  461   HSADWQRKIDETLERLQELQEATDELDLKLRQAE  494
               A  + ++ E+ E+   L++   E+   + QAE
Sbjct  3334  EIATQKSRLSESQEKAANLKKDLAEMQEWMTQAE  3435


 Score = 45.8 bits (107),  Expect = 0.17, Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 8/156 (5%)
 Frame = +1

Query  206   INASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  265
             +NA W  I++  S+R+   +      +QF  DL     W+TEAE    +L D       L
Sbjct  5857  LNAKWDRINRMYSDRKGCFDRAMEEWRQFHCDLNDLTQWITEAE---ELLVDTCAPGGSL  6027

Query  266   EDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFK  325
             +  K         Q+L+  I +H   +  L+     I++ L  +D +  L+ +L  +N +
Sbjct  6028  DLEKA----RIHQQELEVGISSHQPSFAALNRTGDGIVQKLSQADGS-FLKEKLAGLNQR  6192

Query  326   WSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWL  361
             W  +  +  + +  L+  S Q  +    L E++ WL
Sbjct  6193  WDAIVAEVKDRQPRLKGESKQVMKYRHQLDEIICWL  6300


>ref|XM_001788161.1| PREDICTED: Bos taurus similar to putative utrophin (LOC534358), 
mRNA
Length=11203

 Score = 1467 bits (3798),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 722/1219 (59%), Positives = 926/1219 (75%), Gaps = 36/1219 (2%)
 Frame = +1

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
              +PS    E+   AD ++  TEL DWL L+DQ++KS  V VGD+E+IN+ I + K T  DL
Sbjct  6901   VPSPRASEISVPADLDKTITELADWLVLIDQMLKSNIVTVGDVEEINKTISRMKITKADL  7080

Query  61     EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
              EQR PQL+ + T AQNLKNK S+ + RT IT+++E+++NQWD  Q  ++ RRQQL +M+ 
Sbjct  7081   EQRHPQLDYVFTLAQNLKNKASSSDVRTAITEKLEKVKNQWDNTQHGVELRRQQLEDMII  7260

Query  121    DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              DS QW + +EE E+++ +  A+L   ++     D + K+I++++ L ++L      V   
Sbjct  7261   DSLQWDDHREETEELMRKYEARLYILQQARR--DPLVKQISDSQMLLQELAAGDGVVMAF  7434

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              +++  KLL +Y +DDTR V   TE +  SW ++ + +++R++ALE   R +Q    DLE 
Sbjct  7435   DNVLQKLLEEYGSDDTRNVKETTEYLKTSWINLKQSIADRQSALEAELRTVQSSRKDLEN  7614

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              FL W+ EAETT NVL DA+++E  L+D+   +EL +Q QD+Q EI+AH D++ ++D N Q
Sbjct  7615   FLKWIQEAETTVNVLADASQRENALQDTVLARELTQQMQDIQAEIDAHNDIFKSIDGNRQ  7794

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
              K++++L  S++A +LQ RLD+MN +W++L+ KS +IR+HLEAS+++W RL  SL+EL+ W
Sbjct  7795   KMVKALGNSEEATMLQHRLDDMNQRWNDLKAKSASIRAHLEASAEKWNRLLTSLEELIKW  7974

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              L +KD+EL +Q P+GGD PA+Q Q D  +A +RELK KE  +++ ++  R+FL +QP+E 
Sbjct  7975   LNMKDEELKKQMPVGGDVPALQLQYDHCKALRRELKEKEYSVLNAIDQARVFLADQPIEA  8154

Query  421    LEKLYQEPR-------ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETL  473
               E    EPR       EL PEE+AQ + + +RKQ+ EV  +WE LN  ++ WQ+++D+ L
Sbjct  8155   PE----EPRRNLQSKTELTPEEKAQKIAKAMRKQSSEVKEKWETLNAVTSSWQKQVDKAL  8322

Query  474    ERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVS  533
              E+L++LQ A D+LD  L++AE ++  W+PVGDLLIDSLQDH+EK  A R EIAP+   V 
Sbjct  8323   EKLRDLQGAMDDLDADLKEAEAVRNGWKPVGDLLIDSLQDHIEKTMAFREEIAPINLKVK  8502

Query  534    HVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFL  593
               +NDL+ QL+ L +  S      L+DLN RWKLLQV+V+DR++QL EAHRDFGP+SQHFL
Sbjct  8503   TMNDLSSQLSPLDLHPSLKMSRQLDDLNMRWKLLQVSVDDRLKQLQEAHRDFGPSSQHFL  8682

Query  594    STSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLR  653
              STSVQ PW+R+IS NKVPYYINH+TQTTCWDHPKMTEL+QSLADLNNVRFSAYRTA+K+R
Sbjct  8683   STSVQLPWQRSISHNKVPYYINHQTQTTCWDHPKMTELFQSLADLNNVRFSAYRTAIKIR  8862

Query  654    RLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPL  713
              RLQKALCLDLL L+   +  +QH L QNDQ + +  +INCLTT YD LEQ H NLVNVPL
Sbjct  8863   RLQKALCLDLLELNTTNEVFEQHKLNQNDQLLSVPDVINCLTTTYDGLEQMHKNLVNVPL  9042

Query  714    CVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRR  773
              CVDMCLNWLLNVYDTGRTG+IRV S K G+I+L K  LE+KYRYLFK+VA  T  CDQR+
Sbjct  9043   CVDMCLNWLLNVYDTGRTGKIRVQSLKIGLIALSKGLLEEKYRYLFKEVAGPTEMCDQRQ  9222

Query  774    LGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMV  833
              LGLLLHD+IQIPRQLGEVA+FGGSNIEPSVRSCFQ  NNKPEI    F+DWMRLEPQSMV
Sbjct  9223   LGLLLHDAIQIPRQLGEVAAFGGSNIEPSVRSCFQQNNNKPEISVKEFIDWMRLEPQSMV  9402

Query  834    WLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMH  893
              WLPVLHRVAAAETAKHQAKCNICKECPI+GFRYRSLKHFNYD+CQSCFFSGR AKGHK+H
Sbjct  9403   WLPVLHRVAAAETAKHQAKCNICKECPIVGFRYRSLKHFNYDVCQSCFFSGRTAKGHKLH  9582

Query  894    YPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPAS--  951
              YPMVEYC PTTSGEDVRDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDN+ETP +  
Sbjct  9583   YPMVEYCIPTTSGEDVRDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNLETPITLI  9762

Query  952    -----------SPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQ  1000
                         SPQL HDDTHSRIE YA+RLA+ME +NGS+L DS S   S++DEH LIQ
Sbjct  9763   SMWPEHYDPSQSPQLFHDDTHSRIEQYATRLAQMERTNGSFLTDSSSTTGSVEDEHALIQ  9942

Query  1001   HYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEH  1060
               YCQ+L  +SP+SQP+SPAQIL S+E EERGELERI+ADLEEE RNLQ EY++LK+QH  
Sbjct  9943   QYCQTLGGESPVSQPQSPAQILKSVEREERGELERIIADLEEEQRNLQVEYEQLKEQHLR  10122

Query  1061   KGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRL  1120
              +GL P+ SPP+ + +   +  D+ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRL
Sbjct  10123  RGL-PVGSPPDSVVSPHHTSEDSELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRL  10299

Query  1121   RQLLEQPQAEAKVNGTT--VSSPSTSLQRSDSSQPMLLRVVGSQTSDS-MGEEDLLSPPQ  1177
              RQLLEQP++++++NG +   S   ++L  S    P      G Q   +    E+ L+PP 
Sbjct  10300  RQLLEQPESDSQINGVSPWASPQQSALNYSLDPDP------GPQFHQAGTAAEESLAPPH  10461

Query  1178   DTSTGLEEVMEQLNNSFPS  1196
              DTST L EVMEQ+N++FPS
Sbjct  10462  DTSTDLTEVMEQINSTFPS  10518


 Score = 43.1 bits (100),  Expect = 1.1, Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 8/156 (5%)
 Frame = +1

Query  206   INASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  265
             +NA W  I++  ++R+   +      +QF  DL     W+TEAE    +L      +  L
Sbjct  6109  LNAKWDRINRMYNDRKGYFDRAVEEWRQFHCDLNDLTHWITEAE---ELLAGTFAPDGGL  6279

Query  266   EDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFK  325
             +  K         Q+L+  I +H   +  L+     I++ L  +D +  L+ +L  +N +
Sbjct  6280  DLEKA----RIHQQELEEGISSHQPSFAALNRTGDGIIQKLSPTDGS-FLKDKLAGLNQR  6444

Query  326   WSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWL  361
             W  +  +  + R  L+  S Q       L E++ WL
Sbjct  6445  WGAITAEVKDRRPRLKGESKQVMDYRKRLDEIICWL  6552


>emb|AJ002967.1| Rattus norvegicus mRNA for utrophin
Length=10705

 Score = 1467 bits (3797),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 714/1207 (59%), Positives = 914/1207 (75%), Gaps = 28/1207 (2%)
 Frame = +3

Query  8      EVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQL  67
              E+   AD ++  TEL DWL L+DQ++KS  V VGD+++IN+ + + K T  DLEQR PQL
Sbjct  6819   EISVPADLDKTITELADWLVLIDQMLKSNIVTVGDVKEINKTVSRMKITKADLEQRHPQL  6998

Query  68     EELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLE  127
              + + T AQNLKNK S+ + RT IT ++E+++ QW+  Q  ++ RRQQL +M+ DS QW +
Sbjct  6999   DFVFTLAQNLKNKASSSDLRTAITGKLEKLKTQWESTQHGVELRRQQLEDMVVDSLQWDD  7178

Query  128    AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
               +EE E+++ +  A+    ++     D + K++++ + L ++L      +   +++  KL
Sbjct  7179   HREETEELMRKHEARFYMLQQARR--DPLSKQVSDNQLLLQELGSGDGVIMAFDNVLQKL  7352

Query  188    LRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTE  247
              L +YS+DDTR V   TE +  SW ++ + +++R++ALE   R +Q    DLE F+ WL E
Sbjct  7353   LEEYSSDDTRNVEETTEYLKTSWINLKQSIADRQSALEAELRTVQTSRRDLENFVKWLQE  7532

Query  248    AETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLE  307
              AETTANVL DA+++E  L+DS   ++L +Q  D+Q EI+AH D++ ++D N QK++++L 
Sbjct  7533   AETTANVLADASQRENALQDSVLARQLRQQMLDIQAEIDAHNDIFKSIDGNRQKMVKALG  7712

Query  308    GSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDE  367
               S++A +LQ RLD+MN +W++L+ KS +IR+HLEAS+++W RL  SL+EL+ WL +KD+E
Sbjct  7713   NSEEATMLQHRLDDMNQRWNDLKAKSASIRAHLEASAEKWNRLLASLEELIKWLNMKDEE  7892

Query  368    LSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQE  427
              L +Q PIGGD PA+Q Q D  +  +RELK KE  +++ ++  R+FL +QP+E  E+  + 
Sbjct  7893   LKKQMPIGGDVPALQLQYDHCKVLRRELKEKEYSVLNAVDQARVFLADQPIEAPEEPRRN  8072

Query  428    PR---ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATD  484
              P+   EL PEERAQ + + +RKQ+ EV  +WE LN  ++ WQ+++ + LE+L++LQ A D
Sbjct  8073   PQSKTELTPEERAQKIAKAMRKQSSEVREKWESLNAVTSTWQKQVGKALEKLRDLQGAVD  8252

Query  485    ELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTT  544
              +LD  +++ E ++  W+PVGDLLIDSLQDH+EK  A R EIAP+   V  +NDL+ QL+ 
Sbjct  8253   DLDADMKEVEAVRNGWKPVGDLLIDSLQDHIEKTLAFREEIAPINLKVKTMNDLSSQLSP  8432

Query  545    LGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERA  604
              L +  SP     L+DLN RWKLLQV+VEDR++QL EAHRDFGP SQHFLSTSVQ PW+R+
Sbjct  8433   LDLHPSPKMSRQLDDLNMRWKLLQVSVEDRLKQLQEAHRDFGPCSQHFLSTSVQLPWQRS  8612

Query  605    ISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLL  664
              IS NKVPYYINH+TQTTCWDHPKMTEL+QSL DLNNVRFSAYRTA+K+RRLQKALCLDLL
Sbjct  8613   ISHNKVPYYINHQTQTTCWDHPKMTELFQSLGDLNNVRFSAYRTAIKIRRLQKALCLDLL  8792

Query  665    SLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLN  724
               L+   +   QH L QNDQ + +  +INCLTT YD LEQ H +LVNVPLCVDMCLNWLLN
Sbjct  8793   ELNTTNEVFKQHKLNQNDQLLSVPDVINCLTTTYDGLEQLHKDLVNVPLCVDMCLNWLLN  8972

Query  725    VYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQI  784
              VYDTGRTG+IRV S K G++SL K  LE+KYR LFK+VA  T  CDQR+LGLLLHD+IQI
Sbjct  8973   VYDTGRTGKIRVQSLKIGLMSLSKGLLEEKYRCLFKEVAGPTEMCDQRQLGLLLHDAIQI  9152

Query  785    PRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAA  844
              PRQLGEVA+FGGSNIEPSVRSCFQ  NNKPEI    F+DWMRLEPQSMVWLPVLHRVAAA
Sbjct  9153   PRQLGEVAAFGGSNIEPSVRSCFQQNNNKPEISVKEFIDWMRLEPQSMVWLPVLHRVAAA  9332

Query  845    ETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTT  904
              ETAKHQAKCNICKECPI+GFRYRSLKHFNYD+CQSCFFSGR AKGHK+HYPMVEYC PTT
Sbjct  9333   ETAKHQAKCNICKECPIVGFRYRSLKHFNYDVCQSCFFSGRTAKGHKLHYPMVEYCIPTT  9512

Query  905    SGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPAS-------------  951
              SGEDVRDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDN+ETP +             
Sbjct  9513   SGEDVRDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNLETPITLISMWPEHYDPSQ  9692

Query  952    SPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSP  1011
              SPQL HDDTHSRIE YA+RLA+ME +NGS+L DS S   S++DEH LIQ YCQ+L  +SP
Sbjct  9693   SPQLFHDDTHSRIEQYATRLAQMERTNGSFLTDSSSTTGSVEDEHALIQQYCQTLGGESP  9872

Query  1012   LSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPE  1071
              +SQP+SPAQIL S+E EERGELERI+ADLEEE RNLQ EY++LK+QH  +GL PL SPP+
Sbjct  9873   VSQPQSPAQILKSVEKEERGELERIIADLEEEQRNLQVEYEQLKEQHLRRGL-PLGSPPD  10049

Query  1072   MMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEA  1131
               + +   +  D+ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP +++
Sbjct  10050  SIVSPHHTSEDSELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPDSDS  10229

Query  1132   KVNGTT--VSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQ  1189
              ++NG +   S    SL  S    P      G Q S     EDLL+PP DTST L +VMEQ
Sbjct  10230  RINGVSPWASPQHPSLSYSLDPDP------GPQ-SHQAASEDLLAPPHDTSTDLTDVMEQ  10388

Query  1190   LNNSFPS  1196
              LN++FPS
Sbjct  10389  LNSTFPS  10409


 Score = 46.6 bits (109),  Expect = 0.085, Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 74/156 (47%), Gaps = 8/156 (5%)
 Frame = +3

Query  206   INASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  265
             +NA W  +++  S+R  +        +QF  DL+    WL+EAE   ++L      +  L
Sbjct  6015  LNAKWDRVNRLYSDRRGSFARAVEEWKQFHCDLDDLTQWLSEAE---DLLVGTCAPDGSL  6185

Query  266   EDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFK  325
             +  K     +    +L+  + +H     ++++  + I++ L  SD A  L+ +L ++N +
Sbjct  6186  DLEKARTHQL----ELEDGLSSHQPCLIDVNQKGEDIVQRLRPSD-ASFLKDKLASLNQR  6350

Query  326   WSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWL  361
             WS L  +  +++  L+  S Q       L E++ WL
Sbjct  6351  WSALVAEVKDLQPRLKGESKQVSGYRKRLDEVVCWL  6458


>ref|XR_010548.1| PREDICTED: Macaca mulatta utrophin (UTRN), mRNA
Length=12319

 Score = 1459 bits (3778),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 724/1209 (59%), Positives = 922/1209 (76%), Gaps = 31/1209 (2%)
 Frame = +2

Query  8      EVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQL  67
              E+   AD ++  TEL DWL L+DQ++KS  V VGD+E+IN+ + + K T  DLEQR PQL
Sbjct  6674   EISIPADLDKTITELADWLVLIDQMLKSNIVTVGDVEEINKTVSRMKITKADLEQRHPQL  6853

Query  68     EELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLE  127
              + + T AQNLKNK S+ + RT IT+++ER++NQWD  Q  ++ R+QQL +M+ DS QW +
Sbjct  6854   DYVFTLAQNLKNKASSSDVRTAITEKLERVKNQWDGTQHGVELRQQQLEDMIIDSLQWDD  7033

Query  128    AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
               +EE E+++ +  A+L   ++     D + K+I++ + L ++L      V   +++  KL
Sbjct  7034   HREETEELMRKHEARLYILQQSRR--DPLTKQISDNQILLQELGPGDGIVMAFDNILQKL  7207

Query  188    LRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTE  247
              L +Y  DDTR V   TE +  SW ++ + +++R+ ALE   R +Q    DLE FL W+ E
Sbjct  7208   LEEYGNDDTRNVKETTEYLKTSWINLKQSIADRQNALEAEWRTVQASRGDLENFLKWIQE  7387

Query  248    AETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLE  307
              AETT NVL DA+ +E  L+DS   +EL +Q QD+Q EI+AH D++ ++D N QK++++L 
Sbjct  7388   AETTVNVLADASHRENALQDSILARELKQQMQDIQAEIDAHNDIFKSIDGNRQKMVKALG  7567

Query  308    GSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDE  367
               S++A +LQ RLD+MN +W++L+ KS +IR+HLEAS+++W RL +SL+EL+ WL +KD+E
Sbjct  7568   NSEEATMLQHRLDDMNQRWNDLKAKSASIRAHLEASAEKWNRLLMSLEELIKWLNMKDEE  7747

Query  368    LSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQE  427
              L +Q PIGGD PA+Q Q D  +A +RELK KE  +++ ++  R+FL +QP+E  E    E
Sbjct  7748   LKKQMPIGGDVPALQLQYDHCKALRRELKEKEHSVLNAVDQARVFLADQPIEAPE----E  7915

Query  428    PR-------ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              PR       EL PEE+AQ + + +RKQ+ EV  +WE LN  +++WQ+++D+ LE+L++LQ
Sbjct  7916   PRRNLQSKTELTPEEKAQKIAKAMRKQSSEVKEKWESLNAVTSNWQKQVDKALEKLRDLQ  8095

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
               A D+LD  +++AE ++  W+PVGDLLIDSLQDH+EK+ A R EIAP+   V  VNDL+ 
Sbjct  8096   GAMDDLDADMKEAESVRNGWKPVGDLLIDSLQDHIEKIMAFREEIAPINLKVKTVNDLSS  8275

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QL+ L +  S      L+DLN RWKLLQV+V+DR++QL EAHRDFGP+SQHFLSTSVQ P
Sbjct  8276   QLSPLDLHPSLKMSRQLDDLNMRWKLLQVSVDDRLKQLQEAHRDFGPSSQHFLSTSVQLP  8455

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              W+R+IS NKVPYYINH+TQTTCWDHPKMTEL+QSLADLNNVRFSAYRTA+K+RRLQKALC
Sbjct  8456   WQRSISHNKVPYYINHQTQTTCWDHPKMTELFQSLADLNNVRFSAYRTAIKIRRLQKALC  8635

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLL LS   +   QH L QNDQ + +  +INCLTT YD LEQ H +LVNVPLCVDMCLN
Sbjct  8636   LDLLELSTTNEIFKQHKLNQNDQLLSVPDVINCLTTTYDGLEQMHKDLVNVPLCVDMCLN  8815

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTG+IRV S K G++SL K  LE+KYRYLFK+VA  T  CDQR+LGLLLHD
Sbjct  8816   WLLNVYDTGRTGKIRVQSLKIGLMSLSKGLLEEKYRYLFKEVAGPTEMCDQRQLGLLLHD  8995

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              +IQIPRQLGEVA+FGGSNIEPSVRSCFQ  NNKPEI    F+DWMRLEPQSMVWLPVLHR
Sbjct  8996   AIQIPRQLGEVAAFGGSNIEPSVRSCFQQNNNKPEISVKEFIDWMRLEPQSMVWLPVLHR  9175

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPI+GFRYRSLKHFNYD+CQSCFFSGR AKGHK+HYPMVEYC
Sbjct  9176   VAAAETAKHQAKCNICKECPIVGFRYRSLKHFNYDVCQSCFFSGRTAKGHKLHYPMVEYC  9355

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPAS---------  951
               PTTSGEDVRDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDN+ETP +         
Sbjct  9356   IPTTSGEDVRDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNLETPITLISMWPEHY  9535

Query  952    ----SPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
                  SPQL ++DTHSRIE YA+RLA+ME +NGS+L DS S   S++DEH LIQ YCQ+L 
Sbjct  9536   DPSQSPQLFYEDTHSRIEQYATRLAQMERTNGSFLTDSSSTTGSVEDEHALIQQYCQTLG  9715

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
               +SP+SQP+SPAQIL S+E EERGELERI+ADLEEE RNLQ EY++LK QH  +G  P+ 
Sbjct  9716   GESPVSQPQSPAQILKSVEREERGELERIIADLEEEQRNLQVEYEQLKDQHLRRGF-PVG  9892

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPPE + +   +  D+ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  9893   SPPESIVSPHHTSEDSELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  10072

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
              +++ ++NG    SP  S Q S  S  + L   G+Q   + G EDLL+PP DTST L EVM
Sbjct  10073  ESDTRINGV---SPWASPQHSALSYSLDLDASGAQFHQAAG-EDLLAPPHDTSTDLTEVM  10240

Query  1188   EQLNNSFPS  1196
              EQ++++FPS
Sbjct  10241  EQIHSTFPS  10267


 Score = 42.4 bits (98),  Expect = 1.5, Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
 Frame = +2

Query  206   INASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  265
             +NA W  I++  S+R+   +      +QF  DL     W+TEAE    +L D       L
Sbjct  5861  LNAKWDRINRMYSDRKGYFDRAMEEWRQFHCDLNDLTQWITEAE---ELLVDTCAPGGSL  6031

Query  266   EDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFK  325
             +  K         Q+L+  I +H   +  L+     I++ L  +D +  L+ +L  +N +
Sbjct  6032  DLEKA----RIHQQELEEGISSHRPSFAALNRTGDGIVQKLSQADGS-FLKDKLAGLNQR  6196

Query  326   WSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWL  361
             W  +  +  + +  L+  S Q       L  ++ WL
Sbjct  6197  WDAIIAEVKDRQPRLKGESKQVMEYRHQLDGIICWL  6304


 Score = 42.0 bits (97),  Expect = 2.0, Method: Compositional matrix adjust.
 Identities = 112/518 (21%), Positives = 224/518 (43%), Gaps = 86/518 (16%)
 Frame = +1

Query  7     LEVPALADFNRAWTELTDWLSLLDQVIKSQRVM-VGDLEDINEMIIKQKATMQDLEQRRP  65
             +++ A   F+    EL +W+      I++  +     ++D +EM  K KA  ++  +R P
Sbjct  2050  VDIEAKKKFDAVSAELLNWILKSKPAIQTTEIKEYMKMQDTSEMKKKLKALEKEQRERIP  2229

Query  66    QLEELITAAQNLKNKTSNQEARTI-ITDRIERIQNQWDEVQEHLQN--RRQQLNEMLKDS  122
             + +EL    Q L  +   +   T  I + +E++ ++W  V +HL++  R+ QL E   D 
Sbjct  2230  RADELNQTGQILVEQMGKEGLPTEEIKNVLEKVLSEWKNVSQHLKDLERKIQLQE---DI  2400

Query  123   TQWLEAKEEAEQVLGQARAKLE-------SWKEGPYTVDAIQKKITETKQLAKDLRQWQT  175
               + +  +E E+V+      ++       SW+  P   D+ Q+++T       +L     
Sbjct  2401  NAYFKQLDELEKVIKTKEEWVKHTSVSESSWQSLPSLKDSCQRELT-------NLLGLHP  2559

Query  176   NVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEE------THR  229
              +++A      L    SA D   V    ++    ++++ + + +R+  LE        H 
Sbjct  2560  KIEMARASCSALKSQPSAPDF--VQRGFDSFLGRYQAVQQALKDRQQQLENELKGQPGHA  2733

Query  230   LLQQFPLDLEKFLAWLTE--AETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEA  287
              L+   L   KF+   +E  A+T+ +VL D  + E+ L++ K + E++          E 
Sbjct  2734  YLE--TLKTLKFVLNDSENKAQTSLSVLDDPAKVEKALQEKKALDEIL----------EN  2877

Query  288   HTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELR-----------KKSLNI  336
                  H L E ++ + +++   D   L ++  D++  KW++L+           + +L +
Sbjct  2878  QKPTLHKLAEETKALEKNVH-PDVEKLYKQEFDDVQGKWNKLKVLVSKDLHLLEEITLKL  3054

Query  337   RSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELK  396
             R+  EA S   +R          W+    D L +Q    G+   +Q+Q D   AF  E++
Sbjct  3055  RA-FEADSTVIER----------WMDGVKDFLMKQQAARGNNADLQRQLDQCSAFVNEIE  3201

Query  397   TKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWE  456
             T E   +  ++ +   L   P+ G++   Q              TRL      +  T+ E
Sbjct  3202  TIESS-LKNMKEIETNLRSGPIAGIKTWVQ--------------TRL-----SDYQTQLE  3321

Query  457   KLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAE  494
             KL+   A  + ++ E+ E+   L++   E+   + QAE
Sbjct  3322  KLSKEIATQKSRLSESQEKAANLKKDLAEMQEWMTQAE  3435


>gb|AY095485.1| Canis familiaris utrophin mRNA, complete cds
Length=10299

 Score = 1457 bits (3773),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 719/1216 (59%), Positives = 919/1216 (75%), Gaps = 46/1216 (3%)
 Frame = +1

Query  8      EVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQL  67
              E+   AD ++  TEL DWL L+DQ++KS  V VGD+E+IN+ + + K T  DLEQR PQL
Sbjct  6670   EISIPADLDKTITELADWLVLIDQMLKSNIVTVGDIEEINKTVSRMKITKSDLEQRHPQL  6849

Query  68     EELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLE  127
              + + T AQNLKNK S+ + RT IT+++E+++NQWD  Q  ++ R+QQL +M+ DS QW +
Sbjct  6850   DYVFTLAQNLKNKASSSDVRTAITEKLEKVKNQWDSTQHGVELRQQQLEDMIIDSIQWDD  7029

Query  128    AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
               KEE E+++ +  A+L   ++     D + K+I++ + L ++L      +   +++  KL
Sbjct  7030   HKEETEELMRKYEARLYILQQARR--DPLIKQISDNQILLQELGPGDGIIMAFDNVLQKL  7203

Query  188    LRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTE  247
              L +Y +DDTR V   TE +  SW ++ + +++R+ ALE   R +Q    DLE FL W+ E
Sbjct  7204   LEEYGSDDTRNVKETTEYLKTSWINLKQSITDRQCALEAELRAVQASRRDLENFLKWIQE  7383

Query  248    AETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLE  307
              AETT NVL DA+++E  L+D+   +EL +Q QD+Q EI+AH D++ ++D N QK++++L 
Sbjct  7384   AETTVNVLADASQRENALQDTLLARELTQQMQDIQAEIDAHNDIFKSIDGNRQKMVKALG  7563

Query  308    GSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDE  367
               S++A +LQ RLD+MN +W++L+ KS +IR+HLEAS+++W RL  SL+EL+ WL +KD+E
Sbjct  7564   NSEEATMLQHRLDDMNQRWNDLKAKSASIRAHLEASAEKWNRLLTSLEELIKWLNIKDEE  7743

Query  368    LSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQE  427
              L  Q PIGGD PA+Q Q D  +A +RELK KE  +++ ++  R+FL +QP+E  E    E
Sbjct  7744   LQNQMPIGGDVPALQLQYDHCKALRRELKEKEYSVLNAIDQARVFLADQPIEAPE----E  7911

Query  428    PR-------ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              PR       EL PEERAQ + + +RKQ+ EV  +WE LN  +++WQ+++D+ LE+L++LQ
Sbjct  7912   PRRDLQSKTELTPEERAQKIAKAMRKQSSEVKEKWESLNAVTSNWQKQVDKALEKLRDLQ  8091

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
               A D+LD+ +++AE ++  W+PVGDLLIDSLQDH+EK  A R EIAP+   V  VNDL+ 
Sbjct  8092   GAMDDLDVDMKEAEAVRNGWKPVGDLLIDSLQDHIEKTMAFREEIAPINLKVKTVNDLSS  8271

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QL+ L +  S      L+DLN RWKLLQV+V+DR++QL EAHRD GP+SQHFLSTSVQ P
Sbjct  8272   QLSPLDLHPSLKMSRQLDDLNMRWKLLQVSVDDRLKQLQEAHRDLGPSSQHFLSTSVQLP  8451

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              W+R+IS NKVPYYINH+TQTTCWDHPKMTEL+QSLADLNNVRFSAYRTA+K+RRLQKALC
Sbjct  8452   WQRSISHNKVPYYINHQTQTTCWDHPKMTELFQSLADLNNVRFSAYRTAIKIRRLQKALC  8631

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLL L+   +   QH L QNDQ + +  +INCLTT YD LEQ H +LVNVPLCVDMCLN
Sbjct  8632   LDLLELNTTNEVFKQHKLNQNDQLLSVPDVINCLTTTYDGLEQMHMDLVNVPLCVDMCLN  8811

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTG+IRV S K G++SL K  LE+KYRYLFK+VA  T  CDQR+LGLLLHD
Sbjct  8812   WLLNVYDTGRTGKIRVQSLKIGLMSLSKGLLEEKYRYLFKEVAGPTEMCDQRQLGLLLHD  8991

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              +IQIPRQLGEVA+FGGSNIEPSVRSCFQ  NNKPEI    F+DWMRLEPQSMVWLPVLHR
Sbjct  8992   AIQIPRQLGEVAAFGGSNIEPSVRSCFQQNNNKPEISVKDFIDWMRLEPQSMVWLPVLHR  9171

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPI+GFRYRSLKHFNYD+CQSCFFSGR AKGHK+HYPMVEYC
Sbjct  9172   VAAAETAKHQAKCNICKECPIVGFRYRSLKHFNYDVCQSCFFSGRTAKGHKLHYPMVEYC  9351

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPAS---------  951
               PTT GEDVRDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDN+ETP +         
Sbjct  9352   IPTTPGEDVRDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNLETPVTLISMWPEHY  9531

Query  952    ----SPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
                  SPQL HDDTHSRIE YA+RLA+ME +NGS++ DS S   S++DEH LIQ YCQ+L 
Sbjct  9532   DPSQSPQLFHDDTHSRIEQYATRLAQMERTNGSFVTDSSSTTGSVEDEHALIQQYCQTLG  9711

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
               +SP+SQP+SPAQIL S+E EERGELERI+ADLEEE RNLQ EY++LK+QH  +GL P+ 
Sbjct  9712   GESPVSQPQSPAQILKSVEREERGELERIIADLEEEQRNLQVEYEQLKEQHLRRGL-PVG  9888

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPP+ + +   +  D+ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP
Sbjct  9889   SPPDSVVSPHHTSEDSELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  10068

Query  1128   QAEAKVNGTTVSSPSTSLQRSDSS-------QPMLLRVVGSQTSDSMGEEDLLSPPQDTS  1180
              ++++++NG    SP  S Q+S  S        P   + V          EDLL+PP DTS
Sbjct  10069  ESDSRINGV---SPWASPQQSALSYSLDPDPDPQFHQAVA---------EDLLAPPHDTS  10212

Query  1181   TGLEEVMEQLNNSFPS  1196
              T L E MEQ+N++FPS
Sbjct  10213  TDLTEFMEQINSTFPS  10260


 Score = 46.2 bits (108),  Expect = 0.10, Method: Compositional matrix adjust.
 Identities = 102/479 (21%), Positives = 207/479 (43%), Gaps = 67/479 (13%)
 Frame = +1

Query  7     LEVPALADFNRAWTELTDWLSLLDQVIKSQRVM-VGDLEDINEMIIKQKATMQDLEQRRP  65
             +++ A   F+ A  EL + +      I++  +     +++ +EM  K K   ++  +R P
Sbjct  2050  VDIEAKKKFDAASAELLNCILKSKTAIQAAEIKGYKKMQETSEMKKKLKGLQKEQTERSP  2229

Query  66    QLEELITAAQNLKNKTSNQEARTI-ITDRIERIQNQWDEVQEHLQN--RRQQLNEMLKDS  122
             +L+EL    Q L  +   +   T  I + +E++ ++W ++ +HL++  R+ QL E   D 
Sbjct  2230  RLDELNQTGQVLLEQMGKEGIPTEEIKNVLEKVFSEWKDISQHLEDLARKIQLQE---DI  2400

Query  123   TQWLEAKEEAEQVLGQARAKLESWKEGPYT----------VDAIQKKITETKQLAKDLRQ  172
               + +  ++ E+++   + K E  K  P+            D+ Q+++T       DL  
Sbjct  2401  NAYFKQLDDLEKIV---KTKEEWVKHTPFLEAPQRPSPSLKDSCQRELT-------DLLG  2550

Query  173   WQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALE-------  225
                 +++A    L L     A D   V    E++   ++++ + +  R+  LE       
Sbjct  2551  LHPKIEMARAYCLALKSRPLAPDF--VQQGFESLLGRYQAVRQELEHRQQQLENELKSQP  2724

Query  226   -----ETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD  280
                  ET + L+    D E      ++A+T+ NVL D T+ E+ L++ K + E++     
Sbjct  2725  GRAYLETLKTLKNTLNDSE------SKAQTSLNVLNDLTKLEKALQEKKALDEIL-----  2871

Query  281   LQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHL  340
                  E      + L E ++ + +++   D   + ++  D++  KW++L+ K       L
Sbjct  2872  -----ENQRPTLYTLAEETKALEKTV-SPDVEKMYKQEFDDVQGKWNKLKVKVSKDLHLL  3033

Query  341   EASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEP  400
             E  + + +      + +  W+    D +  QA +  D   +Q Q D    F  E++T E 
Sbjct  3034  EEITSKLRAFEADSKVIEKWMDGVKDFMKEQA-VQRDAEGLQSQLDQCCGFVNEIETVES  3210

Query  401   VIMSTLETVRIFLTEQPLEGLE-----KL--YQEPRELPPEERAQNVTRLLRKQAEEVN  452
               +  ++ +   L   P+ G++     KL  YQ   E   +E A    RL   Q + VN
Sbjct  3211  S-LKDMKEIETNLRSYPVAGIKTWMQTKLVDYQTQLEKFSKEIAIQKNRLSESQEKAVN  3384


 Score = 40.8 bits (94),  Expect = 4.3, Method: Compositional matrix adjust.
 Identities = 55/273 (20%), Positives = 117/273 (42%), Gaps = 21/273 (7%)
 Frame = +1

Query  2     PSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLE  61
             PS++      L  +  A  E+  WL   +   + Q  +  D+E++ E     +A M +L 
Sbjct  901   PSTVTEVDTDLDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEEVKEQFTTHEAFMMELT  1080

Query  62    QRRPQLEELITAAQNLKNK-TSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEML-  119
               +  +  ++ A   L  + T + E    I +++  +  +W+ ++    NR+ +L+++L 
Sbjct  1081  AHQSSVGSVLQAGNQLITQGTLSDEEEFEIQEQMTLLNARWEALRVDSMNRQSRLHDVLM  1260

Query  120   -------KDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVD--AIQKKITETKQLAKDL  170
                    +  + WL   EE          +++  +  P   D  ++QK + + K+L  DL
Sbjct  1261  ELQKKQLQQLSAWLTLTEE----------RIQKMETCPLDDDLKSLQKLLEDHKRLQNDL  1410

Query  171   RQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRL  230
                Q  V+    + + +  +     T  +    + +   W ++ +   ER + L+E + L
Sbjct  1411  EAEQVKVNSLTHMVVIVDENSGESATAVLEDQLQKLGERWTAVCRWTEERWSRLQEINIL  1590

Query  231   LQQFPLDLEKFLAWLTEAETTANVLQDATRKER  263
              Q+   +     AWLTE E   N +Q +  K++
Sbjct  1591  WQELLEEQCLLKAWLTEKEEALNKVQTSNFKDQ  1689


>ref|XM_001915985.1| PREDICTED: Equus caballus similar to utrophin (LOC100066683), 
mRNA
Length=10494

 Score = 1451 bits (3755),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 720/1211 (59%), Positives = 915/1211 (75%), Gaps = 36/1211 (2%)
 Frame = +1

Query  8      EVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQL  67
              E+   AD ++  TEL DWL L+DQ++KS  V VGD+E+IN+ + + K T  DLEQR PQL
Sbjct  6673   EISIPADLDKTITELADWLVLIDQMLKSNIVTVGDVEEINKTVSRMKITRADLEQRHPQL  6852

Query  68     EELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLE  127
              + + T AQNLKNK S+ + RT IT+++ER++NQWD  Q  ++ R+QQL +M+ DS QW +
Sbjct  6853   DYVFTLAQNLKNKASSSDVRTAITEKLERVKNQWDGTQHGVELRQQQLEDMIVDSRQWDD  7032

Query  128    AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
               +EE E+++ +  A+L   ++     D + K+I++ + L ++L      V   +++  KL
Sbjct  7033   HREETEELMRKYEARLYMLQQA--RKDPLVKQISDNQILLQELGPGDGIVMAFDNVLQKL  7206

Query  188    LRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTE  247
              L +Y +DDTR V   TE +  SW ++ + +++R++ALE   R +Q    DLE FL WL E
Sbjct  7207   LEEYGSDDTRNVKETTEYLKTSWINLKQSITDRQSALEAELRTVQASRKDLENFLKWLQE  7386

Query  248    AETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLE  307
              AETT NVL DA+ +E  L+D+   +EL +Q QD+Q EI+AH D++ ++D N QK++++L 
Sbjct  7387   AETTVNVLADASEREDALQDTVLARELTQQMQDIQAEIDAHNDIFKSIDGNRQKMVKALG  7566

Query  308    GSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDE  367
               S++A +LQ RLD+MN +W++L+ KS +IR+HLEAS+++W RL  SL+EL+ WL +KD+E
Sbjct  7567   NSEEATMLQHRLDDMNQRWNDLKAKSASIRAHLEASAEKWNRLLTSLEELIKWLNMKDEE  7746

Query  368    LSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQE  427
              L +Q PIGGD PA+Q Q D  +A +RELK KE  +++ ++  R+FL +QP+E  E    E
Sbjct  7747   LKKQMPIGGDVPALQLQYDHCKALRRELKEKEYSVLNAIDQARVFLADQPIEAPE----E  7914

Query  428    PR-------ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
              PR       EL PEERAQ + + +RKQ+ EV  +WE LN  + +WQ+++D+ LE+L++LQ
Sbjct  7915   PRRNLQSKTELTPEERAQKIAKAMRKQSSEVKEKWESLNAVTNNWQKQVDKALEKLRDLQ  8094

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
               A D+LD  L++AE ++  W+PVGDLLIDSLQDH+EK  A R EIAP+   V  VNDL+ 
Sbjct  8095   GAMDDLDADLKEAEAVRNGWKPVGDLLIDSLQDHIEKTMAFREEIAPINLKVKTVNDLSS  8274

Query  541    QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGP  600
              QL+ L +  S      L+DLN RWKLLQV+V DR++QL EAHRDFGP SQHFLS SVQ P
Sbjct  8275   QLSPLDLHPSLKMSRQLDDLNMRWKLLQVSVGDRLKQLQEAHRDFGPPSQHFLSASVQLP  8454

Query  601    WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
              W+R+IS NKVPYYINH+TQTTCWDHPKMTEL+QSLADLNNVRFSAYRTA+K+RRLQKALC
Sbjct  8455   WQRSISHNKVPYYINHQTQTTCWDHPKMTELFQSLADLNNVRFSAYRTAIKIRRLQKALC  8634

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              LDLL L+   +   QH L QNDQ + +  +INCLTT YD LEQ H  LVNVPLCVDMCLN
Sbjct  8635   LDLLELNTTNEVFKQHKLNQNDQLLSVPDVINCLTTTYDGLEQMHKELVNVPLCVDMCLN  8814

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD  780
              WLLNVYDTGRTG+IRV S K G++SL K  LE+KYRYLFK+VA  T  CDQR+LGLLLHD
Sbjct  8815   WLLNVYDTGRTGKIRVQSLKIGLMSLSKGLLEEKYRYLFKEVAGPTEMCDQRQLGLLLHD  8994

Query  781    SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHR  840
              +IQIPRQLGEVA+FGGSNIEPSVRSCFQ  NNKPEI    F+DWMRLEPQSMVWLPVLHR
Sbjct  8995   AIQIPRQLGEVAAFGGSNIEPSVRSCFQQNNNKPEISVKEFIDWMRLEPQSMVWLPVLHR  9174

Query  841    VAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC  900
              VAAAETAKHQAKCNICKECPI+GFRYRSLKHFNYD+CQSCFFSGR AKGHK+HYPMVEYC
Sbjct  9175   VAAAETAKHQAKCNICKECPIVGFRYRSLKHFNYDVCQSCFFSGRTAKGHKLHYPMVEYC  9354

Query  901    TPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET------------  948
               PTTSGEDVRDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDN+E             
Sbjct  9355   IPTTSGEDVRDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNLEAPITLISMWPEHY  9534

Query  949    -PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN  1007
               P+  PQL HDDTHSRIE YA+RLA+ME +NGS+L DS S   S++DEH LIQ YCQ+L 
Sbjct  9535   DPSQFPQLFHDDTHSRIEQYATRLAQMERTNGSFLTDSSSTTGSVEDEHALIQQYCQTLG  9714

Query  1008   QDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
               +SP+SQP+SPAQIL S+E EERGELERI+ADLEEE RNLQ EY++LK+QH  +GL P+ 
Sbjct  9715   GESPVSQPQSPAQILKSVEREERGELERIIADLEEEQRNLQVEYEQLKEQHLRRGL-PVG  9891

Query  1068   SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              SPP+ + +   +  D+ELIAEAKLLRQHKGRLEARMQILE+HNKQLESQLHRLRQLLEQP
Sbjct  9892   SPPDSVASPHHTAEDSELIAEAKLLRQHKGRLEARMQILEEHNKQLESQLHRLRQLLEQP  10071

Query  1128   QAEAKVNGTT--VSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEE  1185
              ++++++NG +   S   ++L  S    P      G Q   +   EDLL+PP DTST L E
Sbjct  10072  ESDSRINGVSPWASPQQSALSYSLDPDP------GPQFHQAAA-EDLLAPPHDTSTDLTE  10230

Query  1186   VMEQLNNSFPS  1196
              VMEQ+N++FPS
Sbjct  10231  VMEQINSTFPS  10263


>ref|NM_011682.4| Mus musculus utrophin (Utrn), mRNA
Length=12382

 Score = 1438 bits (3723),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 708/1208 (58%), Positives = 918/1208 (75%), Gaps = 28/1208 (2%)
 Frame = +3

Query  7      LEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQ  66
              LE+   AD ++  TEL DWL L+DQ++KS  V VGD+++IN+ + + K T  DLEQR PQ
Sbjct  6750   LEISVPADLDKTITELADWLVLIDQMLKSNIVTVGDVKEINKTVSRMKITKADLEQRHPQ  6929

Query  67     LEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWL  126
              L+ + T AQNLKNK S+ + RT IT+++E+++ QW+  Q  ++ RRQQL +M+ DS QW 
Sbjct  6930   LDCVFTLAQNLKNKASSSDVRTAITEKLEKLKTQWESTQHGVELRRQQLEDMVVDSLQWD  7109

Query  127    EAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALK  186
              + +EE E+++ +  A+    ++     D + K++++ + L ++L      +   +++  K
Sbjct  7110   DHREETEELMRKYEARFYMLQQARR--DPLSKQVSDNQLLLQELGSGDGVIMAFDNVLQK  7283

Query  187    LLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
              LL +YS DDTR V   TE +  SW ++ + +++R++ALE   + +Q    DLE F+ WL 
Sbjct  7284   LLEEYSGDDTRNVEETTEYLKTSWVNLKQSIADRQSALEAELQTVQTSRRDLENFVKWLQ  7463

Query  247    EAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSL  306
              EAETTANVL DA+++E  L+DS   ++L +Q  D+Q EI+AH D++ ++D N QK++++L
Sbjct  7464   EAETTANVLADASQRENALQDSVLARQLRQQMLDIQAEIDAHNDIFKSIDGNRQKMVKAL  7643

Query  307    EGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDD  366
                S++A +LQ RLD+MN +W++L+ KS +IR+HLEAS+++W RL  SL+EL+ WL +KD+
Sbjct  7644   GNSEEATMLQHRLDDMNQRWNDLKAKSASIRAHLEASAEKWNRLLASLEELIKWLNMKDE  7823

Query  367    ELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQ  426
              EL +Q PIGGD PA+Q Q D  +  +RELK KE  +++ ++  R+FL +QP+E  E+  +
Sbjct  7824   ELKKQMPIGGDVPALQLQYDHCKVLRRELKEKEYSVLNAVDQARVFLADQPIEAPEEPRR  8003

Query  427    EPR---ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEAT  483
               P+   EL PEERAQ + + +RKQ+ EV  +WE LN  +++WQ+++ + LE+L++LQ A 
Sbjct  8004   NPQSKTELTPEERAQKIAKAMRKQSSEVREKWENLNAVTSNWQKQVGKALEKLRDLQGAM  8183

Query  484    DELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLT  543
              D+LD  +++ E ++  W+PVGDLLIDSLQDH+EK  A R EIAP+   V  +NDL+ QL+
Sbjct  8184   DDLDADMKEVEAVRNGWKPVGDLLIDSLQDHIEKTLAFREEIAPINLKVKTMNDLSSQLS  8363

Query  544    TLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWER  603
               L +  S      L+DLN RWKLLQV+V+DR++QL EAHRDFGP+SQHFLSTSVQ PW+R
Sbjct  8364   PLDLHPSLKMSRQLDDLNMRWKLLQVSVDDRLKQLQEAHRDFGPSSQHFLSTSVQLPWQR  8543

Query  604    AISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDL  663
              +IS NKVPYYINH+TQTTCWDHPKMTEL+QSLADLNNVRFSAYRTA+K+RRLQKALCLDL
Sbjct  8544   SISHNKVPYYINHQTQTTCWDHPKMTELFQSLADLNNVRFSAYRTAIKIRRLQKALCLDL  8723

Query  664    LSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLL  723
              L L+   +   QH L QNDQ + +  +INCLTT YD LEQ H +LVNVPLCVDMCLNWLL
Sbjct  8724   LELNTTNEVFKQHKLNQNDQLLSVPDVINCLTTTYDGLEQLHKDLVNVPLCVDMCLNWLL  8903

Query  724    NVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQ  783
              NVYDTGRTG+IRV S K G++SL K  LE+KYR LFK+VA  T  CDQR+LGLLLHD+IQ
Sbjct  8904   NVYDTGRTGKIRVQSLKIGLMSLSKGLLEEKYRCLFKEVAGPTEMCDQRQLGLLLHDAIQ  9083

Query  784    IPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAA  843
              IPRQLGEVA+FGGSNIEPSVRSCFQ  NNKPEI    F+DWM LEPQSMVWLPVLHRVAA
Sbjct  9084   IPRQLGEVAAFGGSNIEPSVRSCFQQNNNKPEISVKEFIDWMHLEPQSMVWLPVLHRVAA  9263

Query  844    AETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPT  903
              AETAKHQAKCNICKECPI+GFRYRSLKHFNYD+CQSCFFSGR AKGHK+HYPMVEYC PT
Sbjct  9264   AETAKHQAKCNICKECPIVGFRYRSLKHFNYDVCQSCFFSGRTAKGHKLHYPMVEYCIPT  9443

Query  904    TSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPAS------------  951
              TSGEDVRDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDN+ETP +            
Sbjct  9444   TSGEDVRDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNLETPITLISMWPEHYDPS  9623

Query  952    -SPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDS  1010
               SPQL HDDTHSRIE YA+RLA+ME +NGS+L DS S   S++DEH LIQ YCQ+L  +S
Sbjct  9624   QSPQLFHDDTHSRIEQYATRLAQMERTNGSFLTDSSSTTGSVEDEHALIQQYCQTLGGES  9803

Query  1011   PLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPP  1070
              P+SQP+SPAQIL S+E EERGELERI+ADLEEE RNLQ EY++LK+QH  +GL P+ SPP
Sbjct  9804   PVSQPQSPAQILKSVEREERGELERIIADLEEEQRNLQVEYEQLKEQHLRRGL-PVGSPP  9980

Query  1071   EMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAE  1130
              + + +   +  D+ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP ++
Sbjct  9981   DSIVSPHHTSEDSELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPDSD  10160

Query  1131   AKVNGTT--VSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVME  1188
              +++NG +   S   ++L  S  + P      G Q   +   EDLL+PP DTST L +VME
Sbjct  10161  SRINGVSPWASPQHSALSYSLDTDP------GPQFHQA-ASEDLLAPPHDTSTDLTDVME  10319

Query  1189   QLNNSFPS  1196
              Q+N++FPS
Sbjct  10320  QINSTFPS  10343


 Score = 42.7 bits (99),  Expect = 1.2, Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 11/198 (5%)
 Frame = +3

Query  218   SEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQ  277
             +E  + + E    L  + + LE+ L WL  AE T     D +      +D + VKE    
Sbjct  981   AETPSTVTEVDMDLDSYQIALEEVLTWLLSAEDTFQEQDDIS------DDVEEVKEQFAT  1142

Query  278   WQDLQGEIEAH-TDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNI  336
              +    E+ AH + V   L   +Q + +     ++   +Q ++  +N +W  LR +S+  
Sbjct  1143  HETFMMELTAHQSSVGSVLQAGNQLMTQGTLSEEEEFEIQEQMTLLNARWEALRVESMER  1322

Query  337   RSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQA--PIGGDFPAVQKQNDVHRAFKRE  394
             +S L  +  + ++  L  Q+L  WL L ++ + +    P+G D P++QK    H++ + +
Sbjct  1323  QSRLHDALMELQKKQL--QQLSSWLALTEERIQKMESLPLGDDLPSLQKLLQEHKSLQND  1496

Query  395   LKTKEPVIMSTLETVRIF  412
             L+ ++  + S    V I 
Sbjct  1497  LEAEQVKVNSLTHMVVIV  1550


>emb|Y12229.1| M.musculus mRNA for utrophin
Length=11096

 Score = 1438 bits (3723),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 708/1208 (58%), Positives = 918/1208 (75%), Gaps = 28/1208 (2%)
 Frame = +1

Query  7      LEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQ  66
              LE+   AD ++  TEL DWL L+DQ++KS  V VGD+++IN+ + + K T  DLEQR PQ
Sbjct  6658   LEISVPADLDKTITELADWLVLIDQMLKSNIVTVGDVKEINKTVSRMKITKADLEQRHPQ  6837

Query  67     LEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWL  126
              L+ + T AQNLKNK S+ + RT IT+++E+++ QW+  Q  ++ RRQQL +M+ DS QW 
Sbjct  6838   LDCVFTLAQNLKNKASSSDVRTAITEKLEKLKTQWESTQHGVELRRQQLEDMVVDSLQWD  7017

Query  127    EAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALK  186
              + +EE E+++ +  A+    ++     D + K++++ + L ++L      +   +++  K
Sbjct  7018   DHREETEELMRKYEARFYMLQQARR--DPLSKQVSDNQLLLQELGSGDGVIMAFDNVLQK  7191

Query  187    LLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
              LL +YS DDTR V   TE +  SW ++ + +++R++ALE   + +Q    DLE F+ WL 
Sbjct  7192   LLEEYSGDDTRNVEETTEYLKTSWVNLKQSIADRQSALEAELQTVQTSRRDLENFVKWLQ  7371

Query  247    EAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSL  306
              EAETTANVL DA+++E  L+DS   ++L +Q  D+Q EI+AH D++ ++D N QK++++L
Sbjct  7372   EAETTANVLADASQRENALQDSVLARQLRQQMLDIQAEIDAHNDIFKSIDGNRQKMVKAL  7551

Query  307    EGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDD  366
                S++A +LQ RLD+MN +W++L+ KS +IR+HLEAS+++W RL  SL+EL+ WL +KD+
Sbjct  7552   GNSEEATMLQHRLDDMNQRWNDLKAKSASIRAHLEASAEKWNRLLASLEELIKWLNMKDE  7731

Query  367    ELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQ  426
              EL +Q PIGGD PA+Q Q D  +  +RELK KE  +++ ++  R+FL +QP+E  E+  +
Sbjct  7732   ELKKQMPIGGDVPALQLQYDHCKVLRRELKEKEYSVLNAVDQARVFLADQPIEAPEEPRR  7911

Query  427    EPR---ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEAT  483
               P+   EL PEERAQ + + +RKQ+ EV  +WE LN  +++WQ+++ + LE+L++LQ A 
Sbjct  7912   NPQSKTELTPEERAQKIAKAMRKQSSEVREKWENLNAVTSNWQKQVGKALEKLRDLQGAM  8091

Query  484    DELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLT  543
              D+LD  +++ E ++  W+PVGDLLIDSLQDH+EK  A R EIAP+   V  +NDL+ QL+
Sbjct  8092   DDLDADMKEVEAVRNGWKPVGDLLIDSLQDHIEKTLAFREEIAPINLKVKTMNDLSSQLS  8271

Query  544    TLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWER  603
               L +  S      L+DLN RWKLLQV+V+DR++QL EAHRDFGP+SQHFLSTSVQ PW+R
Sbjct  8272   PLDLHPSLKMSRQLDDLNMRWKLLQVSVDDRLKQLQEAHRDFGPSSQHFLSTSVQLPWQR  8451

Query  604    AISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDL  663
              +IS NKVPYYINH+TQTTCWDHPKMTEL+QSLADLNNVRFSAYRTA+K+RRLQKALCLDL
Sbjct  8452   SISHNKVPYYINHQTQTTCWDHPKMTELFQSLADLNNVRFSAYRTAIKIRRLQKALCLDL  8631

Query  664    LSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLL  723
              L L+   +   QH L QNDQ + +  +INCLTT YD LEQ H +LVNVPLCVDMCLNWLL
Sbjct  8632   LELNTTNEVFKQHKLNQNDQLLSVPDVINCLTTTYDGLEQLHKDLVNVPLCVDMCLNWLL  8811

Query  724    NVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQ  783
              NVYDTGRTG+IRV S K G++SL K  LE+KYR LFK+VA  T  CDQR+LGLLLHD+IQ
Sbjct  8812   NVYDTGRTGKIRVQSLKIGLMSLSKGLLEEKYRCLFKEVAGPTEMCDQRQLGLLLHDAIQ  8991

Query  784    IPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAA  843
              IPRQLGEVA+FGGSNIEPSVRSCFQ  NNKPEI    F+DWM LEPQSMVWLPVLHRVAA
Sbjct  8992   IPRQLGEVAAFGGSNIEPSVRSCFQQNNNKPEISVKEFIDWMHLEPQSMVWLPVLHRVAA  9171

Query  844    AETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPT  903
              AETAKHQAKCNICKECPI+GFRYRSLKHFNYD+CQSCFFSGR AKGHK+HYPMVEYC PT
Sbjct  9172   AETAKHQAKCNICKECPIVGFRYRSLKHFNYDVCQSCFFSGRTAKGHKLHYPMVEYCIPT  9351

Query  904    TSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPAS------------  951
              TSGEDVRDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDN+ETP +            
Sbjct  9352   TSGEDVRDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNLETPITLISMWPEHYDPS  9531

Query  952    -SPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDS  1010
               SPQL HDDTHSRIE YA+RLA+ME +NGS+L DS S   S++DEH LIQ YCQ+L  +S
Sbjct  9532   QSPQLFHDDTHSRIEQYATRLAQMERTNGSFLTDSSSTTGSVEDEHALIQQYCQTLGGES  9711

Query  1011   PLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPP  1070
              P+SQP+SPAQIL S+E EERGELERI+ADLEEE RNLQ EY++LK+QH  +GL P+ SPP
Sbjct  9712   PVSQPQSPAQILKSVEREERGELERIIADLEEEQRNLQVEYEQLKEQHLRRGL-PVGSPP  9888

Query  1071   EMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAE  1130
              + + +   +  D+ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP ++
Sbjct  9889   DSIVSPHHTSEDSELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPDSD  10068

Query  1131   AKVNGTT--VSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVME  1188
              +++NG +   S   ++L  S  + P      G Q   +   EDLL+PP DTST L +VME
Sbjct  10069  SRINGVSPWASPQHSALSYSLDTDP------GPQFHQA-ASEDLLAPPHDTSTDLTDVME  10227

Query  1189   QLNNSFPS  1196
              Q+N++FPS
Sbjct  10228  QINSTFPS  10251


 Score = 47.8 bits (112),  Expect = 0.036, Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 11/185 (5%)
 Frame = +1

Query  231   LQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAH-T  289
             L  + + LE+ L WL  AE T     D +      +D + VKE     +    E+ AH +
Sbjct  931   LDSYQIALEEVLTWLLSAEDTFQEQHDIS------DDVEEVKEQFATHETFMMELTAHQS  1092

Query  290   DVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKR  349
              V   L   +Q + +     ++   +Q ++  +N +W  LR +S+  +S L  +  + ++
Sbjct  1093  SVGSVLQAGNQLMTQGTLSREEEFEIQEQMTLLNARWEALRVESMERQSRLHDALMELQK  1272

Query  350   LHLSLQELLVWLQLKDDELSRQA--PIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLE  407
               L  Q+L  WL L ++ + +    P+G D P++QK    H++ + +L+ ++  + S   
Sbjct  1273  KQL--QQLSSWLALTEERIQKMESLPLGDDLPSLQKLLQEHKSLQNDLEAEQVKVNSLTH  1446

Query  408   TVRIF  412
              V I 
Sbjct  1447  MVVIV  1461


>gb|M92650.1|HUMDMDXX Human Duchenne muscular dystrophy (DMD) mRNA, complete cds
Length=2110

 Score = 1299 bits (3361),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 615/616 (99%), Positives = 615/616 (99%), Gaps = 0/616 (0%)
 Frame = +2

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
              HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  71    GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  250

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI
Sbjct  251   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  430

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  431   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  610

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  611   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  790

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK
Sbjct  791   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  970

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  974
             VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM
Sbjct  971   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  1150

Query  975   ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE  1034
             ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE
Sbjct  1151  ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE  1330

Query  1035  RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ  1094
             RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ
Sbjct  1331  RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ  1510

Query  1095  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM  1154
             HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM
Sbjct  1511  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM  1690

Query  1155  LLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGR  1214
             LLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGR
Sbjct  1691  LLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGR  1870

Query  1215  AMESLVSVMTDEEGAE  1230
             AMESLVSVMTDEEGAE
Sbjct  1871  AMESLVSVMTDEEGAE  1918


>ref|NM_004018.2| Homo sapiens dystrophin (DMD), transcript variant Dp71ab, mRNA
Length=4552

 Score = 1298 bits (3359),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 615/616 (99%), Positives = 615/616 (99%), Gaps = 0/616 (0%)
 Frame = +1

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
              HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  97    GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  276

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI
Sbjct  277   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  456

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  457   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  636

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  637   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  816

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK
Sbjct  817   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  996

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  974
             VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM
Sbjct  997   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  1176

Query  975   ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE  1034
             ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE
Sbjct  1177  ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE  1356

Query  1035  RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ  1094
             RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ
Sbjct  1357  RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ  1536

Query  1095  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM  1154
             HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM
Sbjct  1537  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM  1716

Query  1155  LLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGR  1214
             LLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGR
Sbjct  1717  LLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGR  1896

Query  1215  AMESLVSVMTDEEGAE  1230
             AMESLVSVMTDEEGAE
Sbjct  1897  AMESLVSVMTDEEGAE  1944


>emb|CR859102.1| Pongo abelii mRNA; cDNA DKFZp459C1629 (from clone DKFZp459C1629)
Length=4563

 Score = 1295 bits (3351),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 613/616 (99%), Positives = 614/616 (99%), Gaps = 0/616 (0%)
 Frame = +1

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
              HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  118   GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  297

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI
Sbjct  298   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  477

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  478   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  657

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  658   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  837

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK
Sbjct  838   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  1017

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  974
             VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM
Sbjct  1018  VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  1197

Query  975   ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE  1034
             ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE
Sbjct  1198  ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE  1377

Query  1035  RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ  1094
             RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ
Sbjct  1378  RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ  1557

Query  1095  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM  1154
             HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPS SLQRSDSSQPM
Sbjct  1558  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSASLQRSDSSQPM  1737

Query  1155  LLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGR  1214
             LLRVVGSQTSDSMGE+DLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGR
Sbjct  1738  LLRVVGSQTSDSMGEDDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGR  1917

Query  1215  AMESLVSVMTDEEGAE  1230
             AMESLVSVMTDEEGAE
Sbjct  1918  AMESLVSVMTDEEGAE  1965


>ref|NM_001005244.1| Rattus norvegicus dystrophin, muscular dystrophy (Dmd), transcript 
variant Dp71ab, mRNA
Length=2297

 Score = 1294 bits (3348),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 613/616 (99%), Positives = 614/616 (99%), Gaps = 0/616 (0%)
 Frame = +1

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
              HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  109   GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  288

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI
Sbjct  289   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  468

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  469   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  648

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  649   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  828

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK
Sbjct  829   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  1008

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  974
             VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM
Sbjct  1009  VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  1188

Query  975   ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE  1034
             ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE
Sbjct  1189  ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE  1368

Query  1035  RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ  1094
             RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ
Sbjct  1369  RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ  1548

Query  1095  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM  1154
             HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM
Sbjct  1549  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM  1728

Query  1155  LLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGR  1214
             LLRVVGSQTS+SMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGR
Sbjct  1729  LLRVVGSQTSESMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGR  1908

Query  1215  AMESLVSVMTDEEGAE  1230
             AMESLVSVM DEEGAE
Sbjct  1909  AMESLVSVMIDEEGAE  1956


>gb|AY326948.1| Rattus norvegicus dystrophin Dp71ab (Dmd) mRNA, complete cds; 
alternatively spliced
Length=1914

 Score = 1290 bits (3339),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 611/616 (99%), Positives = 613/616 (99%), Gaps = 0/616 (0%)
 Frame = +1

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
              HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  46    GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  225

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI
Sbjct  226   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  405

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  406   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  585

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANN PEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  586   GGSNIEPSVRSCFQFANNNPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  765

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK
Sbjct  766   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  945

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  974
             VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM
Sbjct  946   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  1125

Query  975   ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE  1034
             ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE
Sbjct  1126  ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE  1305

Query  1035  RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ  1094
             RILADLEEEN+NLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ
Sbjct  1306  RILADLEEENQNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ  1485

Query  1095  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM  1154
             HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM
Sbjct  1486  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM  1665

Query  1155  LLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGR  1214
             LLRVVGSQTS+SMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGR
Sbjct  1666  LLRVVGSQTSESMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGR  1845

Query  1215  AMESLVSVMTDEEGAE  1230
             AMESLVSVM DEEGAE
Sbjct  1846  AMESLVSVMIDEEGAE  1893


>gb|BC094758.1| Homo sapiens dystrophin, mRNA (cDNA clone IMAGE:30336570), complete 
cds
Length=4621

 Score = 1287 bits (3331),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 615/629 (97%), Positives = 615/629 (97%), Gaps = 13/629 (2%)
 Frame = +3

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
              HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  111   GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  290

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI
Sbjct  291   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  470

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  471   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  650

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  651   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  830

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK
Sbjct  831   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  1010

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET-------------PASSPQLSHDDTH  961
             VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET             PASSPQLSHDDTH
Sbjct  1011  VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDSAPASSPQLSHDDTH  1190

Query  962   SRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQI  1021
             SRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQI
Sbjct  1191  SRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQI  1370

Query  1022  LISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPR  1081
             LISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPR
Sbjct  1371  LISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPR  1550

Query  1082  DAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSP  1141
             DAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSP
Sbjct  1551  DAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSP  1730

Query  1142  STSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHN  1201
             STSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHN
Sbjct  1731  STSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHN  1910

Query  1202  VGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             VGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  1911  VGSLFHMADDLGRAMESLVSVMTDEEGAE  1997


>gb|BC028720.1| Homo sapiens dystrophin, mRNA (cDNA clone IMAGE:4822807), complete 
cds
Length=4658

 Score = 1287 bits (3330),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 615/629 (97%), Positives = 615/629 (97%), Gaps = 13/629 (2%)
 Frame = +1

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
              HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  148   GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  327

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI
Sbjct  328   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  507

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  508   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  687

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  688   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  867

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK
Sbjct  868   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  1047

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET-------------PASSPQLSHDDTH  961
             VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET             PASSPQLSHDDTH
Sbjct  1048  VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDSAPASSPQLSHDDTH  1227

Query  962   SRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQI  1021
             SRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQI
Sbjct  1228  SRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQI  1407

Query  1022  LISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPR  1081
             LISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPR
Sbjct  1408  LISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPR  1587

Query  1082  DAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSP  1141
             DAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSP
Sbjct  1588  DAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSP  1767

Query  1142  STSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHN  1201
             STSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHN
Sbjct  1768  STSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHN  1947

Query  1202  VGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             VGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  1948  VGSLFHMADDLGRAMESLVSVMTDEEGAE  2034


>ref|NM_004016.2| Homo sapiens dystrophin (DMD), transcript variant Dp71b, mRNA
Length=4591

 Score = 1286 bits (3328),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 615/629 (97%), Positives = 615/629 (97%), Gaps = 13/629 (2%)
 Frame = +1

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
              HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  97    GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  276

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI
Sbjct  277   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  456

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  457   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  636

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  637   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  816

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK
Sbjct  817   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  996

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET-------------PASSPQLSHDDTH  961
             VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET             PASSPQLSHDDTH
Sbjct  997   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDSAPASSPQLSHDDTH  1176

Query  962   SRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQI  1021
             SRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQI
Sbjct  1177  SRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQI  1356

Query  1022  LISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPR  1081
             LISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPR
Sbjct  1357  LISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPR  1536

Query  1082  DAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSP  1141
             DAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSP
Sbjct  1537  DAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSP  1716

Query  1142  STSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHN  1201
             STSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHN
Sbjct  1717  STSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHN  1896

Query  1202  VGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             VGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  1897  VGSLFHMADDLGRAMESLVSVMTDEEGAE  1983


>emb|CR858847.1| Pongo abelii mRNA; cDNA DKFZp469A0710 (from clone DKFZp469A0710)
Length=5043

 Score = 1266 bits (3276),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 614/934 (65%), Positives = 755/934 (80%), Gaps = 17/934 (1%)
 Frame = +3

Query  271   VKELMKQWQ-DLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSEL  329
             ++EL+ +++ D+Q EI+AH D++ ++D N QK++++L  S++A +LQ RLD+MN +W++L
Sbjct  174   LRELLTKFEKDIQAEIDAHNDIFKSIDGNRQKMVKALGNSEEATMLQHRLDDMNQRWNDL  353

Query  330   RKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHR  389
             + KS +IR+HLEAS+++W RL +SL+EL+ WL +KD+EL +Q PIGGD PA+Q Q D  +
Sbjct  354   KAKSASIRAHLEASAEKWNRLLMSLEELIKWLNMKDEELKKQMPIGGDIPALQLQYDHCK  533

Query  390   AFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPR-------ELPPEERAQNVTR  442
             A +RELK KE  I++ ++  R+FL +QP+E  E    EPR       EL PEERAQ + +
Sbjct  534   ALRRELKEKEYSILNAVDQARVFLADQPIEAPE----EPRRNLQSKTELTPEERAQKIAK  701

Query  443   LLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQP  502
              +RKQ+ E+  +WE LN  +++WQ+++D+ LE+L++LQ A D+LD  +++AE ++  W+P
Sbjct  702   AMRKQSSELKEKWESLNAVTSNWQKQVDKALEKLRDLQGAMDDLDADMKEAESVRNGWKP  881

Query  503   VGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNT  562
             VGDLLIDSLQDH+EK+ A R EIAP+   V  VNDL+ QL+ L +  S      L+DLN 
Sbjct  882   VGDLLIDSLQDHIEKIMAFREEIAPINFKVKTVNDLSSQLSPLDLHPSLKMSRQLDDLNM  1061

Query  563   RWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTC  622
             RWKLLQV+V+DR++QL EAHRDFGP+SQHFLSTSVQ PW+R+IS NKVPYYINH+TQTTC
Sbjct  1062  RWKLLQVSVDDRLKQLQEAHRDFGPSSQHFLSTSVQLPWQRSISHNKVPYYINHQTQTTC  1241

Query  623   WDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQND  682
             WDHPKMTEL+QSLADLNNVRFSAYRTA+K+RRLQKALCLDLL LS   +   QH L QND
Sbjct  1242  WDHPKMTELFQSLADLNNVRFSAYRTAIKIRRLQKALCLDLLELSTTIEIFKQHKLNQND  1421

Query  683   QPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTG  742
             Q + +  +INCLTT YD LEQ H +LVNVPLCVDMCLNWLLNVYDTGRTG+IRV S K G
Sbjct  1422  QLLSVPDVINCLTTTYDGLEQMHKDLVNVPLCVDMCLNWLLNVYDTGRTGKIRVQSLKIG  1601

Query  743   IISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPS  802
             ++SL K  LE+KYRYLFK+VA  T  CDQR+LGLLLHD+IQIPRQLGEVA+FGGSNIEPS
Sbjct  1602  LMSLSKGLLEEKYRYLFKEVAGPTEMCDQRQLGLLLHDAIQIPRQLGEVAAFGGSNIEPS  1781

Query  803   VRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPII  862
             VRSCFQ  NNKPEI    F+DWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI+
Sbjct  1782  VRSCFQQNNNKPEISVKEFIDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIV  1961

Query  863   GFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRT  922
             GFRYRSLKHFNYD+CQSCFFSGR AKGHK+HYPMVEYC PTTSGEDVRDF KVLKNKFR+
Sbjct  1962  GFRYRSLKHFNYDVCQSCFFSGRTAKGHKLHYPMVEYCIPTTSGEDVRDFTKVLKNKFRS  2141

Query  923   KRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYL  982
             K+YFAKHPR+GYLPVQTVLEGDN+ETP+ SPQL HDDTHSRIE YA+RLA+ME +NGS+L
Sbjct  2142  KKYFAKHPRLGYLPVQTVLEGDNLETPSQSPQLLHDDTHSRIEQYATRLAQMERTNGSFL  2321

Query  983   NDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEE  1042
              DS S   S++DEH LIQ YCQ+L  +SP+SQP+SPAQIL S+E EERGELERI+ADLEE
Sbjct  2322  TDSSSTTGSVEDEHALIQQYCQTLGGESPVSQPQSPAQILKSVEREERGELERIIADLEE  2501

Query  1043  ENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEAR  1102
             E  NLQ EY++LK QH  +GL P+ SPPE + +   +  D+ELIAEAKLLRQHKGRLEAR
Sbjct  2502  EQGNLQVEYEQLKDQHLRRGL-PVGSPPESIVSPHHTSEDSELIAEAKLLRQHKGRLEAR  2678

Query  1103  MQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQ  1162
             MQILEDHNKQLESQLHRLRQLLEQP++++++NG    SP  S Q S  S  +     G Q
Sbjct  2679  MQILEDHNKQLESQLHRLRQLLEQPESDSRINGV---SPWASPQHSARSYSLDPDASGPQ  2849

Query  1163  TSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPS  1196
                + G EDLL+PP DTST L EVMEQ++++FPS
Sbjct  2850  FHQAAG-EDLLAPPHDTSTDLTEVMEQIHSTFPS  2948


>emb|X83506.1| M.musculus mRNA for G-utrophin
Length=3161

 Score = 1237 bits (3200),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 605/955 (63%), Positives = 751/955 (78%), Gaps = 29/955 (3%)
 Frame = +3

Query  260   RKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRL  319
             R +R+   S   ++L K   D+Q EI+AH D++ ++D N QK++++L  S++A +LQ RL
Sbjct  291   RLQRMAVSSPRYQKLCK---DIQAEIDAHNDIFKSIDGNRQKMVKALGNSEEATMLQHRL  461

Query  320   DNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFP  379
             D+MN +W++L+ KS +IR+HLEAS+++W RL  SL+EL+ WL +KD+EL +Q PIGGD P
Sbjct  462   DDMNQRWNDLKAKSASIRAHLEASAEKWNRLLASLEELIKWLNMKDEELKKQMPIGGDVP  641

Query  380   AVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPR---ELPPEER  436
             A+Q Q D  +  +RELK KE  +++ ++  R+FL +QP+E  E+  + P+   EL PEER
Sbjct  642   ALQLQYDHCKVLRRELKEKEYSVLNAVDQARVFLADQPIEAPEEPRRNPQSKTELTPEER  821

Query  437   AQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVI  496
             AQ + + +RKQ+ EV  +WE LN  +++WQ+++ + LE+L++LQ A D+LD  +++ E +
Sbjct  822   AQKIAKAMRKQSSEVREKWENLNAVTSNWQKQVGKALEKLRDLQGAMDDLDADMKEVEAV  1001

Query  497   KGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLST  556
             +  W+PVGDLLIDSLQDH+EK  A R EIAP+   V  +NDL+ QL+ L +  S      
Sbjct  1002  RNGWKPVGDLLIDSLQDHIEKTLAFREEIAPINLKVKTMNDLSSQLSPLDLHPSLKMSRQ  1181

Query  557   LEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINH  616
             L+DLN RWKLLQV+V+DR++QL EAHRDFGP+SQHFLSTSVQ PW+R+IS NKVPYYINH
Sbjct  1182  LDDLNMRWKLLQVSVDDRLKQLQEAHRDFGPSSQHFLSTSVQLPWQRSISHNKVPYYINH  1361

Query  617   ETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQH  676
             +TQTTCWDHPKMTEL+QSLADLNNVRFSAYRTA+K+RRLQKALCLDLL L+   +   QH
Sbjct  1362  QTQTTCWDHPKMTELFQSLADLNNVRFSAYRTAIKIRRLQKALCLDLLELNTTNEVFKQH  1541

Query  677   NLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRV  736
              L QNDQ + +  +INCLTT YD LEQ H +LVNVPLCVDMCLNWLLNVYDTGRTG+IRV
Sbjct  1542  KLNQNDQLLSVPDVINCLTTTYDGLEQLHKDLVNVPLCVDMCLNWLLNVYDTGRTGKIRV  1721

Query  737   LSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGG  796
              S K G++SL K  LE+KYR LFK+VA  T  CDQR+LGLLLHD+IQIPRQLGEVA+FGG
Sbjct  1722  QSLKIGLMSLSKGLLEEKYRCLFKEVAGPTEMCDQRQLGLLLHDAIQIPRQLGEVAAFGG  1901

Query  797   SNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNIC  856
             SNIEPSVRSCFQ  NNKPEI    F+DWM LEPQSMVWLPVLHRVAAAETAKHQAKCNIC
Sbjct  1902  SNIEPSVRSCFQQNNNKPEISVKEFIDWMHLEPQSMVWLPVLHRVAAAETAKHQAKCNIC  2081

Query  857   KECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVL  916
             KECPI+GFRYRSLKHFNYD+CQSCFFSGR AKGHK+HYPMVEYC PTTSGEDVRDF KVL
Sbjct  2082  KECPIVGFRYRSLKHFNYDVCQSCFFSGRTAKGHKLHYPMVEYCIPTTSGEDVRDFTKVL  2261

Query  917   KNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPAS-------------SPQLSHDDTHSR  963
             KNKFR+K+YFAKHPR+GYLPVQTVLEGDN+ETP +             SPQL HDDTHSR
Sbjct  2262  KNKFRSKKYFAKHPRLGYLPVQTVLEGDNLETPITLISMWPEHYDPSQSPQLFHDDTHSR  2441

Query  964   IEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILI  1023
             IE YA+RLA+ME +NGS+L DS S   S++DEH LIQ YCQ+L  +SP+SQP+SPAQIL 
Sbjct  2442  IEQYATRLAQMERTNGSFLTDSSSTTGSVEDEHALIQQYCQTLGGESPVSQPQSPAQILK  2621

Query  1024  SLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDA  1083
             S+E EERGELERI+ADLEEE RNLQ EY++LK+QH  +GL P+ SPP+ + +   +  D+
Sbjct  2622  SVEREERGELERIIADLEEEQRNLQVEYEQLKEQHLRRGL-PVGSPPDSIVSPHHTSEDS  2798

Query  1084  ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTT--VSSP  1141
             ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP +++++NG +   S  
Sbjct  2799  ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPDSDSRINGVSPWASPQ  2978

Query  1142  STSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPS  1196
              ++L  S  + P      G Q   +   EDLL+PP DTST L +VMEQ+N++FPS
Sbjct  2979  HSALSYSLDTDP------GPQFHQA-ASEDLLAPPHDTSTDLTDVMEQINSTFPS  3122


>emb|CR848277.2| Xenopus tropicalis finished cDNA, clone TNeu143c03
Length=2368

 Score = 1236 bits (3198),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 586/640 (91%), Positives = 611/640 (95%), Gaps = 13/640 (2%)
 Frame = +1

Query  604   AISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDL  663
             ++SP        HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDL
Sbjct  67    SLSPAMRELLKGHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDL  246

Query  664   LSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLL  723
             L LSAAC+ALDQHNLKQNDQ MDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLL
Sbjct  247   LGLSAACEALDQHNLKQNDQLMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLL  426

Query  724   NVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQ  783
             NVYDTGRTGRIRVLSFKTG+ISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD+IQ
Sbjct  427   NVYDTGRTGRIRVLSFKTGVISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDAIQ  606

Query  784   IPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAA  843
             IPRQLGEVASFGGSNIEPSVRSCFQ+ANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAA
Sbjct  607   IPRQLGEVASFGGSNIEPSVRSCFQYANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAA  786

Query  844   AETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPT  903
             AETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPT
Sbjct  787   AETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPT  966

Query  904   TSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET-------------PA  950
             TSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET             PA
Sbjct  967   TSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDSAPA  1146

Query  951   SSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDS  1010
             SSPQLSHDDTHSRIEHYASRLAEMEN+NGSYLNDSISPNESIDDEHLLIQHYCQSLNQ+S
Sbjct  1147  SSPQLSHDDTHSRIEHYASRLAEMENTNGSYLNDSISPNESIDDEHLLIQHYCQSLNQES  1326

Query  1011  PLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPP  1070
             PLSQPRSPAQILISLESEERGELERILADLEEEN+NLQ+EYDRLK+QH+HKGLSPLPSPP
Sbjct  1327  PLSQPRSPAQILISLESEERGELERILADLEEENKNLQSEYDRLKEQHDHKGLSPLPSPP  1506

Query  1071  EMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAE  1130
             EMMP+SPQS RDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAE
Sbjct  1507  EMMPSSPQSQRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAE  1686

Query  1131  AKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQL  1190
             AKVNGTT SSP++SLQRS+SSQPMLLRVVGSQTS+SMGE+DLLSPP D+STGLE+VMEQL
Sbjct  1687  AKVNGTTYSSPTSSLQRSESSQPMLLRVVGSQTSESMGEDDLLSPPHDSSTGLEDVMEQL  1866

Query  1191  NNSFPSSRGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             NNSFP++RG NVGSLFHMADDLGRAME+LV+VMTD+E  E
Sbjct  1867  NNSFPTARGTNVGSLFHMADDLGRAMETLVTVMTDDEVLE  1986


>gb|BC080941.1| Xenopus tropicalis dystrophin, mRNA (cDNA clone MGC:79631 IMAGE:6979993), 
complete cds
Length=2367

 Score = 1236 bits (3198),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 586/640 (91%), Positives = 611/640 (95%), Gaps = 13/640 (2%)
 Frame = +3

Query  604   AISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDL  663
             ++SP        HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDL
Sbjct  153   SLSPAMRELLKGHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDL  332

Query  664   LSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLL  723
             L LSAAC+ALDQHNLKQNDQ MDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLL
Sbjct  333   LGLSAACEALDQHNLKQNDQLMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLL  512

Query  724   NVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQ  783
             NVYDTGRTGRIRVLSFKTG+ISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD+IQ
Sbjct  513   NVYDTGRTGRIRVLSFKTGVISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDAIQ  692

Query  784   IPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAA  843
             IPRQLGEVASFGGSNIEPSVRSCFQ+ANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAA
Sbjct  693   IPRQLGEVASFGGSNIEPSVRSCFQYANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAA  872

Query  844   AETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPT  903
             AETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPT
Sbjct  873   AETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPT  1052

Query  904   TSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET-------------PA  950
             TSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET             PA
Sbjct  1053  TSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDSAPA  1232

Query  951   SSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDS  1010
             SSPQLSHDDTHSRIEHYASRLAEMEN+NGSYLNDSISPNESIDDEHLLIQHYCQSLNQ+S
Sbjct  1233  SSPQLSHDDTHSRIEHYASRLAEMENTNGSYLNDSISPNESIDDEHLLIQHYCQSLNQES  1412

Query  1011  PLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPP  1070
             PLSQPRSPAQILISLESEERGELERILADLEEEN+NLQ+EYDRLK+QH+HKGLSPLPSPP
Sbjct  1413  PLSQPRSPAQILISLESEERGELERILADLEEENKNLQSEYDRLKEQHDHKGLSPLPSPP  1592

Query  1071  EMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAE  1130
             EMMP+SPQS RDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAE
Sbjct  1593  EMMPSSPQSQRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAE  1772

Query  1131  AKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQL  1190
             AKVNGTT SSP++SLQRS+SSQPMLLRVVGSQTS+SMGE+DLLSPP D+STGLE+VMEQL
Sbjct  1773  AKVNGTTYSSPTSSLQRSESSQPMLLRVVGSQTSESMGEDDLLSPPHDSSTGLEDVMEQL  1952

Query  1191  NNSFPSSRGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             NNSFP++RG NVGSLFHMADDLGRAME+LV+VMTD+E  E
Sbjct  1953  NNSFPTARGTNVGSLFHMADDLGRAMETLVTVMTDDEVLE  2072


>ref|NM_004017.2| Homo sapiens dystrophin (DMD), transcript variant Dp71a, mRNA
Length=4584

 Score = 1235 bits (3195),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 585/588 (99%), Positives = 585/588 (99%), Gaps = 0/588 (0%)
 Frame = +1

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
              HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  97    GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  276

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI
Sbjct  277   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  456

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  457   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  636

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  637   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  816

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK
Sbjct  817   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  996

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  974
             VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM
Sbjct  997   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  1176

Query  975   ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE  1034
             ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE
Sbjct  1177  ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE  1356

Query  1035  RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ  1094
             RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ
Sbjct  1357  RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ  1536

Query  1095  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM  1154
             HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM
Sbjct  1537  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM  1716

Query  1155  LLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
             LLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG N 
Sbjct  1717  LLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGRNT  1860


 Score = 71.6 bits (174),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/33 (100%), Positives = 33/33 (100%), Gaps = 0/33 (0%)
 Frame = +3

Query  1198  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  1878  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1976


>ref|NM_012698.2| Rattus norvegicus dystrophin, muscular dystrophy (Dmd), transcript 
variant Dp71a, mRNA
Length=2329

 Score = 1234 bits (3194),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 584/588 (99%), Positives = 585/588 (99%), Gaps = 0/588 (0%)
 Frame = +1

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
              HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  109   GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  288

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI
Sbjct  289   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  468

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  469   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  648

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  649   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  828

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK
Sbjct  829   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  1008

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  974
             VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM
Sbjct  1009  VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  1188

Query  975   ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE  1034
             ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE
Sbjct  1189  ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE  1368

Query  1035  RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ  1094
             RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ
Sbjct  1369  RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ  1548

Query  1095  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM  1154
             HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM
Sbjct  1549  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM  1728

Query  1155  LLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
             LLRVVGSQTS+SMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG N 
Sbjct  1729  LLRVVGSQTSESMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGRNA  1872


 Score = 67.8 bits (164),  Expect = 3e-08, Method: Composition-based stats.
 Identities = 32/35 (91%), Positives = 33/35 (94%), Gaps = 0/35 (0%)
 Frame = +3

Query  1196  SSRGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             + RGHNVGSLFHMADDLGRAMESLVSVM DEEGAE
Sbjct  1884  NERGHNVGSLFHMADDLGRAMESLVSVMIDEEGAE  1988


>gb|BC149235.1| Bos taurus dystrophin, mRNA (cDNA clone MGC:155049 IMAGE:8466545), 
complete cds
Length=2333

 Score = 1230 bits (3182),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 581/588 (98%), Positives = 585/588 (99%), Gaps = 0/588 (0%)
 Frame = +1

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
              HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  106   GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  285

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI
Sbjct  286   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  465

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  466   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  645

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  646   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  825

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK
Sbjct  826   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  1005

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  974
             VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM
Sbjct  1006  VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  1185

Query  975   ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE  1034
             ENS+GSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE
Sbjct  1186  ENSSGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE  1365

Query  1035  RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ  1094
             RILADLEEENRNLQAEYDRLK+QHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ
Sbjct  1366  RILADLEEENRNLQAEYDRLKEQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ  1545

Query  1095  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM  1154
             HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM
Sbjct  1546  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM  1725

Query  1155  LLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
             LLRVVGSQTS+SMGEEDLLSPPQD+STGLEEVMEQLNNSFPSSRG N 
Sbjct  1726  LLRVVGSQTSESMGEEDLLSPPQDSSTGLEEVMEQLNNSFPSSRGRNT  1869


 Score = 67.8 bits (164),  Expect = 3e-08, Method: Composition-based stats.
 Identities = 32/35 (91%), Positives = 34/35 (97%), Gaps = 0/35 (0%)
 Frame = +3

Query  1196  SSRGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             + RGHNVGSLFH+ADDLGRAMESLVSVMTDEEGAE
Sbjct  1881  NERGHNVGSLFHLADDLGRAMESLVSVMTDEEGAE  1985


>gb|BC070078.1| Homo sapiens dystrophin, mRNA (cDNA clone IMAGE:5262850), complete 
cds
Length=4598

 Score = 1230 bits (3182),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 583/588 (99%), Positives = 584/588 (99%), Gaps = 0/588 (0%)
 Frame = +2

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
              HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  98    GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  277

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI
Sbjct  278   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  457

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  458   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  637

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  638   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  817

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK
Sbjct  818   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  997

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  974
             VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM
Sbjct  998   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  1177

Query  975   ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE  1034
             ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE
Sbjct  1178  ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE  1357

Query  1035  RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ  1094
             RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPS PEM+PTSPQSPRDAELIAEAKLLRQ
Sbjct  1358  RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSTPEMVPTSPQSPRDAELIAEAKLLRQ  1537

Query  1095  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM  1154
             HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM
Sbjct  1538  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM  1717

Query  1155  LLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
             LLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG N 
Sbjct  1718  LLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGRNT  1861


 Score = 71.6 bits (174),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/33 (100%), Positives = 33/33 (100%), Gaps = 0/33 (0%)
 Frame = +1

Query  1198  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  1879  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1977


>gb|AY326947.1| Rattus norvegicus dystrophin Dp71a (Dmd) mRNA, complete cds; 
alternatively spliced
Length=1858

 Score = 1229 bits (3181),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 582/588 (98%), Positives = 584/588 (99%), Gaps = 0/588 (0%)
 Frame = +1

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
              HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  46    GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  225

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI
Sbjct  226   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  405

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  406   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  585

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANN PEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  586   GGSNIEPSVRSCFQFANNNPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  765

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK
Sbjct  766   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  945

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  974
             VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM
Sbjct  946   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  1125

Query  975   ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE  1034
             ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE
Sbjct  1126  ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE  1305

Query  1035  RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ  1094
             RILADLEEEN+NLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ
Sbjct  1306  RILADLEEENQNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ  1485

Query  1095  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM  1154
             HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM
Sbjct  1486  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM  1665

Query  1155  LLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
             LLRVVGSQTS+SMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG N 
Sbjct  1666  LLRVVGSQTSESMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGRNA  1809


>ref|NM_004015.2| Homo sapiens dystrophin (DMD), transcript variant Dp71, mRNA
Length=4623

 Score = 1224 bits (3166),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 585/601 (97%), Positives = 585/601 (97%), Gaps = 13/601 (2%)
 Frame = +1

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
              HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  97    GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  276

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI
Sbjct  277   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  456

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  457   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  636

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  637   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  816

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK
Sbjct  817   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  996

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET-------------PASSPQLSHDDTH  961
             VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET             PASSPQLSHDDTH
Sbjct  997   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDSAPASSPQLSHDDTH  1176

Query  962   SRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQI  1021
             SRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQI
Sbjct  1177  SRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQI  1356

Query  1022  LISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPR  1081
             LISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPR
Sbjct  1357  LISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPR  1536

Query  1082  DAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSP  1141
             DAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSP
Sbjct  1537  DAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSP  1716

Query  1142  STSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHN  1201
             STSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG N
Sbjct  1717  STSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGRN  1896

Query  1202  V  1202
              
Sbjct  1897  T  1899


 Score = 71.6 bits (174),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/33 (100%), Positives = 33/33 (100%), Gaps = 0/33 (0%)
 Frame = +3

Query  1198  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  1917  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  2015


>dbj|AK036936.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched 
library, clone:9930028B14 product:dystrophin, muscular 
dystrophy, full insert sequence
Length=4437

 Score = 1223 bits (3164),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 584/601 (97%), Positives = 585/601 (97%), Gaps = 13/601 (2%)
 Frame = +2

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
              HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  47    GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  226

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI
Sbjct  227   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  406

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  407   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  586

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  587   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  766

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK
Sbjct  767   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  946

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET-------------PASSPQLSHDDTH  961
             VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET             PASSPQLSHDDTH
Sbjct  947   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDSAPASSPQLSHDDTH  1126

Query  962   SRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQI  1021
             SRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQI
Sbjct  1127  SRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQI  1306

Query  1022  LISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPR  1081
             LISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPR
Sbjct  1307  LISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPR  1486

Query  1082  DAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSP  1141
             DAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSP
Sbjct  1487  DAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSP  1666

Query  1142  STSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHN  1201
             STSLQRSDSSQPMLLRVVGSQTS+SMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG N
Sbjct  1667  STSLQRSDSSQPMLLRVVGSQTSESMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGRN  1846

Query  1202  V  1202
              
Sbjct  1847  A  1849


 Score = 71.6 bits (174),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/33 (100%), Positives = 33/33 (100%), Gaps = 0/33 (0%)
 Frame = +1

Query  1198  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  1867  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1965


>gb|BC082429.1| Xenopus laevis dystrophin, mRNA (cDNA clone MGC:83347 IMAGE:6865319), 
complete cds
Length=2263

 Score = 1220 bits (3156),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 582/640 (90%), Positives = 606/640 (94%), Gaps = 14/640 (2%)
 Frame = +3

Query  604   AISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDL  663
             ++SP        HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDL
Sbjct  66    SLSPAMRELLKGHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDL  245

Query  664   LSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLL  723
             L LSAAC+ALDQHNLKQNDQ MDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLL
Sbjct  246   LGLSAACEALDQHNLKQNDQLMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLL  425

Query  724   NVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQ  783
             NVYDTGRTGRIRVLSFKTG+ISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD+IQ
Sbjct  426   NVYDTGRTGRIRVLSFKTGVISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDAIQ  605

Query  784   IPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAA  843
             IPRQLGEVASFGGSNIEPSVRSCFQ+ANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAA
Sbjct  606   IPRQLGEVASFGGSNIEPSVRSCFQYANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAA  785

Query  844   AETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPT  903
             AETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPT
Sbjct  786   AETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPT  965

Query  904   TSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET-------------PA  950
             TSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET             PA
Sbjct  966   TSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDSAPA  1145

Query  951   SSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDS  1010
             SSPQLSHDDTH RIEHYASRLAEMEN+NGSYLNDSISPNESIDDEHLLIQHYCQSLNQ+S
Sbjct  1146  SSPQLSHDDTHLRIEHYASRLAEMENTNGSYLNDSISPNESIDDEHLLIQHYCQSLNQES  1325

Query  1011  PLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPP  1070
             PLSQPRSPAQILISLESEERGELERILADLEEEN+NLQ EYDRLK+QH+HKGLSPLPSPP
Sbjct  1326  PLSQPRSPAQILISLESEERGELERILADLEEENKNLQTEYDRLKEQHDHKGLSPLPSPP  1505

Query  1071  EMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAE  1130
             EMMP+SPQS RDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAE
Sbjct  1506  EMMPSSPQSQRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAE  1685

Query  1131  AKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQL  1190
             +KVNGTT SSP+ SLQRS+S+QPMLLRVVGSQTS+SMGE+DLLS P D+STGLEEVMEQL
Sbjct  1686  SKVNGTTYSSPTPSLQRSESNQPMLLRVVGSQTSESMGEDDLLS-PHDSSTGLEEVMEQL  1862

Query  1191  NNSFPSSRGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             NNSFP++RG NVGSLFHM DDLGRAME+LV+VMTD+E  E
Sbjct  1863  NNSFPTARGTNVGSLFHMVDDLGRAMETLVTVMTDDEVLE  1982


>gb|BC136240.1| Xenopus tropicalis cDNA clone IMAGE:7661888, containing frame-shift 
errors
Length=2437

 Score = 1142 bits (2953),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 543/599 (90%), Positives = 567/599 (94%), Gaps = 9/599 (1%)
 Frame = +3

Query  604   AISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDL  663
             ++SP        HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDL
Sbjct  141   SLSPAMRELLKGHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDL  320

Query  664   LSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLL  723
             L LSAAC+ALDQHNLKQNDQ MDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLL
Sbjct  321   LGLSAACEALDQHNLKQNDQLMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLL  500

Query  724   NVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQ  783
             NVYDTGRTGRIRVLSFKTG+ISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHD+IQ
Sbjct  501   NVYDTGRTGRIRVLSFKTGVISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDAIQ  680

Query  784   IPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAA  843
             IPRQLGEVASFGGSNIEPSVRSCFQ+ANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAA
Sbjct  681   IPRQLGEVASFGGSNIEPSVRSCFQYANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAA  860

Query  844   AETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPT  903
             AETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPT
Sbjct  861   AETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPT  1040

Query  904   TSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSR  963
             TSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETP +       D    
Sbjct  1041  TSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVD----  1208

Query  964   IEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILI  1023
                  S LAEMEN+NGSYLNDSISPNESIDDEHLLIQHYCQSLNQ+SPLSQPRSPAQILI
Sbjct  1209  -----SALAEMENTNGSYLNDSISPNESIDDEHLLIQHYCQSLNQESPLSQPRSPAQILI  1373

Query  1024  SLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDA  1083
             SLESEERGELERILADLEEEN+NLQ+EYDRLK+QH+HKGLSPLPSPPEMMP+SPQS RDA
Sbjct  1374  SLESEERGELERILADLEEENKNLQSEYDRLKEQHDHKGLSPLPSPPEMMPSSPQSQRDA  1553

Query  1084  ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPST  1143
             ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTT SSP++
Sbjct  1554  ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTYSSPTS  1733

Query  1144  SLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
             SLQRS+SSQPMLLRVVGSQTS+SMGE+DLLSPP D+STGLE+VMEQLNNSFP++RG +V
Sbjct  1734  SLQRSESSQPMLLRVVGSQTSESMGEDDLLSPPHDSSTGLEDVMEQLNNSFPTARGRSV  1910


 Score = 57.4 bits (137),  Expect = 5e-05, Method: Composition-based stats.
 Identities = 27/35 (77%), Positives = 31/35 (88%), Gaps = 0/35 (0%)
 Frame = +2

Query  1196  SSRGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             + RG NVGSLFHMADDLGRAME+LV+VMTD+E  E
Sbjct  1922  NERGTNVGSLFHMADDLGRAMETLVTVMTDDEVLE  2026


>dbj|AK159639.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched 
library, clone:I420026N21 product:dystrophin, muscular 
dystrophy, full insert sequence
Length=2839

 Score = 1104 bits (2855),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 528/545 (96%), Positives = 529/545 (97%), Gaps = 13/545 (2%)
 Frame = +3

Query  671   DALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGR  730
             DALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGR
Sbjct  3     DALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGR  182

Query  731   TGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGE  790
             TGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGE
Sbjct  183   TGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGE  362

Query  791   VASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQ  850
             VASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQ
Sbjct  363   VASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQ  542

Query  851   AKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVR  910
             AKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVR
Sbjct  543   AKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVR  722

Query  911   DFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET-------------PASSPQLSH  957
             DFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET             PASSPQLSH
Sbjct  723   DFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDSAPASSPQLSH  902

Query  958   DDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRS  1017
             DDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRS
Sbjct  903   DDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRS  1082

Query  1018  PAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSP  1077
             PAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSP
Sbjct  1083  PAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSP  1262

Query  1078  QSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTT  1137
             QSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTT
Sbjct  1263  QSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTT  1442

Query  1138  VSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSS  1197
             VSSPSTSLQRSDSSQPMLLRVVGSQTS+SMGEEDLLSPPQDTSTGLEEVMEQLN SFPSS
Sbjct  1443  VSSPSTSLQRSDSSQPMLLRVVGSQTSESMGEEDLLSPPQDTSTGLEEVMEQLNKSFPSS  1622

Query  1198  RGHNV  1202
             RG N 
Sbjct  1623  RGRNA  1637


 Score = 71.6 bits (174),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/33 (100%), Positives = 33/33 (100%), Gaps = 0/33 (0%)
 Frame = +2

Query  1198  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  1655  RGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1753


>emb|X99702.1| S.caniculua mRNA for dystrophin
Length=1993

 Score = 1100 bits (2846),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 536/587 (91%), Positives = 560/587 (95%), Gaps = 13/587 (2%)
 Frame = +1

Query  625   HPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQP  684
             HPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSL +AC+A DQHNLKQNDQ 
Sbjct  1     HPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLPSACEAFDQHNLKQNDQL  180

Query  685   MDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGII  744
             MDIL+IINCLT+IYDRLEQEH+NLVNVPLCVDMCLNWLLNVYDTGRTG+IRVLSFK+GI+
Sbjct  181   MDILEIINCLTSIYDRLEQEHSNLVNVPLCVDMCLNWLLNVYDTGRTGKIRVLSFKSGIM  360

Query  745   SLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVR  804
             SLCKAHLEDKYRYLFKQVAS TGFCDQRRLGLLLHD+IQIPRQLGEVASFGGSNIEPSVR
Sbjct  361   SLCKAHLEDKYRYLFKQVASPTGFCDQRRLGLLLHDAIQIPRQLGEVASFGGSNIEPSVR  540

Query  805   SCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGF  864
             SCFQFANNKPE+EAALFLDWMRLEPQSMVW+PVLHRVAAAETAKHQAKCNICKECPIIGF
Sbjct  541   SCFQFANNKPEVEAALFLDWMRLEPQSMVWMPVLHRVAAAETAKHQAKCNICKECPIIGF  720

Query  865   RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKR  924
             RYRSLKHFNYD+CQSCFFSGR AKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKR
Sbjct  721   RYRSLKHFNYDVCQSCFFSGRTAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKR  900

Query  925   YFAKHPRMGYLPVQTVLEGDNMET-------------PASSPQLSHDDTHSRIEHYASRL  971
             YFAKHPRMGYLPVQTVLEGDN+ET             PASSPQLSHDDTHSRIEHYASRL
Sbjct  901   YFAKHPRMGYLPVQTVLEGDNLETPVTLINFWPVDYEPASSPQLSHDDTHSRIEHYASRL  1080

Query  972   AEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERG  1031
             AEMEN NGSYLNDSISPNESIDDEHLLIQHYCQSLNQ+SPLSQPRSPAQILISLESEERG
Sbjct  1081  AEMENRNGSYLNDSISPNESIDDEHLLIQHYCQSLNQESPLSQPRSPAQILISLESEERG  1260

Query  1032  ELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKL  1091
             ELERILADLE+ENRNLQ+EY+RLKQQH+HKGLSPLPSPPEMMP SPQSPRDAELIAEAKL
Sbjct  1261  ELERILADLEDENRNLQSEYERLKQQHDHKGLSPLPSPPEMMPISPQSPRDAELIAEAKL  1440

Query  1092  LRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSS  1151
             LRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQ E +VNGTTVSSPSTS QRSDSS
Sbjct  1441  LRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQTEVRVNGTTVSSPSTSSQRSDSS  1620

Query  1152  QPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSR  1198
             QP+LL  VGSQTS +MGE++LLSPPQ T+TGLEEVMEQLNNSFPSSR
Sbjct  1621  QPVLLHGVGSQTSGTMGEDELLSPPQGTTTGLEEVMEQLNNSFPSSR  1761


 Score = 60.1 bits (144),  Expect = 8e-06, Method: Composition-based stats.
 Identities = 27/35 (77%), Positives = 32/35 (91%), Gaps = 0/35 (0%)
 Frame = +3

Query  1196  SSRGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             S RG+NVGSLFHM DDLGRAME+LV++MTD+E AE
Sbjct  1785  SERGNNVGSLFHMVDDLGRAMETLVTIMTDDETAE  1889


>emb|X99700.1| X.laevis mRNA for dystrophin
Length=1961

 Score = 1100 bits (2845),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 525/577 (90%), Positives = 547/577 (94%), Gaps = 9/577 (1%)
 Frame = +1

Query  626   PKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPM  685
             PKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLL LSAAC+ALDQ+NLKQNDQ M
Sbjct  1     PKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLGLSAACEALDQYNLKQNDQLM  180

Query  686   DILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIIS  745
             DILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTG+IS
Sbjct  181   DILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGVIS  360

Query  746   LCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRS  805
             LCKAHLEDKYRYLFKQVASSTG+CDQRRLGLLLHD+IQIPRQLGEVASFGGSNIEPSVRS
Sbjct  361   LCKAHLEDKYRYLFKQVASSTGYCDQRRLGLLLHDAIQIPRQLGEVASFGGSNIEPSVRS  540

Query  806   CFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFR  865
             CFQ+ANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFR
Sbjct  541   CFQYANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFR  720

Query  866   YRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRY  925
             YRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRY
Sbjct  721   YRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRY  900

Query  926   FAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDS  985
             FAKHPRMGYLPVQTVLEGDNMETP +       D         S LAEMEN+NGSYLNDS
Sbjct  901   FAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVD---------SALAEMENTNGSYLNDS  1053

Query  986   ISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  1045
             ISPNESIDDEHLLIQHYCQSLNQ+SPLSQPRSPAQILISLESEERGELERILADLEEEN+
Sbjct  1054  ISPNESIDDEHLLIQHYCQSLNQESPLSQPRSPAQILISLESEERGELERILADLEEENK  1233

Query  1046  NLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQI  1105
             NLQAEYDRLK+QH+HKGLSPLP+PPEMMP SPQS RDAELIAEAKLLRQHKGRLEARMQI
Sbjct  1234  NLQAEYDRLKEQHDHKGLSPLPTPPEMMPPSPQSQRDAELIAEAKLLRQHKGRLEARMQI  1413

Query  1106  LEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSD  1165
             LEDHNKQLESQLHRLRQLLEQPQAE+KVNGTT SSP+ SLQRS+S+QPMLLRVVGSQTS+
Sbjct  1414  LEDHNKQLESQLHRLRQLLEQPQAESKVNGTTYSSPTPSLQRSESNQPMLLRVVGSQTSE  1593

Query  1166  SMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
             SMGE+D L  P D+STGLEEVMEQLNNSFP++RG  V
Sbjct  1594  SMGEDDRLLSPHDSSTGLEEVMEQLNNSFPTARGRIV  1704


 Score = 55.8 bits (133),  Expect = 1e-04, Method: Composition-based stats.
 Identities = 26/35 (74%), Positives = 30/35 (85%), Gaps = 0/35 (0%)
 Frame = +3

Query  1196  SSRGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             + RG NVGSLFHM DDLGRAME+LV+VMTD+E  E
Sbjct  1716  NERGTNVGSLFHMVDDLGRAMETLVTVMTDDEVLE  1820


>ref|XM_002227549.1| Branchiostoma floridae hypothetical protein (BRAFLDRAFT_125744) 
mRNA, complete cds
Length=6396

 Score = 1096 bits (2834),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 576/1057 (54%), Positives = 738/1057 (69%), Gaps = 104/1057 (9%)
 Frame = +1

Query  264   LLEDSKGVKE-LMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNM  322
             ++E +  VK+ L+K  QDLQ EI+AH DV+ +L++  + IL+S+E  +DA +LQRRL+NM
Sbjct  2332  MIELTFSVKDMLLKFEQDLQAEIDAHQDVWSSLNDTGRHILQSIEHCEDAQMLQRRLENM  2511

Query  323   NFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQ  382
             N +W+ LR KSL+IR  LEA+ +QW +L ++LQ+L+ W  +K+DEL+R  P+GGD   VQ
Sbjct  2512  NDRWTALRSKSLDIRQRLEANIEQWNQLLITLQDLIEWCGIKEDELTRMQPVGGDLNTVQ  2691

Query  383   KQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLY-----------------  425
             +Q   H+ F++ ++ K P+I ++LET + +L EQ  +    L                  
Sbjct  2692  QQQADHKLFRQSVEDKRPLIETSLETGKEYLVEQGEDSRSTLNTSGDSQISATSLSDELS  2871

Query  426   --QEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEAT  483
               ++   L PEE+A+ + R L++Q + +  +W +L   S  WQ++ID+   +L++L +A 
Sbjct  2872  TEEDKVGLTPEEQAKEIARNLKRQVKTLTDKWAQLQGRSDIWQKRIDDVQNKLRQLHDAM  3051

Query  484   DELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLT  543
             ++L  KL + E +K SW PVGDL+ID+LQD ++ VKA + +IAP++ NV + N+LA    
Sbjct  3052  NDLSGKLHEGETLKASWLPVGDLIIDNLQDQIDDVKAFQAQIAPIQSNVDYTNNLANSFP  3231

Query  544   TLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWER  603
              + +QLS  NL+ LEDLNTRW+LLQV+ +DR++QL EA RDFGP SQHFLSTSV+G WER
Sbjct  3232  PMDVQLSSSNLNRLEDLNTRWRLLQVSAQDRLKQLEEALRDFGPNSQHFLSTSVEGTWER  3411

Query  604   AISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDL  663
             A++ NKVPYYINH T+TT WDHPKMTEL+QSLADLN+VRFSAYRTAMKLRRLQKALCLDL
Sbjct  3412  AVAANKVPYYINHTTETTSWDHPKMTELFQSLADLNDVRFSAYRTAMKLRRLQKALCLDL  3591

Query  664   LSLSAACDALDQHNLK-QNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWL  722
             LS++ A DA DQH L+ QND+ MD+++IINCLTTIYD LEQ+H NLVNVPLCVDMCLNWL
Sbjct  3592  LSMNNAIDAFDQHGLRGQNDRLMDVIEIINCLTTIYDNLEQDHGNLVNVPLCVDMCLNWL  3771

Query  723   LNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSI  782
             LNVYDTGR+G+IRVLSFK GIISLC+AHLEDKYR+ F+ +A +TGF DQR+LGLLLHD I
Sbjct  3772  LNVYDTGRSGKIRVLSFKVGIISLCRAHLEDKYRFNFRLIAEATGFADQRKLGLLLHDLI  3951

Query  783   QIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVA  842
             Q+PRQLGE+ASFGGSNIEPSVRSCF+ A  KPEIEAA FLDWM+ EPQSMVWLPVLHR+A
Sbjct  3952  QVPRQLGEIASFGGSNIEPSVRSCFERAGGKPEIEAAHFLDWMKQEPQSMVWLPVLHRLA  4131

Query  843   AAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTP  902
             AAETAKHQAKCNICKE PI+GFRYR L+ FN+D+CQSCF SGR AKGHK+ +PM EYCT 
Sbjct  4132  AAETAKHQAKCNICKEYPIVGFRYRCLRCFNFDMCQSCFLSGRKAKGHKLSHPMQEYCTA  4311

Query  903   TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET--------------  948
             TTSGEDVRDFAKV++NKFR+K+   KHPR+GYLPVQTVLEGDN+ET              
Sbjct  4312  TTSGEDVRDFAKVVRNKFRSKKSLKKHPRLGYLPVQTVLEGDNLETPLVLWRYEQVTPDR  4491

Query  949   -------------PASSPQLS-HDDTHSRIEHYASRLAEMENSNGSY-----LNDSISPN  989
                          P+SSPQ +   D HSR+E YASRLAE+E S  S      +  ++S  
Sbjct  4492  EEPPRHLHIEERQPSSSPQQAVSQDMHSRLELYASRLAEVEQSMNSMSSSSDIWTTVSST  4671

Query  990   ESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQA  1049
             +      ++I          S   +P+SPAQI+++++ E+R ELE ++ DLEEENRNLQ 
Sbjct  4672  KIRGSLRVIIAVL-------SGKEKPKSPAQIVVAIDQEQRAELEAMIKDLEEENRNLQM  4830

Query  1050  EYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDH  1109
             EY+RLK Q + +     PS P+  P S +  RD ELIAEAKLLRQHKGRLEARMQILEDH
Sbjct  4831  EYERLKIQKQQQ-----PS-PQAEPRS-EVNRDNELIAEAKLLRQHKGRLEARMQILEDH  4989

Query  1110  NKQLESQLHRLRQLLEQPQAE-----------AKVNGTTVSSPSTSLQRSD--SSQPMLL  1156
             N+QLE+QL RLRQLLEQPQ++              N  T SS   SL  +   S  P   
Sbjct  4990  NRQLEAQLQRLRQLLEQPQSDRSPTSHTSSSSHTPNEVTPSSSQGSLPGNTPPSRAPRFP  5169

Query  1157  RVV-GSQTSDSM--GEEDL------LSPP---------QDTSTGLEEVMEQLNNSFPSSR  1198
                 G    D    G  D+       +PP         Q     LEEVM ++N+SFP   
Sbjct  5170  TTTNGLPNGDGAVNGAADIRVQGATRTPPPLRDGQRRQQTPEEQLEEVMREVNSSFPPDS  5349

Query  1199  GH-----NVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
              H      VGSLF+MA DL +A+  LV+VMT+E+G E
Sbjct  5350  NHTQGKNTVGSLFNMAGDLNKAVGKLVTVMTNEDGTE  5460


 Score =  196 bits (499),  Expect = 5e-47, Method: Compositional matrix adjust.
 Identities = 100/248 (40%), Positives = 156/248 (62%), Gaps = 1/248 (0%)
 Frame = +1

Query  8     EVPAL-ADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQ  66
             ++P++  DF+++  EL DWL LLD ++KSQ V VGD+E+I EMIIKQK  + DL+ ++PQ
Sbjct  808   DMPSMYPDFDKSVAELRDWLMLLDHMLKSQIVTVGDVEEIEEMIIKQKTVLNDLDVKKPQ  987

Query  67    LEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWL  126
             L+ ++ A + L         + ++ ++++RIQ QWDE    +  R+++L+ ML D   W 
Sbjct  988   LDTVVAAGRRLIQTADTDSDKQLLKEKVDRIQEQWDEASTRVGARKRELDNMLTDCHHWD  1167

Query  127   EAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALK  186
             E +E+  + L QA  ++E   E   TVD + K+I + K+   +LRQWQ +++  NDLA K
Sbjct  1168  ELREDVSRWLEQAEQQVEHDSEVGQTVDVLDKQIAQHKEFMDNLRQWQPSIEAVNDLAQK  1347

Query  187   LLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
             L+ DYS DDT K+  + + IN  W+ ++ R  ER+  L+     LQ+F L LE+FLAWL+
Sbjct  1348  LISDYSNDDTSKIKQMIDRINGRWQQLNNRCRERQQNLKNALEKLQKFSLQLEEFLAWLS  1527

Query  247   EAETTANV  254
             EAE    V
Sbjct  1528  EAEAAMEV  1551


>gb|AF304204.1|AF304204 Strongylocentrotus purpuratus dystrophin-like protein mRNA, complete 
cds
Length=12315

 Score = 1093 bits (2827),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 581/1267 (45%), Positives = 826/1267 (65%), Gaps = 63/1267 (4%)
 Frame = +1

Query  14     DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITA  73
              D ++   EL DWL LL+++++ Q V VGDLE+I  MI+KQK+ +QDL+ + PQL+EL+  
Sbjct  8518   DVDKVVAELRDWLMLLERMLRLQVVTVGDLEEIENMIMKQKSHIQDLDMKHPQLKELVER  8697

Query  74     AQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAE  133
              A++++ +T+N+  + ++ +++ R+   W+  ++   +R  QL  M+ DS ++ +  +E  
Sbjct  8698   AKSIQEETANEGDKRLLHEKMARLLELWEGAEKRATHRAGQLETMMTDSQRFHQLTQELL  8877

Query  134    QVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSA  193
                L +    L+ +      +  +Q ++   K   +++ QW+  +D  N+   +L  +Y  
Sbjct  8878   TWLSKMEGTLDRYPPVAQDMLMLQAQLMAQKGFLEEVEQWKPCLDAVNENGDRLGLEYKD  9057

Query  194    DDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTAN  253
              DDT K+  + + +N  W +I  R + R   +EET + +Q     L +F AWL   E   +
Sbjct  9058   DDTSKIKHVLDGVNQRWANICDRSNVRLGKIEETEQSMQDIDSQLSEFTAWLDSVEGPLS  9237

Query  254    VLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAV  313
               L   T  +   ED   V+  ++Q QDLQ EIEAH  +  +L+++  K ++  +  D++ 
Sbjct  9238   SLYSQTEDKADREDRDRVRVWLQQQQDLQAEIEAHHSILSSLNQSGVKAVQDADSPDESH  9417

Query  314    LLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAP  373
               LQ++LD +N +W+ +  +S  IR  LEA++++W  L  + +EL+ W++LK+D+L ++ P
Sbjct  9418   TLQKKLDTVNHRWTNIHDRSAEIRKRLEANAEEWNNLVRATEELVRWIRLKEDDLIKRQP  9597

Query  374    IGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPP  433
              +GGD+ ++Q+Q   H+ ++++L+ K+  +   L+   ++L EQ    L+ L  E     P
Sbjct  9598   VGGDYNSIQQQISDHKVYRQQLEEKQSAVERNLQMGSLYLAEQ--RDLD-LLSEKELTGP  9768

Query  434    EERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQA  493
              E  A N+   L+    ++   W KLN+ S +WQ K+DE   ++  L +A D+L  +L +A
Sbjct  9769   EAEAHNIVHKLKDSVTDLQDSWNKLNIKSENWQHKLDEMSTKMLALHQAMDKLSSRLHEA  9948

Query  494    EVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYN  553
              E  +  W PVGDL+IDSL  HL ++++ +   +P+ +++  V  +A       + LS  N
Sbjct  9949   EATRSRWLPVGDLIIDSLPQHLAELRSFQDYYSPIHDDLEKVTQMAGHFPAQQVSLSTVN  10128

Query  554    LSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYY  613
                 LED+  RWK LQ+A+++R R L+EA RDFGP SQHFL  SVQ PWERA++ NKVPY+
Sbjct  10129  QGRLEDIVRRWKTLQLAIDERARLLNEALRDFGPQSQHFLRASVQHPWERAVAANKVPYF  10308

Query  614    INHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDAL  673
              INH T+TT WDHP+MTEL+ SL DLN V+FSAYRT MKLRRLQK+LCL LL+L++A    
Sbjct  10309  INHGTETTHWDHPRMTELFHSLFDLNAVKFSAYRTGMKLRRLQKSLCLYLLNLASAESIF  10488

Query  674    DQHNL-KQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTG  732
               QH L   ND+ +D+ +II CL T+Y+ L  +H  +VNVP CVDMCLNWLLNVYDT R+G
Sbjct  10489  TQHELVSGNDRTLDVTEIITCLATVYENLAMDHPGMVNVPQCVDMCLNWLLNVYDTVRSG  10668

Query  733    RIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVA  792
              RIRVL+FK GI+ LC AHLEDKYR++ + VA   G  DQR LGLLLHD +QIPRQLGEVA
Sbjct  10669  RIRVLAFKVGIVMLCNAHLEDKYRFICRFVADKNGMIDQRGLGLLLHDCVQIPRQLGEVA  10848

Query  793    SFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAK  852
              SFGGSNIEPSVRSCF    +KP IE A FL WM+LEPQSMVW+PVLHRVAA+ETAKHQAK
Sbjct  10849  SFGGSNIEPSVRSCFNMTGSKPLIEPAQFLAWMKLEPQSMVWMPVLHRVAASETAKHQAK  11028

Query  853    CNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDF  912
              CNICKECPI+G RYR LK FN+D+CQSCFFSGR AK HK+ +PM EYCT TTSGEDVRDF
Sbjct  11029  CNICKECPIVGLRYRCLKCFNFDLCQSCFFSGRKAKTHKLSHPMQEYCTTTTSGEDVRDF  11208

Query  913    AKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQ-LSHDDTHSRIEHYASRL  971
              AKV++NKF++KRY+ KHPR+GYLPVQ+VLEGD++E+P ++PQ +++ DTH+R+E YA+RL
Sbjct  11209  AKVVRNKFKSKRYYRKHPRVGYLPVQSVLEGDDLESPITTPQHMANQDTHTRLELYANRL  11388

Query  972    AEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERG  1031
              AE+E S G+ LN   S    ++DEH LI HYC SL  D   + P SPAQI++S+++E R 
Sbjct  11389  AEVE-SQGT-LN---SVPTDLEDEHQLIAHYCHSLGGDVS-TVPNSPAQIVVSIDAEHRP  11550

Query  1032   ELERILADLEEENRNLQAEYDRLK--QQHEHKGLSPLPSPPEMMPTSPQSP-RDAELIAE  1088
              +LE  + +LE+ENR L +E + LK  +  + K  + L +      TS +SP RDAEL+AE
Sbjct  11551  DLESQINELEDENRTLLSELETLKTLRSEDVKRAAELAASSGDERTSGRSPGRDAELVAE  11730

Query  1089   AKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQ-AEAKVNGTTVSSPSTSLQR  1147
              AKLLRQHKGRLEARMQILEDHN+QLE+QL RLRQLLEQPQ   A    ++ ++P+ S   
Sbjct  11731  AKLLRQHKGRLEARMQILEDHNRQLEAQLQRLRQLLEQPQDKSASQVSSSKTTPAVSPTS  11910

Query  1148   SDSSQPMLLRV-------------VGSQTSDSMGEE-----DLLSPPQDT----------  1179
              S SS     R+                  SD  GEE        +PP             
Sbjct  11911  SISSASKAKRIQHPIAIETRTNGGTSDYDSDMAGEEYNNHPSPHTPPHLKDDHHHHHHLH  12090

Query  1180   -------------STGLEEVMEQLNNSFPSSR-----GHN-VGSLFHMADDLGRAMESLV  1220
                              L++V+++LNN FP        G N VGSL HMAD++G+A+++LV
Sbjct  12091  QGGGAANGVQAKGKVDLDKVIQELNN-FPDGAKNGNVGQNSVGSLLHMADNIGKAVDTLV  12267

Query  1221   SVMTDEE  1227
              +VM+DEE
Sbjct  12268  TVMSDEE  12288


 Score = 58.9 bits (141),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 114/579 (19%), Positives = 239/579 (41%), Gaps = 68/579 (11%)
 Frame = +1

Query  25    WLSLLDQVIKSQRVMVG---DLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
             W    +Q  + +R M G    ++D  E   K KA    +E++R ++++L   AQ L    
Sbjct  6688  WYQFKNQTDQMERRMEGVDEQMKDGMEDEEKMKAIQGQIEEKRQEIQKLNQNAQQLNTDG  6867

Query  82    SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEML---------KDSTQW----LEA  128
             + Q A  ++     R+  QW E+++     R+ + E +         K S ++    +E 
Sbjct  6868  ARQVAEPVML----RMNTQWREIEQRFAQFRKPVREEVFVERTITEVKTSFKFEKTTIEQ  7035

Query  129   KEEAEQ------VLGQARAKLESW--KEGPYTVDAIQKKITET--------KQLAKDLRQ  172
             K  +E       +L +A A  +     +G   V  +     E+        K + + L  
Sbjct  7036  KSGSEPPADFSPLLAEANALCDRVVDTQGILKVPELTGAAFESFSVQEDHLKAIKESLDD  7215

Query  173   WQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQ  232
                +++   +    ++    A   +++  + + +  +W+ +++   ER    +      +
Sbjct  7216  LAPSIESVKEREHVVVSQVGATQRKEIQDVMDRLRENWQRLNREYEERHGQFQRCFDQWR  7395

Query  233   QFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVY  292
             QF  D+    +WL+EAE    ++QD+ R +  L     +++  K    L+  I  H  + 
Sbjct  7396  QFHCDMRDLASWLSEAE---RMIQDSKRADGRLH----IEKACKHQPVLEEGIATHQAMV  7554

Query  293   HNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHL  352
              +L+ N + I+ +   S D  +LQ +L+ +N +W  +  +  + +   E S ++ +    
Sbjct  7555  ASLNSNGEDIV-AQSSSVDGGMLQEKLEGLNARWKSVCAEVASWKDRFEFSPEKVEAFME  7731

Query  353   SLQELLVWLQLKDDELSRQA-PIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
                 L  WL      +  QA P+  D  A ++     +  + +L+ K        E+V+I
Sbjct  7732  ECSHLQQWLSECQALIRPQAQPVPADATAFKELILKIKEREEDLQQKADEKQRIEESVQI  7911

Query  412   FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
              L+   +               +ER  ++    +K+ E +   WEK++     ++ +++E
Sbjct  7912  LLSGGSIS--------------QERGISI----KKETEALFKLWEKVSGTIPKFRAQLEE  8037

Query  472   TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDH-LEKVKALRGEIAPLKE  530
              LE+ +   E   ++   ++    +  +  PVG    +  QD  +   K +   +   +E
Sbjct  8038  KLEKTEAFLEELQQMRAWVQATMDVLETQGPVGSATSNDEQDSVVVDPKTMNEALKARQE  8217

Query  531   NVSHVNDLARQLT----TLGIQLSPYNLSTLEDLNTRWK  565
             N+  +N L  QLT        QL+      +E LNT W+
Sbjct  8218  NMDSINRLNTQLTAEAQAASRQLADPLREDVERLNTDWE  8334


 Score = 57.4 bits (137),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 69/356 (19%), Positives = 157/356 (44%), Gaps = 30/356 (8%)
 Frame = +1

Query  13    ADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLE----  68
             A +  A   LT WL+ + + +K + + V DL+++ + + + K     + ++R   +    
Sbjct  3358  ARYLEALKALTQWLASVQEALKEEEIFVSDLDELEDQLQRYKEVETTIGEQRSSYDYVNR  3537

Query  69    ---ELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQW  125
                EL+ AA     +TS Q A  I  D + ++   W++V    ++R+  L+  + +   W
Sbjct  3538  TGKELVVAA-----RTSKQ-AENIQKD-VTQLNRNWEDVTRLCEDRKALLDRSINELRLW  3696

Query  126   LEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLAL  185
             L+        +        + +     +D ++ ++ ++K L  D++  Q+N+D   +   
Sbjct  3697  LDEVSGLTSWMDDLDVFFTAEEVAMGDIDVLKDQLDQSKCLEDDIKTLQSNMDNILETGE  3876

Query  186   KLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWL  245
             +L+RD     + +     ++++  W+ +    +E    L E ++  Q    +++   + L
Sbjct  3877  RLIRDGDPAFSSRTRGELDDLHQRWKRVTGLATEHRTNLTEAYQRCQTLKANMQDLGSCL  4056

Query  246   TEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRS  305
                E   +       K+  ++D   ++  +K++     E+EA   V   + E ++K+ +S
Sbjct  4057  DRCEADLD-----PGKKFSIQDPAEIQTQLKKYMSALEELEAKEKVITEIQEVAEKVNQS  4221

Query  306   LEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWL  361
                S+   L++R        W+ +R +       L  +S  WKRL   L E ++W+
Sbjct  4222  ---SEVKTLVER--------WTVMRAQVTAKHKILSDASGSWKRLKQMLTEEVIWM  4356


 Score = 45.8 bits (107),  Expect = 0.15, Method: Compositional matrix adjust.
 Identities = 78/402 (19%), Positives = 156/402 (38%), Gaps = 46/402 (11%)
 Frame = +1

Query  87    RTIITDRIERIQNQWDEVQEHLQNRRQQLNEM----------LKDSTQWLEAKEEAEQVL  136
             R  I D ++R++  W  +    + R  Q              ++D   WL   E   Q  
Sbjct  7285  RKEIQDVMDRLRENWQRLNREYEERHGQFQRCFDQWRQFHCDMRDLASWLSEAERMIQDS  7464

Query  137   GQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDT  196
              +A  +L            I+K       L + +   Q  V   N     ++   S+ D 
Sbjct  7465  KRADGRLH-----------IEKACKHQPVLEEGIATHQAMVASLNSNGEDIVAQSSSVDG  7611

Query  197   RKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQ  256
               +    E +NA W+S+   V+  +   E +   ++ F  +      WL+E +       
Sbjct  7612  GMLQEKLEGLNARWKSVCAEVASWKDRFEFSPEKVEAFMEECSHLQQWLSECQALIR---  7782

Query  257   DATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQ  316
                + + +  D+   KEL+ + ++ + +++   D    ++E+ Q +L     S +  +  
Sbjct  7783  --PQAQPVPADATAFKELILKIKEREEDLQQKADEKQRIEESVQILLSGGSISQERGISI  7956

Query  317   RRLDNMNFK-WSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIG  375
             ++     FK W ++       R+ LE   ++ +     LQ++  W+Q   D L  Q P+G
Sbjct  7957  KKETEALFKLWEKVSGTIPKFRAQLEEKLEKTEAFLEELQQMRAWVQATMDVLETQGPVG  8136

Query  376   GDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEE  435
                      ND   +   + KT    + +  E          ++ + +L  +   L  E 
Sbjct  8137  S-----ATSNDEQDSVVVDPKTMNEALKARQEN---------MDSINRLNTQ---LTAEA  8265

Query  436   RA--QNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLER  475
             +A  + +   LR+  E +NT+WE++   +A  + + D  LER
Sbjct  8266  QAASRQLADPLREDVERLNTDWERIRYLAAHLRPRSDVELER  8391


 Score = 41.2 bits (95),  Expect = 3.3, Method: Compositional matrix adjust.
 Identities = 77/377 (20%), Positives = 170/377 (45%), Gaps = 30/377 (7%)
 Frame = +1

Query  42    DLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQ-  100
             DLE + E +  Q+  MQ L+Q R +  EL   A +++  ++   A       + R  N+ 
Sbjct  3094  DLEPVTEDL--QRIKMQ-LDQCRAKQTELAINASHMERLSTTAAALVTFDSTLSRSTNRD  3264

Query  101   -------WDEVQEHLQNRRQQLNEMLKDS--TQWLEAKEEAEQVLGQARAKLESWKEGPY  151
                    WD  +EHL  R + L E +  +   ++LEA +   Q L   +  L+  +    
Sbjct  3265  LKEFRHLWDTTREHLDEREKLLTEAMNSAPPARYLEALKALTQWLASVQEALKEEEIFVS  3444

Query  152   TVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENI---NA  208
              +D ++ ++   K++   + + +++ D  N    +L+   +A  +++   I +++   N 
Sbjct  3445  DLDELEDQLQRYKEVETTIGEQRSSYDYVNRTGKELV--VAARTSKQAENIQKDVTQLNR  3618

Query  209   SWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDS  268
             +W  + +   +R+A L+ +   L+ +  ++    +W+ + +         T +E  + D 
Sbjct  3619  NWEDVTRLCEDRKALLDRSINELRLWLDEVSGLTSWMDDLDVF------FTAEEVAMGDI  3780

Query  269   KGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRR--LDNMNFKW  326
               +K+ + Q + L+ +I+       N+ E  ++++R     D A   + R  LD+++ +W
Sbjct  3781  DVLKDQLDQSKCLEDDIKTLQSNMDNILETGERLIRD---GDPAFSSRTRGELDDLHQRW  3951

Query  327   SELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPA-VQKQN  385
               +   +   R++L  +  + + L  ++Q+L   L   + +L          PA +Q Q 
Sbjct  3952  KRVTGLATEHRTNLTEAYQRCQTLKANMQDLGSCLDRCEADLDPGKKFSIQDPAEIQTQL  4131

Query  386   DVHRAFKRELKTKEPVI  402
               + +   EL+ KE VI
Sbjct  4132  KKYMSALEELEAKEKVI  4182


>ref|XM_001918785.1| PREDICTED: Danio rerio hypothetical LOC794967 (LOC794967), mRNA
Length=2105

 Score = 1092 bits (2825),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 506/585 (86%), Positives = 555/585 (94%), Gaps = 3/585 (0%)
 Frame = +2

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
             NH+TQTTCWDHPKM ELYQSLADLNNVRFSAYRTAMKLRR+QKALCLDLLS+ AAC+A +
Sbjct  140   NHQTQTTCWDHPKMAELYQSLADLNNVRFSAYRTAMKLRRMQKALCLDLLSMPAACEAFE  319

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQN+Q MDI+Q+INCLT+IYDRLEQ+H++LVNVPLCVDMCLNWLLNVYDTGR G+I
Sbjct  320   QHNLKQNEQFMDIVQVINCLTSIYDRLEQQHSSLVNVPLCVDMCLNWLLNVYDTGRAGKI  499

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             R LSFKTGIISLCKAHLEDKYR+LF++VAS+TGFCDQRRLGLLLHD+IQIPRQLGEVASF
Sbjct  500   RTLSFKTGIISLCKAHLEDKYRFLFREVASATGFCDQRRLGLLLHDAIQIPRQLGEVASF  679

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANNKPE+EA++FLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  680   GGSNIEPSVRSCFQFANNKPELEASVFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  859

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKM YPMVEYCTPTTSGEDVRDFAK
Sbjct  860   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMQYPMVEYCTPTTSGEDVRDFAK  1039

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  974
             VLKNKFRTKRYFAKHPRMGYLPVQT+LEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM
Sbjct  1040  VLKNKFRTKRYFAKHPRMGYLPVQTILEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  1219

Query  975   ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE  1034
             EN NGSY+ND++SPNES+DDEHLLIQHYCQSLNQ SPLSQP+SPAQILIS+E+EE+GELE
Sbjct  1220  ENRNGSYVNDNVSPNESMDDEHLLIQHYCQSLNQGSPLSQPQSPAQILISMETEEKGELE  1399

Query  1035  RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ  1094
             R+L DLE+ENR LQAEYDRLK+ H+HKGLSPLPSPP+M+P SPQSPRDAELIAEAKLLRQ
Sbjct  1400  RVLNDLEQENRKLQAEYDRLKKAHDHKGLSPLPSPPQMLPVSPQSPRDAELIAEAKLLRQ  1579

Query  1095  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM  1154
             HKGRLEARMQILEDHNKQLESQL RLRQLLE  Q E+KVNGT +SSPST+  RSD+S   
Sbjct  1580  HKGRLEARMQILEDHNKQLESQLTRLRQLLE--QTESKVNGTALSSPSTASPRSDTSLAS  1753

Query  1155  LLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG  1199
              LRV  SQT+++MG+++L SP QD STGLE+V+EQLNNSFP S+G
Sbjct  1754  -LRVAASQTTETMGDDELSSPTQDASTGLEDVIEQLNNSFPHSQG  1885


 Score = 50.1 bits (118),  Expect = 0.007, Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 27/32 (84%), Gaps = 0/32 (0%)
 Frame = +1

Query  1196  SSRGHNVGSLFHMADDLGRAMESLVSVMTDEE  1227
             S RG NVGSLFHM D++G AMESLV V+T+E+
Sbjct  1900  SMRGPNVGSLFHMVDNIGHAMESLVHVITEEQ  1995


>gb|BC095190.1| Danio rerio dystrophin, mRNA (cDNA clone MGC:110165 IMAGE:7290297), 
complete cds
Length=2137

 Score = 1091 bits (2822),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 505/585 (86%), Positives = 555/585 (94%), Gaps = 3/585 (0%)
 Frame = +2

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
             NH+TQTTCWDHPKM ELYQSLADLNNVRFSAYRTAMKLRR+QKALCLDLLS+ AAC+A +
Sbjct  140   NHQTQTTCWDHPKMAELYQSLADLNNVRFSAYRTAMKLRRMQKALCLDLLSMPAACEAFE  319

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQN+Q MDI+Q+INCLT+IYDRLEQ+H++LVNVPLCVDMCLNWLLNVYDTGR G+I
Sbjct  320   QHNLKQNEQFMDIVQVINCLTSIYDRLEQQHSSLVNVPLCVDMCLNWLLNVYDTGRAGKI  499

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             R LSFKTGIISLCKAHLEDKYR+LF++VAS+TGFCDQRRLGLLLHD+IQIPRQLGEVASF
Sbjct  500   RTLSFKTGIISLCKAHLEDKYRFLFREVASATGFCDQRRLGLLLHDAIQIPRQLGEVASF  679

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANNKPE+EA++FLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  680   GGSNIEPSVRSCFQFANNKPELEASVFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  859

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKM YPMVEYCTPTTSGEDVRDFAK
Sbjct  860   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMQYPMVEYCTPTTSGEDVRDFAK  1039

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  974
             VLKNKFRT+RYFAKHPRMGYLPVQT+LEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM
Sbjct  1040  VLKNKFRTERYFAKHPRMGYLPVQTILEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  1219

Query  975   ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELE  1034
             EN NGSY+ND++SPNES+DDEHLLIQHYCQSLNQ SPLSQP+SPAQILIS+E+EE+GELE
Sbjct  1220  ENRNGSYVNDNVSPNESMDDEHLLIQHYCQSLNQGSPLSQPQSPAQILISMETEEKGELE  1399

Query  1035  RILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ  1094
             R+L DLE+ENR LQAEYDRLK+ H+HKGLSPLPSPP+M+P SPQSPRDAELIAEAKLLRQ
Sbjct  1400  RVLYDLEQENRKLQAEYDRLKKAHDHKGLSPLPSPPQMLPVSPQSPRDAELIAEAKLLRQ  1579

Query  1095  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM  1154
             HKGRLEARMQILEDHNKQLESQL RLRQLLE  Q E+KVNGT +SSPST+  RSD+S   
Sbjct  1580  HKGRLEARMQILEDHNKQLESQLTRLRQLLE--QTESKVNGTALSSPSTASPRSDTSLAS  1753

Query  1155  LLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG  1199
              LRV  SQT+++MG+++L SP QD STGLE+V+EQLNNSFP S+G
Sbjct  1754  -LRVAASQTTETMGDDELSSPTQDASTGLEDVIEQLNNSFPHSQG  1885


 Score = 50.1 bits (118),  Expect = 0.007, Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 27/32 (84%), Gaps = 0/32 (0%)
 Frame = +1

Query  1196  SSRGHNVGSLFHMADDLGRAMESLVSVMTDEE  1227
             S RG NVGSLFHM D++G AMESLV V+T+E+
Sbjct  1900  SMRGPNVGSLFHMVDNIGHAMESLVHVITEEQ  1995


>ref|XM_001060977.1| PREDICTED: Rattus norvegicus similar to dystrophin, muscular 
dystrophy (LOC682316), mRNA
Length=7725

 Score = 1081 bits (2796),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 534/573 (93%), Positives = 553/573 (96%), Gaps = 0/573 (0%)
 Frame = +1

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             MPSSL+LEVPALADFNRAWTELTDWLSLLD+VIKSQRVMVGDLEDINEMIIKQKAT+QDL
Sbjct  6001  MPSSLLLEVPALADFNRAWTELTDWLSLLDRVIKSQRVMVGDLEDINEMIIKQKATLQDL  6180

Query  61    EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
             EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQ QWDEVQE LQNRRQQLNEMLK
Sbjct  6181  EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQIQWDEVQEQLQNRRQQLNEMLK  6360

Query  121   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
             DSTQWLEAKEEAEQV+GQAR KL+SWKEGP+T+DAIQKKITETKQLAKDLRQ Q NVDVA
Sbjct  6361  DSTQWLEAKEEAEQVIGQARGKLDSWKEGPHTMDAIQKKITETKQLAKDLRQRQINVDVA  6540

Query  181   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
             NDLALKLLRDYSADDTRKVHMITENIN SW +I KRVSEREAALEET RLLQQFPLDLEK
Sbjct  6541  NDLALKLLRDYSADDTRKVHMITENINTSWGNILKRVSEREAALEETQRLLQQFPLDLEK  6720

Query  241   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
             FLAW+TEAETTANVLQDA+RKE+LLEDS+GV+ELMK WQDLQGEIEAHTD+YHNLDEN Q
Sbjct  6721  FLAWITEAETTANVLQDASRKEKLLEDSRGVRELMKPWQDLQGEIEAHTDIYHNLDENGQ  6900

Query  301   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
             KILRSLEGSD+A LLQRRLDNMNFKWSELRKKSLNIRSHLE SSDQWKRLHLSLQELLVW
Sbjct  6901  KILRSLEGSDEAPLLQRRLDNMNFKWSELRKKSLNIRSHLEVSSDQWKRLHLSLQELLVW  7080

Query  361   LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
             LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG
Sbjct  7081  LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  7260

Query  421   LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
             LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEW+KLNLHSADWQRKIDE LERLQELQ
Sbjct  7261  LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWDKLNLHSADWQRKIDEALERLQELQ  7440

Query  481   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLAR  540
             EA DELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENV+HVNDLA 
Sbjct  7441  EAADELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVNHVNDLAH  7620

Query  541   QLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVED  573
              LTTLGIQLSPYNLS LEDLNTRW+LLQ  V+D
Sbjct  7621  HLTTLGIQLSPYNLSILEDLNTRWRLLQSVVQD  7719


 Score = 41.6 bits (96),  Expect = 2.7, Method: Compositional matrix adjust.
 Identities = 75/371 (20%), Positives = 157/371 (42%), Gaps = 52/371 (14%)
 Frame = +1

Query  154   DAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSI  213
             + +++++ + + L   L++ Q   +  N    ++ +   ++ ++K     E +   W+ +
Sbjct  2173  EIMEERLGKLQALQSSLKEQQNGFNYLNATVKEIAKKAPSEISQKYQSEFEEVEGRWKKL  2352

Query  214   HKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER--LLEDSKGV  271
               ++ E    LEE    L++F    +    W+ E         D   KE    L D++ +
Sbjct  2353  STQLVEHCQKLEEHMNKLRKFQNHKKTLQKWMAEV--------DVFLKEEWPALGDAEIL  2508

Query  272   KELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRK  331
             K+ +KQ + L G+I+      ++++E  QKI +S    + A  L++ L  +N +W  + +
Sbjct  2509  KKQLKQCRLLVGDIQTIQPSLNSVNEGGQKI-KSEAEFEFASRLEKELKELNTQWDHICR  2685

Query  332   KSLNIRSHLEASSDQWKRLHLSLQELLVWL-QLKDDELSRQAPIGGDFPAVQKQNDVHRA  390
             +    +  L+A  D+   L   L E+  W+ Q +++ L R               ++ RA
Sbjct  2686  QVYTRKEALKAGLDKTVSLQKDLSEMHEWMTQAEEEYLERDFEYKTPDELQTAVEEMKRA  2865

Query  391   FKRELKTKEPVIMSTLETVRIFLTEQP-------------------------------LE  419
              K E   KE  +    ETV   +++ P                               LE
Sbjct  2866  -KEEALQKEAKVKLLTETVNSVISQAPPAAQEALKKELETLTTNYQWLCTRLNGKCKTLE  3042

Query  420   GLEKLYQEPRELPPEER--AQNVT------RLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
              LE L     E P + R  AQ +T       L+ ++ E  N+ W +L+  +   Q+ +++
Sbjct  3043  SLENLMHHSEENPNQIRLLAQTLTDGGVMDELINEELETFNSRWRELHEEAVRKQKLLEQ  3222

Query  472   TLERLQELQEA  482
             +++  QE++++
Sbjct  3223  SIQSAQEIEKS  3255


>gb|U43517.2|SCU43517 Scyliorhinus canicula dystrophin-related protein 2 (DRP2) mRNA, 
partial cds
Length=2502

 Score = 1078 bits (2789),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 520/831 (62%), Positives = 650/831 (78%), Gaps = 3/831 (0%)
 Frame = +1

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  WSE++KKS NIR+ LEA SD   +L LSLQE++ WL LKD+ELS Q P  GD  AV
Sbjct  19    MNLCWSEIKKKSQNIRARLEALSDHSGKLQLSLQEIIDWLTLKDEELSEQLPFTGDVDAV  198

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q+ N+ H AF  ++KTK P I++TLE+ + FL++ PL   E+  Q+ +++ P+++ QNV+
Sbjct  199   QRYNEFHSAFMEDVKTKGPFILATLESAQAFLSQHPLVETEEPAQD-KDMSPKQKIQNVS  375

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL+    D  R I+ T+ERL ELQ A DEL L L QAE ++ SW+
Sbjct  376   RFIWKQANVSSEMWEKLSARCIDRHRHIERTMERLLELQGAMDELSLALDQAEAVRDSWE  555

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
              VGDL IDSLQ+H+E  K  + E+  LK+ ++  NDLA QL    + LS  N   LE+L 
Sbjct  556   TVGDLFIDSLQEHIEPTKVFKEELGALKDGMTIANDLAHQLAISDVHLSTENTQRLEELT  735

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
             +RW+ LQ ++E+R++QL +AHRDFGP SQHFLSTSVQ PWERAISPNKVPYYINH+ QTT
Sbjct  736   SRWQALQTSIEERLKQLQDAHRDFGPGSQHFLSTSVQVPWERAISPNKVPYYINHQGQTT  915

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQSLA LNN++FSAYRTAMKLRR+QKAL LDLLS+++A +   Q+ L+Q+
Sbjct  916   CWDHPKMTELYQSLAALNNIKFSAYRTAMKLRRVQKALRLDLLSMASASNIFTQYKLQQS  1095

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             DQ +D+L+II CLT +YD LEQE   +VNVPL VDMCLNWLLNVYDTGR G+IRVLSFKT
Sbjct  1096  DQTIDVLEIIQCLTAMYDHLEQERGIIVNVPLSVDMCLNWLLNVYDTGRNGKIRVLSFKT  1275

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
             GII+LC + +E+KY+YL+KQV+ ST  CDQR L LLLH++IQIPRQLGEVASFGGSN+E 
Sbjct  1276  GIITLCNSEVEEKYQYLYKQVSDSTSLCDQRHLSLLLHEAIQIPRQLGEVASFGGSNVES  1455

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
             SVRSCF+F N++P IEA  FL+WMRLEPQSMVWLPVLHR+  AE AKHQAKC+ICK+CPI
Sbjct  1456  SVRSCFRFVNDQPIIEATHFLEWMRLEPQSMVWLPVLHRLITAEAAKHQAKCHICKQCPI  1635

Query  862   IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
              GFRYRSLK FN DICQ+CF +GR +KGHK+ YP++EYC PTTSGE+VRDFAK LKNKFR
Sbjct  1636  KGFRYRSLKQFNVDICQTCFLTGRASKGHKLRYPIMEYCAPTTSGENVRDFAKTLKNKFR  1815

Query  922   TKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSY  981
             TK+YF+KHP+ GYLPVQ+V++GD+++TPASSP L H DTHSRIEHYASRLAEME+ N S+
Sbjct  1816  TKQYFSKHPQRGYLPVQSVMDGDSIDTPASSPMLPHADTHSRIEHYASRLAEMESKNCSF  1995

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLE  1041
              + S+SP+ES+DDE L++Q++    +QDS  +   +P Q+L  L++EE+ ELE I+  LE
Sbjct  1996  FSGSLSPDESVDDEQLIVQYFSPETDQDSLQNPSHNPNQLLSVLDTEEKTELEAIIGHLE  2175

Query  1042  EENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEA  1101
              ENR LQ EY RLK QHE   +S   S  E  P+SP SPRD EL+AEA+LLRQHK RLE 
Sbjct  2176  HENRILQEEYRRLKWQHEEAAIS--SSVKEGSPSSPLSPRDTELLAEARLLRQHKTRLET  2349

Query  1102  RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQ  1152
             RMQILEDHNKQLESQL RLR+LL QPQ +++ NG+T SS S S   SD++Q
Sbjct  2350  RMQILEDHNKQLESQLKRLRELLLQPQQDSEKNGSTASSASPSSHHSDNNQ  2502


 Score = 60.5 bits (145),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 32/234 (13%)
 Frame = +1

Query  21   ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
            E+ DWL+L D+ +  Q    GD++ +        A M+D++ + P +   + +AQ   ++
Sbjct  121  EIIDWLTLKDEELSEQLPFTGDVDAVQRYNEFHSAFMEDVKTKGPFILATLESAQAFLSQ  300

Query  81   TSNQEARTIITDR----IERIQN--------------QWDEVQEHLQNRRQQLNEMLKDS  122
                E      D+     ++IQN               W+++     +R + +   ++  
Sbjct  301  HPLVETEEPAQDKDMSPKQKIQNVSRFIWKQANVSSEMWEKLSARCIDRHRHIERTMERL  480

Query  123  TQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVAN  181
             +   A +E    L QA A  +SW+  G   +D++Q+ I  TK   ++L   +  + +AN
Sbjct  481  LELQGAMDELSLALDQAEAVRDSWETVGDLFIDSLQEHIEPTKVFKEELGALKDGMTIAN  660

Query  182  DLALKLLRDYSADDTRKVHMITEN------INASWRSIHKRVSEREAALEETHR  229
            DLA +L           VH+ TEN      + + W+++   + ER   L++ HR
Sbjct  661  DLAHQLA-------ISDVHLSTENTQRLEELTSRWQALQTSIEERLKQLQDAHR  801


>ref|XM_002187321.1| PREDICTED: Taeniopygia guttata similar to Dystrophin related 
protein 2 (LOC100222379), mRNA
Length=2703

 Score = 1025 bits (2649),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 491/880 (55%), Positives = 661/880 (75%), Gaps = 14/880 (1%)
 Frame = +1

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E++KKS ++R+ LEA SD   +L + LQE++ WL  KD+ELS Q P+ GD   V
Sbjct  82    MNLCWNEIKKKSHSLRARLEAFSDHSGKLQVPLQEIIDWLGQKDEELSAQLPLRGDVLLV  261

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q++ + H AF  E+K++ P I S LE+ + FL++ P E LE+   E +++ P  R QN++
Sbjct  262   QQEKETHTAFMEEVKSRGPYIYSVLESAQAFLSQHPFEELEEPTLESKDVSPRHRIQNIS  441

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R I+ TLE+L E++ A +EL + L QAE ++ +W+
Sbjct  442   RFVWKQANVASELWEKLTARCVDQHRHIERTLEQLLEIKGAMEELSMTLDQAESVRETWE  621

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             P+GDL IDSL +H++  K  + E++P+K+ V  VNDLA QL    + L   N  TLE +N
Sbjct  622   PIGDLFIDSLPEHIQSTKLFKEELSPVKDGVKVVNDLAHQLAISDVHLCMENSRTLEQIN  801

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
             TRWK LQ ++ +R++QL +AHRDFGP SQHFLS+SVQ PWERAISPNKVPYYINH+ QTT
Sbjct  802   TRWKQLQASINERLKQLQDAHRDFGPGSQHFLSSSVQVPWERAISPNKVPYYINHQAQTT  981

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQ+LADLNN++FSAYRTAMKLRR+QKAL LD+++L+ A +  ++H+L+ +
Sbjct  982   CWDHPKMTELYQTLADLNNIKFSAYRTAMKLRRVQKALRLDMVTLATALEIFNEHDLQPS  1161

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             D+ MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LNWLLNV+D+GR+G++R LSFKT
Sbjct  1162  DRAMDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLNWLLNVFDSGRSGKMRALSFKT  1341

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
             GI  LC   +++K++YLF QVA++ G CDQR LG+LLH++IQ+PRQLGEVA+FGGSN+EP
Sbjct  1342  GIACLCGTEVKEKFQYLFSQVANAGGLCDQRHLGVLLHEAIQVPRQLGEVAAFGGSNVEP  1521

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
             S+RSCF+F+N K  IEA+ FL+W  LEPQSMVWL VLHRVA AE  KHQ KC++C++CPI
Sbjct  1522  SIRSCFRFSNGKSAIEASQFLEWANLEPQSMVWLAVLHRVAMAEQVKHQTKCSVCRQCPI  1701

Query  862   IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
              GFRYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TPTTS E++RDFA  LKNKFR
Sbjct  1702  KGFRYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPTTSSENMRDFATTLKNKFR  1881

Query  922   TKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSY  981
             +K+YF+KHP+ GYLPVQ+VLE D  ETPASSP L H DTHSRIEH+ASRLAEME+ N S+
Sbjct  1882  SKQYFSKHPQRGYLPVQSVLEADFSETPASSPMLPHADTHSRIEHFASRLAEMESQNCSF  2061

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLS--QPRSPAQILISLESEERGELERILAD  1039
              +DS+SP++S+D++  L++H        SP++  +P    Q+   L  +++GELER+LA 
Sbjct  2062  FSDSLSPDDSLDEDQYLLRH-------SSPITDREPGGSQQLPGGLNMDDKGELERVLAH  2220

Query  1040  LEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRL  1099
             LE+ENR LQ E  RLK QH+    S  PS     P S Q PR+ EL+AEA++LRQHK RL
Sbjct  2221  LEDENRILQGELRRLKWQHDEAVES--PSLATGSPGSVQDPRNEELLAEARILRQHKSRL  2394

Query  1100  EARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVV  1159
             E RMQILEDHNKQLESQLHRLR+LL QP AE++ NG+  SS ++S  +S+ SQ    +  
Sbjct  2395  ETRMQILEDHNKQLESQLHRLRELLLQPPAESEGNGSAASSLASSPHQSEGSQA---KEK  2565

Query  1160  GSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG  1199
                T D+   +++ +  Q+ S  LE++ME+L ++FP+SRG
Sbjct  2566  EHNTPDTETADEVEAKTQEVSMCLEDIMEKLRSAFPTSRG  2685


 Score = 57.8 bits (138),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 33/235 (14%)
 Frame = +1

Query  21   ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
            E+ DWL   D+ + +Q  + GD+  + +      A M++++ R P +  ++ +AQ   ++
Sbjct  184  EIIDWLGQKDEELSAQLPLRGDVLLVQQEKETHTAFMEEVKSRGPYIYSVLESAQAFLSQ  363

Query  81   TSNQEAR--TIITDRI---ERIQN--------------QWDEVQEHLQNRRQQLNEMLKD  121
               +E    T+ +  +    RIQN               W+++     ++ + +   L+ 
Sbjct  364  HPFEELEEPTLESKDVSPRHRIQNISRFVWKQANVASELWEKLTARCVDQHRHIERTLEQ  543

Query  122  STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              +   A EE    L QA +  E+W+  G   +D++ + I  TK   ++L   +  V V 
Sbjct  544  LLEIKGAMEELSMTLDQAESVRETWEPIGDLFIDSLPEHIQSTKLFKEELSPVKDGVKVV  723

Query  181  NDLALKLLRDYSADDTRKVHMITEN------INASWRSIHKRVSEREAALEETHR  229
            NDLA +L           VH+  EN      IN  W+ +   ++ER   L++ HR
Sbjct  724  NDLAHQLA-------ISDVHLCMENSRTLEQINTRWKQLQASINERLKQLQDAHR  867


>gb|U43519.1|HSU43519 Human dystrophin-related protein 2 (DRP2) mRNA, complete cds
Length=3499

 Score = 1005 bits (2598),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 498/884 (56%), Positives = 656/884 (74%), Gaps = 16/884 (1%)
 Frame = +1

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E++KKS N+R+ LEA SD   +L L LQE++ WL  KD+ELS Q P+ GD   V
Sbjct  553   MNLCWNEIKKKSHNLRARLEAFSDHSGKLQLPLQEIIDWLSQKDEELSAQLPLQGDVALV  732

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q++ + H AF  E+K++ P I S LE+ + FL++ P E LE+ + E ++  P++R QN++
Sbjct  733   QQEKETHAAFMEEVKSRAPYIYSVLESAQAFLSQHPFEELEEPHSESKDTSPKQRIQNLS  912

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R I+ TLE+L E+Q A +EL   L QAE ++ +W+
Sbjct  913   RFVWKQATVASELWEKLTARCVDQHRHIERTLEQLLEIQGAMEELSTTLSQAEGVRATWE  1092

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             P+GDL IDSL +H++ +K  + E +P+K+ V  VNDLA QL    + LS  N   LE +N
Sbjct  1093  PIGDLFIDSLPEHIQAIKLFKEEFSPMKDGVKLVNDLAHQLAISDVHLSMENSQALEQIN  1272

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
              RWK LQ +V++R++QL +AHRDFGP SQHFLS+SVQ PWERAISPNKVPYYINH+ QTT
Sbjct  1273  VRWKQLQASVDERLKQLQDAHRDFGPGSQHFLSSSVQVPWERAISPNKVPYYINHQAQTT  1452

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQ+LADLNN++FSAYRTAMKLRR+QKAL LDL++L+ A +  ++H+L+ +
Sbjct  1453  CWDHPKMTELYQTLADLNNIKFSAYRTAMKLRRVQKALRLDLVTLTTALEIFNEHDLQAS  1632

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             +  MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LNWLLNV+D+GR+G++R LSFKT
Sbjct  1633  EHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLNWLLNVFDSGRSGKMRALSFKT  1812

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
             GI  LC   +++K +YLF QVA+S   CDQR LG+LLH++IQ+PRQLGEVA+FGGSN+EP
Sbjct  1813  GIACLCGTEVKEKLQYLFSQVANSGSQCDQRHLGVLLHEAIQVPRQLGEVAAFGGSNVEP  1992

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
             SVRSCF+F+  KP IEA+ FL+W+ LEPQSMVWLPVLHRV  AE  KHQ KC+IC++CPI
Sbjct  1993  SVRSCFRFSTGKPVIEASQFLEWVNLEPQSMVWLPVLHRVTIAEQVKHQTKCSICRQCPI  2172

Query  862   IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
              GFRYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TPTTS E++RDFA  LKNKFR
Sbjct  2173  KGFRYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPTTSSENMRDFATTLKNKFR  2352

Query  922   TKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSY  981
             +K YF+KHP+ GYLPVQ+VLE D  ETPASSP   H DTHSRIEH+ASRLAEME+ N S+
Sbjct  2353  SKHYFSKHPQRGYLPVQSVLEADYSETPASSPMWPHADTHSRIEHFASRLAEMESQNCSF  2532

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPA---QILISLESEERGELERILA  1038
              NDS+SP++SID++  L++H        SP++  R PA   Q   S+ +E +GEL++ILA
Sbjct  2533  FNDSLSPDDSIDEDQYLLRH-------SSPITD-REPAFGQQAPCSVATESKGELQKILA  2688

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGR  1098
              LE+ENR LQ E  RLK QHE    +  PS  +    +    R+ EL+AEA++LRQHK R
Sbjct  2689  HLEDENRILQGELRRLKWQHEEAAEA--PSLADGSTEAATDHRNEELLAEARILRQHKSR  2862

Query  1099  LEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRV  1158
             LE RMQILEDHNKQLESQL RLR+LL QP  E+  +G+  SS ++S Q+S+ S P   R 
Sbjct  2863  LETRMQILEDHNKQLESQLQRLRELLLQPPTESDGSGSAGSSLASSPQQSEGSHP---RE  3033

Query  1159  VGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
              G  T D+   +D+ S  QD S  LE++ME+L ++FPS R  +V
Sbjct  3034  KGQTTPDTEAADDVGSKSQDVSLCLEDIMEKLRHAFPSVRSSDV  3165


 Score = 55.8 bits (133),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 100/235 (42%), Gaps = 33/235 (14%)
 Frame = +1

Query  21    ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
             E+ DWLS  D+ + +Q  + GD+  + +      A M++++ R P +  ++ +AQ   ++
Sbjct  655   EIIDWLSQKDEELSAQLPLQGDVALVQQEKETHAAFMEEVKSRAPYIYSVLESAQAFLSQ  834

Query  81    TSNQE-----ARTIITDRIERIQN--------------QWDEVQEHLQNRRQQLNEMLKD  121
                +E     + +  T   +RIQN               W+++     ++ + +   L+ 
Sbjct  835   HPFEELEEPHSESKDTSPKQRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIERTLEQ  1014

Query  122   STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
               +   A EE    L QA     +W+  G   +D++ + I   K   ++    +  V + 
Sbjct  1015  LLEIQGAMEELSTTLSQAEGVRATWEPIGDLFIDSLPEHIQAIKLFKEEFSPMKDGVKLV  1194

Query  181   NDLALKLLRDYSADDTRKVHMITEN------INASWRSIHKRVSEREAALEETHR  229
             NDLA +L           VH+  EN      IN  W+ +   V ER   L++ HR
Sbjct  1195  NDLAHQLA-------ISDVHLSMENSQALEQINVRWKQLQASVDERLKQLQDAHR  1338


>ref|XM_001493019.2| PREDICTED: Equus caballus dystrophin related protein 2 (DRP2), 
mRNA
Length=3631

 Score = 1003 bits (2592),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 497/883 (56%), Positives = 655/883 (74%), Gaps = 14/883 (1%)
 Frame = +1

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E++KKS N+R+ LEA SD   +L L LQE++ WL  KD+ELS Q P+ GD   V
Sbjct  550   MNLCWNEIKKKSHNLRARLEAFSDHSGKLQLPLQEIIDWLSQKDEELSAQLPLRGDVALV  729

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q++ + H AF  ++K++ P I S LE+ + FL++ P E LE+ + E ++  P +R QN++
Sbjct  730   QQEKETHAAFMEDVKSRGPYIYSVLESAQAFLSQHPFEELEEPHSESKDTSPRQRIQNLS  909

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R I+ TLE+L E+Q A +EL   L QAE ++ +W+
Sbjct  910   RFVWKQATVASELWEKLTARCVDQHRHIERTLEQLLEIQGAMEELSTTLTQAEGVRATWE  1089

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             P+GDL IDSL +H++ +K  + E +P+K+ V  VNDLA QL    + LS  N   LE +N
Sbjct  1090  PIGDLFIDSLPEHIQALKLFKEEFSPMKDGVKLVNDLAHQLAISDVHLSMENSRALEQIN  1269

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
              RWK LQ +V +R++QL +AHRDFGP SQHFLS+SVQ PWERAISPNKVPYYINH+ QTT
Sbjct  1270  VRWKQLQGSVGERLKQLQDAHRDFGPGSQHFLSSSVQVPWERAISPNKVPYYINHQAQTT  1449

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQ+LADLNN++FSAYRTAMKLRR+QKAL LDL++L+ A +  ++H+L+ +
Sbjct  1450  CWDHPKMTELYQTLADLNNIKFSAYRTAMKLRRVQKALRLDLVTLTTALEIFNEHDLQAS  1629

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             +  MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LNWLLNV+D+GR+G++R LSFKT
Sbjct  1630  EHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLNWLLNVFDSGRSGKMRALSFKT  1809

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
             GI  LC   +++K +YLF QVA+S   CDQR LG+LLH++IQ+PRQLGEVA+FGGSN+EP
Sbjct  1810  GIACLCGTEVKEKLQYLFSQVANSGSQCDQRHLGVLLHEAIQVPRQLGEVAAFGGSNVEP  1989

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
             SVRSCF+F+  KP IEA+ FL+W+ LEPQSMVWL VLHRV  AE  KHQ KC+IC++CPI
Sbjct  1990  SVRSCFRFSTGKPVIEASQFLEWVNLEPQSMVWLAVLHRVTIAEQVKHQTKCSICRQCPI  2169

Query  862   IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
              GFRYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TPTTS E++RDFA  LKNKFR
Sbjct  2170  KGFRYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPTTSSENMRDFATTLKNKFR  2349

Query  922   TKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSY  981
             +K YF+KHP+ GYLPVQ+VLE D  ETPASSP L H DTHSRIEH+ASRLAEME+ N S+
Sbjct  2350  SKHYFSKHPQRGYLPVQSVLEADYSETPASSPMLPHADTHSRIEHFASRLAEMESQNCSF  2529

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLS--QPRSPAQILISLESEERGELERILAD  1039
              NDS+SP++SID++  L++H        SP++  +P    Q   S+ +E +GELE+ILA 
Sbjct  2530  FNDSLSPDDSIDEDQYLLRH-------SSPITDREPGFGQQAPCSMATESKGELEKILAH  2688

Query  1040  LEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRL  1099
             LE+ENR LQ E  RLK QHE    +  P+  +      Q  R+ EL+AEA++LRQHK RL
Sbjct  2689  LEDENRILQGELRRLKWQHEEAAEA--PTLADGSAEVAQDHRNEELLAEARILRQHKSRL  2862

Query  1100  EARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVV  1159
             E RMQILEDHNKQLESQL RLR+LL QP  E++ NG+  SS ++S Q+S+SS P   +  
Sbjct  2863  ETRMQILEDHNKQLESQLQRLRELLLQPPTESEGNGSAGSSLASSPQQSESSHP---QEK  3033

Query  1160  GSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
             G  T D+   +D+ S  QD S  LE++ME+L ++FPS R  +V
Sbjct  3034  GQTTPDTEAADDVGSKSQDVSLCLEDIMEKLRHAFPSVRSSDV  3162


 Score = 56.6 bits (135),  Expect = 8e-05, Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 100/235 (42%), Gaps = 33/235 (14%)
 Frame = +1

Query  21    ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
             E+ DWLS  D+ + +Q  + GD+  + +      A M+D++ R P +  ++ +AQ   ++
Sbjct  652   EIIDWLSQKDEELSAQLPLRGDVALVQQEKETHAAFMEDVKSRGPYIYSVLESAQAFLSQ  831

Query  81    TSNQE-----ARTIITDRIERIQN--------------QWDEVQEHLQNRRQQLNEMLKD  121
                +E     + +  T   +RIQN               W+++     ++ + +   L+ 
Sbjct  832   HPFEELEEPHSESKDTSPRQRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIERTLEQ  1011

Query  122   STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
               +   A EE    L QA     +W+  G   +D++ + I   K   ++    +  V + 
Sbjct  1012  LLEIQGAMEELSTTLTQAEGVRATWEPIGDLFIDSLPEHIQALKLFKEEFSPMKDGVKLV  1191

Query  181   NDLALKLLRDYSADDTRKVHMITEN------INASWRSIHKRVSEREAALEETHR  229
             NDLA +L           VH+  EN      IN  W+ +   V ER   L++ HR
Sbjct  1192  NDLAHQLA-------ISDVHLSMENSRALEQINVRWKQLQGSVGERLKQLQDAHR  1335


>dbj|AK295843.1| Homo sapiens cDNA FLJ52301 complete cds, highly similar to Dystrophin-related 
protein 2
Length=2921

 Score = 1002 bits (2590),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 497/884 (56%), Positives = 654/884 (73%), Gaps = 16/884 (1%)
 Frame = +1

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E++KKS N+R+ LEA SD   +L L LQE++ WL  KD+ELS Q P+ GD   V
Sbjct  190   MNLCWNEIKKKSHNLRARLEAFSDHSGKLQLPLQEIIDWLSQKDEELSAQLPLQGDVALV  369

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q++ + H AF  E+K++ P I S LE+ + FL++ P E LE+ + E ++  P++R QN++
Sbjct  370   QQEKETHAAFMEEVKSRGPYIYSVLESAQAFLSQHPFEELEEPHSESKDTSPKQRIQNLS  549

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R I+ TLE+L E+Q A +EL   L QAE ++ +W+
Sbjct  550   RFVWKQATVASELWEKLTARCVDQHRHIERTLEQLLEIQGAMEELSTTLSQAEGVRATWE  729

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             P+GDL IDSL +H++ +K  + E +P+K+ V  VNDLA QL    + LS  N   LE +N
Sbjct  730   PIGDLFIDSLPEHIQAIKLFKEEFSPMKDGVKLVNDLAHQLAISDVHLSMENSQALEQIN  909

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
              RWK LQ +V +R++QL +AHRDFGP SQHFLS+SVQ PWERAISPNKVPYYINH+ QTT
Sbjct  910   VRWKQLQASVSERLKQLQDAHRDFGPGSQHFLSSSVQVPWERAISPNKVPYYINHQAQTT  1089

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQ+LADLNN++FSAYRTAMKLRR+QKAL LDL++L+ A +  ++H+L+ +
Sbjct  1090  CWDHPKMTELYQTLADLNNIKFSAYRTAMKLRRVQKALRLDLVTLTTALEIFNEHDLQAS  1269

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             +  MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LNWLLNV+D+GR+G++R LSFKT
Sbjct  1270  EHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLNWLLNVFDSGRSGKMRALSFKT  1449

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
             GI  LC   +++K +YLF QVA+S   CDQR LG+LLH++IQ+PRQLGEVA+FGGSN+EP
Sbjct  1450  GIACLCGTEVKEKLQYLFSQVANSGSQCDQRHLGVLLHEAIQVPRQLGEVAAFGGSNVEP  1629

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
             SVRSCF+F+  KP IEA+ FL+W+ LEPQSMVWL VLHRV  AE  KHQ KC+IC++CPI
Sbjct  1630  SVRSCFRFSTGKPVIEASQFLEWVNLEPQSMVWLAVLHRVTIAEQVKHQTKCSICRQCPI  1809

Query  862   IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
              GFRYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TPTTS E++RDFA  LKNKFR
Sbjct  1810  KGFRYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPTTSSENMRDFATTLKNKFR  1989

Query  922   TKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSY  981
             +K YF+KHP+ GYLPVQ+VLE D  ETPASSP   H DTHSRIEH+ASRLAEME+ N S+
Sbjct  1990  SKHYFSKHPQRGYLPVQSVLEADYSETPASSPMWPHADTHSRIEHFASRLAEMESQNCSF  2169

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPA---QILISLESEERGELERILA  1038
              NDS+SP++SID++  L++H        SP++  R PA   Q   S+ +E +GEL++ILA
Sbjct  2170  FNDSLSPDDSIDEDQYLLRH-------SSPITD-REPAFGQQAPCSVATESKGELQKILA  2325

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGR  1098
              LE+ENR LQ E  RLK QHE    +  PS  +    +    R+ EL+AEA++LRQHK R
Sbjct  2326  HLEDENRILQGELRRLKWQHEEAAEA--PSLADGSTEAATDHRNEELLAEARILRQHKSR  2499

Query  1099  LEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRV  1158
             LE RMQILEDHNKQLESQL RLR+LL QP  E+  +G+  SS ++S Q+S+ S P   R 
Sbjct  2500  LETRMQILEDHNKQLESQLQRLRELLLQPPTESDGSGSAGSSLASSPQQSEGSHP---RE  2670

Query  1159  VGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
              G  T D+   +D+ S  QD S  LE++ME+L ++FPS R  +V
Sbjct  2671  KGQTTPDTEAADDVGSKSQDVSLCLEDIMEKLRHAFPSVRSSDV  2802


 Score = 57.0 bits (136),  Expect = 7e-05, Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
 Frame = +1

Query  21   ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
            E+ DWLS  D+ + +Q  + GD+  + +      A M++++ R P +  ++ +AQ   ++
Sbjct  292  EIIDWLSQKDEELSAQLPLQGDVALVQQEKETHAAFMEEVKSRGPYIYSVLESAQAFLSQ  471

Query  81   TSNQE-----ARTIITDRIERIQN--------------QWDEVQEHLQNRRQQLNEMLKD  121
               +E     + +  T   +RIQN               W+++     ++ + +   L+ 
Sbjct  472  HPFEELEEPHSESKDTSPKQRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIERTLEQ  651

Query  122  STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              +   A EE    L QA     +W+  G   +D++ + I   K   ++    +  V + 
Sbjct  652  LLEIQGAMEELSTTLSQAEGVRATWEPIGDLFIDSLPEHIQAIKLFKEEFSPMKDGVKLV  831

Query  181  NDLALKLLRDYSADDTRKVHMITEN------INASWRSIHKRVSEREAALEETHR  229
            NDLA +L           VH+  EN      IN  W+ +   VSER   L++ HR
Sbjct  832  NDLAHQLA-------ISDVHLSMENSQALEQINVRWKQLQASVSERLKQLQDAHR  975


>gb|BC162218.1| Danio rerio dystrophin related protein 2, mRNA (cDNA clone MGC:193759 
IMAGE:9037842), complete cds
Length=2716

 Score = 1002 bits (2590),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 496/878 (56%), Positives = 640/878 (72%), Gaps = 13/878 (1%)
 Frame = +2

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E+++KS NIR  LEA SD   +L LSLQE++ WL  KD+ELS Q PIGGD  AV
Sbjct  92    MNLCWNEIKRKSHNIRVRLEAFSDNSGKLQLSLQEIIEWLTAKDEELSEQLPIGGDVGAV  271

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q Q + H+AF  ++K++ P I S LE+ + FL + P +  E+   + +E+ P  R  NV+
Sbjct  272   QHQREFHQAFMEDVKSRGPYIYSVLESAQTFLAQHPFQEPEETLPDGKEVSPRRRMLNVS  451

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R ++ TLERL ++Q A +EL   L QAE ++ +W+
Sbjct  452   RSVWKQANVASDLWEKLTARCVDRHRHMERTLERLLQIQAAMEELAAALEQAEGVRDAWE  631

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             PVGDL IDSLQDH++  K  + E++ +KE + H+NDLA +L    + LS  N   LE LN
Sbjct  632   PVGDLFIDSLQDHIDATKLFKEELSQVKEGMKHINDLAHELAISDVHLSMDNARALEHLN  811

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
              RWKLLQ ++E+R++QL +AHRDFGP SQHFLS+SVQ PWERAISPNKVPYYINH+ QTT
Sbjct  812   NRWKLLQGSIEERLKQLQDAHRDFGPGSQHFLSSSVQIPWERAISPNKVPYYINHQAQTT  991

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQ+LADLNN++FSAYRTAMKLR +QKAL LDL  LS+  D   +  L+  
Sbjct  992   CWDHPKMTELYQALADLNNIKFSAYRTAMKLRHVQKALRLDLFKLSSVVDVFREQELQHG  1171

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             +  MD++++I+ LT++Y+RLE+E + L+N+PLCVDMCLNWLLNVYD+GR G++RVLSFK 
Sbjct  1172  EHVMDVVEVIHALTSLYERLEEERSVLINIPLCVDMCLNWLLNVYDSGRNGKMRVLSFKM  1351

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
             G++ LC A +++KY+YLF+QV    G  DQ+ L LLLH++IQ+PRQLGEVA+FGGSN+EP
Sbjct  1352  GLVILCNADIQEKYKYLFRQVCGPGGLTDQKHLSLLLHEAIQVPRQLGEVAAFGGSNVEP  1531

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
             SVRSCF+  + K  IE + FL+WM LEPQS+VWLPVLHRV  AETAKHQA+C ICK+CPI
Sbjct  1532  SVRSCFRMVSGKSAIELSHFLEWMSLEPQSVVWLPVLHRVTVAETAKHQARCYICKQCPI  1711

Query  862   IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
              GFRYRSLK FN DICQ+CF +GR  KG K+HYP++EY TPTTSGE +RDFAK LKNKFR
Sbjct  1712  KGFRYRSLKQFNVDICQTCFLTGRTTKGKKLHYPIMEYYTPTTSGEKMRDFAKTLKNKFR  1891

Query  922   TKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSY  981
             +K+YF+KHP+ GYLPVQ+VLE ++ ETP SSP+L H DTHSRIEH+ASRLAEMEN N S+
Sbjct  1892  SKQYFSKHPQRGYLPVQSVLEVESSETPCSSPRLPHADTHSRIEHFASRLAEMENQNCSF  2071

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLE  1041
               DS+SP+ES+D++  L++H   SL QDSP         +L  L+ ++R EL+R L  LE
Sbjct  2072  FTDSLSPDESLDEDQYLLRHSSPSLEQDSP------HGLMLAQLDCQDREELQRTLHRLE  2233

Query  1042  EENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEA  1101
              ENR LQ EY RLK +HE    S  P   E  P SP   +D EL+AEA++LRQHK RLE 
Sbjct  2234  NENRVLQGEYRRLKWKHEEAAAS--PQLLESGPGSPPGQQDEELLAEARVLRQHKTRLET  2407

Query  1102  RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGS  1161
             RMQILEDHNKQLESQL RLR+LL QP+ +++ NG+  SS S+ +      +P        
Sbjct  2408  RMQILEDHNKQLESQLRRLRELLLQPKDDSEANGSAPSSLSSPVSGGHQGEP-----PSR  2572

Query  1162  QTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG  1199
             +T+D+    + L   QDT   L++V+EQL N FPS  G
Sbjct  2573  ETTDTEAAGEDLDHEQDTVLQLQQVIEQLRNVFPSEPG  2686


 Score = 52.0 bits (123),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 103/232 (44%), Gaps = 27/232 (11%)
 Frame = +2

Query  21   ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
            E+ +WL+  D+ +  Q  + GD+  +       +A M+D++ R P +  ++ +AQ    +
Sbjct  194  EIIEWLTAKDEELSEQLPIGGDVGAVQHQREFHQAFMEDVKSRGPYIYSVLESAQTFLAQ  373

Query  81   TSNQEARTIITDRIE-----RIQNQ--------------WDEVQEHLQNRRQQLNEMLKD  121
               QE    + D  E     R+ N               W+++     +R + +   L+ 
Sbjct  374  HPFQEPEETLPDGKEVSPRRRMLNVSRSVWKQANVASDLWEKLTARCVDRHRHMERTLER  553

Query  122  STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              Q   A EE    L QA    ++W+  G   +D++Q  I  TK   ++L Q +  +   
Sbjct  554  LLQIQAAMEELAAALEQAEGVRDAWEPVGDLFIDSLQDHIDATKLFKEELSQVKEGMKHI  733

Query  181  NDLALKL-LRDY--SADDTRKVHMITENINASWRSIHKRVSEREAALEETHR  229
            NDLA +L + D   S D+ R +    E++N  W+ +   + ER   L++ HR
Sbjct  734  NDLAHELAISDVHLSMDNARAL----EHLNNRWKLLQGSIEERLKQLQDAHR  877


>ref|XM_001092374.1| PREDICTED: Macaca mulatta dystrophin related protein 2 (DRP2), 
mRNA
Length=5387

 Score = 1001 bits (2589),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 499/886 (56%), Positives = 653/886 (73%), Gaps = 20/886 (2%)
 Frame = +3

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E++KKS N+R+ LEA SD   +L L LQE++ WL  KD+ELS Q P+ GD   V
Sbjct  759   MNLCWNEIKKKSHNLRARLEAFSDHSGKLQLPLQEIIDWLSQKDEELSAQLPLQGDVALV  938

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q++ + H AF  E+K++ P I S LE+ + FL++ P E LE+ + E ++  P+ R QN++
Sbjct  939   QQEKETHAAFMEEVKSRGPYIYSVLESAQAFLSQHPFEELEEPHSESKDTSPKRRIQNLS  1118

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R I+ TLE+L E+Q A +EL   L QAE ++ +W+
Sbjct  1119  RFVWKQATVASELWEKLTARCVDQHRHIERTLEQLLEIQGAMEELSTTLSQAEGVRATWE  1298

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             P+GDL IDSL +H++ +K  + E +P+K+ V  VNDLA QL    + LS  N   LE +N
Sbjct  1299  PIGDLFIDSLPEHIQAIKLFKEEFSPMKDGVKLVNDLAHQLAISDVHLSMENSHALEQIN  1478

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
              RWK LQ +V +R++QL +AHRDFGP SQHFLS+SVQ PWERAISPNKVPYYINH+ QTT
Sbjct  1479  VRWKQLQASVSERLKQLQDAHRDFGPGSQHFLSSSVQVPWERAISPNKVPYYINHQAQTT  1658

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQ+LADLNN++FSAYRTAMKLRR+QKAL LDL++L+ A +  ++H+L+ +
Sbjct  1659  CWDHPKMTELYQTLADLNNIKFSAYRTAMKLRRVQKALRLDLVTLTTALEIFNEHDLQAS  1838

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             +  MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LNWLLNV+D+GR+G++R LSFKT
Sbjct  1839  EHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLNWLLNVFDSGRSGKMRALSFKT  2018

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
             GI  LC   +++K +YLF QVA+S   CDQR LG+LLH++IQ+PRQLGEVA+FGGSN+EP
Sbjct  2019  GIACLCGTEVKEKLQYLFSQVANSGSQCDQRHLGVLLHEAIQVPRQLGEVAAFGGSNVEP  2198

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
             SVRSCF+F+  KP IEA+ FL+W+ LEPQSMVWL VLHRV  AE  KHQ KC+IC++CPI
Sbjct  2199  SVRSCFRFSTGKPVIEASQFLEWVNLEPQSMVWLAVLHRVTIAEQVKHQTKCSICRQCPI  2378

Query  862   IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
              GFRYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TPTTS E++RDFA  LKNKFR
Sbjct  2379  KGFRYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPTTSSENMRDFATTLKNKFR  2558

Query  922   TKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSY  981
             +K YF+KHP+ GYLPVQ+VLE D  ETPASSP L H DTHSRIEH+ASRLAEME+ N S+
Sbjct  2559  SKHYFSKHPQRGYLPVQSVLEADYSETPASSPMLPHADTHSRIEHFASRLAEMESQNCSF  2738

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPA---QILISLESEERGELERILA  1038
              NDS+SP++SID++  L++H        SP++  R PA   Q   S+ +E +GEL++ILA
Sbjct  2739  FNDSLSPDDSIDEDQYLLRH-------SSPITD-REPAFGQQAPCSVATESKGELQKILA  2894

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSPL--PSPPEMMPTSPQSPRDAELIAEAKLLRQHK  1096
              LE+ENR LQ E  RLK QHE    +P       E  P      R+ EL+AEA++LRQHK
Sbjct  2895  HLEDENRILQGELRRLKWQHEEAAEAPTLADGSTEAAPDH----RNEELLAEARILRQHK  3062

Query  1097  GRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLL  1156
              RLE RMQILEDHNKQLESQL RLR+LL QP  E+  +G+  SS ++S Q+S+ S P   
Sbjct  3063  SRLETRMQILEDHNKQLESQLQRLRELLLQPPTESDGSGSAGSSLASSPQQSEGSHP---  3233

Query  1157  RVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
             R  G  T D+   +D+ S  QD S  LE++ME+L ++FPS R  +V
Sbjct  3234  REKGQTTPDTEAADDVGSKSQDVSLCLEDIMEKLRHAFPSVRSSDV  3371


 Score = 57.0 bits (136),  Expect = 7e-05, Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 100/235 (42%), Gaps = 33/235 (14%)
 Frame = +3

Query  21    ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
             E+ DWLS  D+ + +Q  + GD+  + +      A M++++ R P +  ++ +AQ   ++
Sbjct  861   EIIDWLSQKDEELSAQLPLQGDVALVQQEKETHAAFMEEVKSRGPYIYSVLESAQAFLSQ  1040

Query  81    TSNQE-----ARTIITDRIERIQN--------------QWDEVQEHLQNRRQQLNEMLKD  121
                +E     + +  T    RIQN               W+++     ++ + +   L+ 
Sbjct  1041  HPFEELEEPHSESKDTSPKRRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIERTLEQ  1220

Query  122   STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
               +   A EE    L QA     +W+  G   +D++ + I   K   ++    +  V + 
Sbjct  1221  LLEIQGAMEELSTTLSQAEGVRATWEPIGDLFIDSLPEHIQAIKLFKEEFSPMKDGVKLV  1400

Query  181   NDLALKLLRDYSADDTRKVHMITEN------INASWRSIHKRVSEREAALEETHR  229
             NDLA +L           VH+  EN      IN  W+ +   VSER   L++ HR
Sbjct  1401  NDLAHQLA-------ISDVHLSMENSHALEQINVRWKQLQASVSERLKQLQDAHR  1544


>ref|NM_001939.2| Homo sapiens dystrophin related protein 2 (DRP2), mRNA
Length=7118

 Score = 1001 bits (2588),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 497/884 (56%), Positives = 654/884 (73%), Gaps = 16/884 (1%)
 Frame = +1

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E++KKS N+R+ LEA SD   +L L LQE++ WL  KD+ELS Q P+ GD   V
Sbjct  604   MNLCWNEIKKKSHNLRARLEAFSDHSGKLQLPLQEIIDWLSQKDEELSAQLPLQGDVALV  783

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q++ + H AF  E+K++ P I S LE+ + FL++ P E LE+ + E ++  P++R QN++
Sbjct  784   QQEKETHAAFMEEVKSRGPYIYSVLESAQAFLSQHPFEELEEPHSESKDTSPKQRIQNLS  963

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R I+ TLE+L E+Q A +EL   L QAE ++ +W+
Sbjct  964   RFVWKQATVASELWEKLTARCVDQHRHIERTLEQLLEIQGAMEELSTTLSQAEGVRATWE  1143

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             P+GDL IDSL +H++ +K  + E +P+K+ V  VNDLA QL    + LS  N   LE +N
Sbjct  1144  PIGDLFIDSLPEHIQAIKLFKEEFSPMKDGVKLVNDLAHQLAISDVHLSMENSQALEQIN  1323

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
              RWK LQ +V +R++QL +AHRDFGP SQHFLS+SVQ PWERAISPNKVPYYINH+ QTT
Sbjct  1324  VRWKQLQASVSERLKQLQDAHRDFGPGSQHFLSSSVQVPWERAISPNKVPYYINHQAQTT  1503

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQ+LADLNN++FSAYRTAMKLRR+QKAL LDL++L+ A +  ++H+L+ +
Sbjct  1504  CWDHPKMTELYQTLADLNNIKFSAYRTAMKLRRVQKALRLDLVTLTTALEIFNEHDLQAS  1683

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             +  MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LNWLLNV+D+GR+G++R LSFKT
Sbjct  1684  EHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLNWLLNVFDSGRSGKMRALSFKT  1863

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
             GI  LC   +++K +YLF QVA+S   CDQR LG+LLH++IQ+PRQLGEVA+FGGSN+EP
Sbjct  1864  GIACLCGTEVKEKLQYLFSQVANSGSQCDQRHLGVLLHEAIQVPRQLGEVAAFGGSNVEP  2043

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
             SVRSCF+F+  KP IEA+ FL+W+ LEPQSMVWL VLHRV  AE  KHQ KC+IC++CPI
Sbjct  2044  SVRSCFRFSTGKPVIEASQFLEWVNLEPQSMVWLAVLHRVTIAEQVKHQTKCSICRQCPI  2223

Query  862   IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
              GFRYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TPTTS E++RDFA  LKNKFR
Sbjct  2224  KGFRYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPTTSSENMRDFATTLKNKFR  2403

Query  922   TKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSY  981
             +K YF+KHP+ GYLPVQ+VLE D  ETPASSP   H DTHSRIEH+ASRLAEME+ N S+
Sbjct  2404  SKHYFSKHPQRGYLPVQSVLEADYSETPASSPMWPHADTHSRIEHFASRLAEMESQNCSF  2583

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPA---QILISLESEERGELERILA  1038
              NDS+SP++SID++  L++H        SP++  R PA   Q   S+ +E +GEL++ILA
Sbjct  2584  FNDSLSPDDSIDEDQYLLRH-------SSPITD-REPAFGQQAPCSVATESKGELQKILA  2739

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGR  1098
              LE+ENR LQ E  RLK QHE    +  PS  +    +    R+ EL+AEA++LRQHK R
Sbjct  2740  HLEDENRILQGELRRLKWQHEEAAEA--PSLADGSTEAATDHRNEELLAEARILRQHKSR  2913

Query  1099  LEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRV  1158
             LE RMQILEDHNKQLESQL RLR+LL QP  E+  +G+  SS ++S Q+S+ S P   R 
Sbjct  2914  LETRMQILEDHNKQLESQLQRLRELLLQPPTESDGSGSAGSSLASSPQQSEGSHP---RE  3084

Query  1159  VGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
              G  T D+   +D+ S  QD S  LE++ME+L ++FPS R  +V
Sbjct  3085  KGQTTPDTEAADDVGSKSQDVSLCLEDIMEKLRHAFPSVRSSDV  3216


 Score = 57.4 bits (137),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
 Frame = +1

Query  21    ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
             E+ DWLS  D+ + +Q  + GD+  + +      A M++++ R P +  ++ +AQ   ++
Sbjct  706   EIIDWLSQKDEELSAQLPLQGDVALVQQEKETHAAFMEEVKSRGPYIYSVLESAQAFLSQ  885

Query  81    TSNQE-----ARTIITDRIERIQN--------------QWDEVQEHLQNRRQQLNEMLKD  121
                +E     + +  T   +RIQN               W+++     ++ + +   L+ 
Sbjct  886   HPFEELEEPHSESKDTSPKQRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIERTLEQ  1065

Query  122   STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
               +   A EE    L QA     +W+  G   +D++ + I   K   ++    +  V + 
Sbjct  1066  LLEIQGAMEELSTTLSQAEGVRATWEPIGDLFIDSLPEHIQAIKLFKEEFSPMKDGVKLV  1245

Query  181   NDLALKLLRDYSADDTRKVHMITEN------INASWRSIHKRVSEREAALEETHR  229
             NDLA +L           VH+  EN      IN  W+ +   VSER   L++ HR
Sbjct  1246  NDLAHQLA-------ISDVHLSMENSQALEQINVRWKQLQASVSERLKQLQDAHR  1389


>gb|BC111695.1| Homo sapiens dystrophin related protein 2, mRNA (cDNA clone MGC:133255 
IMAGE:40036070), complete cds
Length=3191

 Score = 1001 bits (2588),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 497/884 (56%), Positives = 654/884 (73%), Gaps = 16/884 (1%)
 Frame = +3

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E++KKS N+R+ LEA SD   +L L LQE++ WL  KD+ELS Q P+ GD   V
Sbjct  441   MNLCWNEIKKKSHNLRARLEAFSDHSGKLQLPLQEIIDWLSQKDEELSAQLPLQGDVALV  620

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q++ + H AF  E+K++ P I S LE+ + FL++ P E LE+ + E ++  P++R QN++
Sbjct  621   QQEKETHAAFMEEVKSRGPYIYSVLESAQAFLSQHPFEELEEPHSESKDTSPKQRIQNLS  800

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R I+ TLE+L E+Q A +EL   L QAE ++ +W+
Sbjct  801   RFVWKQATVASELWEKLTARCVDQHRHIERTLEQLLEIQGAMEELSTTLSQAEGVRATWE  980

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             P+GDL IDSL +H++ +K  + E +P+K+ V  VNDLA QL    + LS  N   LE +N
Sbjct  981   PIGDLFIDSLPEHIQAIKLFKEEFSPMKDGVKLVNDLAHQLAISDVHLSMENSQALEQIN  1160

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
              RWK LQ +V +R++QL +AHRDFGP SQHFLS+SVQ PWERAISPNKVPYYINH+ QTT
Sbjct  1161  VRWKQLQASVSERLKQLQDAHRDFGPGSQHFLSSSVQVPWERAISPNKVPYYINHQAQTT  1340

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQ+LADLNN++FSAYRTAMKLRR+QKAL LDL++L+ A +  ++H+L+ +
Sbjct  1341  CWDHPKMTELYQTLADLNNIKFSAYRTAMKLRRVQKALRLDLVTLTTALEIFNEHDLQAS  1520

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             +  MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LNWLLNV+D+GR+G++R LSFKT
Sbjct  1521  EHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLNWLLNVFDSGRSGKMRALSFKT  1700

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
             GI  LC   +++K +YLF QVA+S   CDQR LG+LLH++IQ+PRQLGEVA+FGGSN+EP
Sbjct  1701  GIACLCGTEVKEKLQYLFSQVANSGSQCDQRHLGVLLHEAIQVPRQLGEVAAFGGSNVEP  1880

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
             SVRSCF+F+  KP IEA+ FL+W+ LEPQSMVWL VLHRV  AE  KHQ KC+IC++CPI
Sbjct  1881  SVRSCFRFSTGKPVIEASQFLEWVNLEPQSMVWLAVLHRVTIAEQVKHQTKCSICRQCPI  2060

Query  862   IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
              GFRYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TPTTS E++RDFA  LKNKFR
Sbjct  2061  KGFRYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPTTSSENMRDFATTLKNKFR  2240

Query  922   TKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSY  981
             +K YF+KHP+ GYLPVQ+VLE D  ETPASSP   H DTHSRIEH+ASRLAEME+ N S+
Sbjct  2241  SKHYFSKHPQRGYLPVQSVLEADYSETPASSPMWPHADTHSRIEHFASRLAEMESQNCSF  2420

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPA---QILISLESEERGELERILA  1038
              NDS+SP++SID++  L++H        SP++  R PA   Q   S+ +E +GEL++ILA
Sbjct  2421  FNDSLSPDDSIDEDQYLLRH-------SSPITD-REPAFGQQAPCSVATESKGELQKILA  2576

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGR  1098
              LE+ENR LQ E  RLK QHE    +  PS  +    +    R+ EL+AEA++LRQHK R
Sbjct  2577  HLEDENRILQGELRRLKWQHEEAAEA--PSLADGSTEAATDHRNEELLAEARILRQHKSR  2750

Query  1099  LEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRV  1158
             LE RMQILEDHNKQLESQL RLR+LL QP  E+  +G+  SS ++S Q+S+ S P   R 
Sbjct  2751  LETRMQILEDHNKQLESQLQRLRELLLQPPTESDGSGSAGSSLASSPQQSEGSHP---RE  2921

Query  1159  VGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
              G  T D+   +D+ S  QD S  LE++ME+L ++FPS R  +V
Sbjct  2922  KGQTTPDTEAADDVGSKSQDVSLCLEDIMEKLRHAFPSVRSSDV  3053


 Score = 57.4 bits (137),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
 Frame = +3

Query  21    ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
             E+ DWLS  D+ + +Q  + GD+  + +      A M++++ R P +  ++ +AQ   ++
Sbjct  543   EIIDWLSQKDEELSAQLPLQGDVALVQQEKETHAAFMEEVKSRGPYIYSVLESAQAFLSQ  722

Query  81    TSNQE-----ARTIITDRIERIQN--------------QWDEVQEHLQNRRQQLNEMLKD  121
                +E     + +  T   +RIQN               W+++     ++ + +   L+ 
Sbjct  723   HPFEELEEPHSESKDTSPKQRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIERTLEQ  902

Query  122   STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
               +   A EE    L QA     +W+  G   +D++ + I   K   ++    +  V + 
Sbjct  903   LLEIQGAMEELSTTLSQAEGVRATWEPIGDLFIDSLPEHIQAIKLFKEEFSPMKDGVKLV  1082

Query  181   NDLALKLLRDYSADDTRKVHMITEN------INASWRSIHKRVSEREAALEETHR  229
             NDLA +L           VH+  EN      IN  W+ +   VSER   L++ HR
Sbjct  1083  NDLAHQLA-------ISDVHLSMENSQALEQINVRWKQLQASVSERLKQLQDAHR  1226


>gb|DQ443728.1| Danio rerio dystrophin-related protein 2 (DRP2) mRNA, complete 
cds
Length=2979

 Score = 1001 bits (2587),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 496/878 (56%), Positives = 640/878 (72%), Gaps = 13/878 (1%)
 Frame = +1

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E+++KS NIR  LEA SD   +L LSLQE++ WL  KD+ELS Q PIGGD  AV
Sbjct  304   MNLCWNEIKRKSHNIRVRLEAFSDNSGKLQLSLQEIIEWLTAKDEELSEQLPIGGDVGAV  483

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q Q + H+AF  ++K++ P I S LE+ + FL + P +  E+   + +E+ P  R  NV+
Sbjct  484   QHQREFHQAFMEDVKSRGPYIYSVLESAQTFLAQHPFQEPEETLPDGKEVSPRRRMLNVS  663

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R ++ TLERL ++Q A +EL   L QAE ++ +W+
Sbjct  664   RSVWKQANVASDLWEKLTARCVDRHRHMERTLERLLQIQAAMEELAAALEQAEGVRDAWE  843

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             PVGDL IDSLQDH++  K  + E++ +KE + H+NDLA +L    + LS  N   LE LN
Sbjct  844   PVGDLFIDSLQDHIDATKLFKEELSQVKEGMKHINDLAHELAISDVHLSMDNARALEHLN  1023

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
              RWKLLQ ++E+R++QL +AHRDFGP SQHFLS+SVQ PWERAISPNKVPYYINH+ QTT
Sbjct  1024  NRWKLLQGSIEERLKQLQDAHRDFGPGSQHFLSSSVQIPWERAISPNKVPYYINHQAQTT  1203

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQ+LADLNN++FSAYRTAMKLR +QKAL LDL  LS+  D   +  L+  
Sbjct  1204  CWDHPKMTELYQALADLNNIKFSAYRTAMKLRHVQKALRLDLFKLSSVVDVFREQELQHG  1383

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             +  MD++++I+ LT++Y+RLE+E + L+N+PLCVDMCLNWLLNVYD+GR G++RVLSFK 
Sbjct  1384  EHVMDVVEVIHALTSLYERLEEERSVLINIPLCVDMCLNWLLNVYDSGRNGKMRVLSFKM  1563

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
             G++ LC A +++KY+YLF+QV    G  DQ+ L LLLH++IQ+PRQLGEVA+FGGSN+EP
Sbjct  1564  GLVILCNADIQEKYKYLFRQVCGPGGLTDQKHLSLLLHEAIQVPRQLGEVAAFGGSNVEP  1743

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
             SVRSCF+  + K  IE + FL+WM LEPQS+VWLPVLHRV  AETAKHQA+C ICK+CPI
Sbjct  1744  SVRSCFRMVSGKSAIELSHFLEWMSLEPQSVVWLPVLHRVTVAETAKHQARCYICKQCPI  1923

Query  862   IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
              GFRYRSLK FN DICQ+CF +GR  KG K+HYP++EY TPTTSGE +RDFAK LKNKFR
Sbjct  1924  KGFRYRSLKQFNVDICQTCFLTGRTTKGKKLHYPIMEYYTPTTSGEKMRDFAKTLKNKFR  2103

Query  922   TKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSY  981
             +K+YF+KHP+ GYLPVQ+VLE ++ ETP SSP+L H DTHSRIEH+ASRLAEMEN N S+
Sbjct  2104  SKQYFSKHPQRGYLPVQSVLEVESSETPCSSPRLPHADTHSRIEHFASRLAEMENQNCSF  2283

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLE  1041
               DS+SP+ES+D++  L++H   SL QDSP         +L  L+ ++R EL+R L  LE
Sbjct  2284  FTDSLSPDESLDEDQYLLRHSSPSLEQDSP------HGLMLAQLDCQDREELQRTLHRLE  2445

Query  1042  EENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEA  1101
              ENR LQ EY RLK +HE    S  P   E  P SP   +D EL+AEA++LRQHK RLE 
Sbjct  2446  NENRVLQGEYRRLKWKHEEAAAS--PQLLESGPGSPPGQQDEELLAEARVLRQHKTRLET  2619

Query  1102  RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGS  1161
             RMQILEDHNKQLESQL RLR+LL QP+ +++ NG+  SS S+ +      +P        
Sbjct  2620  RMQILEDHNKQLESQLRRLRELLLQPKDDSEANGSAPSSLSSPVSGGHQGEP-----PSR  2784

Query  1162  QTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG  1199
             +T+D+    + L   QDT   L++V+EQL N FPS  G
Sbjct  2785  ETTDTEAAGEDLDHEQDTVLQLQQVIEQLRNVFPSEPG  2898


 Score = 52.4 bits (124),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 103/232 (44%), Gaps = 27/232 (11%)
 Frame = +1

Query  21    ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
             E+ +WL+  D+ +  Q  + GD+  +       +A M+D++ R P +  ++ +AQ    +
Sbjct  406   EIIEWLTAKDEELSEQLPIGGDVGAVQHQREFHQAFMEDVKSRGPYIYSVLESAQTFLAQ  585

Query  81    TSNQEARTIITDRIE-----RIQNQ--------------WDEVQEHLQNRRQQLNEMLKD  121
                QE    + D  E     R+ N               W+++     +R + +   L+ 
Sbjct  586   HPFQEPEETLPDGKEVSPRRRMLNVSRSVWKQANVASDLWEKLTARCVDRHRHMERTLER  765

Query  122   STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
               Q   A EE    L QA    ++W+  G   +D++Q  I  TK   ++L Q +  +   
Sbjct  766   LLQIQAAMEELAAALEQAEGVRDAWEPVGDLFIDSLQDHIDATKLFKEELSQVKEGMKHI  945

Query  181   NDLALKL-LRDY--SADDTRKVHMITENINASWRSIHKRVSEREAALEETHR  229
             NDLA +L + D   S D+ R +    E++N  W+ +   + ER   L++ HR
Sbjct  946   NDLAHELAISDVHLSMDNARAL----EHLNNRWKLLQGSIEERLKQLQDAHR  1089


>dbj|AB384915.1| Synthetic construct DNA, clone: pF1KB4196, Homo sapiens DRP2 
gene for dystrophin-related protein 2, complete cds, without 
stop codon, in Flexi system
Length=2888

 Score = 1000 bits (2585),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 497/884 (56%), Positives = 654/884 (73%), Gaps = 16/884 (1%)
 Frame = +1

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E++KKS N+R+ LEA SD   +L L LQE++ WL  KD+ELS Q P+ GD   V
Sbjct  244   MNLCWNEIKKKSHNLRARLEAFSDHSGKLQLPLQEIIDWLSQKDEELSAQLPLQGDVALV  423

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q++ + H AF  E+K++ P I S LE+ + FL++ P E LE+ + E ++  P++R QN++
Sbjct  424   QQEKETHAAFMEEVKSRGPYIYSVLESAQAFLSQHPFEELEEPHSESKDTSPKQRIQNLS  603

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R I+ TLE+L E+Q A +EL   L QAE ++ +W+
Sbjct  604   RFVWKQATVASELWEKLTARCVDQHRHIERTLEQLLEIQGAMEELSTTLSQAEGVRATWE  783

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             P+GDL IDSL +H++ +K  + E +P+K+ V  VNDLA QL    + LS  N   LE +N
Sbjct  784   PIGDLFIDSLPEHIQAIKLFKEEFSPMKDGVKLVNDLAHQLAISDVHLSMENSQALEQIN  963

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
              RWK LQ +V +R++QL +AHRDFGP SQHFLS+SVQ PWERAISPNKVPYYINH+ QTT
Sbjct  964   VRWKQLQASVSERLKQLQDAHRDFGPGSQHFLSSSVQVPWERAISPNKVPYYINHQAQTT  1143

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQ+LADLNN++FSAYRTAMKLRR+QKAL LDL++L+ A +  ++H+L+ +
Sbjct  1144  CWDHPKMTELYQTLADLNNIKFSAYRTAMKLRRVQKALRLDLVTLTTALEIFNEHDLQAS  1323

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             +  MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LNWLLNV+D+GR+G++R LSFKT
Sbjct  1324  EHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLNWLLNVFDSGRSGKMRALSFKT  1503

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
             GI  LC   +++K +YLF QVA+S   CDQR LG+LLH++IQ+PRQLGEVA+FGGSN+EP
Sbjct  1504  GIACLCGTEVKEKLQYLFSQVANSGSQCDQRHLGVLLHEAIQVPRQLGEVAAFGGSNVEP  1683

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
             SVRSCF+F+  KP IEA+ FL+W+ LEPQSMVWL VLHRV  AE  KHQ KC+IC++CPI
Sbjct  1684  SVRSCFRFSTGKPVIEASQFLEWVNLEPQSMVWLAVLHRVTIAEQVKHQTKCSICRQCPI  1863

Query  862   IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
              GFRYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TPTTS E++RDFA  LKNKFR
Sbjct  1864  KGFRYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPTTSSENMRDFATTLKNKFR  2043

Query  922   TKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSY  981
             +K YF+KHP+ GYLPVQ+VLE D  ETPASSP   H DTHSRIEH+ASRLAEME+ N S+
Sbjct  2044  SKHYFSKHPQRGYLPVQSVLEADYSETPASSPMWPHADTHSRIEHFASRLAEMESQNCSF  2223

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPA---QILISLESEERGELERILA  1038
              NDS+SP++SID++  L++H        SP++  R PA   Q   S+ +E +GEL++ILA
Sbjct  2224  FNDSLSPDDSIDEDQYLLRH-------SSPITD-REPAFGQQAPCSVATESKGELQKILA  2379

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGR  1098
              LE+ENR LQ E  RLK QHE    +  PS  +    +    R+ EL+AEA++LRQHK R
Sbjct  2380  HLEDENRILQGELRRLKWQHEEAAEA--PSLADGSTEAATDHRNEELLAEARILRQHKSR  2553

Query  1099  LEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRV  1158
             LE RMQILEDHNKQLESQL RLR+LL QP  E+  +G+  SS ++S Q+S+ S P   R 
Sbjct  2554  LETRMQILEDHNKQLESQLQRLRELLLQPPTESDGSGSAGSSLASSPQQSEGSHP---RE  2724

Query  1159  VGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
              G  T D+   +D+ S  QD S  LE++ME+L ++FPS R  +V
Sbjct  2725  KGQTTPDTEAADDVGSKSQDVSLCLEDIMEKLRHAFPSVRSSDV  2856


 Score = 57.4 bits (137),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
 Frame = +1

Query  21    ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
             E+ DWLS  D+ + +Q  + GD+  + +      A M++++ R P +  ++ +AQ   ++
Sbjct  346   EIIDWLSQKDEELSAQLPLQGDVALVQQEKETHAAFMEEVKSRGPYIYSVLESAQAFLSQ  525

Query  81    TSNQE-----ARTIITDRIERIQN--------------QWDEVQEHLQNRRQQLNEMLKD  121
                +E     + +  T   +RIQN               W+++     ++ + +   L+ 
Sbjct  526   HPFEELEEPHSESKDTSPKQRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIERTLEQ  705

Query  122   STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
               +   A EE    L QA     +W+  G   +D++ + I   K   ++    +  V + 
Sbjct  706   LLEIQGAMEELSTTLSQAEGVRATWEPIGDLFIDSLPEHIQAIKLFKEEFSPMKDGVKLV  885

Query  181   NDLALKLLRDYSADDTRKVHMITEN------INASWRSIHKRVSEREAALEETHR  229
             NDLA +L           VH+  EN      IN  W+ +   VSER   L++ HR
Sbjct  886   NDLAHQLA-------ISDVHLSMENSQALEQINVRWKQLQASVSERLKQLQDAHR  1029


>dbj|AK289825.1| Homo sapiens cDNA FLJ75585 complete cds, highly similar to Homo 
sapiens dystrophin related protein 2 (DRP2), mRNA
Length=3581

 Score =  999 bits (2584),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 496/884 (56%), Positives = 653/884 (73%), Gaps = 16/884 (1%)
 Frame = +3

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E++KKS N+R+ LEA SD   +L L LQE++ WL  KD+ELS Q P+ GD   V
Sbjct  492   MNLCWNEIKKKSHNLRARLEAFSDHSGKLQLPLQEIIDWLSQKDEELSAQLPLQGDVALV  671

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q++ + H AF  E+K++ P I S LE+ + FL++ P E LE+ + E ++  P++R QN++
Sbjct  672   QQEKETHAAFMEEVKSRGPYIYSVLESAQAFLSQHPFEELEEPHSESKDTSPKQRIQNLS  851

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R I+ TLE+L E+Q A +EL   L QA  ++ +W+
Sbjct  852   RFVWKQATVASELWEKLTARCVDQHRHIERTLEQLLEIQGAMEELSTTLSQAGGVRATWE  1031

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             P+GDL IDSL +H++ +K  + E +P+K+ V  VNDLA QL    + LS  N   LE +N
Sbjct  1032  PIGDLFIDSLPEHIQAIKLFKEEFSPMKDGVKLVNDLAHQLAISDVHLSMENSQALEQIN  1211

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
              RWK LQ +V +R++QL +AHRDFGP SQHFLS+SVQ PWERAISPNKVPYYINH+ QTT
Sbjct  1212  VRWKQLQASVSERLKQLQDAHRDFGPGSQHFLSSSVQVPWERAISPNKVPYYINHQAQTT  1391

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQ+LADLNN++FSAYRTAMKLRR+QKAL LDL++L+ A +  ++H+L+ +
Sbjct  1392  CWDHPKMTELYQTLADLNNIKFSAYRTAMKLRRVQKALRLDLVTLTTALEIFNEHDLQAS  1571

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             +  MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LNWLLNV+D+GR+G++R LSFKT
Sbjct  1572  EHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLNWLLNVFDSGRSGKMRALSFKT  1751

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
             GI  LC   +++K +YLF QVA+S   CDQR LG+LLH++IQ+PRQLGEVA+FGGSN+EP
Sbjct  1752  GIACLCGTEVKEKLQYLFSQVANSGSQCDQRHLGVLLHEAIQVPRQLGEVAAFGGSNVEP  1931

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
             SVRSCF+F+  KP IEA+ FL+W+ LEPQSMVWL VLHRV  AE  KHQ KC+IC++CPI
Sbjct  1932  SVRSCFRFSTGKPVIEASQFLEWVNLEPQSMVWLAVLHRVTIAEQVKHQTKCSICRQCPI  2111

Query  862   IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
              GFRYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TPTTS E++RDFA  LKNKFR
Sbjct  2112  KGFRYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPTTSSENMRDFATTLKNKFR  2291

Query  922   TKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSY  981
             +K YF+KHP+ GYLPVQ+VLE D  ETPASSP   H DTHSRIEH+ASRLAEME+ N S+
Sbjct  2292  SKHYFSKHPQRGYLPVQSVLEADYSETPASSPMWPHADTHSRIEHFASRLAEMESQNCSF  2471

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPA---QILISLESEERGELERILA  1038
              NDS+SP++SID++  L++H        SP++  R PA   Q   S+ +E +GEL++ILA
Sbjct  2472  FNDSLSPDDSIDEDQYLLRH-------SSPITD-REPAFGQQAPCSVATESKGELQKILA  2627

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGR  1098
              LE+ENR LQ E  RLK QHE    +  PS  +    +    R+ EL+AEA++LRQHK R
Sbjct  2628  HLEDENRILQGELRRLKWQHEEAAEA--PSLADGSTEAATDHRNEELLAEARILRQHKSR  2801

Query  1099  LEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRV  1158
             LE RMQILEDHNKQLESQL RLR+LL QP  E+  +G+  SS ++S Q+S+ S P   R 
Sbjct  2802  LETRMQILEDHNKQLESQLQRLRELLLQPPTESDGSGSAGSSLASSPQQSEGSHP---RE  2972

Query  1159  VGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
              G  T D+   +D+ S  QD S  LE++ME+L ++FPS R  +V
Sbjct  2973  KGQTTPDTEAADDVGSKSQDVSLCLEDIMEKLRHAFPSVRSSDV  3104


 Score = 57.0 bits (136),  Expect = 7e-05, Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
 Frame = +3

Query  21    ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
             E+ DWLS  D+ + +Q  + GD+  + +      A M++++ R P +  ++ +AQ   ++
Sbjct  594   EIIDWLSQKDEELSAQLPLQGDVALVQQEKETHAAFMEEVKSRGPYIYSVLESAQAFLSQ  773

Query  81    TSNQE-----ARTIITDRIERIQN--------------QWDEVQEHLQNRRQQLNEMLKD  121
                +E     + +  T   +RIQN               W+++     ++ + +   L+ 
Sbjct  774   HPFEELEEPHSESKDTSPKQRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIERTLEQ  953

Query  122   STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
               +   A EE    L QA     +W+  G   +D++ + I   K   ++    +  V + 
Sbjct  954   LLEIQGAMEELSTTLSQAGGVRATWEPIGDLFIDSLPEHIQAIKLFKEEFSPMKDGVKLV  1133

Query  181   NDLALKLLRDYSADDTRKVHMITEN------INASWRSIHKRVSEREAALEETHR  229
             NDLA +L           VH+  EN      IN  W+ +   VSER   L++ HR
Sbjct  1134  NDLAHQLA-------ISDVHLSMENSQALEQINVRWKQLQASVSERLKQLQDAHR  1277


>gb|AF195788.1|AF195788 Rattus norvegicus dystrophin-related protein 2 B-form splice 
variant (Drp2) mRNA, complete cds
Length=3073

 Score =  996 bits (2576),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 502/884 (56%), Positives = 654/884 (73%), Gaps = 16/884 (1%)
 Frame = +2

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E++KKS N+R+ LEA SD   +L L LQE++ WL  KD+ELS Q P+ GD   V
Sbjct  434   MNLCWNEIKKKSHNLRARLEAFSDHSGKLQLPLQEIIDWLSQKDEELSAQLPLQGDVALV  613

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q++ + H AF  E+K+K P I S LE+ + FL++ P E LE+ + E ++  P +R QN++
Sbjct  614   QQEKETHAAFMEEVKSKGPYIYSVLESAQAFLSQHPFEELEESHSESKDTSPRQRIQNLS  793

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R I+ TLE L E+Q A +EL   L QAE ++ +W+
Sbjct  794   RFVWKQATVASELWEKLTARCVDQHRHIEHTLEHLLEIQGAMEELSSTLTQAEGVRATWE  973

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             P+GDL IDSL +H++ +K  + E +P+K+ V  VNDLA QL    + LS  N   LE +N
Sbjct  974   PIGDLFIDSLPEHIQAIKLFKEEFSPVKDGVKLVNDLAHQLAISDVHLSMENSRALEQIN  1153

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
              RWK LQV+V +R++QL +AHRDFGP SQHFLSTSVQ PWERAISPNKVPYYINH+ QTT
Sbjct  1154  VRWKQLQVSVAERLKQLQDAHRDFGPGSQHFLSTSVQVPWERAISPNKVPYYINHQAQTT  1333

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQ+LADLNN++FSAYRTAMKLRR+QKAL LDL++L+ A +  ++H+L+ +
Sbjct  1334  CWDHPKMTELYQTLADLNNIKFSAYRTAMKLRRVQKALRLDLVTLTTALEIFNEHDLQAS  1513

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             +  MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LNWLLNV+D+GR+G++R LSFKT
Sbjct  1514  EHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLNWLLNVFDSGRSGKMRALSFKT  1693

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
             GI  LC   +++K +YLF QVA+S   CDQR LG LLH++IQ+PRQLGEVA+FGGSN+EP
Sbjct  1694  GIACLCGTEVKEKLQYLFSQVANSGSKCDQRHLGALLHEAIQVPRQLGEVAAFGGSNVEP  1873

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
             SVRSCF+F+  KP IEA+ FL+W+ LEPQSMVWL VLHRV  AE  KHQ KC+IC++CPI
Sbjct  1874  SVRSCFRFSTGKPVIEASQFLEWVNLEPQSMVWLAVLHRVTVAEQVKHQTKCSICRQCPI  2053

Query  862   IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
              GFRYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TPTTS E++RDFA  LKNKFR
Sbjct  2054  KGFRYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPTTSSENMRDFATTLKNKFR  2233

Query  922   TKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSY  981
             +K+YF+KHP+ GYLPVQ+VLE D  ETPASSP L H DTHSRIEH+ASRLAEME+ N S+
Sbjct  2234  SKQYFSKHPQRGYLPVQSVLESDCSETPASSPMLPHADTHSRIEHFASRLAEMESQNCSF  2413

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPA---QILISLESEERGELERILA  1038
              NDS+SP++SID++  L++H        SP++  R PA   Q   S+ +E +GELE+ILA
Sbjct  2414  FNDSLSPDDSIDEDQYLLRH-------SSPITD-REPAFGQQAPCSMATESKGELEKILA  2569

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGR  1098
              LE+ENR LQ E  RLK QHE    +P  +  E    +    R+ EL+AEA++LRQHK R
Sbjct  2570  HLEDENRILQGELRRLKWQHEEAVEAPTLA--EGSAEATPDHRNEELLAEARILRQHKSR  2743

Query  1099  LEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRV  1158
             LE RMQILEDHNKQLESQL RLR+LL QP  E+  NG+  SS ++S ++S+ S P   R 
Sbjct  2744  LETRMQILEDHNKQLESQLQRLRELLLQPPTESDGNGSAGSSLASSPRQSEGSHP---RE  2914

Query  1159  VGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
              G  T D+   +D+ S  QD S  LE++ME+L ++FPS R  +V
Sbjct  2915  KGQTTPDTEAADDVGSKSQDVSHSLEDIMEKLRHAFPSVRSSDV  3046


 Score = 50.8 bits (120),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 27/232 (11%)
 Frame = +2

Query  21    ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
             E+ DWLS  D+ + +Q  + GD+  + +      A M++++ + P +  ++ +AQ   ++
Sbjct  536   EIIDWLSQKDEELSAQLPLQGDVALVQQEKETHAAFMEEVKSKGPYIYSVLESAQAFLSQ  715

Query  81    TSNQEARTII-----TDRIERIQN--------------QWDEVQEHLQNRRQQLNEMLKD  121
                +E          T   +RIQN               W+++     ++ + +   L+ 
Sbjct  716   HPFEELEESHSESKDTSPRQRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIEHTLEH  895

Query  122   STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
               +   A EE    L QA     +W+  G   +D++ + I   K   ++    +  V + 
Sbjct  896   LLEIQGAMEELSSTLTQAEGVRATWEPIGDLFIDSLPEHIQAIKLFKEEFSPVKDGVKLV  1075

Query  181   NDLALKL-LRDY--SADDTRKVHMITENINASWRSIHKRVSEREAALEETHR  229
             NDLA +L + D   S +++R +    E IN  W+ +   V+ER   L++ HR
Sbjct  1076  NDLAHQLAISDVHLSMENSRAL----EQINVRWKQLQVSVAERLKQLQDAHR  1219


>gb|AF195787.1|AF195787 Rattus norvegicus dystrophin-related protein 2 A-form splice 
variant (Drp2) mRNA, complete cds
Length=3140

 Score =  996 bits (2576),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 502/884 (56%), Positives = 654/884 (73%), Gaps = 16/884 (1%)
 Frame = +3

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E++KKS N+R+ LEA SD   +L L LQE++ WL  KD+ELS Q P+ GD   V
Sbjct  501   MNLCWNEIKKKSHNLRARLEAFSDHSGKLQLPLQEIIDWLSQKDEELSAQLPLQGDVALV  680

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q++ + H AF  E+K+K P I S LE+ + FL++ P E LE+ + E ++  P +R QN++
Sbjct  681   QQEKETHAAFMEEVKSKGPYIYSVLESAQAFLSQHPFEELEESHSESKDTSPRQRIQNLS  860

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R I+ TLE L E+Q A +EL   L QAE ++ +W+
Sbjct  861   RFVWKQATVASELWEKLTARCVDQHRHIEHTLEHLLEIQGAMEELSSTLTQAEGVRATWE  1040

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             P+GDL IDSL +H++ +K  + E +P+K+ V  VNDLA QL    + LS  N   LE +N
Sbjct  1041  PIGDLFIDSLPEHIQAIKLFKEEFSPVKDGVKLVNDLAHQLAISDVHLSMENSRALEQIN  1220

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
              RWK LQV+V +R++QL +AHRDFGP SQHFLSTSVQ PWERAISPNKVPYYINH+ QTT
Sbjct  1221  VRWKQLQVSVAERLKQLQDAHRDFGPGSQHFLSTSVQVPWERAISPNKVPYYINHQAQTT  1400

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQ+LADLNN++FSAYRTAMKLRR+QKAL LDL++L+ A +  ++H+L+ +
Sbjct  1401  CWDHPKMTELYQTLADLNNIKFSAYRTAMKLRRVQKALRLDLVTLTTALEIFNEHDLQAS  1580

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             +  MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LNWLLNV+D+GR+G++R LSFKT
Sbjct  1581  EHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLNWLLNVFDSGRSGKMRALSFKT  1760

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
             GI  LC   +++K +YLF QVA+S   CDQR LG LLH++IQ+PRQLGEVA+FGGSN+EP
Sbjct  1761  GIACLCGTEVKEKLQYLFSQVANSGSKCDQRHLGALLHEAIQVPRQLGEVAAFGGSNVEP  1940

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
             SVRSCF+F+  KP IEA+ FL+W+ LEPQSMVWL VLHRV  AE  KHQ KC+IC++CPI
Sbjct  1941  SVRSCFRFSTGKPVIEASQFLEWVNLEPQSMVWLAVLHRVTVAEQVKHQTKCSICRQCPI  2120

Query  862   IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
              GFRYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TPTTS E++RDFA  LKNKFR
Sbjct  2121  KGFRYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPTTSSENMRDFATTLKNKFR  2300

Query  922   TKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSY  981
             +K+YF+KHP+ GYLPVQ+VLE D  ETPASSP L H DTHSRIEH+ASRLAEME+ N S+
Sbjct  2301  SKQYFSKHPQRGYLPVQSVLESDCSETPASSPMLPHADTHSRIEHFASRLAEMESQNCSF  2480

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPA---QILISLESEERGELERILA  1038
              NDS+SP++SID++  L++H        SP++  R PA   Q   S+ +E +GELE+ILA
Sbjct  2481  FNDSLSPDDSIDEDQYLLRH-------SSPITD-REPAFGQQAPCSMATESKGELEKILA  2636

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGR  1098
              LE+ENR LQ E  RLK QHE    +P  +  E    +    R+ EL+AEA++LRQHK R
Sbjct  2637  HLEDENRILQGELRRLKWQHEEAVEAPTLA--EGSAEATPDHRNEELLAEARILRQHKSR  2810

Query  1099  LEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRV  1158
             LE RMQILEDHNKQLESQL RLR+LL QP  E+  NG+  SS ++S ++S+ S P   R 
Sbjct  2811  LETRMQILEDHNKQLESQLQRLRELLLQPPTESDGNGSAGSSLASSPRQSEGSHP---RE  2981

Query  1159  VGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
              G  T D+   +D+ S  QD S  LE++ME+L ++FPS R  +V
Sbjct  2982  KGQTTPDTEAADDVGSKSQDVSHSLEDIMEKLRHAFPSVRSSDV  3113


 Score = 50.8 bits (120),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 27/232 (11%)
 Frame = +3

Query  21    ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
             E+ DWLS  D+ + +Q  + GD+  + +      A M++++ + P +  ++ +AQ   ++
Sbjct  603   EIIDWLSQKDEELSAQLPLQGDVALVQQEKETHAAFMEEVKSKGPYIYSVLESAQAFLSQ  782

Query  81    TSNQEARTII-----TDRIERIQN--------------QWDEVQEHLQNRRQQLNEMLKD  121
                +E          T   +RIQN               W+++     ++ + +   L+ 
Sbjct  783   HPFEELEESHSESKDTSPRQRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIEHTLEH  962

Query  122   STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
               +   A EE    L QA     +W+  G   +D++ + I   K   ++    +  V + 
Sbjct  963   LLEIQGAMEELSSTLTQAEGVRATWEPIGDLFIDSLPEHIQAIKLFKEEFSPVKDGVKLV  1142

Query  181   NDLALKL-LRDY--SADDTRKVHMITENINASWRSIHKRVSEREAALEETHR  229
             NDLA +L + D   S +++R +    E IN  W+ +   V+ER   L++ HR
Sbjct  1143  NDLAHQLAISDVHLSMENSRAL----EQINVRWKQLQVSVAERLKQLQDAHR  1286


>ref|XM_538105.2| PREDICTED: Canis familiaris similar to Dystrophin-related protein 
2 (LOC480984), mRNA
Length=2874

 Score =  994 bits (2571),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 495/881 (56%), Positives = 652/881 (74%), Gaps = 10/881 (1%)
 Frame = +1

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E++KKS N+R+ LEA SD   +L L LQE++ WL  KD+ELS Q P+ GD   V
Sbjct  235   MNLCWNEIKKKSHNLRARLEAFSDHSGKLQLPLQEIIDWLSQKDEELSAQLPLQGDVALV  414

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q++ + H AF  ++K++ P I S LE+ + FL++ P E LE+   E ++  P +R QN++
Sbjct  415   QQEKETHAAFMEDVKSRGPYIYSVLESAQAFLSQHPFEELEEPRSESKDTSPRQRIQNLS  594

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R I+ TLE+L E+Q A +EL   L QAE ++ +W+
Sbjct  595   RFVWKQATVASELWEKLTARCVDQHRHIEHTLEQLLEIQGAMEELSNTLTQAEGVRATWE  774

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             P+GDL IDSL +H++ +K  + E +P+K+ V  VNDLA QL    + LS  N   LE +N
Sbjct  775   PIGDLFIDSLPEHIQALKLFKEEFSPMKDGVKLVNDLAHQLAISDVHLSMENSRALEQIN  954

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
              RWK LQV++ +R++QL +AHRDFGP SQHFLS+SVQ PWERAISPNKVPYYINH+ QTT
Sbjct  955   IRWKQLQVSIGERLKQLQDAHRDFGPGSQHFLSSSVQVPWERAISPNKVPYYINHQAQTT  1134

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQ+LADLNN++FSAYRTAMKLRR+QKAL LDL++L+ A +  ++H+L+ +
Sbjct  1135  CWDHPKMTELYQTLADLNNIKFSAYRTAMKLRRVQKALRLDLVTLTTALEIFNEHDLQAS  1314

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             +  MD+++II+CLT +Y+RLE+E   LVNVPLCVDM LNWLLNV+D+GR+G++R LSFKT
Sbjct  1315  EHVMDVVEIIHCLTALYERLEEERGILVNVPLCVDMSLNWLLNVFDSGRSGKMRALSFKT  1494

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
             GI  LC   +++K +YLF QVA+S   CDQR LG+LLH++IQ+PRQLGEVA+FGGSN+EP
Sbjct  1495  GIACLCGTEVKEKLQYLFSQVANSGSQCDQRHLGVLLHEAIQVPRQLGEVAAFGGSNVEP  1674

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
             SVRSCF+F+  KP IEA+ FL+W+ LEPQSMVWL VLHRV  AE  KHQ KC+IC++CPI
Sbjct  1675  SVRSCFRFSTGKPVIEASQFLEWVNLEPQSMVWLAVLHRVTIAEQVKHQTKCSICRQCPI  1854

Query  862   IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
              GFRYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TPTTS E++RDFA  LKNKFR
Sbjct  1855  KGFRYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPTTSSENMRDFATTLKNKFR  2034

Query  922   TKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSY  981
             +K YF+KHP+ GYLPVQ+VLE D  ET ASSP L H DTHSRIEH+ASRLAEME+ N S+
Sbjct  2035  SKHYFSKHPQRGYLPVQSVLEADYSETLASSPMLPHADTHSRIEHFASRLAEMESQNCSF  2214

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLE  1041
              NDS+SP++SID++  L++H C  +    P    ++P     S+ +E +G+LE+ILA LE
Sbjct  2215  FNDSLSPDDSIDEDQYLLRH-CSPITDREPTFGQQAPC----SMATENKGDLEKILAHLE  2379

Query  1042  EENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEA  1101
             +ENR LQ+E  RLK QHE    +  P+  E      Q  R+ EL+AEA++LRQHK RLE 
Sbjct  2380  DENRILQSELRRLKWQHEEAVEA--PTLAEGSAELAQDHRNEELLAEARILRQHKSRLET  2553

Query  1102  RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGS  1161
             RMQILEDHNKQLESQL RLR+LL QP  E+  NG+  SS ++S Q+S+ S P   +  G 
Sbjct  2554  RMQILEDHNKQLESQLQRLRELLLQPPTESDGNGSASSSLASSPQQSEGSHP---QEKGQ  2724

Query  1162  QTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
              T D+   +D+ S  QD S  LE++ME+L ++FPS R  +V
Sbjct  2725  TTPDTEAADDVGSKSQDVSLCLEDIMEKLRHAFPSVRSSDV  2847


 Score = 55.8 bits (133),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 27/232 (11%)
 Frame = +1

Query  21    ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
             E+ DWLS  D+ + +Q  + GD+  + +      A M+D++ R P +  ++ +AQ   ++
Sbjct  337   EIIDWLSQKDEELSAQLPLQGDVALVQQEKETHAAFMEDVKSRGPYIYSVLESAQAFLSQ  516

Query  81    TSNQE-----ARTIITDRIERIQN--------------QWDEVQEHLQNRRQQLNEMLKD  121
                +E     + +  T   +RIQN               W+++     ++ + +   L+ 
Sbjct  517   HPFEELEEPRSESKDTSPRQRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIEHTLEQ  696

Query  122   STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
               +   A EE    L QA     +W+  G   +D++ + I   K   ++    +  V + 
Sbjct  697   LLEIQGAMEELSNTLTQAEGVRATWEPIGDLFIDSLPEHIQALKLFKEEFSPMKDGVKLV  876

Query  181   NDLALKL-LRDY--SADDTRKVHMITENINASWRSIHKRVSEREAALEETHR  229
             NDLA +L + D   S +++R +    E IN  W+ +   + ER   L++ HR
Sbjct  877   NDLAHQLAISDVHLSMENSRAL----EQINIRWKQLQVSIGERLKQLQDAHR  1020


>dbj|AK158102.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched 
library, clone:F930029B12 product:dystrophin related protein 
2, full insert sequence
Length=3827

 Score =  993 bits (2567),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 502/886 (56%), Positives = 654/886 (73%), Gaps = 20/886 (2%)
 Frame = +3

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E++KKS N+R+ LEA SD   +L L L+E++ WL  KD+ELS Q P+ GD   V
Sbjct  273   MNLCWNEIKKKSHNLRARLEAFSDLSGKLQLPLREIIDWLSQKDEELSAQLPLQGDVALV  452

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q++ + H AF  E+K+K P I S LE+ + FL++ P E LE+   E ++  P +R QN++
Sbjct  453   QQEKETHAAFMEEVKSKGPYISSVLESAQAFLSQHPFEELEESQSESKDTSPRQRIQNLS  632

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R I+ TLE L E+Q A +EL   L QAE ++ +W+
Sbjct  633   RFVWKQATVASELWEKLTARCVDQHRHIEHTLEHLLEIQGAMEELSSTLTQAEGVRATWE  812

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             P+GDL IDSL +H++ +K  + E +P+K+ V  VNDLA QL    + LS  N   LE +N
Sbjct  813   PIGDLFIDSLPEHIQAIKLFKEEFSPVKDGVKLVNDLAHQLAISDVHLSMENSRALEQIN  992

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
              RWK LQV+V +R++QL +AHRDFGP SQHFLSTSVQ PWERAISPNKVPYYINH+ QTT
Sbjct  993   IRWKQLQVSVAERLKQLQDAHRDFGPGSQHFLSTSVQVPWERAISPNKVPYYINHQAQTT  1172

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQ+LADLNN++FSAYRTAMKLRR+QKAL LDL++L+ A +  ++H+L+ +
Sbjct  1173  CWDHPKMTELYQTLADLNNIKFSAYRTAMKLRRVQKALRLDLVTLTTALEIFNEHDLQAS  1352

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             +  MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LNWLLNV+D+GR+G++R LSFKT
Sbjct  1353  EHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLNWLLNVFDSGRSGKMRALSFKT  1532

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
             GI  LC   +++K +YLF QVA+S   CDQR LG LLH++IQ+PRQLGEVA+FGGSN+EP
Sbjct  1533  GIACLCGTEVKEKLQYLFSQVANSGSQCDQRHLGALLHEAIQVPRQLGEVAAFGGSNVEP  1712

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
             SVRSCF+F+  KP IEA+ FL+W+ LEPQSMVWL VLHRV  AE  KHQ KC+IC++CPI
Sbjct  1713  SVRSCFRFSTGKPVIEASQFLEWVNLEPQSMVWLAVLHRVTIAEQVKHQTKCSICRQCPI  1892

Query  862   IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
              GFRYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TPTTS E++RDFA  LKNKFR
Sbjct  1893  KGFRYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPTTSSENMRDFATTLKNKFR  2072

Query  922   TKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSY  981
             +K+YF+KHP+ GYLPVQ+VLE D  ETPASSP L H DTHSRIEH+ASRLAEME+ N S+
Sbjct  2073  SKQYFSKHPQRGYLPVQSVLESDCSETPASSPMLPHADTHSRIEHFASRLAEMESQNCSF  2252

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPA---QILISLESEERGELERILA  1038
              NDS+SP++SID++  L++H        SP++  R PA   Q   S+ +E +GELE+ILA
Sbjct  2253  FNDSLSPDDSIDEDQYLLRH-------SSPITD-REPAFGQQAPCSMATESKGELEKILA  2408

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSP--LPSPPEMMPTSPQSPRDAELIAEAKLLRQHK  1096
              LE+ENR LQ E  RLK QHE    +P  +    E  P      R+ EL+AEA++LRQHK
Sbjct  2409  HLEDENRILQGELRRLKWQHEEAAEAPTLVEGSAEATPDH----RNEELLAEARILRQHK  2576

Query  1097  GRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLL  1156
              RLE RMQILEDHNKQLESQL RLR+LL QP +E+  NG+  SS ++S ++S+ S P   
Sbjct  2577  SRLETRMQILEDHNKQLESQLQRLRELLLQPPSESDGNGSAGSSLASSPRQSEGSHP---  2747

Query  1157  RVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
             R  G  T D+   +D+ S  QD S  LE++ME+L ++FPS R  +V
Sbjct  2748  REKGQTTPDTEVADDVGSKSQDVSLCLEDIMEKLRHAFPSVRSSDV  2885


 Score = 50.8 bits (120),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 27/232 (11%)
 Frame = +3

Query  21    ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
             E+ DWLS  D+ + +Q  + GD+  + +      A M++++ + P +  ++ +AQ   ++
Sbjct  375   EIIDWLSQKDEELSAQLPLQGDVALVQQEKETHAAFMEEVKSKGPYISSVLESAQAFLSQ  554

Query  81    TSNQEARTII-----TDRIERIQN--------------QWDEVQEHLQNRRQQLNEMLKD  121
                +E          T   +RIQN               W+++     ++ + +   L+ 
Sbjct  555   HPFEELEESQSESKDTSPRQRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIEHTLEH  734

Query  122   STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
               +   A EE    L QA     +W+  G   +D++ + I   K   ++    +  V + 
Sbjct  735   LLEIQGAMEELSSTLTQAEGVRATWEPIGDLFIDSLPEHIQAIKLFKEEFSPVKDGVKLV  914

Query  181   NDLALKL-LRDY--SADDTRKVHMITENINASWRSIHKRVSEREAALEETHR  229
             NDLA +L + D   S +++R +    E IN  W+ +   V+ER   L++ HR
Sbjct  915   NDLAHQLAISDVHLSMENSRAL----EQINIRWKQLQVSVAERLKQLQDAHR  1058


>ref|NM_010078.3| Mus musculus dystrophin related protein 2 (Drp2), mRNA
Length=6983

 Score =  991 bits (2563),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 502/886 (56%), Positives = 654/886 (73%), Gaps = 20/886 (2%)
 Frame = +3

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E++KKS N+R+ LEA SD   +L L L+E++ WL  KD+ELS Q P+ GD   V
Sbjct  471   MNLCWNEIKKKSHNLRARLEAFSDLSGKLQLPLREIIDWLSQKDEELSAQLPLQGDVALV  650

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q++ + H AF  E+K+K P I S LE+ + FL++ P E LE+   E ++  P +R QN++
Sbjct  651   QQEKETHAAFMEEVKSKGPYISSVLESAQAFLSQHPFEELEESQSESKDTSPRQRIQNLS  830

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R I+ TLE L E+Q A +EL   L QAE ++ +W+
Sbjct  831   RFVWKQATVASELWEKLTARCVDQHRHIEHTLEHLLEIQGAMEELSSTLTQAEGVRATWE  1010

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             P+GDL IDSL +H++ +K  + E +P+K+ V  VNDLA QL    + LS  N   LE +N
Sbjct  1011  PIGDLFIDSLPEHIQAIKLFKEEFSPVKDGVKLVNDLAHQLAISDVHLSMENSRALEQIN  1190

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
              RWK LQV+V +R++QL +AHRDFGP SQHFLSTSVQ PWERAISPNKVPYYINH+ QTT
Sbjct  1191  IRWKQLQVSVAERLKQLQDAHRDFGPGSQHFLSTSVQVPWERAISPNKVPYYINHQAQTT  1370

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQ+LADLNN++FSAYRTAMKLRR+QKAL LDL++L+ A +  ++H+L+ +
Sbjct  1371  CWDHPKMTELYQTLADLNNIKFSAYRTAMKLRRVQKALRLDLVTLTTALEIFNEHDLQAS  1550

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             +  MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LNWLLNV+D+GR+G++R LSFKT
Sbjct  1551  EHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLNWLLNVFDSGRSGKMRALSFKT  1730

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
             GI  LC   +++K +YLF QVA+S   CDQR LG LLH++IQ+PRQLGEVA+FGGSN+EP
Sbjct  1731  GIACLCGTEVKEKLQYLFSQVANSGSQCDQRHLGALLHEAIQVPRQLGEVAAFGGSNVEP  1910

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
             SVRSCF+F+  KP IEA+ FL+W+ LEPQSMVWL VLHRV  AE  KHQ KC+IC++CPI
Sbjct  1911  SVRSCFRFSTGKPVIEASQFLEWVNLEPQSMVWLAVLHRVTIAEQVKHQTKCSICRQCPI  2090

Query  862   IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
              GFRYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TPTTS E++RDFA  LKNKFR
Sbjct  2091  KGFRYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPTTSSENMRDFATTLKNKFR  2270

Query  922   TKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSY  981
             +K+YF+KHP+ GYLPVQ+VLE D  ETPASSP L H DTHSRIEH+ASRLAEME+ N S+
Sbjct  2271  SKQYFSKHPQRGYLPVQSVLESDCSETPASSPMLPHADTHSRIEHFASRLAEMESQNCSF  2450

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPA---QILISLESEERGELERILA  1038
              NDS+SP++SID++  L++H        SP++  R PA   Q   S+ +E +GELE+ILA
Sbjct  2451  FNDSLSPDDSIDEDQYLLRH-------SSPITD-REPAFGQQAPCSMATESKGELEKILA  2606

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSP--LPSPPEMMPTSPQSPRDAELIAEAKLLRQHK  1096
              LE+ENR LQ E  RLK QHE    +P  +    E  P      R+ EL+AEA++LRQHK
Sbjct  2607  HLEDENRILQGELRRLKWQHEEAAEAPTLVEGSAEATPDH----RNEELLAEARILRQHK  2774

Query  1097  GRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLL  1156
              RLE RMQILEDHNKQLESQL RLR+LL QP +E+  NG+  SS ++S ++S+ S P   
Sbjct  2775  SRLETRMQILEDHNKQLESQLQRLRELLLQPPSESDGNGSAGSSLASSPRQSEGSHP---  2945

Query  1157  RVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
             R  G  T D+   +D+ S  QD S  LE++ME+L ++FPS R  +V
Sbjct  2946  REKGQTTPDTEVADDVGSKSQDVSLCLEDIMEKLRHAFPSVRSSDV  3083


 Score = 50.8 bits (120),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 27/232 (11%)
 Frame = +3

Query  21    ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
             E+ DWLS  D+ + +Q  + GD+  + +      A M++++ + P +  ++ +AQ   ++
Sbjct  573   EIIDWLSQKDEELSAQLPLQGDVALVQQEKETHAAFMEEVKSKGPYISSVLESAQAFLSQ  752

Query  81    TSNQEARTII-----TDRIERIQN--------------QWDEVQEHLQNRRQQLNEMLKD  121
                +E          T   +RIQN               W+++     ++ + +   L+ 
Sbjct  753   HPFEELEESQSESKDTSPRQRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIEHTLEH  932

Query  122   STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
               +   A EE    L QA     +W+  G   +D++ + I   K   ++    +  V + 
Sbjct  933   LLEIQGAMEELSSTLTQAEGVRATWEPIGDLFIDSLPEHIQAIKLFKEEFSPVKDGVKLV  1112

Query  181   NDLALKL-LRDY--SADDTRKVHMITENINASWRSIHKRVSEREAALEETHR  229
             NDLA +L + D   S +++R +    E IN  W+ +   V+ER   L++ HR
Sbjct  1113  NDLAHQLAISDVHLSMENSRAL----EQINIRWKQLQVSVAERLKQLQDAHR  1256


>gb|BC125347.1| Mus musculus dystrophin related protein 2, mRNA (cDNA clone MGC:159050 
IMAGE:40129862), complete cds
Length=3150

 Score =  991 bits (2563),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 502/886 (56%), Positives = 654/886 (73%), Gaps = 20/886 (2%)
 Frame = +1

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E++KKS N+R+ LEA SD   +L L L+E++ WL  KD+ELS Q P+ GD   V
Sbjct  331   MNLCWNEIKKKSHNLRARLEAFSDLSGKLQLPLREIIDWLSQKDEELSAQLPLQGDVALV  510

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q++ + H AF  E+K+K P I S LE+ + FL++ P E LE+   E ++  P +R QN++
Sbjct  511   QQEKETHAAFMEEVKSKGPYISSVLESAQAFLSQHPFEELEESQSESKDTSPRQRIQNLS  690

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R I+ TLE L E+Q A +EL   L QAE ++ +W+
Sbjct  691   RFVWKQATVASELWEKLTARCVDQHRHIEHTLEHLLEIQGAMEELSSTLTQAEGVRATWE  870

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             P+GDL IDSL +H++ +K  + E +P+K+ V  VNDLA QL    + LS  N   LE +N
Sbjct  871   PIGDLFIDSLPEHIQAIKLFKEEFSPVKDGVKLVNDLAHQLAISDVHLSMENSRALEQIN  1050

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
              RWK LQV+V +R++QL +AHRDFGP SQHFLSTSVQ PWERAISPNKVPYYINH+ QTT
Sbjct  1051  IRWKQLQVSVAERLKQLQDAHRDFGPGSQHFLSTSVQVPWERAISPNKVPYYINHQAQTT  1230

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQ+LADLNN++FSAYRTAMKLRR+QKAL LDL++L+ A +  ++H+L+ +
Sbjct  1231  CWDHPKMTELYQTLADLNNIKFSAYRTAMKLRRVQKALRLDLVTLTTALEIFNEHDLQAS  1410

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             +  MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LNWLLNV+D+GR+G++R LSFKT
Sbjct  1411  EHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLNWLLNVFDSGRSGKMRALSFKT  1590

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
             GI  LC   +++K +YLF QVA+S   CDQR LG LLH++IQ+PRQLGEVA+FGGSN+EP
Sbjct  1591  GIACLCGTEVKEKLQYLFSQVANSGSQCDQRHLGALLHEAIQVPRQLGEVAAFGGSNVEP  1770

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
             SVRSCF+F+  KP IEA+ FL+W+ LEPQSMVWL VLHRV  AE  KHQ KC+IC++CPI
Sbjct  1771  SVRSCFRFSTGKPVIEASQFLEWVNLEPQSMVWLAVLHRVTIAEQVKHQTKCSICRQCPI  1950

Query  862   IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
              GFRYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TPTTS E++RDFA  LKNKFR
Sbjct  1951  KGFRYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPTTSSENMRDFATTLKNKFR  2130

Query  922   TKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSY  981
             +K+YF+KHP+ GYLPVQ+VLE D  ETPASSP L H DTHSRIEH+ASRLAEME+ N S+
Sbjct  2131  SKQYFSKHPQRGYLPVQSVLESDCSETPASSPMLPHADTHSRIEHFASRLAEMESQNCSF  2310

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPA---QILISLESEERGELERILA  1038
              NDS+SP++SID++  L++H        SP++  R PA   Q   S+ +E +GELE+ILA
Sbjct  2311  FNDSLSPDDSIDEDQYLLRH-------SSPITD-REPAFGQQAPCSMATESKGELEKILA  2466

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSP--LPSPPEMMPTSPQSPRDAELIAEAKLLRQHK  1096
              LE+ENR LQ E  RLK QHE    +P  +    E  P      R+ EL+AEA++LRQHK
Sbjct  2467  HLEDENRILQGELRRLKWQHEEAAEAPTLVEGSAEATPDH----RNEELLAEARILRQHK  2634

Query  1097  GRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLL  1156
              RLE RMQILEDHNKQLESQL RLR+LL QP +E+  NG+  SS ++S ++S+ S P   
Sbjct  2635  SRLETRMQILEDHNKQLESQLQRLRELLLQPPSESDGNGSAGSSLASSPRQSEGSHP---  2805

Query  1157  RVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
             R  G  T D+   +D+ S  QD S  LE++ME+L ++FPS R  +V
Sbjct  2806  REKGQTTPDTEVADDVGSKSQDVSLCLEDIMEKLRHAFPSVRSSDV  2943


 Score = 50.8 bits (120),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 27/232 (11%)
 Frame = +1

Query  21    ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
             E+ DWLS  D+ + +Q  + GD+  + +      A M++++ + P +  ++ +AQ   ++
Sbjct  433   EIIDWLSQKDEELSAQLPLQGDVALVQQEKETHAAFMEEVKSKGPYISSVLESAQAFLSQ  612

Query  81    TSNQEARTII-----TDRIERIQN--------------QWDEVQEHLQNRRQQLNEMLKD  121
                +E          T   +RIQN               W+++     ++ + +   L+ 
Sbjct  613   HPFEELEESQSESKDTSPRQRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIEHTLEH  792

Query  122   STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
               +   A EE    L QA     +W+  G   +D++ + I   K   ++    +  V + 
Sbjct  793   LLEIQGAMEELSSTLTQAEGVRATWEPIGDLFIDSLPEHIQAIKLFKEEFSPVKDGVKLV  972

Query  181   NDLALKL-LRDY--SADDTRKVHMITENINASWRSIHKRVSEREAALEETHR  229
             NDLA +L + D   S +++R +    E IN  W+ +   V+ER   L++ HR
Sbjct  973   NDLAHQLAISDVHLSMENSRAL----EQINIRWKQLQVSVAERLKQLQDAHR  1116


>gb|BC125345.1| Mus musculus dystrophin related protein 2, mRNA (cDNA clone MGC:159048 
IMAGE:40129860), complete cds
Length=3147

 Score =  991 bits (2563),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 502/886 (56%), Positives = 654/886 (73%), Gaps = 20/886 (2%)
 Frame = +1

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E++KKS N+R+ LEA SD   +L L L+E++ WL  KD+ELS Q P+ GD   V
Sbjct  331   MNLCWNEIKKKSHNLRARLEAFSDLSGKLQLPLREIIDWLSQKDEELSAQLPLQGDVALV  510

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q++ + H AF  E+K+K P I S LE+ + FL++ P E LE+   E ++  P +R QN++
Sbjct  511   QQEKETHAAFMEEVKSKGPYISSVLESAQAFLSQHPFEELEESQSESKDTSPRQRIQNLS  690

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R I+ TLE L E+Q A +EL   L QAE ++ +W+
Sbjct  691   RFVWKQATVASELWEKLTARCVDQHRHIEHTLEHLLEIQGAMEELSSTLTQAEGVRATWE  870

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             P+GDL IDSL +H++ +K  + E +P+K+ V  VNDLA QL    + LS  N   LE +N
Sbjct  871   PIGDLFIDSLPEHIQAIKLFKEEFSPVKDGVKLVNDLAHQLAISDVHLSMENSRALEQIN  1050

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
              RWK LQV+V +R++QL +AHRDFGP SQHFLSTSVQ PWERAISPNKVPYYINH+ QTT
Sbjct  1051  IRWKQLQVSVAERLKQLQDAHRDFGPGSQHFLSTSVQVPWERAISPNKVPYYINHQAQTT  1230

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQ+LADLNN++FSAYRTAMKLRR+QKAL LDL++L+ A +  ++H+L+ +
Sbjct  1231  CWDHPKMTELYQTLADLNNIKFSAYRTAMKLRRVQKALRLDLVTLTTALEIFNEHDLQAS  1410

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             +  MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LNWLLNV+D+GR+G++R LSFKT
Sbjct  1411  EHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLNWLLNVFDSGRSGKMRALSFKT  1590

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
             GI  LC   +++K +YLF QVA+S   CDQR LG LLH++IQ+PRQLGEVA+FGGSN+EP
Sbjct  1591  GIACLCGTEVKEKLQYLFSQVANSGSQCDQRHLGALLHEAIQVPRQLGEVAAFGGSNVEP  1770

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
             SVRSCF+F+  KP IEA+ FL+W+ LEPQSMVWL VLHRV  AE  KHQ KC+IC++CPI
Sbjct  1771  SVRSCFRFSTGKPVIEASQFLEWVNLEPQSMVWLAVLHRVTIAEQVKHQTKCSICRQCPI  1950

Query  862   IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
              GFRYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TPTTS E++RDFA  LKNKFR
Sbjct  1951  KGFRYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPTTSSENMRDFATTLKNKFR  2130

Query  922   TKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSY  981
             +K+YF+KHP+ GYLPVQ+VLE D  ETPASSP L H DTHSRIEH+ASRLAEME+ N S+
Sbjct  2131  SKQYFSKHPQRGYLPVQSVLESDCSETPASSPMLPHADTHSRIEHFASRLAEMESQNCSF  2310

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPA---QILISLESEERGELERILA  1038
              NDS+SP++SID++  L++H        SP++  R PA   Q   S+ +E +GELE+ILA
Sbjct  2311  FNDSLSPDDSIDEDQYLLRH-------SSPITD-REPAFGQQAPCSMATESKGELEKILA  2466

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSP--LPSPPEMMPTSPQSPRDAELIAEAKLLRQHK  1096
              LE+ENR LQ E  RLK QHE    +P  +    E  P      R+ EL+AEA++LRQHK
Sbjct  2467  HLEDENRILQGELRRLKWQHEEAAEAPTLVEGSAEATPDH----RNEELLAEARILRQHK  2634

Query  1097  GRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLL  1156
              RLE RMQILEDHNKQLESQL RLR+LL QP +E+  NG+  SS ++S ++S+ S P   
Sbjct  2635  SRLETRMQILEDHNKQLESQLQRLRELLLQPPSESDGNGSAGSSLASSPRQSEGSHP---  2805

Query  1157  RVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
             R  G  T D+   +D+ S  QD S  LE++ME+L ++FPS R  +V
Sbjct  2806  REKGQTTPDTEVADDVGSKSQDVSLCLEDIMEKLRHAFPSVRSSDV  2943


 Score = 50.8 bits (120),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 27/232 (11%)
 Frame = +1

Query  21    ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
             E+ DWLS  D+ + +Q  + GD+  + +      A M++++ + P +  ++ +AQ   ++
Sbjct  433   EIIDWLSQKDEELSAQLPLQGDVALVQQEKETHAAFMEEVKSKGPYISSVLESAQAFLSQ  612

Query  81    TSNQEARTII-----TDRIERIQN--------------QWDEVQEHLQNRRQQLNEMLKD  121
                +E          T   +RIQN               W+++     ++ + +   L+ 
Sbjct  613   HPFEELEESQSESKDTSPRQRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIEHTLEH  792

Query  122   STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
               +   A EE    L QA     +W+  G   +D++ + I   K   ++    +  V + 
Sbjct  793   LLEIQGAMEELSSTLTQAEGVRATWEPIGDLFIDSLPEHIQAIKLFKEEFSPVKDGVKLV  972

Query  181   NDLALKL-LRDY--SADDTRKVHMITENINASWRSIHKRVSEREAALEETHR  229
             NDLA +L + D   S +++R +    E IN  W+ +   V+ER   L++ HR
Sbjct  973   NDLAHQLAISDVHLSMENSRAL----EQINIRWKQLQVSVAERLKQLQDAHR  1116


>ref|XM_001364344.1| PREDICTED: Monodelphis domestica similar to FLJ46266 protein 
(LOC100015841), mRNA
Length=2838

 Score =  991 bits (2561),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 495/883 (56%), Positives = 651/883 (73%), Gaps = 20/883 (2%)
 Frame = +1

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E++KKS N+R+ LEA SD   +L   LQE++ WL  KD+ELS Q P+ G    V
Sbjct  217   MNLCWNEIKKKSHNLRARLEAFSDPSGKLQPPLQEIIDWLSQKDEELSAQLPLQGAVALV  396

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             QK+ + H AF  E+K++ P I S LE+ + FL++ P E LE+ + E ++    ++ QN++
Sbjct  397   QKEKETHSAFMEEVKSRGPYIYSVLESAQAFLSQHPFEELEEPHCENKDASARQKIQNLS  576

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R I+ TLE+L E+Q A  EL   L QAE I+ +W+
Sbjct  577   RFVWKQATVASELWEKLTARCVDQHRHIERTLEQLLEIQGAMGELGSTLTQAEGIRATWE  756

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             P+GDL IDSL +H++ +K    E++P+KE V  VN+LA QL    + LS  N   LE +N
Sbjct  757   PIGDLFIDSLPEHIQAIKLFTEELSPVKEGVKLVNELAHQLAISDVHLSMENSRALEQIN  936

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
             TRWK LQ +V +R++QL +AHRDFGP SQHFLSTSVQ PWERAISPNKVPYYINH+ QTT
Sbjct  937   TRWKQLQASVNERLKQLQDAHRDFGPGSQHFLSTSVQVPWERAISPNKVPYYINHQAQTT  1116

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQ+LADLNN++FSAYRTAMKLRR+QKAL LDL++L+ A +  ++H L+ +
Sbjct  1117  CWDHPKMTELYQTLADLNNIKFSAYRTAMKLRRVQKALRLDLVTLNTALEIFNEHELQPS  1296

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             +  MD++++I+CLT++Y+RLE+E   LVNVPLCVDM LNWLLNV+D+GR+G++R LSFKT
Sbjct  1297  EHVMDVVEVIHCLTSLYERLEEERGILVNVPLCVDMSLNWLLNVFDSGRSGKMRALSFKT  1476

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
             GI  LC   +++K++YLF QVA+S   CDQR LG+LLH++IQ+PRQLGEVA+FGGSN+EP
Sbjct  1477  GIACLCGTEVKEKFQYLFSQVATSGSQCDQRHLGVLLHEAIQVPRQLGEVAAFGGSNVEP  1656

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
             SVRSCF+F+  KP IEAA FL+W  LEPQSMVWL VLHRV  AE  KHQ KC+IC++CPI
Sbjct  1657  SVRSCFRFSTGKPVIEAAQFLEWANLEPQSMVWLAVLHRVTIAEQVKHQTKCSICRQCPI  1836

Query  862   IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
              GFRYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TPTTS E+VRDFA  LKNKFR
Sbjct  1837  KGFRYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPTTSSENVRDFATTLKNKFR  2016

Query  922   TKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSY  981
             +K+YF+KHP+ GYLPVQ+VLE D  E PASSP L H DTHSRIEH+ASRLAEME+ N S+
Sbjct  2017  SKQYFSKHPQRGYLPVQSVLEADYSEPPASSPMLPHSDTHSRIEHFASRLAEMESQNCSF  2196

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLS--QPRSPAQILISLESEERGELERILAD  1039
              NDS+SP++SID++  L++H        SP++  +P    Q   ++ ++++GELE+ILA 
Sbjct  2197  FNDSLSPDDSIDEDQYLLRH-------SSPITDREPTFGQQAQSTIIADDKGELEKILAH  2355

Query  1040  LEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRL  1099
             LE+ENR LQ E  RLK QHE      +  PPE+     Q PR+ EL+AEA+LLRQHK RL
Sbjct  2356  LEDENRILQGELRRLKWQHEEA----VEGPPEVA----QDPRNEELLAEARLLRQHKSRL  2511

Query  1100  EARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVV  1159
             E RMQILEDHN+QLESQL RLR+LL QP  E++ NG+  SS ++S Q+S+ S     +  
Sbjct  2512  ETRMQILEDHNRQLESQLLRLRELLLQPPPESEGNGSGGSSLASSPQQSEGSHS---QEK  2682

Query  1160  GSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
                T D+   +D+    QD S  LE++ME+L ++FP+ R  +V
Sbjct  2683  EHTTPDTEAADDMGQKSQDVSLCLEDIMEKLRHAFPNVRSPDV  2811


 Score = 45.4 bits (106),  Expect = 0.17, Method: Compositional matrix adjust.
 Identities = 50/232 (21%), Positives = 102/232 (43%), Gaps = 27/232 (11%)
 Frame = +1

Query  21    ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
             E+ DWLS  D+ + +Q  + G +  + +      A M++++ R P +  ++ +AQ   ++
Sbjct  319   EIIDWLSQKDEELSAQLPLQGAVALVQKEKETHSAFMEEVKSRGPYIYSVLESAQAFLSQ  498

Query  81    TSNQE------------ARTIITDRIERIQNQ-------WDEVQEHLQNRRQQLNEMLKD  121
                +E            AR  I +    +  Q       W+++     ++ + +   L+ 
Sbjct  499   HPFEELEEPHCENKDASARQKIQNLSRFVWKQATVASELWEKLTARCVDQHRHIERTLEQ  678

Query  122   STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
               +   A  E    L QA     +W+  G   +D++ + I   K   ++L   +  V + 
Sbjct  679   LLEIQGAMGELGSTLTQAEGIRATWEPIGDLFIDSLPEHIQAIKLFTEELSPVKEGVKLV  858

Query  181   NDLALKL-LRDY--SADDTRKVHMITENINASWRSIHKRVSEREAALEETHR  229
             N+LA +L + D   S +++R +    E IN  W+ +   V+ER   L++ HR
Sbjct  859   NELAHQLAISDVHLSMENSRAL----EQINTRWKQLQASVNERLKQLQDAHR  1002


>ref|XM_617584.4| PREDICTED: Bos taurus similar to dystrophin related protein 2 
(DRP2), mRNA
Length=3129

 Score =  991 bits (2561),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 498/898 (55%), Positives = 660/898 (73%), Gaps = 18/898 (2%)
 Frame = +3

Query  310   DDAVLLQRRLD--NMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDE  367
             + +V+  R L+   MN  W+E++KKS N+R+ LEA SD   +L L LQE++ WL  KD+E
Sbjct  258   NGSVVAARTLEPPAMNLCWNEIKKKSHNLRARLEAFSDHSGKLQLPLQEIIDWLSQKDEE  437

Query  368   LSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQE  427
             LS Q P+ GD   VQ++ + H AF  ++K++ P I S LE+ + FL++ P + LE+   E
Sbjct  438   LSAQLPLQGDVVLVQQEKETHAAFMEDVKSRGPYIYSVLESAQAFLSQHPFDELEEPRSE  617

Query  428   PRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELD  487
              ++  P +R QN++R + KQA   +  WEKL     D  R I+ TLE+L E+Q A +EL+
Sbjct  618   SKDTSPRQRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIERTLEQLLEIQGAMEELN  797

Query  488   LKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGI  547
               L QAE ++ +W+P+GDL IDSL +H++ +K  + E +P+K+ V  VNDLA QL    +
Sbjct  798   ATLTQAEGVRATWEPIGDLFIDSLPEHIQALKLFKEEFSPMKDGVKLVNDLAHQLAISDV  977

Query  548   QLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISP  607
              LS  N   LE +N RWK LQV+V +R++QL +AHRDFGP SQHFLS+SVQ PWERAISP
Sbjct  978   HLSMENSRALEQINIRWKQLQVSVGERLKQLQDAHRDFGPGSQHFLSSSVQVPWERAISP  1157

Query  608   NKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLS  667
             NKVPYYINH+ QTTCWDHPKMTELYQ+LADLNN++FSAYRTAMKLRR+QKAL LDL++L+
Sbjct  1158  NKVPYYINHQAQTTCWDHPKMTELYQTLADLNNIKFSAYRTAMKLRRVQKALRLDLVTLT  1337

Query  668   AACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYD  727
              A +  ++H+L+ ++  MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LNWLLNV+D
Sbjct  1338  TALEIFNEHDLQASEHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLNWLLNVFD  1517

Query  728   TGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQ  787
             +GR+G++R LSFKTGI  LC   +++K +YLF QVA+S   CDQR LG+LLH++IQ+PRQ
Sbjct  1518  SGRSGKMRALSFKTGIACLCGTEVKEKLQYLFSQVANSGSQCDQRHLGVLLHEAIQVPRQ  1697

Query  788   LGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETA  847
             LGEVA+FGGSN+EPSVRSCF+F+  KP IEA+ FL+W+ LEPQSMVWL VLHRV  AE  
Sbjct  1698  LGEVAAFGGSNVEPSVRSCFRFSTGKPVIEASQFLEWVNLEPQSMVWLAVLHRVTIAEQV  1877

Query  848   KHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGE  907
             KHQ KC+IC++CPI GFRYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TPTTS E
Sbjct  1878  KHQTKCSICRQCPIKGFRYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPTTSSE  2057

Query  908   DVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHY  967
             ++RDFA  LKNKFR+K YF+KHP+ GYLPVQ+VLE D  ETPASSP L H DTHSRIEH+
Sbjct  2058  NMRDFATTLKNKFRSKHYFSKHPQRGYLPVQSVLEADYNETPASSPMLPHADTHSRIEHF  2237

Query  968   ASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPA---QILIS  1024
             ASRLAEME+ N S+ NDS+SP++SID++  L++H        SP++  R PA   Q   +
Sbjct  2238  ASRLAEMESQNCSFFNDSLSPDDSIDEDQYLLRH-------SSPVTD-REPAFRQQAPHN  2393

Query  1025  LESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAE  1084
             + +  +GELE+ILA LE+ENR LQ E  RLK QHE    + +P+  E      Q   + E
Sbjct  2394  MATGSKGELEKILAHLEDENRILQGELRRLKWQHEEA--TEVPALTEGSAEVAQGHCNEE  2567

Query  1085  LIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTS  1144
             L+AEA++LRQHK RLE RMQILEDHNKQLESQL RLR+LL QP  E+  NG+  SS ++S
Sbjct  2568  LLAEARILRQHKSRLETRMQILEDHNKQLESQLQRLRELLLQPPIESNGNGSAGSSLASS  2747

Query  1145  LQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
              Q+S+ S P   +  G  T D+   +D+    QD S  LE++ME+L ++FPS R  +V
Sbjct  2748  PQQSEGSHP---QEKGQTTPDTEAADDVGLKSQDVSLCLEDIMEKLRHAFPSVRSSDV  2912


 Score = 54.3 bits (129),  Expect = 5e-04, Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 103/232 (44%), Gaps = 27/232 (11%)
 Frame = +3

Query  21    ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
             E+ DWLS  D+ + +Q  + GD+  + +      A M+D++ R P +  ++ +AQ   ++
Sbjct  402   EIIDWLSQKDEELSAQLPLQGDVVLVQQEKETHAAFMEDVKSRGPYIYSVLESAQAFLSQ  581

Query  81    TSNQE-----ARTIITDRIERIQN--------------QWDEVQEHLQNRRQQLNEMLKD  121
                 E     + +  T   +RIQN               W+++     ++ + +   L+ 
Sbjct  582   HPFDELEEPRSESKDTSPRQRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIERTLEQ  761

Query  122   STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
               +   A EE    L QA     +W+  G   +D++ + I   K   ++    +  V + 
Sbjct  762   LLEIQGAMEELNATLTQAEGVRATWEPIGDLFIDSLPEHIQALKLFKEEFSPMKDGVKLV  941

Query  181   NDLALKL-LRDY--SADDTRKVHMITENINASWRSIHKRVSEREAALEETHR  229
             NDLA +L + D   S +++R +    E IN  W+ +   V ER   L++ HR
Sbjct  942   NDLAHQLAISDVHLSMENSRAL----EQINIRWKQLQVSVGERLKQLQDAHR  1085


>dbj|AK081426.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched 
library, clone:C130016K19 product:dystrophin related protein 
2, full insert sequence
Length=3753

 Score =  989 bits (2558),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 501/886 (56%), Positives = 653/886 (73%), Gaps = 20/886 (2%)
 Frame = +1

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E++KKS N+R+ LEA SD   +L L L+E++ WL  KD+ELS Q P+ GD   V
Sbjct  415   MNLCWNEIKKKSHNLRARLEAFSDLSGKLQLPLREIIDWLSQKDEELSAQLPLQGDVALV  594

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q++ + H AF  E+K+K P I S LE+ + FL++ P E LE+   E ++  P +R QN++
Sbjct  595   QQEKETHAAFMEEVKSKGPYISSVLESAQAFLSQHPFEELEESQSESKDTSPRQRIQNLS  774

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R I+ TLE L E+Q A +EL   L QAE ++ +W+
Sbjct  775   RFVWKQATVASELWEKLTARCVDQHRHIEHTLEHLLEIQGAMEELSSTLTQAEGVRATWE  954

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             P+GDL IDSL +H++ +K  + E +P+K+ V  VNDLA QL    + LS  N   LE +N
Sbjct  955   PIGDLFIDSLPEHIQAIKLFKEEFSPVKDGVKLVNDLAHQLAISDVHLSMENSRALEQIN  1134

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
              RWK LQV+V +R++QL +AHRDFGP SQHFLSTSVQ PWERA SPNKVPYYINH+ QTT
Sbjct  1135  IRWKQLQVSVAERLKQLQDAHRDFGPGSQHFLSTSVQVPWERAFSPNKVPYYINHQAQTT  1314

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQ+LADLNN++FSAYRTAMKLRR+QKAL LDL++L+ A +  ++H+L+ +
Sbjct  1315  CWDHPKMTELYQTLADLNNIKFSAYRTAMKLRRVQKALRLDLVTLTTALEIFNEHDLQAS  1494

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             +  MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LNWLLNV+D+GR+G++R LSFKT
Sbjct  1495  EHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLNWLLNVFDSGRSGKMRALSFKT  1674

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
             GI  LC   +++K +YLF QVA+S   CDQR LG LLH++IQ+PRQLGEVA+FGGSN+EP
Sbjct  1675  GIACLCGTEVKEKLQYLFSQVANSGSQCDQRHLGALLHEAIQVPRQLGEVAAFGGSNVEP  1854

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
             SVRSCF+F+  KP IEA+ FL+W+ LEPQSMVWL VLHRV  AE  KHQ KC+IC++CPI
Sbjct  1855  SVRSCFRFSTGKPVIEASQFLEWVNLEPQSMVWLAVLHRVTIAEQVKHQTKCSICRQCPI  2034

Query  862   IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
              GFRYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TPTTS E++RDFA  LKNKFR
Sbjct  2035  KGFRYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPTTSSENMRDFATTLKNKFR  2214

Query  922   TKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSY  981
             +K+YF+KHP+ GYLPVQ+VLE D  ETPASSP L H DTHSRIEH+ASRLAEME+ N S+
Sbjct  2215  SKQYFSKHPQRGYLPVQSVLESDCSETPASSPMLPHADTHSRIEHFASRLAEMESQNCSF  2394

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPA---QILISLESEERGELERILA  1038
              NDS+SP++SID++  L++H        SP++  R PA   Q   S+ +E +GELE+ILA
Sbjct  2395  FNDSLSPDDSIDEDQYLLRH-------SSPITD-REPAFGQQAPCSMATESKGELEKILA  2550

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSP--LPSPPEMMPTSPQSPRDAELIAEAKLLRQHK  1096
              LE+ENR LQ E  RLK QHE    +P  +    E  P      R+ EL+AEA++LRQHK
Sbjct  2551  HLEDENRILQGELRRLKWQHEEAAEAPTLVEGSAEATPDH----RNEELLAEARILRQHK  2718

Query  1097  GRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLL  1156
              RLE RMQILEDHNKQLESQL RLR+LL QP +E+  NG+  SS ++S ++S+ S P   
Sbjct  2719  SRLETRMQILEDHNKQLESQLQRLRELLLQPPSESDGNGSAGSSLASSPRQSEGSHP---  2889

Query  1157  RVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
             R  G  T D+   +D+ S  QD S  LE++ME+L ++FPS R  +V
Sbjct  2890  REKGQTTPDTEVADDVGSKSQDVSLCLEDIMEKLRHAFPSVRSSDV  3027


 Score = 50.8 bits (120),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 27/232 (11%)
 Frame = +1

Query  21    ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
             E+ DWLS  D+ + +Q  + GD+  + +      A M++++ + P +  ++ +AQ   ++
Sbjct  517   EIIDWLSQKDEELSAQLPLQGDVALVQQEKETHAAFMEEVKSKGPYISSVLESAQAFLSQ  696

Query  81    TSNQEARTII-----TDRIERIQN--------------QWDEVQEHLQNRRQQLNEMLKD  121
                +E          T   +RIQN               W+++     ++ + +   L+ 
Sbjct  697   HPFEELEESQSESKDTSPRQRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIEHTLEH  876

Query  122   STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
               +   A EE    L QA     +W+  G   +D++ + I   K   ++    +  V + 
Sbjct  877   LLEIQGAMEELSSTLTQAEGVRATWEPIGDLFIDSLPEHIQAIKLFKEEFSPVKDGVKLV  1056

Query  181   NDLALKL-LRDY--SADDTRKVHMITENINASWRSIHKRVSEREAALEETHR  229
             NDLA +L + D   S +++R +    E IN  W+ +   V+ER   L++ HR
Sbjct  1057  NDLAHQLAISDVHLSMENSRAL----EQINIRWKQLQVSVAERLKQLQDAHR  1200


>tpg|BK005803.1| TPA_inf: Ornithorhynchus anatinus dystrophin-related protein 
2 (DRP2) mRNA, complete cds
Length=2950

 Score =  981 bits (2535),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 493/880 (56%), Positives = 640/880 (72%), Gaps = 15/880 (1%)
 Frame = +1

Query  321   NMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPA  380
             +MN  WSE++KKS ++R+ LEA SDQ  +L   LQE++ WL  KD+ELS Q P+ GD   
Sbjct  262   DMNLCWSEIKKKSHSLRARLEAFSDQSGKLQAPLQEIVDWLGHKDEELSAQLPLRGDVAL  441

Query  381   VQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNV  440
             VQ++ + H AF  E+K + P I S LE+ + FL + P E LE+   E R++ P  R QN 
Sbjct  442   VQQEKETHAAFMEEVKARGPYIYSVLESAQTFLAQHPFEELEEPQTEGRDVSPRLRGQNG  621

Query  441   TRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSW  500
             +RL+ KQA   +  WEKL     D  R I+ TLE+L +++ A +ELD  L QAE ++ +W
Sbjct  622   SRLVWKQATVASELWEKLTARCVDQHRHIERTLEQLLDVRRAMEELDASLGQAEGVRATW  801

Query  501   QPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDL  560
             +P+GDL IDSL DH++  K  + E++P+K+ V  VND A QL    + LS  N   LE +
Sbjct  802   EPIGDLFIDSLPDHIQTTKLFKEELSPMKDGVKLVNDRAHQLAISDVHLSMENSRALEQI  981

Query  561   NTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQT  620
             NTRWK LQ +V +R++QL +AHRDFGP SQHFL+TSVQ PWERAISPNKVPYYINH+ QT
Sbjct  982   NTRWKQLQTSVSERLKQLQDAHRDFGPGSQHFLATSVQVPWERAISPNKVPYYINHQAQT  1161

Query  621   TCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQ  680
             TCWDHPKMTELYQ+LA+LNN++FSAYRTAMKLRR+QKAL LDL+ LS A +  ++H L+ 
Sbjct  1162  TCWDHPKMTELYQTLAELNNIKFSAYRTAMKLRRVQKALRLDLVPLSTALEIFNEHELQP  1341

Query  681   NDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFK  740
              +  MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LNWLLNVYD+GR+G++R LSFK
Sbjct  1342  GEHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMTLNWLLNVYDSGRSGKMRALSFK  1521

Query  741   TGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIE  800
             TGI  LC   +++K++YLF QVA   G CDQR LG+LLH++IQ+PRQLGEVA+FGGSN+E
Sbjct  1522  TGIACLCGTDVKEKFQYLFSQVAHPGGLCDQRHLGILLHEAIQVPRQLGEVAAFGGSNVE  1701

Query  801   PSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECP  860
             PS+RSCF+F+  KP +E A FL+W  LEPQSMVWL VLHRVA AE  KHQ KC++C+ CP
Sbjct  1702  PSIRSCFRFSTGKPVVEVAQFLEWANLEPQSMVWLAVLHRVALAEPVKHQTKCSVCRHCP  1881

Query  861   IIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKF  920
             I GFRYRSLK FN DICQ CF +GR +KG+K+HYP++EY TPTTS E++RDFA  LKNKF
Sbjct  1882  IKGFRYRSLKQFNVDICQMCFLTGRASKGNKLHYPIMEYYTPTTSSENMRDFATTLKNKF  2061

Query  921   RTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGS  980
             R+K YF++HP+ GYLPVQ+VLE D  ETPASSP L H DTHSRIEH+ASRLAEME+ N S
Sbjct  2062  RSKHYFSRHPQRGYLPVQSVLEADFSETPASSPVLPHADTHSRIEHFASRLAEMESQNCS  2241

Query  981   YLNDSISPNESIDDEHLLIQHYCQSLNQDSPLS--QPRSPAQILISLESEE-RGELERIL  1037
             + NDS SP++SID++  L++H        SP++  +P    Q   S   EE +G LE+IL
Sbjct  2242  FFNDSQSPDDSIDEDQYLLRH-------SSPITDREPAGGQQAQGSPPGEEDKGTLEKIL  2400

Query  1038  ADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKG  1097
             A LE+ENR LQ E  RLK QHE  G +P  +     P + Q P + EL+AEA++LRQHK 
Sbjct  2401  AHLEDENRILQGELRRLKWQHEEAGEAPPLA--AGTPEAAQDPHNEELLAEARILRQHKS  2574

Query  1098  RLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLR  1157
             RLE RMQILEDHNKQLESQL RLR+LL QP A+    G+  SS ++S Q S+ S     R
Sbjct  2575  RLETRMQILEDHNKQLESQLQRLRELLLQPPADLDGTGSAGSSLASSPQPSEGSH---AR  2745

Query  1158  VVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSS  1197
                  T D+   +++++  QD S  LE++ME+L N+FP++
Sbjct  2746  EREHNTPDTEVADEIVAKSQDVSLCLEDIMEKLRNAFPNA  2865


 Score = 57.4 bits (137),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 101/249 (40%), Gaps = 36/249 (14%)
 Frame = +1

Query  21    ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRP---------------  65
             E+ DWL   D+ + +Q  + GD+  + +      A M++++ R P               
Sbjct  367   EIVDWLGHKDEELSAQLPLRGDVALVQQEKETHAAFMEEVKARGPYIYSVLESAQTFLAQ  546

Query  66    ----QLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKD  121
                 +LEE  T  +++  +   Q    ++  +       W+++     ++ + +   L+ 
Sbjct  547   HPFEELEEPQTEGRDVSPRLRGQNGSRLVWKQATVASELWEKLTARCVDQHRHIERTLEQ  726

Query  122   STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
                   A EE +  LGQA     +W+  G   +D++   I  TK   ++L   +  V + 
Sbjct  727   LLDVRRAMEELDASLGQAEGVRATWEPIGDLFIDSLPDHIQTTKLFKEELSPMKDGVKLV  906

Query  181   NDLALKLLRDYSADDTRKVHMITEN------INASWRSIHKRVSEREAALEETHRLLQQF  234
             ND A +L           VH+  EN      IN  W+ +   VSER   L++ HR    F
Sbjct  907   NDRAHQLA-------ISDVHLSMENSRALEQINTRWKQLQTSVSERLKQLQDAHR---DF  1056

Query  235   PLDLEKFLA  243
                 + FLA
Sbjct  1057  GPGSQHFLA  1083


>emb|AJ223356.1| Strongylocentrotus purpuratus mRNA for SuDp98 protein
Length=3650

 Score =  973 bits (2514),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 504/1001 (50%), Positives = 681/1001 (68%), Gaps = 63/1001 (6%)
 Frame = +1

Query  280   DLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSH  339
             DLQ EIEAH  +  +L+++  K ++  +  D++  LQ++LD +N +W+ +  +S  IR  
Sbjct  601   DLQAEIEAHHSILSSLNQSGVKAVQDADSPDESHTLQKKLDTVNHRWTNIHDRSAEIRKR  780

Query  340   LEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKE  399
             LEA++++W  L  + +EL+ W++LK+D+L ++ P+GGD+ ++Q+Q   H+ ++++L+ K+
Sbjct  781   LEANAEEWNNLVRATEELVRWIRLKEDDLIKRQPVGGDYNSIQQQISDHKVYRQQLEEKQ  960

Query  400   PVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLN  459
               +   L+   ++L EQ    L+ L  E     PE  A N+   L+    ++   W KLN
Sbjct  961   SAVERNLQMGSLYLAEQ--RDLD-LLSEKELTGPEAEAHNIVHKLKDSVTDLQDSWNKLN  1131

Query  460   LHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVK  519
             + S +WQ K+DE   ++  L +A D+L  +L +AE  +  W PVGDL+IDSL  HL +++
Sbjct  1132  IKSENWQHKLDEMSTKMLALHQAMDKLSSRLHEAEATRSRWLPVGDLIIDSLPQHLAELR  1311

Query  520   ALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLH  579
             + +   +P+ +++  V  +A       + LS  N   LED+  RWK LQ+A+++R R L+
Sbjct  1312  SFQDYYSPIHDDLEKVTQMAGHFPAQQVSLSTVNQGRLEDIVRRWKTLQLAIDERARLLN  1491

Query  580   EAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLN  639
             EA RDFGP SQHFL  SVQ PWERA++ NKVPY+INH T+TT WDHP+MTEL+ SL DLN
Sbjct  1492  EALRDFGPQSQHFLRASVQHPWERAVAANKVPYFINHGTETTHWDHPRMTELFHSLFDLN  1671

Query  640   NVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNL-KQNDQPMDILQIINCLTTIY  698
              V+FSAYRT MKLRRLQK+LCL LL+L++A     QH L   ND+ +D+ +II CL T+Y
Sbjct  1672  AVKFSAYRTGMKLRRLQKSLCLYLLNLASAESIFTQHELVSGNDRTLDVTEIITCLATVY  1851

Query  699   DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYL  758
             + L  +H  +VNVP CVDMCLNWLLNVYDT R+GRIRVL+FK GI+ LC AHLEDKYR++
Sbjct  1852  ENLAMDHPGMVNVPQCVDMCLNWLLNVYDTVRSGRIRVLAFKVGIVMLCNAHLEDKYRFI  2031

Query  759   FKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEA  818
              + VA   G  DQR LGLLLHD +QIPRQLGEVASFGGSNIEPSVRSCF    +KP IE 
Sbjct  2032  CRFVADKNGMIDQRGLGLLLHDCVQIPRQLGEVASFGGSNIEPSVRSCFNMTGSKPLIEP  2211

Query  819   ALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQ  878
             A FL WM+LEPQSMVW+PVLHRVAA+ETAKHQAKCNICKECPI+G RYR LK FN+D+CQ
Sbjct  2212  AQFLAWMKLEPQSMVWMPVLHRVAASETAKHQAKCNICKECPIVGLRYRCLKCFNFDLCQ  2391

Query  879   SCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQ  938
             SCFFSGR AK HK+ +PM EYCT TTSGEDVRDFAKV++NKF++KRY+ KHPR+GYLPVQ
Sbjct  2392  SCFFSGRKAKTHKLSHPMQEYCTTTTSGEDVRDFAKVVRNKFKSKRYYRKHPRVGYLPVQ  2571

Query  939   TVLEGDNMETPASSPQ-LSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHL  997
             +VLEGD++E+P ++PQ +++ DTH+R+E YA+RLAE+E S G+ LN   S    ++DEH 
Sbjct  2572  SVLEGDDLESPITTPQHMANQDTHTRLELYANRLAEVE-SQGT-LN---SVPTDLEDEHQ  2736

Query  998   LIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLK--  1055
             LI HYC SL  D   + P SPAQI++S+++E R +LE  + +LE+ENR L +E + LK  
Sbjct  2737  LIAHYCHSLGGDVS-TVPNSPAQIVVSIDAEHRPDLESQINELEDENRTLLSELETLKTL  2913

Query  1056  QQHEHKGLSPLPSPPEMMPTSPQSP-RDAELIAEAKLLRQHKGRLEARMQILEDHNKQLE  1114
             +  + K  + L +      TS +SP RDAEL+AEAKLLRQHKGRLEARMQILEDHN+QLE
Sbjct  2914  RSEDVKRAAELAASSGDERTSGRSPGRDAELVAEAKLLRQHKGRLEARMQILEDHNRQLE  3093

Query  1115  SQLHRLRQLLEQPQ-AEAKVNGTTVSSPSTSLQRSDSSQPMLLRV-------------VG  1160
             +QL RLRQLLEQPQ   A    ++ ++P+ S   S SS     R+               
Sbjct  3094  AQLQRLRQLLEQPQDKSASQVSSSKTTPAVSPTSSISSASKAKRIQHPIAIETRTNGGTS  3273

Query  1161  SQTSDSMGEEDLLSPPQDT----------------------------STGLEEVMEQLNN  1192
                SD  GEE    P   T                               L++V+++LNN
Sbjct  3274  DYDSDMAGEEYNNHPSPHTPPHLKDDHHHHHHLHQGGGAANGVQAKGKVDLDKVIQELNN  3453

Query  1193  SFP-----SSRGHN-VGSLFHMADDLGRAMESLVSVMTDEE  1227
              FP      + G N VGSL HMAD++G+A+++LV+VM+DEE
Sbjct  3454  -FPDGAKNGNVGQNSVGSLLHMADNIGKAVDTLVTVMSDEE  3573


>ref|XR_023213.1| PREDICTED: Pan troglodytes similar to dystrophin related protein 
2 (DRP2), mRNA
Length=4697

 Score =  953 bits (2463),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 482/884 (54%), Positives = 637/884 (72%), Gaps = 16/884 (1%)
 Frame = +1

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E++KKS N+R      S     L  SL+ +   +      +    P+  D    
Sbjct  274   MNLCWNEIKKKSHNLRFQPTYFSPN*G*LCKSLKSIFFSVDRLSLAVCACLPLQTDNMLS  453

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             +K+ D  RAF  E+K++ P I S LE+ + FL++ P E LE+ + E ++  P++R QN++
Sbjct  454   EKKPDTKRAFMEEVKSRGPYIYSVLESAQAFLSQHPFEELEEPHSESKDTSPKQRIQNLS  633

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R I+ TLE+L E+Q A +EL   L QAE ++ +W+
Sbjct  634   RFVWKQATVASELWEKLTARCVDQHRHIERTLEQLLEIQGAMEELSTTLSQAEGVRATWE  813

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             P+GDL IDSL +H++ +K  + E +P+K+ V  VNDLA QL    + LS  N   LE +N
Sbjct  814   PIGDLFIDSLPEHIQAIKLFKEEFSPMKDGVKLVNDLAHQLAISDVHLSMENSQALEQIN  993

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
              RWK LQ +V +R++QL +AHRDFGP SQHFLS+SVQ PWERAISPNKVPYYINH+ QTT
Sbjct  994   VRWKQLQASVSERLKQLQDAHRDFGPGSQHFLSSSVQVPWERAISPNKVPYYINHQAQTT  1173

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQ+LADLNN++FSAYRTAMKLRR+QKAL LDL++L+ A +  ++H+L+ +
Sbjct  1174  CWDHPKMTELYQTLADLNNIKFSAYRTAMKLRRVQKALRLDLVTLTTALEIFNEHDLQAS  1353

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             +  MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LNWLLNV+D+GR+G++R LSFKT
Sbjct  1354  EHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLNWLLNVFDSGRSGKMRALSFKT  1533

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
             GI  LC   +++K +YLF QVA+S   CDQR LG+LLH++IQ+PRQLGEVA+FGGSN+EP
Sbjct  1534  GIACLCGTEVKEKLQYLFSQVANSGSQCDQRHLGVLLHEAIQVPRQLGEVAAFGGSNVEP  1713

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
             SVRSCF+F+  KP IEA+ FL+W+ LEPQSMVWL VLHRV  AE  KHQ KC+IC++CPI
Sbjct  1714  SVRSCFRFSTGKPVIEASQFLEWVNLEPQSMVWLAVLHRVTIAEQVKHQTKCSICRQCPI  1893

Query  862   IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
              GFRYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TPTTS E++RDFA  LKNKFR
Sbjct  1894  KGFRYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPTTSSENMRDFATTLKNKFR  2073

Query  922   TKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSY  981
             +K YF+KHP+ GYLPVQ+VLE D  ETPASSP   H DTHSRIEH+ASRLAEME+ N S+
Sbjct  2074  SKHYFSKHPQRGYLPVQSVLEADYSETPASSPMWPHADTHSRIEHFASRLAEMESQNCSF  2253

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPA---QILISLESEERGELERILA  1038
              NDS+SP++SID++  L++H        SP++  R PA   Q   S+ +E +GEL++ILA
Sbjct  2254  FNDSLSPDDSIDEDQYLLRH-------SSPITD-REPAFGQQAPCSVATESKGELQKILA  2409

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGR  1098
              LE+ENR LQ E  RLK QHE    +  PS  +    +    R+ EL+AEA++LRQHK R
Sbjct  2410  HLEDENRILQGELRRLKWQHEEAAEA--PSLADGSTEAAPDHRNEELLAEARILRQHKSR  2583

Query  1099  LEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRV  1158
             LE RMQILEDHNKQLESQL RLR+LL QP  E+  +G+  SS ++S Q+S+ S P   R 
Sbjct  2584  LETRMQILEDHNKQLESQLQRLRELLLQPPTESDGSGSAGSSLASSPQQSEGSHP---RE  2754

Query  1159  VGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
              G  T D+   +D+ S  QD S  LE++ME+L ++FPS R  +V
Sbjct  2755  KGQTTPDTEAADDVGSKSQDVSLCLEDIMEKLRHAFPSVRSSDV  2886


 Score = 44.7 bits (104),  Expect = 0.36, Method: Compositional matrix adjust.
 Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 33/203 (16%)
 Frame = +1

Query  53    QKATMQDLEQRRPQLEELITAAQNLKNKTSNQE-----ARTIITDRIERIQNQ-------  100
             ++A M++++ R P +  ++ +AQ   ++   +E     + +  T   +RIQN        
Sbjct  472   KRAFMEEVKSRGPYIYSVLESAQAFLSQHPFEELEEPHSESKDTSPKQRIQNLSRFVWKQ  651

Query  101   -------WDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKE-GPYT  152
                    W+++     ++ + +   L+   +   A EE    L QA     +W+  G   
Sbjct  652   ATVASELWEKLTARCVDQHRHIERTLEQLLEIQGAMEELSTTLSQAEGVRATWEPIGDLF  831

Query  153   VDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITEN------I  206
             +D++ + I   K   ++    +  V + NDLA +L           VH+  EN      I
Sbjct  832   IDSLPEHIQAIKLFKEEFSPMKDGVKLVNDLAHQLA-------ISDVHLSMENSQALEQI  990

Query  207   NASWRSIHKRVSEREAALEETHR  229
             N  W+ +   VSER   L++ HR
Sbjct  991   NVRWKQLQASVSERLKQLQDAHR  1059


>gb|BC136034.1| Xenopus tropicalis dystrophin related protein 2, mRNA (cDNA clone 
MGC:122572 IMAGE:7656069), complete cds
Length=4546

 Score =  929 bits (2402),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 470/885 (53%), Positives = 624/885 (70%), Gaps = 16/885 (1%)
 Frame = +2

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E++KKS ++R+ LEA SD   +LH  LQE++ WL  KD+ELS Q P+ GD  +V
Sbjct  197   MNLCWNEIKKKSQSLRARLEAFSDPTLKLHPPLQEIIDWLGQKDEELSAQLPLRGDLSSV  376

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q+  D H  F  E+K++ P I S LE+ + FLT+ P    E+   + ++  P  +A+ ++
Sbjct  377   QQAKDKHVTFMEEVKSRGPYIYSVLESAQTFLTQHPFSDEEEDATQGKDSSPRSKAETLS  556

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             RLL KQA   +  W++L   S D  R ++ TLE++QEL  +  E    + Q E ++ SW+
Sbjct  557   RLLWKQASVASELWDRLTARSLDQHRHLERTLEQIQELGISMKEAGDSIGQGESVQASWE  736

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             P+GDL IDSL DH++  K  + E++P+K+ V   NDLA QL    + LS  N   LE++N
Sbjct  737   PIGDLFIDSLPDHIQTTKLFKEELSPIKDMVKLANDLAHQLALCDVHLSMENARELENIN  916

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
             +RWK LQ +V +R+RQL +AHRDFGP SQHFLS+SVQ PWERAISPNKVPYYINH+ QTT
Sbjct  917   SRWKQLQTSVGERLRQLQDAHRDFGPESQHFLSSSVQVPWERAISPNKVPYYINHQAQTT  1096

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQ+L DLNN++FSAYRTAMKLRR+QKAL LDL++L           L+  
Sbjct  1097  CWDHPKMTELYQALGDLNNIKFSAYRTAMKLRRVQKALRLDLVTLPLLTQIFTCDTLQSP  1276

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             ++ +D+L +I CL+++Y+RLE+E   LVNVPLCVD+ LNWLLNV+D  R GRIRVLSFK 
Sbjct  1277  ERNLDVLDVIRCLSSLYERLEEERGLLVNVPLCVDLTLNWLLNVFDGARNGRIRVLSFKA  1456

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
             GI+SLC   ++ K +YLF QVAS    CDQR+LGLLLH++IQIPRQLGEVA+FGGSN+EP
Sbjct  1457  GIVSLCDCDVKGKLQYLFSQVASPGNTCDQRQLGLLLHEAIQIPRQLGEVAAFGGSNVEP  1636

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
             SVRSCF+F N    +E A FL+W  LEPQSMVWLPVLHRV  AET KHQAKC++CK+CP+
Sbjct  1637  SVRSCFRFGNGTAHLELAQFLEWGCLEPQSMVWLPVLHRVTLAETVKHQAKCSVCKQCPM  1816

Query  862   IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
              GFRYRSLK F  DICQSCF +G+  K +K+HYP++EY TPTTSGE +RDFA  LKNKFR
Sbjct  1817  KGFRYRSLKQFGVDICQSCFLTGQAGKVNKLHYPIMEYYTPTTSGEKMRDFATTLKNKFR  1996

Query  922   TKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSY  981
             T++YF++HP+ GYLPVQ+VLE +  +TPASSP L H DTHSRIEH+ASRLAEME+ N S+
Sbjct  1997  TRQYFSRHPQRGYLPVQSVLEAEVADTPASSPMLPHADTHSRIEHFASRLAEMESQNCSF  2176

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLE  1041
               DS+SP++S+D++  L++H     ++D P + P+ P  +      EE+GELE+ILA LE
Sbjct  2177  FTDSLSPDDSLDEDQYLLRHSSPITDRD-PSNTPQIPGNL---NPEEEQGELEKILAHLE  2344

Query  1042  EENRNLQAEYDRLKQQHEHKG-LSPLPS-PPEMMPTSPQSPRDAELIAEAKLLRQHKGRL  1099
              ENR LQ E  RLK QH   G +S L    P++        +  EL++EA++LR HK RL
Sbjct  2345  HENRILQGELKRLKWQHAEAGEVSALGEVSPDVGGNGVGEAQSEELLSEARILRHHKNRL  2524

Query  1100  EARMQILEDHNKQLESQLHRLRQLLEQPQA-EAKVNGTTVSSPSTSLQRSDSSQPMLLRV  1158
             E RMQILEDHNKQLESQL RLR+LL QP   E K + ++ S  S S   ++ +       
Sbjct  2525  ETRMQILEDHNKQLESQLRRLRELLLQPNTDEGKPSSSSSSPDSQSKCPAEGN-------  2683

Query  1159  VGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVG  1203
               + T D+   +D+ S  ++    LE++ME+L N+FP++   ++ 
Sbjct  2684  --AGTPDTEAADDVESRTREVGLCLEDIMEKLRNAFPNTTDSDIA  2812


 Score = 61.2 bits (147),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 27/232 (11%)
 Frame = +2

Query  21   ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNL---  77
            E+ DWL   D+ + +Q  + GDL  + +   K    M++++ R P +  ++ +AQ     
Sbjct  299  EIIDWLGQKDEELSAQLPLRGDLSSVQQAKDKHVTFMEEVKSRGPYIYSVLESAQTFLTQ  478

Query  78   -------------KNKTSNQEART---IITDRIERIQNQWDEVQEHLQNRRQQLNEMLKD  121
                         K+ +   +A T   ++  +       WD +     ++ + L   L+ 
Sbjct  479  HPFSDEEEDATQGKDSSPRSKAETLSRLLWKQASVASELWDRLTARSLDQHRHLERTLEQ  658

Query  122  STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              +   + +EA   +GQ  +   SW+  G   +D++   I  TK   ++L   +  V +A
Sbjct  659  IQELGISMKEAGDSIGQGESVQASWEPIGDLFIDSLPDHIQTTKLFKEELSPIKDMVKLA  838

Query  181  NDLALKL-LRDY--SADDTRKVHMITENINASWRSIHKRVSEREAALEETHR  229
            NDLA +L L D   S ++ R++    ENIN+ W+ +   V ER   L++ HR
Sbjct  839  NDLAHQLALCDVHLSMENAREL----ENINSRWKQLQTSVGERLRQLQDAHR  982


>ref|XM_001342272.2| PREDICTED: Danio rerio similar to dystrophin related protein 
2 (LOC100002550), mRNA
Length=2496

 Score =  929 bits (2401),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 458/810 (56%), Positives = 592/810 (73%), Gaps = 13/810 (1%)
 Frame = +1

Query  390   AFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAE  449
             AF  ++K++ P I S LE+ + FL + P +  E+   + +E+ P  R  NV+R + KQA 
Sbjct  25    AFMEDVKSRGPYIYSVLESAQTFLAQHPFQEPEETLPDGKEVSPRRRMLNVSRSVWKQAN  204

Query  450   EVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLID  509
               +  WEKL     D  R ++ TLERL ++Q A +EL   L QAE ++ +W+PVGDL ID
Sbjct  205   VASDLWEKLTARCVDRHRHMERTLERLLQIQAAMEELAAALEQAEGVRDAWEPVGDLFID  384

Query  510   SLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQV  569
             SLQDH++  K  + E++ +KE + H+NDLA +L    + LS  N   LE LN RWKLLQ 
Sbjct  385   SLQDHIDATKLFKEELSQVKEGMKHINDLAHELAISDVHLSMDNARALEHLNNRWKLLQG  564

Query  570   AVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMT  629
             ++E+R++QL +AHRDFGP SQHFLS+SVQ PWERAISPNKVPYYINH+ QTTCWDHPKMT
Sbjct  565   SIEERLKQLQDAHRDFGPGSQHFLSSSVQIPWERAISPNKVPYYINHQAQTTCWDHPKMT  744

Query  630   ELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQ  689
             ELYQ+LADLNN++FSAYRTAMKLR +QKAL LDL  LS+  D   +  L+  +  MD+++
Sbjct  745   ELYQALADLNNIKFSAYRTAMKLRHVQKALRLDLFKLSSVVDVFREQELQHGEHVMDVVE  924

Query  690   IINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKA  749
             +I+ LT++Y+RLE+E + L+N+PLCVDMCLNWLLNVYD+GR G++RVLSFK G++ LC A
Sbjct  925   VIHALTSLYERLEEERSVLINIPLCVDMCLNWLLNVYDSGRNGKMRVLSFKMGLVILCNA  1104

Query  750   HLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQF  809
              +++KY+YLF+QV    G  DQ+ L LLLH++IQ+PRQLGEVA+FGGSN+EPSVRSCF+ 
Sbjct  1105  DIQEKYKYLFRQVCGPGGLTDQKHLSLLLHEAIQVPRQLGEVAAFGGSNVEPSVRSCFRM  1284

Query  810   ANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  869
              + K  IE + FL+WM LEPQS+VWLPVLHRV  AETAKHQA+C ICK+CPI GFRYRSL
Sbjct  1285  VSGKSAIELSHFLEWMSLEPQSVVWLPVLHRVTVAETAKHQARCYICKQCPIKGFRYRSL  1464

Query  870   KHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKH  929
             K FN DICQ+CF +GR  KG K+HYP++EY TPTTSGE +RDFAK LKNKFR+K+YF+KH
Sbjct  1465  KQFNVDICQTCFLTGRTTKGKKLHYPIMEYYTPTTSGEKMRDFAKTLKNKFRSKQYFSKH  1644

Query  930   PRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPN  989
             P+ GYLPVQ+VLE ++ ETP SSP+L H DTHSRIEH+ASRLAEMEN N S+  DS+SP+
Sbjct  1645  PQRGYLPVQSVLEVESSETPCSSPRLPHADTHSRIEHFASRLAEMENQNCSFFTDSLSPD  1824

Query  990   ESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQA  1049
             ES+D++  L++H   SL QDSP         +L  L+ ++R EL+R L  LE ENR LQ 
Sbjct  1825  ESLDEDQYLLRHSSPSLEQDSP------HGLMLAQLDCQDREELQRTLHRLENENRVLQG  1986

Query  1050  EYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDH  1109
             EY RLK +HE    S  P   E  P SP   +D EL+AEA++LRQHK RLE RMQILEDH
Sbjct  1987  EYRRLKWKHEEAAAS--PQLLESGPGSPPGQQDEELLAEARVLRQHKTRLETRMQILEDH  2160

Query  1110  NKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGE  1169
             NKQLESQL RLR+LL QP+ +++ NG+  SS S+ +      +P        +T+D+   
Sbjct  2161  NKQLESQLRRLRELLLQPKDDSEANGSAPSSLSSPVSGGHQGEP-----PSRETTDTEAA  2325

Query  1170  EDLLSPPQDTSTGLEEVMEQLNNSFPSSRG  1199
              + L   QDT   L++V+EQL N FPS  G
Sbjct  2326  GEDLDHEQDTVLQLQQVIEQLRNVFPSEPG  2415


>ref|XM_001863085.1| Culex quinquefasciatus dystrophin major muscle, mRNA
Length=10440

 Score =  912 bits (2358),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 530/1295 (40%), Positives = 778/1295 (60%), Gaps = 126/1295 (9%)
 Frame = +1

Query  17     RAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQN  76
              ++ +++ +WL L  +++    V+ GD + +   I K K T++ LE ++ Q++E++T   N
Sbjct  6637   QSMSQIANWLQLEHELLNKHCVVFGDTDMMLSAIEKGKNTIKQLENKKAQIDEIVTVVDN  6816

Query  77     LKNKTSNQ--EARTII----------------TDRI------ERIQNQWDEVQEHLQNRR  112
              LK+ T+ Q  E +                   T++I       R+++QW++  + +  R+
Sbjct  6817   LKSDTNYQYLENKDFYLMFYSFCCSPSQHVSKTNQIYHFLVATRMRDQWEDTSQSVLERK  6996

Query  113    QQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQ  172
               QL  ML DS ++   + + E  L +  ++ E       T D ++ +  E K    +L Q
Sbjct  6997   SQLTAMLGDSQRYEAKRIDIESWLNRMESRSERMGVVATTADVLEIQQKEQKSFHAELHQ  7176

Query  173    WQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQ  232
              ++ ++++ N L  KL+  Y +DDT ++  +TE++N  + +++  V  R  +L      LQ
Sbjct  7177   YKHHIELFNQLTQKLIAVYPSDDTSRIKRMTESVNLRYNNLNNAVISRGKSLHAAVHSLQ  7356

Query  233    QFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKG-VKELMKQWQDLQGEIEAHTDV  291
               F   L++FL WL+EAE+             L E+++  +      ++DLQ EIE+H  +
Sbjct  7357   SFDKSLDQFLGWLSEAES-------------LCENTESEIDRNPHSFKDLQSEIESHRII  7497

Query  292    YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
              Y  LD   +K+L SL   +DAV+LQRRLD MN +W+ L+ KS+ IR+ LE++S+ W  L 
Sbjct  7498   YERLDSTGKKLLGSLTSQEDAVMLQRRLDEMNQRWNHLKFKSVAIRNRLESNSEHWNALL  7677

Query  352    LSLQELLVWLQLKDDELSRQA--PIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETV  409
              LSL+EL  W+  KD EL+     P+ GD  ++QKQ D HRAF+R+L+ K PV+ + L T 
Sbjct  7678   LSLRELTEWVIRKDTELTSLGLGPMKGDAASLQKQTDDHRAFRRQLEDKRPVVENNLLTG  7857

Query  410    RIFLTEQP----LEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADW  465
              R ++ ++P        E +  E R L  EE+ + +TR +R++  +++ +W  L   S +W
Sbjct  7858   RQYIAKEPPLSDTSDSEAIDSESRYLSAEEQNKELTRSIRREVSKLSEQWNHLIDRSDNW  8037

Query  466    QRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ-PVGDLLIDSLQDHLEKVKALRGE  524
              + +++E + ++++ Q+  D+L  ++  AE +  SW  PV          HL+++K     
Sbjct  8038   KHRLEEYMTKMRQFQKVLDDLSSRVASAETLTQSWTTPVTTADSAEQMQHLQRLKDKMTT  8217

Query  525    IAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDR--------VR  576
                 L ++    N+     T   + +    L+ LEDLNTR KLL +A+++R          
Sbjct  8218   AGALLDDC---NEQQGFFTANHVLVPNQCLAKLEDLNTRMKLLHIAMDERHKILIANGAN  8388

Query  577    QLHEAHRDFGPASQHFLST-----------SVQGPWERAISPNKVPYYINHETQTTCWDH  625
              Q   A  D G  S H +ST           SV+ PWERAI+P  VPYYINHE + T WDH
Sbjct  8389   QSSTADPD-GNKSTHGISTGTIGPIPNLATSVKPPWERAITPANVPYYINHERENTHWDH  8565

Query  626    PKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK-QNDQP  684
              P+M EL +SLADLN+VRFSAYRTA+KLR +QK L  D L+++ A ++ D+H L+ QND+ 
Sbjct  8566   PEMIELMKSLADLNDVRFSAYRTALKLRTVQKRLAFDRLTMNVAIESFDRHGLRAQNDKL  8745

Query  685    MDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGII  744
              +DI  +   L ++Y  +E      +++PL +D+ +NW+LNVYD+ RTG+IRVLSFK G+I
Sbjct  8746   IDIPDMTTVLHSLYVTIEP-----IDMPLMLDLAINWILNVYDSQRTGQIRVLSFKVGLI  8910

Query  745    SLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVR  804
               LCK HLE+KYRYLF+ +A      DQR+LGLLLHD IQ+PRQLGEVA+FGGSNIEPSVR
Sbjct  8911   LLCKGHLEEKYRYLFRLIADLEKKVDQRKLGLLLHDCIQVPRQLGEVAAFGGSNIEPSVR  9090

Query  805    SCFQFA----NNKP---EIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICK  857
              SCF+ A    N +P    IEA  FL+W++ EPQS+VWLPVLHR+ AAE AKHQAKCNICK
Sbjct  9091   SCFERAGVNQNGEPLETAIEAQHFLNWLQHEPQSLVWLPVLHRLVAAEAAKHQAKCNICK  9270

Query  858    ECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLK  917
              E PI+GFRYR LK FN+D+CQ CFF GR AK HK+ +PM EYCT TTS EDVRDF + L+
Sbjct  9271   EYPIVGFRYRCLKCFNFDMCQKCFFLGRNAKNHKLSHPMHEYCTTTTSTEDVRDFTRALR  9450

Query  918    NKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLS----HDDTHSRIEHYASRLAE  973
              NKF++++YF KHPR+GYLPVQ+VLEGD +E+PA SPQ       +D HSR+E YASRLA+
Sbjct  9451   NKFKSRKYFKKHPRVGYLPVQSVLEGDALESPAPSPQHGAHTLQNDMHSRLEMYASRLAQ  9630

Query  974    MENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGEL  1033
              +E    S    S +P+   DDEH LI  YCQSL  +     P+SP Q++ ++++E+R EL
Sbjct  9631   VEYGTRS----SSTPDS--DDEHQLIAQYCQSLPNNGG---PKSPIQVMAAMDAEQREEL  9783

Query  1034   ERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLR  1093
              E ++ DLE+EN +LQAEY+RLK +      + + +P E       +    +++AEAKLLR
Sbjct  9784   EAMIKDLEDENSSLQAEYERLKSKQ-----TSITTPDE---NQAGANGGNDMVAEAKLLR  9939

Query  1094   QHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQP  1153
              QHKGRLEARMQILEDHN+QLE+QL RLRQLL++P        +T+ + S +  + ++  P
Sbjct  9940   QHKGRLEARMQILEDHNRQLEAQLQRLRQLLDEPN---NSKASTLQTRSVTASQLNTESP  10110

Query  1154   MLLRVVGSQTSDSMGEEDLLSPP--------------QDTSTGLEEVMEQLNN---SFPS  1196
              +  +  G     S  E    S                 D       V +  NN   SF S
Sbjct  10111  VKFQQNGHHDQKSSLENGTSSGSFHNNAGISGLSSGGGDNDRSKPGVGKNENNIGVSFAS  10290

Query  1197   SRGHNV----GSLFHMADDLGRAMESLVSVMTDEE  1227
              S          SL HMA DL +A+E LV+V+T++E
Sbjct  10291  SDARPPPPPHTSLLHMAGDLNKAVEELVNVITEQE  10395


>ref|NM_001043259.1| Drosophila melanogaster dystrophin (Dys), transcript variant 
C, mRNA
Length=10554

 Score =  903 bits (2333),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 500/1161 (43%), Positives = 719/1161 (61%), Gaps = 80/1161 (6%)
 Frame = +1

Query  13    ADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELIT  72
               F+++  +++DWL+    +IK Q V+V D + +   I KQ+  +++L+ ++PQL EL+ 
Sbjct  6109  GSFDKSVLQISDWLTWEQNMIKIQSVLVDDGDAVRLAIEKQEKVLRELKMKKPQLNELVH  6288

Query  73    AAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEA  132
              A+ LK     Q+    + +++ R++  WDE  + +  R  QL  ML DS ++   + E 
Sbjct  6289  TAEVLKGDVKRQQ----LQEKVTRLREHWDETSQCVLQRAAQLKNMLSDSQRFEAKRLEL  6456

Query  133   EQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS  192
             E+ L +   + E       T D ++ +  E K    +L Q + + D+ N+L  KL+  Y 
Sbjct  6457  EKWLARMEQRAERMGTIATTADILEAQQKEQKSFHAELHQNKQHFDIFNELTQKLIAVYP  6636

Query  193   ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA  252
              DDT ++  +TE IN  + +++  V  R   L      LQ F   +++FLA+L+E ET  
Sbjct  6637  NDDTTRIKKMTEVINQRYANLNSGVINRGKQLHAAVHSLQSFDRAMDQFLAFLSETETLC  6816

Query  253   NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDA  312
                +    +  L+            ++DLQ EIE H  VY  LD   +K+L SL   +DA
Sbjct  6817  ENAESDIERNPLM------------FKDLQSEIETHRVVYDRLDGTGRKLLGSLTSQEDA  6960

Query  313   VLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQA  372
             V+LQRRLD MN +W+ L+ KS+ IR+ LE++S+ W  L LSL+EL  W+  KD ELS   
Sbjct  6961  VMLQRRLDEMNQRWNNLKSKSIAIRNRLESNSEHWNALLLSLRELTEWVIRKDTELSTLG  7140

Query  373   --PIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPL-----EGLEKLY  425
               P+ GD  ++QKQ D H+AF+R+L+ K P++ S L + R ++  +       +      
Sbjct  7141  LGPVRGDAVSLQKQLDDHKAFRRQLEDKRPIVESNLTSGRQYIANEAAVSDTSDTEANHD  7320

Query  426   QEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDE  485
              + R +  EE+++ +TR +R++  +++ +W  L   S +W+ ++DE + ++++ Q+  ++
Sbjct  7321  SDSRYMSAEEQSRELTRSIRREVGKLSEQWNNLIDRSDNWKHRLDEYMTKMRQFQKILED  7500

Query  486   LDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTL  545
             L  ++  AE  K SW P     +    + +++++ LR ++      +   N+     T  
Sbjct  7501  LSSRVALAEQTKTSWLPPSS--VGEANEQMQQLQRLRDKMTTASALLDDCNEQQSFFTAN  7674

Query  546   GIQLSPYNLSTLEDLNTRWKLLQVAVEDR--------VRQLHEAHRD---------FGPA  588
              + +    LS LEDLNTR KLLQ+A+++R         +Q HE   D          GP 
Sbjct  7675  QVLVPTPCLSKLEDLNTRMKLLQIAMDERQKVLCQAGAQQTHENGDDGRTTSNSGTIGPL  7854

Query  589   SQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRT  648
                 L  SV+ PWERA +   VPYYI+HE +TT WDHP+M EL + LADLN +RFSAYRT
Sbjct  7855  PN--LGQSVKPPWERATTAANVPYYIDHERETTHWDHPEMIELMKGLADLNEIRFSAYRT  8028

Query  649   AMKLRRLQKALCLDLLSLSAACDALDQHNLK-QNDQPMDILQIINCLTTIYDRLEQEHNN  707
             AMKLR +QK L LD +S+S AC++ D+H L+ QND+ +DI  +   L ++Y  +++    
Sbjct  8029  AMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLIDIPDMTTVLHSLYVTIDK----  8196

Query  708   LVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTG  767
              +++ L +D+ +NW+LNVYD+ RTG+IRVLSFK G++ LCK HLE+KYRYLF+ VA +  
Sbjct  8197  -IDLTLMLDLAINWILNVYDSQRTGQIRVLSFKVGLVLLCKGHLEEKYRYLFRLVADTDR  8373

Query  768   FCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA---------NNKPEIEA  818
               DQRRLGLLLHD IQ+PRQLGEVA+FGGSNIEPSVRSC + A         N    IE 
Sbjct  8374  RADQRRLGLLLHDCIQVPRQLGEVAAFGGSNIEPSVRSCLEQAGISQEAIDGNQDISIEL  8553

Query  819   ALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQ  878
               FL W++ EPQS+VWLPVLHR+AAAE AKHQAKCNICKE PI+GFRYR LK FN+D+CQ
Sbjct  8554  QHFLGWLQHEPQSLVWLPVLHRLAAAEAAKHQAKCNICKEYPIVGFRYRCLKCFNFDMCQ  8733

Query  879   SCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQ  938
              CFF GR AK HK+ +PM EYCT TTS EDVRDF + LKNKF++++YF KHPR+GYLPVQ
Sbjct  8734  KCFFFGRNAKNHKLTHPMHEYCTTTTSTEDVRDFTRALKNKFKSRKYFKKHPRVGYLPVQ  8913

Query  939   TVLEGDNMETPASSPQLS----HDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDD  994
             +VLEGD +E+PA SPQ +     +D HSR+E YASRLA++E     Y     +     DD
Sbjct  8914  SVLEGDALESPAPSPQHTTHQLQNDMHSRLEMYASRLAQVE-----YGGTGSNSTPDSDD  9078

Query  995   EHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRL  1054
             EH LI  YCQ+L   S  S P+SP Q++ ++++E+R ELE I+ DLEEEN NLQAEY +L
Sbjct  9079  EHQLIAQYCQALPGTSNGSAPKSPVQVMAAMDAEQREELEAIIRDLEEENANLQAEYQQL  9258

Query  1055  KQQHEHKGLSPLP--------SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQIL  1106
               + +    S +P        S   M   S Q  +  +++AEAKLLRQHKGRLEARMQIL
Sbjct  9259  CSKEQ----SGMPEDSNGMQHSSSSMTGLSGQGEQGQDMMAEAKLLRQHKGRLEARMQIL  9426

Query  1107  EDHNKQLESQLHRLRQLLEQP  1127
             EDHN+QLE+QL RLRQLL++P
Sbjct  9427  EDHNRQLEAQLQRLRQLLDEP  9489


>gb|AF277386.1|AF277386 Drosophila melanogaster dystrophin-like protein DYS (Dys) mRNA, 
complete cds
Length=10181

 Score =  903 bits (2333),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 500/1161 (43%), Positives = 719/1161 (61%), Gaps = 80/1161 (6%)
 Frame = +2

Query  13    ADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELIT  72
               F+++  +++DWL+    +IK Q V+V D + +   I KQ+  +++L+ ++PQL EL+ 
Sbjct  5720  GSFDKSVLQISDWLTWEQNMIKIQSVLVDDGDAVRLAIEKQEKVLRELKMKKPQLNELVH  5899

Query  73    AAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEA  132
              A+ LK     Q+    + +++ R++  WDE  + +  R  QL  ML DS ++   + E 
Sbjct  5900  TAEVLKGDVKRQQ----LQEKVTRLREHWDETSQCVLQRAAQLKNMLSDSQRFEAKRLEL  6067

Query  133   EQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS  192
             E+ L +   + E       T D ++ +  E K    +L Q + + D+ N+L  KL+  Y 
Sbjct  6068  EKWLARMEQRAERMGTIATTADILEAQQKEQKSFHAELHQNKQHFDIFNELTQKLIAVYP  6247

Query  193   ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA  252
              DDT ++  +TE IN  + +++  V  R   L      LQ F   +++FLA+L+E ET  
Sbjct  6248  NDDTTRIKKMTEVINQRYANLNSGVINRGKQLHAAVHSLQSFDRAMDQFLAFLSETETLC  6427

Query  253   NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDA  312
                +    +  L+            ++DLQ EIE H  VY  LD   +K+L SL   +DA
Sbjct  6428  ENAESDIERNPLM------------FKDLQSEIETHRVVYDRLDGTGRKLLGSLTSQEDA  6571

Query  313   VLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQA  372
             V+LQRRLD MN +W+ L+ KS+ IR+ LE++S+ W  L LSL+EL  W+  KD ELS   
Sbjct  6572  VMLQRRLDEMNQRWNNLKSKSIAIRNRLESNSEHWNALLLSLRELTEWVIRKDTELSTLG  6751

Query  373   --PIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPL-----EGLEKLY  425
               P+ GD  ++QKQ D H+AF+R+L+ K P++ S L + R ++  +       +      
Sbjct  6752  LGPVRGDAVSLQKQLDDHKAFRRQLEDKRPIVESNLTSGRQYIANEAAVSDTSDTEANHD  6931

Query  426   QEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDE  485
              + R +  EE+++ +TR +R++  +++ +W  L   S +W+ ++DE + ++++ Q+  ++
Sbjct  6932  SDSRYMSAEEQSRELTRSIRREVGKLSEQWNNLIDRSDNWKHRLDEYMTKMRQFQKILED  7111

Query  486   LDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTL  545
             L  ++  AE  K SW P     +    + +++++ LR ++      +   N+     T  
Sbjct  7112  LSSRVALAEQTKTSWLPPSS--VGEANEQMQQLQRLRDKMTTASALLDDCNEQQSFFTAN  7285

Query  546   GIQLSPYNLSTLEDLNTRWKLLQVAVEDR--------VRQLHEAHRD---------FGPA  588
              + +    LS LEDLNTR KLLQ+A+++R         +Q HE   D          GP 
Sbjct  7286  QVLVPTPCLSKLEDLNTRMKLLQIAMDERQKVLCQAGAQQTHENGDDGRTTSNSGTIGPL  7465

Query  589   SQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRT  648
                 L  SV+ PWERA +   VPYYI+HE +TT WDHP+M EL + LADLN +RFSAYRT
Sbjct  7466  PN--LGQSVKPPWERATTAANVPYYIDHERETTHWDHPEMIELMKGLADLNEIRFSAYRT  7639

Query  649   AMKLRRLQKALCLDLLSLSAACDALDQHNLK-QNDQPMDILQIINCLTTIYDRLEQEHNN  707
             AMKLR +QK L LD +S+S AC++ D+H L+ QND+ +DI  +   L ++Y  +++    
Sbjct  7640  AMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLIDIPDMTTVLHSLYVTIDK----  7807

Query  708   LVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTG  767
              +++ L +D+ +NW+LNVYD+ RTG+IRVLSFK G++ LCK HLE+KYRYLF+ VA +  
Sbjct  7808  -IDLTLMLDLAINWILNVYDSQRTGQIRVLSFKVGLVLLCKGHLEEKYRYLFRLVADTDR  7984

Query  768   FCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA---------NNKPEIEA  818
               DQRRLGLLLHD IQ+PRQLGEVA+FGGSNIEPSVRSC + A         N    IE 
Sbjct  7985  RADQRRLGLLLHDCIQVPRQLGEVAAFGGSNIEPSVRSCLEQAGISQEAIDGNQDISIEL  8164

Query  819   ALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQ  878
               FL W++ EPQS+VWLPVLHR+AAAE AKHQAKCNICKE PI+GFRYR LK FN+D+CQ
Sbjct  8165  QHFLGWLQHEPQSLVWLPVLHRLAAAEAAKHQAKCNICKEYPIVGFRYRCLKCFNFDMCQ  8344

Query  879   SCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQ  938
              CFF GR AK HK+ +PM EYCT TTS EDVRDF + LKNKF++++YF KHPR+GYLPVQ
Sbjct  8345  KCFFFGRNAKNHKLTHPMHEYCTTTTSTEDVRDFTRALKNKFKSRKYFKKHPRVGYLPVQ  8524

Query  939   TVLEGDNMETPASSPQLS----HDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDD  994
             +VLEGD +E+PA SPQ +     +D HSR+E YASRLA++E     Y     +     DD
Sbjct  8525  SVLEGDALESPAPSPQHTTHQLQNDMHSRLEMYASRLAQVE-----YGGTGSNSTPDSDD  8689

Query  995   EHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRL  1054
             EH LI  YCQ+L   S  S P+SP Q++ ++++E+R ELE I+ DLEEEN NLQAEY +L
Sbjct  8690  EHQLIAQYCQALPGTSNGSAPKSPVQVMAAMDAEQREELEAIIRDLEEENANLQAEYQQL  8869

Query  1055  KQQHEHKGLSPLP--------SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQIL  1106
               + +    S +P        S   M   S Q  +  +++AEAKLLRQHKGRLEARMQIL
Sbjct  8870  CSKEQ----SGMPEDSNGMQHSSSSMTGLSGQGEQGQDMMAEAKLLRQHKGRLEARMQIL  9037

Query  1107  EDHNKQLESQLHRLRQLLEQP  1127
             EDHN+QLE+QL RLRQLL++P
Sbjct  9038  EDHNRQLEAQLQRLRQLLDEP  9100


>ref|XM_001954777.1| Drosophila ananassae GF16554 (Dana\GF16554), mRNA
Length=10494

 Score =  894 bits (2310),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 504/1178 (42%), Positives = 722/1178 (61%), Gaps = 91/1178 (7%)
 Frame = +1

Query  13     ADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELIT  72
                F+++  +++DWL+    +IK Q V+V D++ +   I KQ+  +++L+ ++PQL EL+ 
Sbjct  6718   GSFDKSVLQISDWLTWEQNMIKIQSVLVDDVDAVRLAIEKQEKVLRELKMKKPQLNELVH  6897

Query  73     AAQNLKNKTSNQE-----------ARTIITD--------RIERIQNQWDEVQEHLQNRRQ  113
               A+ LK+    Q+           A     D        ++ R++  WDE  + +  R  
Sbjct  6898   TAEVLKSDVKRQQLQEKELKQFSLAPHCSADLDYMRCCLKVTRLREHWDETSQCVLQRAA  7077

Query  114    QLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQW  173
              QL  ML DS ++   + E E+ L +   + E       T D ++ +  E K    +L Q 
Sbjct  7078   QLKNMLSDSQRFEAKRVELEKWLTRMEQRAERMGTIATTADILEAQQKEQKSFHAELHQN  7257

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              + + D+ N+L  KL+  Y  DDT ++  +TE IN  + +++  V  R   L      LQ 
Sbjct  7258   KQHFDLFNELTQKLIAVYPNDDTTRIKKMTEAINQRYANLNNGVINRGKQLHAAVHNLQS  7437

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYH  293
              F   +++FLA+L+E ET     +    +  L+            ++DLQ EIE H  VY 
Sbjct  7438   FDRAMDQFLAFLSETETLCENAESDIERNPLM------------FKDLQSEIETHRVVYD  7581

Query  294    NLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLS  353
               LD   +K+L SL   +DAV+LQRRLD MN +W+ L+ KS+ IR+ LE++S+ W  L LS
Sbjct  7582   RLDGTGRKLLGSLTSQEDAVMLQRRLDEMNQRWNNLKSKSIAIRNRLESNSEHWNALLLS  7761

Query  354    LQELLVWLQLKDDELSRQA--PIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
              L+EL  W+  KD ELS     P+ GD  ++QKQ D H+AF+R+L+ K P++ S L + R 
Sbjct  7762   LRELTEWVIRKDTELSTLGLGPVRGDAASLQKQLDDHKAFRRQLEDKRPIVESNLTSGRQ  7941

Query  412    FLTEQPL-----EGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQ  466
              ++  +       +       + R L  EE+++ +TR +R++  +++ +W  L   S +W+
Sbjct  7942   YIANEAAVSDTSDSEANHDSDSRYLSAEEQSRELTRSIRREVGKLSEQWNNLIDRSDNWK  8121

Query  467    RKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIA  526
               ++DE + ++++ Q+  ++L  ++  AE  K SW P     +    + +++++ LR ++ 
Sbjct  8122   HRLDEYMTKMRQFQKILEDLSSRVALAEQTKTSWLPPAS--VGEANEQMQQLQRLRDKMT  8295

Query  527    PLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDR--------VRQL  578
                   +   N+     T   + +    LS LEDLNTR KLLQ+A+++R         +Q 
Sbjct  8296   TASALLDDCNEQQSFFTANQVLVPTPCLSKLEDLNTRMKLLQIAMDERQKVLCQNGAQQS  8475

Query  579    HEAHRD---------FGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMT  629
              HE   D          GP     L  SV+ PWERA +   VPYYI+HE +TT WDHP+M 
Sbjct  8476   HENGDDGRTTSNSGTIGPLPN--LGQSVKPPWERATTSANVPYYIDHERETTHWDHPEMI  8649

Query  630    ELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK-QNDQPMDIL  688
              EL + LADLN +RFSAYRTAMKLR +QK L LD +S++ AC++ D+H L+ QND+ +DI 
Sbjct  8650   ELMKGLADLNEIRFSAYRTAMKLRSVQKRLALDRISMATACESFDRHGLRAQNDKLIDIP  8829

Query  689    QIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCK  748
               +   L ++Y  +++     +++ L +D+ +NW+LNVYD+ RTG+IRVLSFK G++ LCK
Sbjct  8830   DMTTVLHSLYVTIDK-----IDLTLMLDLAINWILNVYDSQRTGQIRVLSFKVGLVLLCK  8994

Query  749    AHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQ  808
               HLE+KYRYLF+ VA +    DQRRLGLLLHD IQ+PRQLGEVA+FGGSNIEPSVRSC +
Sbjct  8995   GHLEEKYRYLFRLVADTERRADQRRLGLLLHDCIQVPRQLGEVAAFGGSNIEPSVRSCLE  9174

Query  809    FA---------NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKEC  859
               A         N +  IE   FL W++ EPQS+VWLPVLHR+AAAE AKHQAKCNICKE 
Sbjct  9175   QAGISQEAIDGNQEISIELQHFLGWLQHEPQSLVWLPVLHRLAAAEAAKHQAKCNICKEY  9354

Query  860    PIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNK  919
              PI+GFRYR LK FN+D+CQ CFF GR AK HK+ +PM EYCT TTS EDVRDF + LKNK
Sbjct  9355   PIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHPMHEYCTTTTSTEDVRDFGRALKNK  9534

Query  920    FRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLS----HDDTHSRIEHYASRLAEME  975
              F++++YF KHPR+GYLPVQ+VLEGD +E+PA SPQ +      D HSR+E YASRLA++E
Sbjct  9535   FKSRKYFKKHPRVGYLPVQSVLEGDALESPAPSPQHTTHQLQSDMHSRLEMYASRLAQVE  9714

Query  976    NSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELER  1035
                   Y     +     DDEH LI  YCQ+L   S  S P+SP Q++ ++++E+R ELE 
Sbjct  9715   -----YGGTGSNSTPDSDDEHQLIAQYCQALPGTSNGSAPKSPVQVMAAMDAEQREELEA  9879

Query  1036   ILADLEEENRNLQAEYDRL--KQQ----HEHKGLSPLPSPPEMMPTSPQSPRDAELIAEA  1089
              I+ DLEEEN NLQAEY +L  KQQ     +  G+    S   M   S Q  +  +++AEA
Sbjct  9880   IIRDLEEENANLQAEYQQLCSKQQSGTPEDSNGMQ--HSSSSMTGLSGQGEQGQDMMAEA  10053

Query  1090   KLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              KLLRQHKGRLEARMQILEDHN+QLE+QL RLRQLL++P
Sbjct  10054  KLLRQHKGRLEARMQILEDHNRQLEAQLQRLRQLLDEP  10167


>ref|NM_001043257.1| Drosophila melanogaster dystrophin (Dys), transcript variant 
H, mRNA
Length=11967

 Score =  894 bits (2309),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 502/1180 (42%), Positives = 719/1180 (60%), Gaps = 95/1180 (8%)
 Frame = +1

Query  13     ADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELIT  72
                F+++  +++DWL+    +IK Q V+V D + +   I KQ+  +++L+ ++PQL EL+ 
Sbjct  7150   GSFDKSVLQISDWLTWEQNMIKIQSVLVDDGDAVRLAIEKQEKVLRELKMKKPQLNELVH  7329

Query  73     AAQNLKNKTSNQE-----------ARTIITD--------RIERIQNQWDEVQEHLQNRRQ  113
               A+ LK     Q+           A     D        ++ R++  WDE  + +  R  
Sbjct  7330   TAEVLKGDVKRQQLQEKELKQFSLAPHCSADLDYMRCCLKVTRLREHWDETSQCVLQRAA  7509

Query  114    QLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQW  173
              QL  ML DS ++   + E E+ L +   + E       T D ++ +  E K    +L Q 
Sbjct  7510   QLKNMLSDSQRFEAKRLELEKWLARMEQRAERMGTIATTADILEAQQKEQKSFHAELHQN  7689

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              + + D+ N+L  KL+  Y  DDT ++  +TE IN  + +++  V  R   L      LQ 
Sbjct  7690   KQHFDIFNELTQKLIAVYPNDDTTRIKKMTEVINQRYANLNSGVINRGKQLHAAVHSLQS  7869

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYH  293
              F   +++FLA+L+E ET     +    +  L+            ++DLQ EIE H  VY 
Sbjct  7870   FDRAMDQFLAFLSETETLCENAESDIERNPLM------------FKDLQSEIETHRVVYD  8013

Query  294    NLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLS  353
               LD   +K+L SL   +DAV+LQRRLD MN +W+ L+ KS+ IR+ LE++S+ W  L LS
Sbjct  8014   RLDGTGRKLLGSLTSQEDAVMLQRRLDEMNQRWNNLKSKSIAIRNRLESNSEHWNALLLS  8193

Query  354    LQELLVWLQLKDDELSRQA--PIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
              L+EL  W+  KD ELS     P+ GD  ++QKQ D H+AF+R+L+ K P++ S L + R 
Sbjct  8194   LRELTEWVIRKDTELSTLGLGPVRGDAVSLQKQLDDHKAFRRQLEDKRPIVESNLTSGRQ  8373

Query  412    FLTEQPL-----EGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQ  466
              ++  +       +       + R +  EE+++ +TR +R++  +++ +W  L   S +W+
Sbjct  8374   YIANEAAVSDTSDTEANHDSDSRYMSAEEQSRELTRSIRREVGKLSEQWNNLIDRSDNWK  8553

Query  467    RKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIA  526
               ++DE + ++++ Q+  ++L  ++  AE  K SW P     +    + +++++ LR ++ 
Sbjct  8554   HRLDEYMTKMRQFQKILEDLSSRVALAEQTKTSWLPPSS--VGEANEQMQQLQRLRDKMT  8727

Query  527    PLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDR--------VRQL  578
                   +   N+     T   + +    LS LEDLNTR KLLQ+A+++R         +Q 
Sbjct  8728   TASALLDDCNEQQSFFTANQVLVPTPCLSKLEDLNTRMKLLQIAMDERQKVLCQAGAQQT  8907

Query  579    HEAHRD---------FGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMT  629
              HE   D          GP     L  SV+ PWERA +   VPYYI+HE +TT WDHP+M 
Sbjct  8908   HENGDDGRTTSNSGTIGPLPN--LGQSVKPPWERATTAANVPYYIDHERETTHWDHPEMI  9081

Query  630    ELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK-QNDQPMDIL  688
              EL + LADLN +RFSAYRTAMKLR +QK L LD +S+S AC++ D+H L+ QND+ +DI 
Sbjct  9082   ELMKGLADLNEIRFSAYRTAMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLIDIP  9261

Query  689    QIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCK  748
               +   L ++Y  +++     +++ L +D+ +NW+LNVYD+ RTG+IRVLSFK G++ LCK
Sbjct  9262   DMTTVLHSLYVTIDK-----IDLTLMLDLAINWILNVYDSQRTGQIRVLSFKVGLVLLCK  9426

Query  749    AHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQ  808
               HLE+KYRYLF+ VA +    DQRRLGLLLHD IQ+PRQLGEVA+FGGSNIEPSVRSC +
Sbjct  9427   GHLEEKYRYLFRLVADTDRRADQRRLGLLLHDCIQVPRQLGEVAAFGGSNIEPSVRSCLE  9606

Query  809    FA---------NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKEC  859
               A         N    IE   FL W++ EPQS+VWLPVLHR+AAAE AKHQAKCNICKE 
Sbjct  9607   QAGISQEAIDGNQDISIELQHFLGWLQHEPQSLVWLPVLHRLAAAEAAKHQAKCNICKEY  9786

Query  860    PIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNK  919
              PI+GFRYR LK FN+D+CQ CFF GR AK HK+ +PM EYCT TTS EDVRDF + LKNK
Sbjct  9787   PIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHPMHEYCTTTTSTEDVRDFTRALKNK  9966

Query  920    FRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLS----HDDTHSRIEHYASRLAEME  975
              F++++YF KHPR+GYLPVQ+VLEGD +E+PA SPQ +     +D HSR+E YASRLA++E
Sbjct  9967   FKSRKYFKKHPRVGYLPVQSVLEGDALESPAPSPQHTTHQLQNDMHSRLEMYASRLAQVE  10146

Query  976    NSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELER  1035
                   Y     +     DDEH LI  YCQ+L   S  S P+SP Q++ ++++E+R ELE 
Sbjct  10147  -----YGGTGSNSTPDSDDEHQLIAQYCQALPGTSNGSAPKSPVQVMAAMDAEQREELEA  10311

Query  1036   ILADLEEENRNLQAEYDRLKQQHEHKGLSPLP--------SPPEMMPTSPQSPRDAELIA  1087
              I+ DLEEEN NLQAEY +L  + +    S +P        S   M   S Q  +  +++A
Sbjct  10312  IIRDLEEENANLQAEYQQLCSKEQ----SGMPEDSNGMQHSSSSMTGLSGQGEQGQDMMA  10479

Query  1088   EAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              EAKLLRQHKGRLEARMQILEDHN+QLE+QL RLRQLL++P
Sbjct  10480  EAKLLRQHKGRLEARMQILEDHNRQLEAQLQRLRQLLDEP  10599


>gb|AF297644.1|AF297644 Drosophila melanogaster dystrophin-like protein DLP2 mRNA, complete 
cds
Length=11000

 Score =  892 bits (2306),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 505/1183 (42%), Positives = 721/1183 (60%), Gaps = 96/1183 (8%)
 Frame = +1

Query  11     ALA-DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEE  69
              ALA  F+++  +++DWL+    +IK Q V+V D + +   I KQ+  +++L+ ++PQL E
Sbjct  7141   ALAGSFDKSVLQISDWLTWEQNMIKIQSVLVDDGDAVRLAIEKQEKVLRELKMKKPQLNE  7320

Query  70     LITAAQNLKNKTSNQE-----------ARTIITD--------RIERIQNQWDEVQEHLQN  110
              L+  A+ LK     Q+           A     D        ++ R++  WDE  + +  
Sbjct  7321   LVHTAEVLKGDVKRQQLQEKELKQFSLAPHCSADLDYMRCCLKVTRLREHWDETSQCVLQ  7500

Query  111    RRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDL  170
              R  QL  ML DS ++   + E E+ L +   + E       T D ++ +  E K    +L
Sbjct  7501   RAAQLKNMLSDSQRFEAKRLELEKWLARMEQRAERMGTIATTADILEAQQKEQKSFHAEL  7680

Query  171    RQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRL  230
               Q + + D+ N+L  KL+  Y  DDT ++  +TE IN  + +++  V  R   L      
Sbjct  7681   HQNKQHFDIFNELTQKLIAVYPNDDTTRIKKMTEVINQRYANLNSGVINRGKQLHAAVHS  7860

Query  231    LQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTD  290
              LQ F   +++FLA+L+E ET     +    +  L+            ++DLQ EIE H  
Sbjct  7861   LQSFDRAMDQFLAFLSETETLCENAESDIERNPLM------------FKDLQSEIETHRV  8004

Query  291    VYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRL  350
              VY  LD   +K+L SL   +DAV+LQRRLD MN +W+ L+ KS+ IR+ LE++S+ W  L
Sbjct  8005   VYDRLDGTGRKLLGSLTSQEDAVMLQRRLDEMNQRWNNLKSKSIAIRNRLESNSEHWNAL  8184

Query  351    HLSLQELLVWLQLKDDELSRQA--PIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLET  408
               LSL+EL  W+  KD ELS     P+ GD  ++QKQ D H+AF+R+L+ K P++ S L +
Sbjct  8185   LLSLRELTEWVIRKDTELSTLGLGPVRGDAASLQKQLDDHKAFRRQLEDKRPIVESNLTS  8364

Query  409    VRIFLTEQPL-----EGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSA  463
               R ++  +       +       + R +  EE+++ + R +R++  +++ +W  L   S 
Sbjct  8365   GRQYIANEAAVSDTSDTEANHDSDSRYMSAEEQSRELRRSIRREVGKLSEQWNNLLDRSD  8544

Query  464    DWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRG  523
              +W+ ++DE + ++++ Q+  ++L  ++  AE  K SW P     +    + +++++ LR 
Sbjct  8545   NWKHRLDEYMTKMRQFQKILEDLSSRVALAEQTKTSWLPPSS--VGEANEQMQQLQRLRD  8718

Query  524    EIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDR--------V  575
              ++      +   N+     T   + +    LS LEDLNTR KLLQ+A+++R         
Sbjct  8719   KMTTASALLDDCNEQQSFFTANQVLVPTPCLSKLEDLNTRMKLLQIAMDERQKVLCQAGA  8898

Query  576    RQLHEAHRD---------FGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHP  626
              +Q HE   D          GP     L  SV+ PWERA +   VPYYI+HE QTT WDHP
Sbjct  8899   QQTHENGDDGRTTSNSGTIGPLPN--LGQSVKPPWERATTAANVPYYIDHERQTTHWDHP  9072

Query  627    KMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK-QNDQPM  685
              +M EL + LADLN +RFSAYRTAMKLR +QK L LD +S+S AC++ D+H L+ QND+ +
Sbjct  9073   EMIELMKGLADLNEIRFSAYRTAMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLI  9252

Query  686    DILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIIS  745
              DI  +   L ++Y  +++     +++ L +D+ +NW+LNVYD+ RTG+IRVLSFK G++ 
Sbjct  9253   DIPDMTTVLHSLYVTIDK-----IDLTLMLDLAINWILNVYDSQRTGQIRVLSFKVGLVL  9417

Query  746    LCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRS  805
              LCK HLE+KYRYLF+ VA +    DQRRLGLLLHD IQ+PRQLGEVA+FGGSNIEPSVRS
Sbjct  9418   LCKGHLEEKYRYLFRLVADTDRRADQRRLGLLLHDCIQVPRQLGEVAAFGGSNIEPSVRS  9597

Query  806    CFQFA---------NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNIC  856
              C + A         N    IE   FL W++ EPQS+VWLPVLHR+AAAE AKHQAKCNIC
Sbjct  9598   CLEQAGISQEAIDGNQDISIELQHFLGWLQHEPQSLVWLPVLHRLAAAEAAKHQAKCNIC  9777

Query  857    KECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVL  916
              KE PI+GFRYR LK FN+D+CQ CFF GR AK HK+ +PM EYCT TTS EDVRDF + L
Sbjct  9778   KEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHPMHEYCTTTTSTEDVRDFTRAL  9957

Query  917    KNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLS----HDDTHSRIEHYASRLA  972
              KNKF++++YF KHPR+GYLPVQ+VLEGD +E+PA SPQ +     +D HSR+E YASRLA
Sbjct  9958   KNKFKSRKYFKKHPRVGYLPVQSVLEGDALESPAPSPQHTTHQLQNDMHSRLEMYASRLA  10137

Query  973    EMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGE  1032
              ++E     Y     +     DDEH LI  YCQ+L   S  S P+SP Q++ ++++E+R E
Sbjct  10138  QVE-----YGGTGSNSTPDSDDEHQLIAQYCQALPGTSNGSAPKSPVQVMAAMDAEQREE  10302

Query  1033   LERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP--------SPPEMMPTSPQSPRDAE  1084
              LE I+ DLEEEN NLQAEY +L  + +    S +P        S   M   S Q  +  +
Sbjct  10303  LEAIIRDLEEENANLQAEYQQLCSKEQ----SGMPEDSNGMQHSSSSMTGLSGQGEQGQD  10470

Query  1085   LIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              ++AEAKLLRQHKGRLEARMQILEDHN+QLE+QL RLRQLL++P
Sbjct  10471  MMAEAKLLRQHKGRLEARMQILEDHNRQLEAQLQRLRQLLDEP  10599


>ref|NM_001043263.1| Drosophila melanogaster dystrophin (Dys), transcript variant 
F, mRNA
Length=11588

 Score =  892 bits (2305),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 505/1183 (42%), Positives = 722/1183 (61%), Gaps = 96/1183 (8%)
 Frame = +3

Query  11     ALA-DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEE  69
              ALA  F+++  +++DWL+    +IK Q V+V D + +   I KQ+  +++L+ ++PQL E
Sbjct  7065   ALAGSFDKSVLQISDWLTWEQNMIKIQSVLVDDGDAVRLAIEKQEKVLRELKMKKPQLNE  7244

Query  70     LITAAQNLKNKTSNQE-----------ARTIITD--------RIERIQNQWDEVQEHLQN  110
              L+  A+ LK     Q+           A     D        ++ R++  WDE  + +  
Sbjct  7245   LVHTAEVLKGDVKRQQLQEKELKQFSLAPHCSADLDYMRCCLKVTRLREHWDETSQCVLQ  7424

Query  111    RRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDL  170
              R  QL  ML DS ++   + E E+ L +   + E       T D ++ +  E K    +L
Sbjct  7425   RAAQLKNMLSDSQRFEAKRLELEKWLARMEQRAERMGTIATTADILEAQQKEQKSFHAEL  7604

Query  171    RQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRL  230
               Q + + D+ N+L  KL+  Y  DDT ++  +TE IN  + +++  V  R   L      
Sbjct  7605   HQNKQHFDIFNELTQKLIAVYPNDDTTRIKKMTEVINQRYANLNSGVINRGKQLHAAVHS  7784

Query  231    LQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTD  290
              LQ F   +++FLA+L+E ET     +    +  L+            ++DLQ EIE H  
Sbjct  7785   LQSFDRAMDQFLAFLSETETLCENAESDIERNPLM------------FKDLQSEIETHRV  7928

Query  291    VYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRL  350
              VY  LD   +K+L SL   +DAV+LQRRLD MN +W+ L+ KS+ IR+ LE++S+ W  L
Sbjct  7929   VYDRLDGTGRKLLGSLTSQEDAVMLQRRLDEMNQRWNNLKSKSIAIRNRLESNSEHWNAL  8108

Query  351    HLSLQELLVWLQLKDDELSRQA--PIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLET  408
               LSL+EL  W+  KD ELS     P+ GD  ++QKQ D H+AF+R+L+ K P++ S L +
Sbjct  8109   LLSLRELTEWVIRKDTELSTLGLGPVRGDAVSLQKQLDDHKAFRRQLEDKRPIVESNLTS  8288

Query  409    VRIFLTEQPL-----EGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSA  463
               R ++  +       +       + R +  EE+++ +TR +R++  +++ +W  L   S 
Sbjct  8289   GRQYIANEAAVSDTSDTEANHDSDSRYMSAEEQSRELTRSIRREVGKLSEQWNNLIDRSD  8468

Query  464    DWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRG  523
              +W+ ++DE + ++++ Q+  ++L  ++  AE  K SW P     +    + +++++ LR 
Sbjct  8469   NWKHRLDEYMTKMRQFQKILEDLSSRVALAEQTKTSWLPPSS--VGEANEQMQQLQRLRD  8642

Query  524    EIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDR--------V  575
              ++      +   N+     T   + +    LS LEDLNTR KLLQ+A+++R         
Sbjct  8643   KMTTASALLDDCNEQQSFFTANQVLVPTPCLSKLEDLNTRMKLLQIAMDERQKVLCQAGA  8822

Query  576    RQLHEAHRD---------FGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHP  626
              +Q HE   D          GP     L  SV+ PWERA +   VPYYI+HE +TT WDHP
Sbjct  8823   QQTHENGDDGRTTSNSGTIGPLPN--LGQSVKPPWERATTAANVPYYIDHERETTHWDHP  8996

Query  627    KMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK-QNDQPM  685
              +M EL + LADLN +RFSAYRTAMKLR +QK L LD +S+S AC++ D+H L+ QND+ +
Sbjct  8997   EMIELMKGLADLNEIRFSAYRTAMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLI  9176

Query  686    DILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIIS  745
              DI  +   L ++Y  +++     +++ L +D+ +NW+LNVYD+ RTG+IRVLSFK G++ 
Sbjct  9177   DIPDMTTVLHSLYVTIDK-----IDLTLMLDLAINWILNVYDSQRTGQIRVLSFKVGLVL  9341

Query  746    LCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRS  805
              LCK HLE+KYRYLF+ VA +    DQRRLGLLLHD IQ+PRQLGEVA+FGGSNIEPSVRS
Sbjct  9342   LCKGHLEEKYRYLFRLVADTDRRADQRRLGLLLHDCIQVPRQLGEVAAFGGSNIEPSVRS  9521

Query  806    CFQFA---------NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNIC  856
              C + A         N    IE   FL W++ EPQS+VWLPVLHR+AAAE AKHQAKCNIC
Sbjct  9522   CLEQAGISQEAIDGNQDISIELQHFLGWLQHEPQSLVWLPVLHRLAAAEAAKHQAKCNIC  9701

Query  857    KECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVL  916
              KE PI+GFRYR LK FN+D+CQ CFF GR AK HK+ +PM EYCT TTS EDVRDF + L
Sbjct  9702   KEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHPMHEYCTTTTSTEDVRDFTRAL  9881

Query  917    KNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLS----HDDTHSRIEHYASRLA  972
              KNKF++++YF KHPR+GYLPVQ+VLEGD +E+PA SPQ +     +D HSR+E YASRLA
Sbjct  9882   KNKFKSRKYFKKHPRVGYLPVQSVLEGDALESPAPSPQHTTHQLQNDMHSRLEMYASRLA  10061

Query  973    EMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGE  1032
              ++E     Y     +     DDEH LI  YCQ+L   S  S P+SP Q++ ++++E+R E
Sbjct  10062  QVE-----YGGTGSNSTPDSDDEHQLIAQYCQALPGTSNGSAPKSPVQVMAAMDAEQREE  10226

Query  1033   LERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP--------SPPEMMPTSPQSPRDAE  1084
              LE I+ DLEEEN NLQAEY +L  + +    S +P        S   M   S Q  +  +
Sbjct  10227  LEAIIRDLEEENANLQAEYQQLCSKEQ----SGMPEDSNGMQHSSSSMTGLSGQGEQGQD  10394

Query  1085   LIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              ++AEAKLLRQHKGRLEARMQILEDHN+QLE+QL RLRQLL++P
Sbjct  10395  MMAEAKLLRQHKGRLEARMQILEDHNRQLEAQLQRLRQLLDEP  10523


>ref|NM_001043261.1| Drosophila melanogaster dystrophin (Dys), transcript variant 
G, mRNA
Length=11377

 Score =  892 bits (2305),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 505/1183 (42%), Positives = 722/1183 (61%), Gaps = 96/1183 (8%)
 Frame = +2

Query  11     ALA-DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEE  69
              ALA  F+++  +++DWL+    +IK Q V+V D + +   I KQ+  +++L+ ++PQL E
Sbjct  6854   ALAGSFDKSVLQISDWLTWEQNMIKIQSVLVDDGDAVRLAIEKQEKVLRELKMKKPQLNE  7033

Query  70     LITAAQNLKNKTSNQE-----------ARTIITD--------RIERIQNQWDEVQEHLQN  110
              L+  A+ LK     Q+           A     D        ++ R++  WDE  + +  
Sbjct  7034   LVHTAEVLKGDVKRQQLQEKELKQFSLAPHCSADLDYMRCCLKVTRLREHWDETSQCVLQ  7213

Query  111    RRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDL  170
              R  QL  ML DS ++   + E E+ L +   + E       T D ++ +  E K    +L
Sbjct  7214   RAAQLKNMLSDSQRFEAKRLELEKWLARMEQRAERMGTIATTADILEAQQKEQKSFHAEL  7393

Query  171    RQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRL  230
               Q + + D+ N+L  KL+  Y  DDT ++  +TE IN  + +++  V  R   L      
Sbjct  7394   HQNKQHFDIFNELTQKLIAVYPNDDTTRIKKMTEVINQRYANLNSGVINRGKQLHAAVHS  7573

Query  231    LQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTD  290
              LQ F   +++FLA+L+E ET     +    +  L+            ++DLQ EIE H  
Sbjct  7574   LQSFDRAMDQFLAFLSETETLCENAESDIERNPLM------------FKDLQSEIETHRV  7717

Query  291    VYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRL  350
              VY  LD   +K+L SL   +DAV+LQRRLD MN +W+ L+ KS+ IR+ LE++S+ W  L
Sbjct  7718   VYDRLDGTGRKLLGSLTSQEDAVMLQRRLDEMNQRWNNLKSKSIAIRNRLESNSEHWNAL  7897

Query  351    HLSLQELLVWLQLKDDELSRQA--PIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLET  408
               LSL+EL  W+  KD ELS     P+ GD  ++QKQ D H+AF+R+L+ K P++ S L +
Sbjct  7898   LLSLRELTEWVIRKDTELSTLGLGPVRGDAVSLQKQLDDHKAFRRQLEDKRPIVESNLTS  8077

Query  409    VRIFLTEQPL-----EGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSA  463
               R ++  +       +       + R +  EE+++ +TR +R++  +++ +W  L   S 
Sbjct  8078   GRQYIANEAAVSDTSDTEANHDSDSRYMSAEEQSRELTRSIRREVGKLSEQWNNLIDRSD  8257

Query  464    DWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRG  523
              +W+ ++DE + ++++ Q+  ++L  ++  AE  K SW P     +    + +++++ LR 
Sbjct  8258   NWKHRLDEYMTKMRQFQKILEDLSSRVALAEQTKTSWLPPSS--VGEANEQMQQLQRLRD  8431

Query  524    EIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDR--------V  575
              ++      +   N+     T   + +    LS LEDLNTR KLLQ+A+++R         
Sbjct  8432   KMTTASALLDDCNEQQSFFTANQVLVPTPCLSKLEDLNTRMKLLQIAMDERQKVLCQAGA  8611

Query  576    RQLHEAHRD---------FGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHP  626
              +Q HE   D          GP     L  SV+ PWERA +   VPYYI+HE +TT WDHP
Sbjct  8612   QQTHENGDDGRTTSNSGTIGPLPN--LGQSVKPPWERATTAANVPYYIDHERETTHWDHP  8785

Query  627    KMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK-QNDQPM  685
              +M EL + LADLN +RFSAYRTAMKLR +QK L LD +S+S AC++ D+H L+ QND+ +
Sbjct  8786   EMIELMKGLADLNEIRFSAYRTAMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLI  8965

Query  686    DILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIIS  745
              DI  +   L ++Y  +++     +++ L +D+ +NW+LNVYD+ RTG+IRVLSFK G++ 
Sbjct  8966   DIPDMTTVLHSLYVTIDK-----IDLTLMLDLAINWILNVYDSQRTGQIRVLSFKVGLVL  9130

Query  746    LCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRS  805
              LCK HLE+KYRYLF+ VA +    DQRRLGLLLHD IQ+PRQLGEVA+FGGSNIEPSVRS
Sbjct  9131   LCKGHLEEKYRYLFRLVADTDRRADQRRLGLLLHDCIQVPRQLGEVAAFGGSNIEPSVRS  9310

Query  806    CFQFA---------NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNIC  856
              C + A         N    IE   FL W++ EPQS+VWLPVLHR+AAAE AKHQAKCNIC
Sbjct  9311   CLEQAGISQEAIDGNQDISIELQHFLGWLQHEPQSLVWLPVLHRLAAAEAAKHQAKCNIC  9490

Query  857    KECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVL  916
              KE PI+GFRYR LK FN+D+CQ CFF GR AK HK+ +PM EYCT TTS EDVRDF + L
Sbjct  9491   KEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHPMHEYCTTTTSTEDVRDFTRAL  9670

Query  917    KNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLS----HDDTHSRIEHYASRLA  972
              KNKF++++YF KHPR+GYLPVQ+VLEGD +E+PA SPQ +     +D HSR+E YASRLA
Sbjct  9671   KNKFKSRKYFKKHPRVGYLPVQSVLEGDALESPAPSPQHTTHQLQNDMHSRLEMYASRLA  9850

Query  973    EMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGE  1032
              ++E     Y     +     DDEH LI  YCQ+L   S  S P+SP Q++ ++++E+R E
Sbjct  9851   QVE-----YGGTGSNSTPDSDDEHQLIAQYCQALPGTSNGSAPKSPVQVMAAMDAEQREE  10015

Query  1033   LERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP--------SPPEMMPTSPQSPRDAE  1084
              LE I+ DLEEEN NLQAEY +L  + +    S +P        S   M   S Q  +  +
Sbjct  10016  LEAIIRDLEEENANLQAEYQQLCSKEQ----SGMPEDSNGMQHSSSSMTGLSGQGEQGQD  10183

Query  1085   LIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              ++AEAKLLRQHKGRLEARMQILEDHN+QLE+QL RLRQLL++P
Sbjct  10184  MMAEAKLLRQHKGRLEARMQILEDHNRQLEAQLQRLRQLLDEP  10312


>ref|NM_001043258.1| Drosophila melanogaster dystrophin (Dys), transcript variant 
A, mRNA
Length=11000

 Score =  892 bits (2305),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 505/1183 (42%), Positives = 722/1183 (61%), Gaps = 96/1183 (8%)
 Frame = +1

Query  11     ALA-DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEE  69
              ALA  F+++  +++DWL+    +IK Q V+V D + +   I KQ+  +++L+ ++PQL E
Sbjct  7141   ALAGSFDKSVLQISDWLTWEQNMIKIQSVLVDDGDAVRLAIEKQEKVLRELKMKKPQLNE  7320

Query  70     LITAAQNLKNKTSNQE-----------ARTIITD--------RIERIQNQWDEVQEHLQN  110
              L+  A+ LK     Q+           A     D        ++ R++  WDE  + +  
Sbjct  7321   LVHTAEVLKGDVKRQQLQEKELKQFSLAPHCSADLDYMRCCLKVTRLREHWDETSQCVLQ  7500

Query  111    RRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDL  170
              R  QL  ML DS ++   + E E+ L +   + E       T D ++ +  E K    +L
Sbjct  7501   RAAQLKNMLSDSQRFEAKRLELEKWLARMEQRAERMGTIATTADILEAQQKEQKSFHAEL  7680

Query  171    RQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRL  230
               Q + + D+ N+L  KL+  Y  DDT ++  +TE IN  + +++  V  R   L      
Sbjct  7681   HQNKQHFDIFNELTQKLIAVYPNDDTTRIKKMTEVINQRYANLNSGVINRGKQLHAAVHS  7860

Query  231    LQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTD  290
              LQ F   +++FLA+L+E ET     +    +  L+            ++DLQ EIE H  
Sbjct  7861   LQSFDRAMDQFLAFLSETETLCENAESDIERNPLM------------FKDLQSEIETHRV  8004

Query  291    VYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRL  350
              VY  LD   +K+L SL   +DAV+LQRRLD MN +W+ L+ KS+ IR+ LE++S+ W  L
Sbjct  8005   VYDRLDGTGRKLLGSLTSQEDAVMLQRRLDEMNQRWNNLKSKSIAIRNRLESNSEHWNAL  8184

Query  351    HLSLQELLVWLQLKDDELSRQA--PIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLET  408
               LSL+EL  W+  KD ELS     P+ GD  ++QKQ D H+AF+R+L+ K P++ S L +
Sbjct  8185   LLSLRELTEWVIRKDTELSTLGLGPVRGDAVSLQKQLDDHKAFRRQLEDKRPIVESNLTS  8364

Query  409    VRIFLTEQPL-----EGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSA  463
               R ++  +       +       + R +  EE+++ +TR +R++  +++ +W  L   S 
Sbjct  8365   GRQYIANEAAVSDTSDTEANHDSDSRYMSAEEQSRELTRSIRREVGKLSEQWNNLIDRSD  8544

Query  464    DWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRG  523
              +W+ ++DE + ++++ Q+  ++L  ++  AE  K SW P     +    + +++++ LR 
Sbjct  8545   NWKHRLDEYMTKMRQFQKILEDLSSRVALAEQTKTSWLPPSS--VGEANEQMQQLQRLRD  8718

Query  524    EIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDR--------V  575
              ++      +   N+     T   + +    LS LEDLNTR KLLQ+A+++R         
Sbjct  8719   KMTTASALLDDCNEQQSFFTANQVLVPTPCLSKLEDLNTRMKLLQIAMDERQKVLCQAGA  8898

Query  576    RQLHEAHRD---------FGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHP  626
              +Q HE   D          GP     L  SV+ PWERA +   VPYYI+HE +TT WDHP
Sbjct  8899   QQTHENGDDGRTTSNSGTIGPLPN--LGQSVKPPWERATTAANVPYYIDHERETTHWDHP  9072

Query  627    KMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK-QNDQPM  685
              +M EL + LADLN +RFSAYRTAMKLR +QK L LD +S+S AC++ D+H L+ QND+ +
Sbjct  9073   EMIELMKGLADLNEIRFSAYRTAMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLI  9252

Query  686    DILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIIS  745
              DI  +   L ++Y  +++     +++ L +D+ +NW+LNVYD+ RTG+IRVLSFK G++ 
Sbjct  9253   DIPDMTTVLHSLYVTIDK-----IDLTLMLDLAINWILNVYDSQRTGQIRVLSFKVGLVL  9417

Query  746    LCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRS  805
              LCK HLE+KYRYLF+ VA +    DQRRLGLLLHD IQ+PRQLGEVA+FGGSNIEPSVRS
Sbjct  9418   LCKGHLEEKYRYLFRLVADTDRRADQRRLGLLLHDCIQVPRQLGEVAAFGGSNIEPSVRS  9597

Query  806    CFQFA---------NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNIC  856
              C + A         N    IE   FL W++ EPQS+VWLPVLHR+AAAE AKHQAKCNIC
Sbjct  9598   CLEQAGISQEAIDGNQDISIELQHFLGWLQHEPQSLVWLPVLHRLAAAEAAKHQAKCNIC  9777

Query  857    KECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVL  916
              KE PI+GFRYR LK FN+D+CQ CFF GR AK HK+ +PM EYCT TTS EDVRDF + L
Sbjct  9778   KEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHPMHEYCTTTTSTEDVRDFTRAL  9957

Query  917    KNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLS----HDDTHSRIEHYASRLA  972
              KNKF++++YF KHPR+GYLPVQ+VLEGD +E+PA SPQ +     +D HSR+E YASRLA
Sbjct  9958   KNKFKSRKYFKKHPRVGYLPVQSVLEGDALESPAPSPQHTTHQLQNDMHSRLEMYASRLA  10137

Query  973    EMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGE  1032
              ++E     Y     +     DDEH LI  YCQ+L   S  S P+SP Q++ ++++E+R E
Sbjct  10138  QVE-----YGGTGSNSTPDSDDEHQLIAQYCQALPGTSNGSAPKSPVQVMAAMDAEQREE  10302

Query  1033   LERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP--------SPPEMMPTSPQSPRDAE  1084
              LE I+ DLEEEN NLQAEY +L  + +    S +P        S   M   S Q  +  +
Sbjct  10303  LEAIIRDLEEENANLQAEYQQLCSKEQ----SGMPEDSNGMQHSSSSMTGLSGQGEQGQD  10470

Query  1085   LIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              ++AEAKLLRQHKGRLEARMQILEDHN+QLE+QL RLRQLL++P
Sbjct  10471  MMAEAKLLRQHKGRLEARMQILEDHNRQLEAQLQRLRQLLDEP  10599


>ref|XM_394154.3| PREDICTED: Apis mellifera similar to dystrophin CG31175-PA, isoform 
A (LOC410677), mRNA
Length=2922

 Score =  890 bits (2301),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 480/977 (49%), Positives = 645/977 (66%), Gaps = 68/977 (6%)
 Frame = +1

Query  280   DLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSH  339
             DLQ EIE H DVY +L+   +K+L SL   DDAV+LQRRLD MN +W  L+ KS+ IR+ 
Sbjct  61    DLQSEIETHRDVYTSLNGTGRKLLSSLASQDDAVMLQRRLDEMNQRWHHLKAKSMAIRNR  240

Query  340   LEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKE  399
             LE++++ W  L LSL+EL+ W+  KD EL+   P+ GD  A+QKQ D HR F+R+L+ K 
Sbjct  241   LESNTEHWNALLLSLRELIEWVIRKDTELTGLGPVCGDVAALQKQEDDHRGFRRQLEDKR  420

Query  400   PVIMSTLETVRIFLTEQP-------------LEGLEKLYQEPRELPPEERAQNVTRLLRK  446
             P++ + L + R ++  +P             L+G  + Y+       EE+A+ +TR +R+
Sbjct  421   PIVENNLLSGRQYIANEPPLSDTSDSEAGRELDGDSRGYRSA-----EEQARELTRSIRR  585

Query  447   QAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDL  506
             +  +++ +W  L   S  W+RK+D+T+ +L+  +E    L    +  + +K  W    D+
Sbjct  586   EVNKLSEQWNALIERSDAWKRKLDDTIGKLRVFREILLFLRDNNKLLKNLKDPWTRFKDI  765

Query  507   ---------LIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLT-TLGIQLSPYNLST  556
                       ++S++D        R   + LK      N +    T     ++SP     
Sbjct  766   GKRRRRSCISLNSVRD--------RSNRSLLK--TVDCNKIQTLFTRNENSEISPCEAKF  915

Query  557   LEDLNTRWKLLQVAVEDRVRQLHEAHRDFG-PASQHFLSTSVQGPWERAISPNKVPYYIN  615
                   RWK+LQVAV++R + L    +D   P SQ FL++SV+ PWERA++P KVPYYIN
Sbjct  916   FACFR-RWKVLQVAVDERYKLLSGFGKDGSTPGSQAFLASSVEPPWERALTPAKVPYYIN  1092

Query  616   HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQ  675
             H+++TT WDHPKM EL  SLADLN VRFSAYRTAMKLR +QK LCLD+LSLS A +  D 
Sbjct  1093  HQSETTHWDHPKMIELMSSLADLNEVRFSAYRTAMKLRTVQKRLCLDMLSLSTALEQFDS  1272

Query  676   HNLK-QNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             H L+ QND+ +DI  ++  LT++Y+ +  ++   V+VPLC+D+ +NWLLNVYD+ RTG+I
Sbjct  1273  HGLRAQNDKLIDIPDMVTVLTSLYEVITADNPTQVSVPLCIDLAINWLLNVYDSQRTGQI  1452

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFK G++ LCK HLE+KYRYLF+ +A      DQR+LGLLLHD IQ+PRQLGEVA+F
Sbjct  1453  RVLSFKVGLVLLCKGHLEEKYRYLFRLIADPNRLVDQRKLGLLLHDCIQVPRQLGEVAAF  1632

Query  795   GGSNIEPSVRSCFQFAN-NKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKC  853
             GGSNIEPSVRSCF+ A  +K EIEA  FL W++ EPQSMVWLPVLHR++AAE+AKHQAKC
Sbjct  1633  GGSNIEPSVRSCFEKAGKDKNEIEAVHFLSWLQQEPQSMVWLPVLHRLSAAESAKHQAKC  1812

Query  854   NICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFA  913
             NICKE PIIGFRYR LK FN+D+CQ+CFFSGR AK HK+ +PM EYCT TTSGEDVRDF 
Sbjct  1813  NICKEYPIIGFRYRCLKCFNFDMCQNCFFSGRKAKNHKLTHPMQEYCTATTSGEDVRDFT  1992

Query  914   KVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLS--HDDTHSRIEHYASRL  971
             + L+NKF++KRYF KHPR+GYLPVQTVLEGD +E+PA SPQ S    D HSR+E YASRL
Sbjct  1993  RALRNKFKSKRYFKKHPRVGYLPVQTVLEGDALESPAPSPQHSSLSQDMHSRLEMYASRL  2172

Query  972   AEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERG  1031
             AE+E S       + +P+   DDEH LI HYCQSLN    ++ PRSP Q++ ++++E+R 
Sbjct  2173  AEVELSR---TRSNSTPDS--DDEHQLIAHYCQSLNGGDNVNVPRSPVQVMAAIDAEQRE  2337

Query  1032  ELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKL  1091
             ELE ++ +LEEEN  LQAEY+RL+ + +  G +P        P       D ++IAEAKL
Sbjct  2338  ELEAMIRELEEENATLQAEYERLRSK-QTPGSTPEDGHGNRQP-------DCDMIAEAKL  2493

Query  1092  LRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSS  1151
             LRQHKGRLEARMQILEDHN+QLE+QL RLRQLL++P A +     T+ + S +  +  + 
Sbjct  2494  LRQHKGRLEARMQILEDHNRQLEAQLQRLRQLLDEPNASSPSKTGTLQTRSVTASQLATD  2673

Query  1152  QPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSR-GHNVGSLFHMAD  1210
              P  +        DS G          ++ G    +E+      S    HNVG+L HMA 
Sbjct  2674  SPAKM---NGHYHDSPG-------GGGSNEGRVSSLERPPPPPHSHSVAHNVGNLLHMAG  2823

Query  1211  DLGRAMESLVSVMTDEE  1227
             DLG+A+  LV+VMT E+
Sbjct  2824  DLGKAVGELVTVMTSED  2874


>ref|XM_001946756.1| PREDICTED: Acyrthosiphon pisum similar to dystrophin CG34157-PD 
(LOC100168806), mRNA
Length=3738

 Score =  863 bits (2230),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 460/977 (47%), Positives = 642/977 (65%), Gaps = 69/977 (7%)
 Frame = +1

Query  279   QDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRS  338
             ++LQ E+E  +   ++LD + +K+L SL   +DAV+LQRRL+ MN +W++L+ +S+ IR+
Sbjct  913   KELQQEMETKSQSLNSLDTSGRKLLGSLSSQEDAVMLQRRLEEMNQRWNQLKNRSVTIRN  1092

Query  339   HLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTK  398
              LE +++ W  L LSL+EL+ W+  KD E+S   P+G D   +QKQ D HR F+R+L+ K
Sbjct  1093  RLENNTEHWNTLLLSLRELVEWVIKKDTEISSFGPLGNDLVTLQKQQDDHRGFRRQLEEK  1272

Query  399   EPVIMSTLETVRIFLTEQPL-------EGLEKLYQEPRELPPEERAQNVTRLLRKQAEEV  451
              PVI S L + R ++  +         E +            EE+A+++T  L+++   V
Sbjct  1273  RPVIDSNLRSGRQYINNESQIASAVKNEEINNTGDSRGYRSAEEQARDLTISLKREVLRV  1452

Query  452   NTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSL  511
             + +W  L   S  WQR ++++++++Q  Q+  ++   KL   E +  SW P  +   DS 
Sbjct  1453  SEQWNSLLQRSDQWQRSLNDSIKKMQVFQKGLEDCTSKLASVEAMYKSW-PASNT-GDST  1626

Query  512   QDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAV  571
             +  L++++     + P++  +  VND A  L +  + +S  N + L+D+N RWK+LQ+A+
Sbjct  1627  KG-LQELRQFGDRLNPVQRLLEEVNDQASILASNNVTISVSNKNMLQDINNRWKVLQLAM  1803

Query  572   EDRVRQLHEAHRDF-------GPASQH------FLSTSVQGPWERAISPNKVPYYINHET  618
             +DR +Q+ +  ++         PAS         LS SV+ PW+R I+PNKVPYYINH+ 
Sbjct  1804  DDRYKQIRDTGKNTISNSNGTSPASHSEASTSLLLSGSVEPPWKREITPNKVPYYINHKC  1983

Query  619   QTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNL  678
             ++T WDHPKM EL  SL++ N+VRFSAYRTAMKLR +QK + LDLL+L AA +A D H L
Sbjct  1984  ESTNWDHPKMMELMSSLSEFNDVRFSAYRTAMKLRTVQKRMSLDLLTLEAALEAFDNHGL  2163

Query  679   K-QNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVL  737
             + QND+ + + +++  L +I+D L  +H +LV+VPLC+D+ LNWLLNVYD+ RTG+IRVL
Sbjct  2164  RAQNDKLITVSEMLTILGSIFDTLASQHPSLVHVPLCLDLSLNWLLNVYDSQRTGQIRVL  2343

Query  738   SFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGS  797
             SFK G++ LCK HLE+KYRYLF+ +A      DQR+LGLLLHD IQ+PRQLGEVASFGGS
Sbjct  2344  SFKVGLVLLCKGHLEEKYRYLFRLIADPNRQVDQRKLGLLLHDCIQLPRQLGEVASFGGS  2523

Query  798   NIEPSVRSCFQFAN-NKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNIC  856
             NIEPSVRSCFQ A  +K  IEA  FL W++ EPQSMVWL VLHR+A AE+AKHQAKCNIC
Sbjct  2524  NIEPSVRSCFQKAGKDKTVIEAMHFLVWLQQEPQSMVWLAVLHRLAEAESAKHQAKCNIC  2703

Query  857   KECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVL  916
             K  PIIGFRYR LK FN+D+CQSCFFSGR AK HK+ +PM EYCT TTSGEDVRDF + L
Sbjct  2704  KTYPIIGFRYRCLKCFNFDMCQSCFFSGRKAKHHKLTHPMQEYCTTTTSGEDVRDFTRAL  2883

Query  917   KNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHD-----DTHSRIEHYASRL  971
             +NKF++KRYF KHPR+GYLPVQ+VLEGD +E+P+ SPQ S+      D H+R+E YASRL
Sbjct  2884  RNKFKSKRYFKKHPRVGYLPVQSVLEGDALESPSPSPQHSNTPSTIPDVHNRLEMYASRL  3063

Query  972   AEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPL--SQPRSPAQILISLESEE  1029
             AE+E     Y   S S  +S +DEH LI  YCQSLN  S    S PRSP QI++++++++
Sbjct  3064  AEVE-----YRARSNSTPDS-EDEHHLIAQYCQSLNGGSETLPSVPRSPVQIMVAIDADQ  3225

Query  1030  RGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEA  1089
             R ELE ++ +LE+EN +LQ EY++LK     KG   +          P +  + ++++EA
Sbjct  3226  RHELETMIKELEDENTHLQEEYEKLKTGTGSKGSYNI---------MPNNNGEVDMVSEA  3378

Query  1090  KLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSD  1149
             ++LRQHKGRLEARMQILEDHN+QLE+QL RLRQLLE+P         T  + S ++ +  
Sbjct  3379  RMLRQHKGRLEARMQILEDHNRQLEAQLQRLRQLLEEP--------ATFQTRSVTVSQLA  3534

Query  1150  SSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMA  1209
                PM        +SD  G          +       +E+       +  H VG+L HMA
Sbjct  3535  CDSPM------QNSSDKSGNW--------SENNSRNTLERPPPPPIPASHHAVGNLHHMA  3672

Query  1210  DDLGRAMESLVSVMTDE  1226
              DLG+ +  LV+VMT E
Sbjct  3673  GDLGKVVTELVTVMTTE  3723


>ref|NM_001043256.1| Drosophila melanogaster dystrophin (Dys), transcript variant 
B, mRNA
Length=5153

 Score =  863 bits (2229),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 477/1081 (44%), Positives = 673/1081 (62%), Gaps = 76/1081 (7%)
 Frame = +1

Query  93    RIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYT  152
             ++ R++  WDE  + +  R  QL  ML DS ++   + E E+ L +   + E       T
Sbjct  1600  QVTRLREHWDETSQCVLQRAAQLKNMLSDSQRFEAKRLELEKWLARMEQRAERMGTIATT  1779

Query  153   VDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRS  212
              D ++ +  E K    +L Q + + D+ N+L  KL+  Y  DDT ++  +TE IN  + +
Sbjct  1780  ADILEAQQKEQKSFHAELHQNKQHFDIFNELTQKLIAVYPNDDTTRIKKMTEVINQRYAN  1959

Query  213   IHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVK  272
             ++  V  R   L      LQ F   +++FLA+L+E ET     +    +  L+       
Sbjct  1960  LNSGVINRGKQLHAAVHSLQSFDRAMDQFLAFLSETETLCENAESDIERNPLM-------  2118

Query  273   ELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKK  332
                  ++DLQ EIE H  VY  LD   +K+L SL   +DAV+LQRRLD MN +W+ L+ K
Sbjct  2119  -----FKDLQSEIETHRVVYDRLDGTGRKLLGSLTSQEDAVMLQRRLDEMNQRWNNLKSK  2283

Query  333   SLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQA--PIGGDFPAVQKQNDVHRA  390
             S+ IR+ LE++S+ W  L LSL+EL  W+  KD ELS     P+ GD  ++QKQ D H+A
Sbjct  2284  SIAIRNRLESNSEHWNALLLSLRELTEWVIRKDTELSTLGLGPVRGDAVSLQKQLDDHKA  2463

Query  391   FKRELKTKEPVIMSTLETVRIFLTEQPL-----EGLEKLYQEPRELPPEERAQNVTRLLR  445
             F+R+L+ K P++ S L + R ++  +       +       + R +  EE+++ +TR +R
Sbjct  2464  FRRQLEDKRPIVESNLTSGRQYIANEAAVSDTSDTEANHDSDSRYMSAEEQSRELTRSIR  2643

Query  446   KQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGD  505
             ++  +++ +W  L   S +W+ ++DE + ++++ Q+  ++L  ++  AE  K SW P   
Sbjct  2644  REVGKLSEQWNNLIDRSDNWKHRLDEYMTKMRQFQKILEDLSSRVALAEQTKTSWLPPSS  2823

Query  506   LLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWK  565
               +    + +++++ LR ++      +   N+     T   + +    LS LEDLNTR K
Sbjct  2824  --VGEANEQMQQLQRLRDKMTTASALLDDCNEQQSFFTANQVLVPTPCLSKLEDLNTRMK  2997

Query  566   LLQVAVEDR--------VRQLHEAHRD---------FGPASQHFLSTSVQGPWERAISPN  608
             LLQ+A+++R         +Q HE   D          GP     L  SV+ PWERA +  
Sbjct  2998  LLQIAMDERQKVLCQAGAQQTHENGDDGRTTSNSGTIGPLPN--LGQSVKPPWERATTAA  3171

Query  609   KVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSA  668
              VPYYI+HE +TT WDHP+M EL + LADLN +RFSAYRTAMKLR +QK L LD +S+S 
Sbjct  3172  NVPYYIDHERETTHWDHPEMIELMKGLADLNEIRFSAYRTAMKLRSVQKRLALDRISMST  3351

Query  669   ACDALDQHNLK-QNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYD  727
             AC++ D+H L+ QND+ +DI  +   L ++Y  +++     +++ L +D+ +NW+LNVYD
Sbjct  3352  ACESFDRHGLRAQNDKLIDIPDMTTVLHSLYVTIDK-----IDLTLMLDLAINWILNVYD  3516

Query  728   TGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQ  787
             + RTG+IRVLSFK G++ LCK HLE+KYRYLF+ VA +    DQRRLGLLLHD IQ+PRQ
Sbjct  3517  SQRTGQIRVLSFKVGLVLLCKGHLEEKYRYLFRLVADTDRRADQRRLGLLLHDCIQVPRQ  3696

Query  788   LGEVASFGGSNIEPSVRSCFQFA---------NNKPEIEAALFLDWMRLEPQSMVWLPVL  838
             LGEVA+FGGSNIEPSVRSC + A         N    IE   FL W++ EPQS+VWLPVL
Sbjct  3697  LGEVAAFGGSNIEPSVRSCLEQAGISQEAIDGNQDISIELQHFLGWLQHEPQSLVWLPVL  3876

Query  839   HRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVE  898
             HR+AAAE AKHQAKCNICKE PI+GFRYR LK FN+D+CQ CFF GR AK HK+ +PM E
Sbjct  3877  HRLAAAEAAKHQAKCNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHPMHE  4056

Query  899   YCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLS--  956
             YCT TTS EDVRDF + LKNKF++++YF KHPR+GYLPVQ+VLEGD +E+PA SPQ +  
Sbjct  4057  YCTTTTSTEDVRDFTRALKNKFKSRKYFKKHPRVGYLPVQSVLEGDALESPAPSPQHTTH  4236

Query  957   --HDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQ  1014
                +D HSR+E YASRLA++E     Y     +     DDEH LI  YCQ+L   S  S 
Sbjct  4237  QLQNDMHSRLEMYASRLAQVE-----YGGTGSNSTPDSDDEHQLIAQYCQALPGTSNGSA  4401

Query  1015  PRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP-------  1067
             P+SP Q++ ++++E+R ELE I+ DLEEEN NLQAEY +L  + +    S +P       
Sbjct  4402  PKSPVQVMAAMDAEQREELEAIIRDLEEENANLQAEYQQLCSKEQ----SGMPEDSNGMQ  4569

Query  1068  -SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQ  1126
              S   M   S Q  +  +++AEAKLLRQHKGRLEARMQILEDHN+QLE+QL RLRQLL++
Sbjct  4570  HSSSSMTGLSGQGEQGQDMMAEAKLLRQHKGRLEARMQILEDHNRQLEAQLQRLRQLLDE  4749

Query  1127  P  1127
             P
Sbjct  4750  P  4752


>gb|DQ440978.1| Petromyzon marinus dystrophin mRNA, partial cds
Length=2319

 Score =  862 bits (2228),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 423/624 (67%), Positives = 491/624 (78%), Gaps = 49/624 (7%)
 Frame = +3

Query  623   WDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQND  682
             WDHPKMTELYQSL+DLNNVRFSAYRTAMKLRRLQKALCLDL+SL A  +  +Q  LKQND
Sbjct  9     WDHPKMTELYQSLSDLNNVRFSAYRTAMKLRRLQKALCLDLVSLDALTNVFEQSGLKQND  188

Query  683   QPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTG  742
             + MD+ + + CLTTIY  LE++H++LVN+PLCVDMCLNWLLNVYDTGR G+IR LSFKTG
Sbjct  189   RLMDVSEAVGCLTTIYQGLERKHSDLVNLPLCVDMCLNWLLNVYDTGRGGKIRELSFKTG  368

Query  743   IISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPS  802
             ++SL  AHLEDKYR+LFKQVAS +G CDQRRLGL+LHD++QIPRQLGEVASFGGSNIEPS
Sbjct  369   LVSLSNAHLEDKYRFLFKQVASVSGLCDQRRLGLMLHDAVQIPRQLGEVASFGGSNIEPS  548

Query  803   VRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPII  862
             VRSCFQFAN +PEIEA +FL+WMR+EPQSMVWLPVLHRVAA+ETAKHQAKCNICKECPI+
Sbjct  549   VRSCFQFANGRPEIEATMFLEWMRMEPQSMVWLPVLHRVAASETAKHQAKCNICKECPIV  728

Query  863   GFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRT  922
             GFRYRSLKHFNYD+CQSCFFSGR AKGHK+ YPMVEYCTPTTSGED+RDFAKVLKNKF++
Sbjct  729   GFRYRSLKHFNYDVCQSCFFSGRTAKGHKLSYPMVEYCTPTTSGEDIRDFAKVLKNKFKS  908

Query  923   KRYFAKHPRMGYLPVQTVLEGDNMETPAS-------------SPQLSHDDTHSRIEHYAS  969
             K+YF KHPR+GYLPVQTVLEGD++ETP +             SPQLS++DTH+RIEH AS
Sbjct  909   KKYFEKHPRIGYLPVQTVLEGDDLETPVTVIRLVPVALAPSPSPQLSNEDTHARIEHLAS  1088

Query  970   RLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEE  1029
             RLAEME  NGS+LNDS SPNES++DEHLLIQHYCQSL+ +SP SQP+SPAQILISL+S+E
Sbjct  1089  RLAEMEFKNGSFLNDS-SPNESLEDEHLLIQHYCQSLSGESPGSQPQSPAQILISLDSQE  1265

Query  1030  RGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEA  1089
             R ELERIL DLE+ENR+LQ+EYDRL+Q+    GL  L   P  MP  P+SPRD+ELIAEA
Sbjct  1266  RSELERILRDLEDENRSLQSEYDRLRQKQGLGGLGALLLAPPTMP--PESPRDSELIAEA  1439

Query  1090  KLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTV---SSPSTSLQ  1146
             KLLRQHKGRLEARM+ILEDHN+QLESQL RLRQLL+QPQ E +VNGT       P     
Sbjct  1440  KLLRQHKGRLEARMRILEDHNRQLESQLIRLRQLLDQPQQEGRVNGTPALPSPPPPPPPP  1619

Query  1147  RSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLF  1206
               + S P+           S G    L PP+ T                   G +VG+  
Sbjct  1620  PQEESHPL-----------SNGGPGGLRPPEPT-------------------GDDVGTAV  1709

Query  1207  HMADDLGRAMESLVSVMTDEEGAE  1230
                +D    + S++    D  G E
Sbjct  1710  PTNEDTAGGLTSVLPAQQDTPGGE  1781


>ref|XM_001979487.1| Drosophila erecta GG23350 (Dere\GG23350), mRNA
Length=5085

 Score =  862 bits (2227),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 476/1081 (44%), Positives = 673/1081 (62%), Gaps = 76/1081 (7%)
 Frame = +1

Query  93    RIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYT  152
             ++ R++  WDE  + +  R  QL  ML DS ++   + E E+ L +   + E       T
Sbjct  1609  KVTRLREHWDETSQCVLQRAAQLKNMLSDSQRFEAKRLELEKWLARMEQRAERMGTIATT  1788

Query  153   VDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRS  212
              D ++ +  E K    +L Q + + D+ N+L  KL+  Y  DDT ++  +TE IN  + +
Sbjct  1789  ADILEAQQKEQKSFHAELHQNKQHFDIFNELTQKLIAVYPNDDTTRIKKMTEVINQRYAN  1968

Query  213   IHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVK  272
             ++  V  R   L      LQ F   +++FLA+L+E ET     +    +  L+       
Sbjct  1969  LNNGVINRGKQLHAAVHSLQSFDRAMDQFLAFLSETETLCENAESDIERNPLM-------  2127

Query  273   ELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKK  332
                  ++DLQ EIE H  VY  LD   +K+L SL   +DAV+LQRRLD MN +W+ L+ K
Sbjct  2128  -----FKDLQSEIETHRVVYDRLDGTGRKLLGSLTSQEDAVMLQRRLDEMNQRWNNLKSK  2292

Query  333   SLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQA--PIGGDFPAVQKQNDVHRA  390
             S+ IR+ LE++S+ W  L LSL+EL  W+  KD ELS     P+ GD  ++QKQ D H+A
Sbjct  2293  SIAIRNRLESNSEHWNALLLSLRELTEWVIRKDTELSTLGLGPVRGDAASLQKQLDDHKA  2472

Query  391   FKRELKTKEPVIMSTLETVRIFLTEQPL-----EGLEKLYQEPRELPPEERAQNVTRLLR  445
             F+R+L+ K P++ S L + R ++  +       +       + R +  EE+++ +TR +R
Sbjct  2473  FRRQLEDKRPIVESNLTSGRQYIANEAAVSDTSDTEANHDSDSRYMSAEEQSRELTRSIR  2652

Query  446   KQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGD  505
             ++  +++ +W  L   S +W+ ++DE + ++++ Q+  ++L  ++  AE  K +W P   
Sbjct  2653  REVGKLSEQWNNLIDRSDNWKHRLDEYMTKMRQFQKILEDLSSRVALAEQTKTAWLPPSS  2832

Query  506   LLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWK  565
               +    + +++++ LR ++      +   N+     T   + +    LS LEDLNTR K
Sbjct  2833  --VGEANEQMQQLQRLRDKMTTASALLDDCNEQQSFFTANQVLVPTPCLSKLEDLNTRMK  3006

Query  566   LLQVAVEDR--------VRQLHEAHRD---------FGPASQHFLSTSVQGPWERAISPN  608
             LLQ+A+++R         +Q HE   D          GP     L  SV+ PWERA +  
Sbjct  3007  LLQIAMDERQKVLCQAGAQQTHENGDDGRTTSNSGTIGPLPN--LGQSVKPPWERATTAA  3180

Query  609   KVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSA  668
              VPYYI+HE +TT WDHP+M EL + LADLN +RFSAYRTAMKLR +QK L LD +S+S 
Sbjct  3181  NVPYYIDHERETTHWDHPEMIELMKGLADLNEIRFSAYRTAMKLRSVQKRLALDRISMST  3360

Query  669   ACDALDQHNLK-QNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYD  727
             AC++ D+H L+ QND+ +DI  +   L ++Y  +++     +++ L +D+ +NW+LNVYD
Sbjct  3361  ACESFDRHGLRAQNDKLIDIPDMTTVLHSLYVTIDK-----IDLTLMLDLAINWILNVYD  3525

Query  728   TGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQ  787
             + RTG+IRVLSFK G++ LCK HLE+KYRYLF+ VA +    DQRRLGLLLHD IQ+PRQ
Sbjct  3526  SQRTGQIRVLSFKVGLVLLCKGHLEEKYRYLFRLVADTDRRADQRRLGLLLHDCIQVPRQ  3705

Query  788   LGEVASFGGSNIEPSVRSCFQFA---------NNKPEIEAALFLDWMRLEPQSMVWLPVL  838
             LGEVA+FGGSNIEPSVRSC + A         N    IE   FL W++ EPQS+VWLPVL
Sbjct  3706  LGEVAAFGGSNIEPSVRSCLEQAGISQEAIDGNQDISIELLHFLGWLQHEPQSLVWLPVL  3885

Query  839   HRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVE  898
             HR+AAAE AKHQAKCNICKE PI+GFRYR LK FN+D+CQ CFF GR AK HK+ +PM E
Sbjct  3886  HRLAAAEAAKHQAKCNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHPMHE  4065

Query  899   YCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLS--  956
             YCT TTS EDVRDF + LKNKF++++YF KHPR+GYLPVQ+VLEGD +E+PA SPQ +  
Sbjct  4066  YCTTTTSTEDVRDFTRALKNKFKSRKYFKKHPRVGYLPVQSVLEGDALESPAPSPQHTTH  4245

Query  957   --HDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQ  1014
                +D HSR+E YASRLA++E     Y     +     DDEH LI  YCQ+L   S  S 
Sbjct  4246  QLQNDMHSRLEMYASRLAQVE-----YGGTGSNSTPDSDDEHQLIAQYCQALPGTSNGSA  4410

Query  1015  PRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP-------  1067
             P+SP Q++ ++++E+R ELE I+ DLEEEN NLQAEY +L  + +    S +P       
Sbjct  4411  PKSPVQVMAAMDAEQREELEAIIRDLEEENANLQAEYQQLCSKEQ----SGMPEDSNGMQ  4578

Query  1068  -SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQ  1126
              S   M   S Q  +  +++AEAKLLRQHKGRLEARMQILEDHN+QLE+QL RLRQLL++
Sbjct  4579  HSSSSMTGLSGQGEQGQDMMAEAKLLRQHKGRLEARMQILEDHNRQLEAQLQRLRQLLDE  4758

Query  1127  P  1127
             P
Sbjct  4759  P  4761


>ref|XM_002072801.1| Drosophila willistoni GK13817 (Dwil\GK13817), mRNA
Length=5103

 Score =  853 bits (2204),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 475/1082 (43%), Positives = 673/1082 (62%), Gaps = 73/1082 (6%)
 Frame = +1

Query  93    RIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYT  152
             ++ R++  WDE  + +  R  QL  ML DS ++   + E E+ LG+   + E       T
Sbjct  1555  QVTRLREHWDETSQCVLQRAAQLKNMLSDSQRFEAKRLELEKWLGRMEQRAERMGSIATT  1734

Query  153   VDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRS  212
              D ++ +  E K    +L Q + + ++ NDL  KL+  Y  DDT ++  +TE +N  + +
Sbjct  1735  ADILEAQQKEQKSFHAELHQNKQHFELFNDLTQKLIAVYPNDDTTRIKKLTEVVNQRYAN  1914

Query  213   IHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVK  272
             ++  V  R   L      LQ F   +++FLA+L+E ET     +    +  L+       
Sbjct  1915  LNNGVVNRGKQLHAAVHSLQSFDRAMDQFLAFLSETETLCENAESDIERNPLM-------  2073

Query  273   ELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKK  332
                  ++DLQ EIE H  VY  LD   +K+L SL   +DAV+LQRRLD MN +W+ L+ K
Sbjct  2074  -----FKDLQSEIETHRVVYDRLDGTGRKLLGSLTSQEDAVMLQRRLDEMNQRWNNLKSK  2238

Query  333   SLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQA--PIGGDFPAVQKQNDVHRA  390
             S+ IR+ LE++S+ W  L LSL+EL  W+  K+ ELS     P+ GD  ++QKQ D H+A
Sbjct  2239  SIAIRNRLESNSEHWNALLLSLRELTEWVIRKETELSTLGLGPVRGDAASLQKQLDDHKA  2418

Query  391   FKRELKTKEPVIMSTLETVRIFLTEQP----LEGLEKLY-QEPRELPPEERAQNVTRLLR  445
             F+R+L+ K P++ S L + R ++  +         E  +  + R +  EE+++ +TR +R
Sbjct  2419  FRRQLEDKRPIVESNLTSGRQYIANEAAVSDTSDTEAAHDSDSRYMSAEEQSRELTRSIR  2598

Query  446   KQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGD  505
             ++  +++ +W  L   S +W+ ++DE + ++++ Q+  ++L  ++  AE  + SW  V  
Sbjct  2599  REVGKLSEQWNNLIDKSDNWKHRLDEYMTKMRQFQKILEDLSSRVALAEQTQNSW--VTP  2772

Query  506   LLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWK  565
                    D +++++ LR ++      +   N+     T   + +    LS LEDLNTR K
Sbjct  2773  SSTGEANDQMQQLQRLRDKMTTASALLDDCNEQQSFFTANQVLVPTPCLSKLEDLNTRMK  2952

Query  566   LLQVAVEDRVRQL--------HEAHRD---------FGPASQHFLSTSVQGPWERAISPN  608
             LLQ+A+++R + L        HE   D          GP     L  SV+ PWERA + +
Sbjct  2953  LLQIAMDERQKILCQAGAQHTHENGDDGRNTSNSGTIGPLPN--LGQSVKPPWERATTAS  3126

Query  609   KVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSA  668
              VPYYI+HE +TT WDHP+M EL + LADLN +RFSAYRTAMKLR +QK L LD +S++ 
Sbjct  3127  NVPYYIDHERETTHWDHPEMIELMKGLADLNEIRFSAYRTAMKLRSVQKRLALDRISMAT  3306

Query  669   ACDALDQHNLK-QNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYD  727
             AC++ D+H L+ QND+ +DI  +   L ++Y  +++     +++ L +D+ +NW+LNVYD
Sbjct  3307  ACESFDRHGLRAQNDKLIDIPDMTTVLHSLYVTIDK-----IDLTLMLDLAINWILNVYD  3471

Query  728   TGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQ  787
             + RTG+IRVLSFK G++ LC+ HLE+KYRYLF+ VA +    DQRRLGLLLHD IQ+PRQ
Sbjct  3472  SQRTGQIRVLSFKVGLVLLCRGHLEEKYRYLFRLVADTERRADQRRLGLLLHDCIQVPRQ  3651

Query  788   LGEVASFGGSNIEPSVRSCFQFA---------NNKPEIEAALFLDWMRLEPQSMVWLPVL  838
             LGEVA+FGGSNIEPSVRSC + A         N    IE   FL W++ EPQS+VWLPVL
Sbjct  3652  LGEVAAFGGSNIEPSVRSCLEQAGISQEAIDGNQDISIELQHFLGWLQHEPQSLVWLPVL  3831

Query  839   HRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVE  898
             HR+AAAE AKHQAKCNICKE PI+GFRYR LK FN+D+CQ CFF GR AK HK+ +PM E
Sbjct  3832  HRLAAAEAAKHQAKCNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHPMHE  4011

Query  899   YCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLS--  956
             YCT TTS EDVRDF + LKNKF++++YF KHPR+GYLPVQ+VLEGD +E+PA SPQ +  
Sbjct  4012  YCTTTTSTEDVRDFTRALKNKFKSRKYFKKHPRVGYLPVQSVLEGDALESPAPSPQHTTH  4191

Query  957   --HDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPL--  1012
                +D HSR+E YASRLA++E     Y     +     DDEH LI  YCQ+L  +     
Sbjct  4192  QLQNDMHSRLEMYASRLAQVE-----YGGTGSNSTPDSDDEHQLIAQYCQALPANGATNG  4356

Query  1013  -SQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRL--KQQH----EHKGLSP  1065
              S P+SP Q++ ++++E+R ELE I+ DLEEEN NLQAEY +L  KQQ     +  G   
Sbjct  4357  ASAPKSPVQVMAAMDAEQREELEAIIRDLEEENANLQAEYQQLCSKQQSGTPDDSSGGMQ  4536

Query  1066  LPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLE  1125
                   M   S Q     +++AEAKLLRQHKGRLEARMQILEDHN+QLE+QL RLRQLL+
Sbjct  4537  HSGSSSMTGLSNQGEHGQDMMAEAKLLRQHKGRLEARMQILEDHNRQLEAQLQRLRQLLD  4716

Query  1126  QP  1127
             +P
Sbjct  4717  EP  4722


>ref|XM_001996213.1| Drosophila grimshawi GH22298 (Dgri\GH22298), mRNA
Length=5103

 Score =  852 bits (2200),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 474/1099 (43%), Positives = 685/1099 (62%), Gaps = 76/1099 (6%)
 Frame = +1

Query  93    RIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYT  152
             ++ R++  WDE  + +  R  QL  ML DS ++   + E E+ L +   + E       T
Sbjct  1636  QVTRLREHWDETSQCVLQRAGQLKNMLSDSQRFEAKRLELEKWLARMEQRAERMGTIATT  1815

Query  153   VDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRS  212
              D ++ +  E K    +L Q + + ++ ++L  KL+  Y  DDT ++  +TE IN  + +
Sbjct  1816  ADILEAQQKEQKSFHAELHQNKQHFELFSELTQKLIAVYPNDDTSRIKKMTEAINQRYSN  1995

Query  213   IHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVK  272
             ++  V  R   L      LQ F   +++FLA+L+E ET     +    +  L+       
Sbjct  1996  LNNGVVNRGKQLHAAVHSLQMFDRAMDQFLAFLSETETLCENAESDIERNPLM-------  2154

Query  273   ELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKK  332
                  ++DLQ EIE H  VY  LD   +K+L SL   +DAV+LQRRLD MN +W+ L+ K
Sbjct  2155  -----FKDLQSEIETHRVVYDRLDGTGRKLLGSLTSQEDAVMLQRRLDEMNQRWNNLKSK  2319

Query  333   SLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQA--PIGGDFPAVQKQNDVHRA  390
             S+ IR+ LE++S+ W  L LSL+EL  W+  KD ELS     P+ GD  ++QKQ D H+A
Sbjct  2320  SIAIRNRLESNSEHWNALLLSLRELTEWVIRKDTELSTLGLGPVRGDAASLQKQLDDHKA  2499

Query  391   FKRELKTKEPVIMSTLETVRIFL-TEQPLEGLEKLY----QEPRELPPEERAQNVTRLLR  445
             F+R+L+ K P++ S L + R ++ +E P+            + R +  EE+++ + R +R
Sbjct  2500  FRRQLEDKRPIVESNLTSGRQYIASEAPISDTSDTEAPHDSDSRYMTAEEQSRELARSIR  2679

Query  446   KQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ-PVG  504
             ++  +++ +W  L   S +W+ ++DE + ++++ Q+  ++L  ++  AE  K +WQ P  
Sbjct  2680  REVGKLSEQWNNLIDRSDNWKHRLDEYMTKMRQFQKVLEDLSSRVALAEQTKNAWQTPTS  2859

Query  505   DLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRW  564
                +D   + +++++ LR ++      +   N+     T   + +    LS LEDLNTR 
Sbjct  2860  ---VDEANEQMQQLQRLRDKMTTASALLDDCNEQQSFFTANQVLVPTPCLSKLEDLNTRM  3030

Query  565   KLLQVAVEDRVRQLHEAHRD-----------------FGPASQHFLSTSVQGPWERAISP  607
             KLLQ+A+++R + L +A  +                  GP     L  SV+ PWERA + 
Sbjct  3031  KLLQIAMDERQKVLCQAGANHTHENGDEGRNTSNSGTIGPLPN--LGQSVKPPWERATTA  3204

Query  608   NKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLS  667
               VPYYI+HE +TT WDHP+M EL + LADLN +RFSAYRTAMKLR +Q  L LD +S++
Sbjct  3205  ANVPYYIDHERETTHWDHPEMIELMKGLADLNEIRFSAYRTAMKLRAVQTRLALDRISMA  3384

Query  668   AACDALDQHNLK-QNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVY  726
              AC++ D+H L+ QND+ +DI  +   L ++Y  +++     +++ L +D+ +NW+LNVY
Sbjct  3385  TACESFDRHGLRAQNDKLIDIPDMTTVLHSLYVTIDK-----IDLTLMLDLAINWILNVY  3549

Query  727   DTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPR  786
             D+ RTG+IRVLSFK G++ LC+ HLE+KYRYLF+ VA +    DQRRLGLLLHD IQ+PR
Sbjct  3550  DSQRTGQIRVLSFKVGLVLLCRGHLEEKYRYLFRLVADTERRADQRRLGLLLHDCIQVPR  3729

Query  787   QLGEVASFGGSNIEPSVRSCFQFA---------NNKPEIEAALFLDWMRLEPQSMVWLPV  837
             QLGEVA+FGGSNIEPSVRSC + A         N +  IE   FL W++ EPQS+VWLPV
Sbjct  3730  QLGEVAAFGGSNIEPSVRSCLEQAGISQETIDGNQEISIELQHFLGWLQHEPQSLVWLPV  3909

Query  838   LHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMV  897
             LHR+AAAE AKHQAKCNICKE PI+GFRYR LK FN+D+CQ CFF GR AK HK+ +PM 
Sbjct  3910  LHRLAAAEAAKHQAKCNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHPMH  4089

Query  898   EYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLS-  956
             EYCT TTS EDVRDF + LKNKF++++YF KHPR+GYLPVQ+VLEGD +E+PA SPQ + 
Sbjct  4090  EYCTTTTSTEDVRDFTRALKNKFKSRKYFKKHPRVGYLPVQSVLEGDALESPAPSPQHTT  4269

Query  957   ---HDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLS  1013
                  D HSR+E YASRLA++E     Y     +     DDEH LI  YCQ+L  ++  S
Sbjct  4270  HQLQSDMHSRLEMYASRLAQVE-----YGGTGSNSTPDSDDEHQLIAQYCQALPTNNG-S  4431

Query  1014  QPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRL--KQQH----EHKGLSPLP  1067
              P+SP Q++ ++++E+R ELE I+ DLEEEN NLQAEY +L  KQQ     +  G+    
Sbjct  4432  APKSPVQVMAAMDAEQREELEAIIRDLEEENSNLQAEYQQLCSKQQSGTPDDSNGMQHSS  4611

Query  1068  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
             S    + +  +  +D  ++AEAKLLRQHKGRLEARMQILEDHN+QLE+QL RLRQLL++P
Sbjct  4612  SSTAGLASQGEHGQD--MMAEAKLLRQHKGRLEARMQILEDHNRQLEAQLQRLRQLLDEP  4785

Query  1128  QAEAKVNGTTV-SSPSTSL  1145
                     + + S+P ++L
Sbjct  4786  NGGGSATSSGLPSAPGSAL  4842


>ref|XM_001999329.1| Drosophila mojavensis GI23105 (Dmoj\GI23105), mRNA
Length=5001

 Score =  849 bits (2193),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 500/1181 (42%), Positives = 712/1181 (60%), Gaps = 108/1181 (9%)
 Frame = +1

Query  94    IERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTV  153
             + R++  WDE  + +  R  QL  ML DS ++   + E E  L +   + E       T 
Sbjct  1531  VTRLREHWDETSQCVLQRAAQLKSMLSDSQRFEAKRVELEMWLARMEQRAERMGTVATTA  1710

Query  154   DAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSI  213
             D ++ +  E K    +L Q + + D+ ++L  KL+  Y  DDT +V  +TE+IN  + ++
Sbjct  1711  DILEAQQKEQKSFHAELHQNKQHFDLFSELTQKLIAVYPNDDTSRVKKMTESINQRYTNL  1890

Query  214   HKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA-NVLQDATRKERLLEDSKGVK  272
             +  V  R   L    + LQ F   +++FLA+L+E ET   N   D  R   +        
Sbjct  1891  NNGVINRGKLLHAAVQDLQSFDRKMDQFLAFLSETETLCENAESDIDRNPMM--------  2046

Query  273   ELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKK  332
                  ++DLQ EIE H  VY  LD   +K+L SL   +DAV+LQRRLD MN +W+ L+ K
Sbjct  2047  -----FKDLQSEIETHRVVYDRLDGTGRKLLGSLTSQEDAVMLQRRLDEMNQRWNNLKSK  2211

Query  333   SLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQA--PIGGDFPAVQKQNDVHRA  390
             S+ IR+ LE++S+ W  L LSL+EL  W+  KD ELS     P+ GD  ++QKQ D H+A
Sbjct  2212  SIAIRNRLESNSEHWNALLLSLRELTEWVIRKDTELSSLGLGPVRGDAASLQKQLDDHKA  2391

Query  391   FKRELKTKEPVIMSTLETVRIFL-TEQPLEGLEKLY----QEPRELPPEERAQNVTRLLR  445
             F+R+L+ K P++ S L + R ++ +E P+            + R +  EE+++ + R +R
Sbjct  2392  FRRQLEDKRPIVESNLTSGRQYIASETPVSDTSDTEAAHDSDSRYMSAEEQSRELARSIR  2571

Query  446   KQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGD  505
             ++  +++ +W  L   S +W+ ++DE + ++++ Q+  ++L  ++  AE  + +WQ    
Sbjct  2572  REVGKLSEQWNNLIDRSDNWKHRLDEYMTKMRQFQKVLEDLTSRVALAEQTQLTWQTPSS  2751

Query  506   LLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWK  565
               +    + +++++ LR ++      +   N+     T   + +    LS LEDLNTR K
Sbjct  2752  --VGEANEQMQQLQRLRDKMTTASALLDDCNEQQSFFTANQVLVPTPCLSKLEDLNTRMK  2925

Query  566   LLQVAVEDRVRQL--------HEAHRD---------FGPASQHFLSTSVQGPWERAISPN  608
             LLQ+A+++R + L        HE   D          GP     L  SV+ PWERA +  
Sbjct  2926  LLQIAMDERQKVLCQAGANNAHENGDDGRTTSNSGTIGPLPN--LGQSVKPPWERATTAA  3099

Query  609   KVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSA  668
              VPYYI+HE +TT WDHP+M EL + LADLN +RFSAYRTAMKLR +QK L LD +S++ 
Sbjct  3100  NVPYYIDHERETTHWDHPEMIELMKGLADLNEIRFSAYRTAMKLRAVQKRLALDRISMAT  3279

Query  669   ACDALDQHNLK-QNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYD  727
             AC++ D+H L+ QND+ +DI  +   L ++Y  +++     +++ L +D+ +NW+LNVYD
Sbjct  3280  ACESFDRHGLRAQNDKLIDIPDMTTVLHSLYVTIDK-----IDLTLMLDLAINWILNVYD  3444

Query  728   TGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQ  787
             + RTG+IRVLSFK G++ LCK HLE+KYRYLF+ VA +    DQRRLGLLLHD IQ+PRQ
Sbjct  3445  SQRTGQIRVLSFKVGLVLLCKGHLEEKYRYLFRLVADTDRRADQRRLGLLLHDCIQVPRQ  3624

Query  788   LGEVASFGGSNIEPSVRSCFQFA---------NNKPEIEAALFLDWMRLEPQSMVWLPVL  838
             LGEVA+FGGSNIEPSVRSC + A         N +  IE   FL W++ EPQS+VWLPVL
Sbjct  3625  LGEVAAFGGSNIEPSVRSCLEQAGISQEAIDGNQEISIELQHFLGWLQHEPQSLVWLPVL  3804

Query  839   HRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVE  898
             HR+AAAE AKHQAKCNICKE PI+GFRYR LK FN+D+CQ CFF GR AK HK+ +PM E
Sbjct  3805  HRLAAAEAAKHQAKCNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHPMHE  3984

Query  899   YCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQ-LSH  957
             YCT TTS EDVRDF + LKNKF++++YF KHPR+GYLPVQ+VLEGD +E+PA SPQ  SH
Sbjct  3985  YCTTTTSTEDVRDFTRALKNKFKSRKYFKKHPRVGYLPVQSVLEGDALESPAPSPQHTSH  4164

Query  958   ---DDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQ  1014
                +D HSR+E YASRLA++E     Y     +     DDEH LI  YCQ+L   +  S 
Sbjct  4165  QLQNDMHSRLEMYASRLAQVE-----YGGTGSNSTPDSDDEHQLIAQYCQALPATNG-SA  4326

Query  1015  PRSPAQILISLESEERGELERILADLEEENRNLQAEYDRL--KQQH----EHKGLSPLPS  1068
             P+SP Q++ ++++E+R ELE I+ DLEEEN NLQAEY +L  KQQ     E  G+    S
Sbjct  4327  PKSPVQVMAAMDAEQREELEAIIRDLEEENANLQAEYQQLCTKQQSGTPDESNGMH-HSS  4503

Query  1069  PPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQ  1128
                M   S Q     +++AEAKLLRQHKGRLEARMQILEDHN+QLE+QL RLRQLL++P 
Sbjct  4504  SSSMTGLSSQGEHGQDMMAEAKLLRQHKGRLEARMQILEDHNRQLEAQLQRLRQLLDEPN  4683

Query  1129  AEAKVNGTTV--SSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEV  1186
                    ++   S+P ++L    +S+P  L+      S                      
Sbjct  4684  GGGSSATSSGLPSAPGSAL----NSKPNTLQTRSVTAS----------------------  4785

Query  1187  MEQLNNSFPSSRGHNVGSLFHMADDLGRAMESLVSVMTDEE  1227
               QLN   P+      G   H +    +A ++LV+V+T++E
Sbjct  4786  --QLNTDSPAKMNQQNGHYDHTS----KAADNLVTVITEQE  4890


>ref|XM_002054550.1| Drosophila virilis GJ22727 (Dvir\GJ22727), mRNA
Length=4995

 Score =  848 bits (2190),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 480/1102 (43%), Positives = 681/1102 (61%), Gaps = 91/1102 (8%)
 Frame = +1

Query  93    RIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYT  152
             ++ R++  WDE  + +  R  QL  ML DS ++   + E E+ LG+   + E       T
Sbjct  1522  QVTRLREHWDETSQCVLQRAAQLKNMLSDSQRFEAKRLELEKWLGRMEQRAERMGTVATT  1701

Query  153   VDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRS  212
              D ++ +  E K    +L Q + + ++ +DL  KL+  Y  DDT ++  +TE +N  + +
Sbjct  1702  ADILEAQQKEQKSFHAELHQNKQHFELFSDLTQKLIAVYPNDDTTRIKKMTEALNQRYSN  1881

Query  213   IHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA-NVLQDATRKERLLEDSKGV  271
             ++  V  R   L      LQ F   +++FLA+L+E ET   N   D  R   +       
Sbjct  1882  LNNGVINRGKQLHAAVHSLQSFDRAMDQFLAFLSEMETLCENAESDVERNPMM-------  2040

Query  272   KELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRK  331
                   ++DLQ EIE H  VY  LD   +K+L SL   +DAV+LQ RLD MN +W+ L+ 
Sbjct  2041  ------FKDLQSEIETHRVVYDRLDGTGRKLLGSLTSQEDAVMLQHRLDEMNQRWNNLKS  2202

Query  332   KSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQA--PIGGDFPAVQKQNDVHR  389
             KS+ IR+ LE++S+ W  L LSL+EL  W+  KD ELS     P+ GD  ++QKQ D H+
Sbjct  2203  KSIAIRNRLESNSEHWHALLLSLRELTEWVIRKDTELSSLGLGPVRGDAASLQKQLDDHK  2382

Query  390   AFKRELKTKEPVIMSTLETVRIFL-TEQPLEGLEKLY----QEPRELPPEERAQNVTRLL  444
             AF+R+L+ K P++ S L + R ++ +E P+            + R +  EE+++ + R +
Sbjct  2383  AFRRQLEDKRPIVESNLTSGRQYIASEAPVSDTSDTEAAHDSDSRYMSAEEQSRELARSI  2562

Query  445   RKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ-PV  503
             R++  +++ +W  L   S +W+ ++DE + ++++ Q+  ++L  ++  AE  K +WQ P 
Sbjct  2563  RREVGKLSEQWNNLIDRSDNWKHRLDEYMTKMRQFQKVLEDLSSRVALAEQTKNAWQTPT  2742

Query  504   GDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTR  563
                 +    + +++++ LR ++      +   N+     T   + +    LS LEDLNTR
Sbjct  2743  S---VGEANEQMQQLQRLRDKMTTASALLDDCNEQQSFFTANQVLVPTPCLSKLEDLNTR  2913

Query  564   WKLLQVAVEDRVRQL--------HEAHRD---------FGPASQHFLSTSVQGPWERAIS  606
              KLLQ+A+++R + L        HE   D          GP     L  SV+ PWERA +
Sbjct  2914  MKLLQIAMDERQKVLCQAGANHTHENGDDGRNTSNSGTIGPLPN--LGQSVKPPWERATT  3087

Query  607   PNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSL  666
                VPYYI+HE +TT WDHP+M EL + LADLN +RFSAYRTAMKLR +QK L LD +S+
Sbjct  3088  AANVPYYIDHERETTHWDHPEMIELMKGLADLNEIRFSAYRTAMKLRAVQKRLALDRISM  3267

Query  667   SAACDALDQHNLK-QNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNV  725
             + AC++ D+H L+ QND+ +DI  +   L ++Y  +++     +++ L +D+ +NW+LNV
Sbjct  3268  ATACESFDRHGLRAQNDKLIDIPDMTTVLHSLYVTIDK-----IDLTLMLDLAINWILNV  3432

Query  726   YDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIP  785
             YD+ RTG+IRVLSFK G++ LC+ HLE+KYRYLF+ VA +    DQRRLGLLLHD IQ+P
Sbjct  3433  YDSQRTGQIRVLSFKVGLVLLCRGHLEEKYRYLFRLVADTERRADQRRLGLLLHDCIQVP  3612

Query  786   RQLGEVASFGGSNIEPSVRSCFQFA---------NNKPEIEAALFLDWMRLEPQSMVWLP  836
             RQLGEVA+FGGSNIEPSVRSC + A         N +  IE   FL W++ EPQS+VWLP
Sbjct  3613  RQLGEVAAFGGSNIEPSVRSCLEQAGISQEAIDGNQEISIELQHFLGWLQHEPQSLVWLP  3792

Query  837   VLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPM  896
             VLHR+AAAE A+HQAKCNICKE PI+GFRYR LK FN+D+CQ CFF GR AK HK+ +PM
Sbjct  3793  VLHRLAAAEAARHQAKCNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHPM  3972

Query  897   VEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLS  956
              EYCT TTS EDVRDF + LKNKF++++YF KHPR+GYLPVQ+VLEGD +E+PA SPQ +
Sbjct  3973  HEYCTTTTSTEDVRDFTRALKNKFKSRKYFKKHPRVGYLPVQSVLEGDALESPAPSPQHT  4152

Query  957   ----HDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPL  1012
                   D HSR+E YASRLA++E     Y     +     DDEH LI  YCQ+L  ++  
Sbjct  4153  THQLQSDMHSRLEMYASRLAQVE-----YGGTGSNSTPDSDDEHQLIAQYCQALPTNNG-  4314

Query  1013  SQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRL--KQQHEHKGLSPLPSPP  1070
             S P+SP Q++ ++++E+R ELE I+ DLEEEN NLQAEY +L  KQQ      S  P   
Sbjct  4315  SAPKSPVQVMAAMDAEQREELEAIIRDLEEENANLQAEYQQLCSKQQ------SGTPDES  4476

Query  1071  EMM--------PTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQ  1122
               M          S Q     +++AEAKLLRQHKGRLE+RMQILEDHN+QLE+QL RLRQ
Sbjct  4477  NGMQHSSSSMTGLSSQGEHGQDMMAEAKLLRQHKGRLESRMQILEDHNRQLEAQLQRLRQ  4656

Query  1123  LLEQPQAEAKVNGTTVSSPSTS  1144
             LL++P      NG   SS ++S
Sbjct  4657  LLDEP------NGGGCSSANSS  4704


>gb|AF300294.1|AF300294 Drosophila melanogaster dystrophin-like protein DLP186 mRNA, 
complete cds, alternatively spliced
Length=5153

 Score =  846 bits (2185),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 473/1081 (43%), Positives = 669/1081 (61%), Gaps = 76/1081 (7%)
 Frame = +1

Query  93    RIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYT  152
             ++ R++  WDE  + +  R  QL  ML DS ++   + E E+ L +   + E       T
Sbjct  1600  QVTRLREHWDETSQCVLQRAAQLKNMLSDSQRFEAKRLELEKWLARMEQRAERMGTIATT  1779

Query  153   VDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRS  212
              D ++ +  E K    +L Q + + D+ N+L  KL+  Y  DDT ++  +TE IN  + +
Sbjct  1780  ADILEAQQKEQKSFHAELHQNKQHFDIFNELTQKLIAVYPNDDTTRIKKMTEVINQRYAN  1959

Query  213   IHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVK  272
             ++  V  R   L      LQ F   +++FLA+L+E ET     +    +  L+       
Sbjct  1960  LNSGVINRGKQLHAAVHSLQSFDRAMDQFLAFLSETETLCENAESDIERNPLM-------  2118

Query  273   ELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKK  332
                  ++DLQ EIE H  VY+ LD   +K+L SL   +DAV+LQRRLD MN +W++LR K
Sbjct  2119  -----FKDLQSEIETHRVVYNRLDGTGRKLLGSLTSQEDAVMLQRRLDEMNQRWNDLRSK  2283

Query  333   SLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQA--PIGGDFPAVQKQNDVHRA  390
             S+ +R+ LE++S+ W  L LSL+EL  W+  KD ELS     P+  D  ++QKQ D H+A
Sbjct  2284  SIAMRNRLESNSEHWNALLLSLRELTEWVIRKDSELSTLGLGPVLTDAASLQKQLDDHKA  2463

Query  391   FKRELKTKEPVIMSTLETVRIFLTEQPL-----EGLEKLYQEPRELPPEERAQNVTRLLR  445
             F+R+L+ K P++ S L + R ++  +       +       + R +  EE+++ + R +R
Sbjct  2464  FRRQLEDKRPIVESNLTSGRQYIANEAAVSDTSDTEANHDSDSRYMSAEEQSRELRRSIR  2643

Query  446   KQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGD  505
             ++  +++ +W  L   S +W+ ++DE + ++++ Q+  ++L  ++  AE  K SW P   
Sbjct  2644  REVGKLSEQWNNLLDRSDNWKHRLDEYMTKMRQFQKILEDLSSRVALAEQTKTSWLPPSS  2823

Query  506   LLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWK  565
               +    + +++++ LR ++      +   N+     T   + +    LS LEDLNTR K
Sbjct  2824  --VGEANEQMQQLQRLRDKMTTASALLDDCNEQQSFFTANQVLVPTPCLSKLEDLNTRMK  2997

Query  566   LLQVAVEDR--------VRQLHEAHRD---------FGPASQHFLSTSVQGPWERAISPN  608
             LLQ+A+++R         +Q HE   D          GP     L  SV+ PWERA +  
Sbjct  2998  LLQIAMDERQKVLCQAGAQQTHENGDDGRTTSNSGTIGPLPN--LGQSVKPPWERATTAA  3171

Query  609   KVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSA  668
              VPYYI+HE QTT WDHP+M EL + LADLN +RFSAYRTAMKLR +QK L LD +S+S 
Sbjct  3172  NVPYYIDHERQTTHWDHPEMIELMKGLADLNEIRFSAYRTAMKLRSVQKRLALDRISMST  3351

Query  669   ACDALDQH-NLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYD  727
             AC++ D+     QND+ +DI  +   L ++Y  +++     +++ L +D+ +NW+LNVYD
Sbjct  3352  ACESFDRTWPACQNDELIDIPDMTTVLHSLYVTIDE-----IDLTLMLDLAINWILNVYD  3516

Query  728   TGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQ  787
             + RTG+IRVLSFK G++ LCK HLE+KYRYLF+ VA +    DQRRLGLLLHD IQ+PRQ
Sbjct  3517  SQRTGQIRVLSFKVGLVLLCKGHLEEKYRYLFRLVADTDRRADQRRLGLLLHDCIQVPRQ  3696

Query  788   LGEVASFGGSNIEPSVRSCFQFA---------NNKPEIEAALFLDWMRLEPQSMVWLPVL  838
             LGEVA+FGGSNIEPSVRSC + A         N    IE   FL W++ EPQS+VWLPVL
Sbjct  3697  LGEVAAFGGSNIEPSVRSCLEQAGISQEAIDGNQDISIELQHFLGWLQHEPQSLVWLPVL  3876

Query  839   HRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVE  898
             HR+AAAE AKHQAKCNICKE PI+ FRYR LK FN+D+CQ CFF GR AK HK+ +PM E
Sbjct  3877  HRLAAAEAAKHQAKCNICKEYPIVLFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHPMHE  4056

Query  899   YCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLS--  956
             YCT TTS EDVRDF + LKNKF++++YF KHPR+GYLPVQ+VLEGD +E+PA SPQ +  
Sbjct  4057  YCTTTTSTEDVRDFTRALKNKFKSRKYFKKHPRVGYLPVQSVLEGDALESPAPSPQHTTH  4236

Query  957   --HDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQ  1014
                +D HSR+E YASRLA++E     Y     +     DDEH LI  YCQ+L   S  S 
Sbjct  4237  QLQNDMHSRLEMYASRLAQVE-----YGGTGSNSTPDSDDEHQLIAQYCQALPGTSNGSA  4401

Query  1015  PRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP-------  1067
             P+SP Q++ ++++E+R ELE I+ DLEEEN NLQAEY +L  + +    S +P       
Sbjct  4402  PKSPVQVMAAMDAEQREELEAIIRDLEEENANLQAEYQQLCSKEQ----SGMPEDSNGMQ  4569

Query  1068  -SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQ  1126
              S   M   S Q  +  +++AEAKLLRQHKGRLEARMQILEDHN+QLE+QL RLRQLL++
Sbjct  4570  HSSSSMTGLSGQGEQGQDMMAEAKLLRQHKGRLEARMQILEDHNRQLEAQLQRLRQLLDE  4749

Query  1127  P  1127
             P
Sbjct  4750  P  4752


>ref|XM_002096289.1| Drosophila yakuba GE25609 (Dyak\GE25609), mRNA
Length=5403

 Score =  842 bits (2176),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 489/1161 (42%), Positives = 698/1161 (60%), Gaps = 87/1161 (7%)
 Frame = +1

Query  15    FNRAWTELTDWLSLLDQVIKSQRV-MVGDLEDINEMIIK-QKATMQDLEQRRPQLEELIT  72
             F     EL  WL+ ++Q  +++R+  +    DI E   K QK+   +L Q +   +    
Sbjct  1717  FEAKRLELEKWLARMEQ--RAERMGTIATTADILEAQQKEQKSFHAELHQNKQHFDIFNE  1890

Query  73    AAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEA  132
               Q L     N +  T I    E I  ++  +   + NR +QL+  +     +  A ++ 
Sbjct  1891  LTQKLIAVYPNDDT-TRIKKMTEVINQRYANLNNGVINRGKQLHAAVHSLQSFDRAMDQF  2067

Query  133   EQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS  192
                L +     E+ +        I++     K    +L Q + + D+ N+L  KL+  Y 
Sbjct  2068  LAFLSETETLCENAESD------IERNPLMFKSFHAELHQNKQHFDIFNELTQKLIAVYP  2229

Query  193   ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA  252
              DDT ++  +TE IN  + +++  V  R   L      LQ F   +++FLA+L+E ET  
Sbjct  2230  NDDTTRIKKMTEVINQRYANLNNGVINRGKQLHAAVHSLQSFDRAMDQFLAFLSETETLC  2409

Query  253   NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDA  312
                +    +  L+            ++DLQ EIE H  VY  LD   +K+L SL   +DA
Sbjct  2410  ENAESDIERNPLM------------FKDLQSEIETHRVVYDRLDGTGRKLLGSLTSQEDA  2553

Query  313   VLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQA  372
             V+LQRRLD MN +W+ L+ KS+ IR+ LE++S+ W  L LSL+EL  W+  KD ELS   
Sbjct  2554  VMLQRRLDEMNQRWNNLKSKSIAIRNRLESNSEHWNALLLSLRELTEWVIRKDTELSTLG  2733

Query  373   --PIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPL-----EGLEKLY  425
               P+ GD  ++QKQ D H+AF+R+L+ K P++ S L + R ++  +       +      
Sbjct  2734  LGPVRGDAASLQKQLDDHKAFRRQLEDKRPIVESNLTSGRQYIANEAAVSDTSDTEANHD  2913

Query  426   QEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDE  485
              + R +  EE+++ +TR +R++  +++ +W  L   S +W+ ++DE + ++++ Q+  ++
Sbjct  2914  SDSRYMSAEEQSRELTRSIRREVGKLSEQWNNLIDRSDNWKHRLDEYMTKMRQFQKILED  3093

Query  486   LDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTL  545
             L  ++  AE  K SW P     +    + +++++ LR ++      +   N+     T  
Sbjct  3094  LSSRVALAEQTKTSWLPPSS--VGEANEQMQQLQRLRDKMTTASALLDDCNEQQSFFTAN  3267

Query  546   GIQLSPYNLSTLEDLNTRWKLLQVAVEDR--------VRQLHEAHRD---------FGPA  588
              + +    LS LEDLNTR KLLQ+A+++R         +Q HE   D          GP 
Sbjct  3268  QVLVPTPCLSKLEDLNTRMKLLQIAMDERQKVLCQAGAQQTHENGDDGRTTSNSGTIGPL  3447

Query  589   SQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRT  648
                 L  SV+ PWERA +   VPYYI+HE +TT WDHP+M EL + LADLN +RFSAYRT
Sbjct  3448  PN--LGQSVKPPWERATTAANVPYYIDHERETTHWDHPEMIELMKGLADLNEIRFSAYRT  3621

Query  649   AMKLRRLQKALCLDLLSLSAACDALDQHNLK-QNDQPMDILQIINCLTTIYDRLEQEHNN  707
             AMKLR +QK L LD +S+S AC++ D+H L+ QND+ +DI  +   L ++Y  +++    
Sbjct  3622  AMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLIDIPDMTTVLHSLYVTIDK----  3789

Query  708   LVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTG  767
              +++ L +D+ +NW+LNVYD+ RTG+IRVLSFK G++ LCK HLE+KYRYLF+ VA +  
Sbjct  3790  -IDLTLMLDLAINWILNVYDSQRTGQIRVLSFKVGLVLLCKGHLEEKYRYLFRLVADTDR  3966

Query  768   FCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA---------NNKPEIEA  818
               DQRRLGLLLHD IQ+PRQLGEVA+FGGSNIEPSVRSC + A         N    IE 
Sbjct  3967  RADQRRLGLLLHDCIQVPRQLGEVAAFGGSNIEPSVRSCLEQAGISQEAIDGNQDISIEL  4146

Query  819   ALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQ  878
               FL W++ EPQS+VWLPVLHR+AAAE AKHQAKCNICKE PI+GFRYR LK FN+D+CQ
Sbjct  4147  QHFLGWLQHEPQSLVWLPVLHRLAAAEAAKHQAKCNICKEYPIVGFRYRCLKCFNFDMCQ  4326

Query  879   SCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQ  938
              CFF GR AK HK+ +PM EYCT TTS EDVRDF + LKNKF++++YF KHPR+GYLPVQ
Sbjct  4327  KCFFFGRNAKNHKLTHPMHEYCTTTTSTEDVRDFTRALKNKFKSRKYFKKHPRVGYLPVQ  4506

Query  939   TVLEGDNMETPASSPQLS----HDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDD  994
             +VLEGD +E+PA SPQ +     +D HSR+E YASRLA++E     Y     +     DD
Sbjct  4507  SVLEGDALESPAPSPQHTTHQLQNDMHSRLEMYASRLAQVE-----YGGTGSNSTPDSDD  4671

Query  995   EHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRL  1054
             EH LI  YCQ+L   S  S P+SP Q++ ++++E+R ELE I+ DLEEEN NLQAEY +L
Sbjct  4672  EHQLIAQYCQALPGTSNGSAPKSPVQVMAAMDAEQREELEAIIRDLEEENANLQAEYQQL  4851

Query  1055  KQQHEHKGLSPLP--------SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQIL  1106
               + +    S +P        S   M   S Q  +  +++AEAKLLRQHKGRLEARMQIL
Sbjct  4852  CSKEQ----SGMPEDSNGMQHSSSSMTGLSGQGEQGQDMMAEAKLLRQHKGRLEARMQIL  5019

Query  1107  EDHNKQLESQLHRLRQLLEQP  1127
             EDHN+QLE+QL RLRQLL++P
Sbjct  5020  EDHNRQLEAQLQRLRQLLDEP  5082


>emb|X99703.1| S.caniculua mRNA for utrophin
Length=1737

 Score =  842 bits (2174),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 406/583 (69%), Positives = 471/583 (80%), Gaps = 22/583 (3%)
 Frame = +1

Query  626   PKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPM  685
             PKM EL+ SL DLNNVRFSAYRTAMK+RRLQKALCLDLL L  A     QH L QN Q +
Sbjct  1     PKMVELFHSLGDLNNVRFSAYRTAMKIRRLQKALCLDLLELHTAQCIFAQHKLIQNVQLL  180

Query  686   DILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIIS  745
             ++ ++INCLTTIYD LEQ+H +LVNVPLCVDMCLNWLLNV+DTGR+GR+ VLS K G++ 
Sbjct  181   NVTEVINCLTTIYDGLEQKHKDLVNVPLCVDMCLNWLLNVFDTGRSGRVGVLSLKIGLMC  360

Query  746   LCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRS  805
             L K HLE+KY YLFKQVA ST  CDQR L LLLHD++QIPRQLGE+ASFGGSNIEPSVRS
Sbjct  361   LSKGHLEEKYTYLFKQVAESTDSCDQRSLSLLLHDAVQIPRQLGEIASFGGSNIEPSVRS  540

Query  806   CFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFR  865
             CFQ   NK EI+A  F++WMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI+GFR
Sbjct  541   CFQHGQNKSEIDAKQFVEWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIVGFR  720

Query  866   YRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRY  925
             YRSLKHFNYDICQSCFFSGR AKGHK+ YPMVEYCTPTTSGEDVRDF KVLKNKFR+K+Y
Sbjct  721   YRSLKHFNYDICQSCFFSGRTAKGHKLQYPMVEYCTPTTSGEDVRDFTKVLKNKFRSKKY  900

Query  926   FAKHPRMGYLPVQTVLEGDNMETPAS-------------SPQLSHDDTHSRIEHYASRLA  972
             FAKHPR+GYLPVQTVLEG+N+E P +             SPQLS DDTHSRIEHYA+RLA
Sbjct  901   FAKHPRLGYLPVQTVLEGENLEIPVTLISMWPEQYDPTQSPQLSQDDTHSRIEHYANRLA  1080

Query  973   EMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGE  1032
             +ME +NGS L DS S   S++DEH+LIQ YC +L ++SP+SQP+SP QIL S+E EER E
Sbjct  1081  QMERTNGSLLTDSSSTTGSVEDEHILIQQYCLTLGRESPISQPQSPVQILKSVEKEERSE  1260

Query  1033  LERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLL  1092
             LE I+A+LEEE RNLQAEY+RLKQQ   + + PLPSP   + ++ Q+  DAEL+AEAKLL
Sbjct  1261  LEFIIANLEEEQRNLQAEYERLKQQQILRDIKPLPSP--TLSSNQQNYHDAELLAEAKLL  1434

Query  1093  RQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQ  1152
             RQHKGRLEARMQILEDHNKQLESQL RLR+LLE+P  E+K+NG T  SP+ S Q +++ Q
Sbjct  1435  RQHKGRLEARMQILEDHNKQLESQLCRLRKLLEEPLTESKLNGVTAVSPTASFQLAENGQ  1614

Query  1153  PMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFP  1195
                     SQT      +DLL PPQDT+T L +V E++ +SFP
Sbjct  1615  -TCNEDFSSQT------DDLLIPPQDTNTDLTDVEEEIKSSFP  1722


>ref|XM_319450.4| Anopheles gambiae str. PEST AGAP010261-PA (AgaP_AGAP010261) mRNA, 
complete cds
Length=3477

 Score =  829 bits (2142),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 469/1095 (42%), Positives = 663/1095 (60%), Gaps = 96/1095 (8%)
 Frame = +1

Query  96    RIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDA  155
             R++ QW++  + +  R+ QL  ML DS ++   + E +  L +     E       T D 
Sbjct  94    RMKEQWEDTNQSVMQRKTQLTAMLGDSQRYEAKRLEIDAWLSRMETITERMGPVATTADV  273

Query  156   IQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHK  215
             +  +  E K    +L ++   +++ N L  KL+  Y  DDT ++  +TE+IN  + +++ 
Sbjct  274   LDIQQKEQKSFHAELHKFNHQIELFNQLTQKLISVYQCDDTSRIKRMTESINLRYNNLNN  453

Query  216   RVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA-NVLQDATRKERLLEDSKGVKEL  274
              +  R   L      LQ F    E+FL WL+EAE+   N   +A R    L         
Sbjct  454   SIISRGKQLHAAIHSLQTFDRTFEQFLGWLSEAESLCENTETEAERNPHCL---------  606

Query  275   MKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSL  334
                 +DLQ EI+A+  VY  LD   +K+LRSL   +DAV+LQ +LD MN +W+ L  +S 
Sbjct  607   ----KDLQSEIDANRKVYEGLDNTGRKLLRSLTSQEDAVMLQHKLDEMNQRWNHLNSRSA  774

Query  335   NIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQA--PIGGDFPAVQKQNDVHRAFK  392
              IR+ LE++SD W  L LS +EL  W+  K+ EL+      I GD  ++Q Q D H+AF+
Sbjct  775   AIRNRLESNSDHWNALLLSSRELTEWVIRKNTELTSIGFGSINGDSNSLQMQLDEHKAFR  954

Query  393   RELKTKEPVIMSTLETVRIFLT-EQPLEGLE--KLYQEPRELPPEERAQNVTRLLRKQAE  449
             R+L  K  +I + L   R +++ E PL      +   E   +  EE+ + ++R +R++  
Sbjct  955   RQLDDKRSIIENNLMNGRQYISNESPLSDASDSEAIDETMYISTEEQNRILSRSIRREVN  1134

Query  450   EVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ-PV-GDLL  507
             +++ +W  L      W+ ++DE + ++++ Q+  ++L  ++  AE I  SW  P  G   
Sbjct  1135  KLSEQWSLLIERCDKWKHRLDENITKMRQFQKILEDLSSRVASAETITHSWTTPAPGSDT  1314

Query  508   IDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL  567
              + +Q HL+++K        L ++ +   +         I  SPY L+ LED+NTR KLL
Sbjct  1315  TEEMQ-HLQRLKDKLTTANALLDDCNEQQNFFSSCRV--IVPSPY-LAKLEDINTRMKLL  1482

Query  568   QVAVEDRVRQL----------------HEAHRDF--------GPASQHFLSTSVQGPWER  603
              +AVE+R + L                HE    F        G ++   L  SVQ PWER
Sbjct  1483  HIAVEERFKVLQQSMQTTAEDGIVGSHHEEGSKFSKPLHIAPGSSTVPNLEKSVQIPWER  1662

Query  604   AISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDL  663
             A++P  VPYYINHE ++T WDHP+M EL +SLADLN VRFSAYRTA+KLR +QK L  D 
Sbjct  1663  AVTPANVPYYINHERESTHWDHPEMIELMKSLADLNEVRFSAYRTALKLRTVQKKLAFDR  1842

Query  664   LSLSAACDALDQHNLK-QNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWL  722
             L++S A +  D++ L+ QND+ +DI  +   L ++Y  LE      ++  + +D+ +NW+
Sbjct  1843  LNMSVAIEIFDRYGLRAQNDKLIDIPDMTTILNSLYTTLEP-----IDRAVMLDLAINWV  2007

Query  723   LNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSI  782
             LNVYD+ RTG+IRVLSFK G+I LC+ HLE+KYRYLF+ +A      DQR++GLLLHD I
Sbjct  2008  LNVYDSQRTGQIRVLSFKVGLILLCRGHLEEKYRYLFRLIADLEKKVDQRKMGLLLHDCI  2187

Query  783   QIPRQLGEVASFGGSNIEPSVRSCFQFANN--------KPEIEAALFLDWMRLEPQSMVW  834
             Q+PRQLGEVA+FGGSNIEPSVRSCF+ A          +  IEA  FL W++ EPQS+VW
Sbjct  2188  QVPRQLGEVAAFGGSNIEPSVRSCFELAGGVNQNGELTETAIEAQHFLSWLQHEPQSIVW  2367

Query  835   LPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHY  894
             LPVLHR+ AAETAKHQAKCNICKE PI GFRYR LK FN+D+CQ CFF+GR  K HK+ +
Sbjct  2368  LPVLHRLVAAETAKHQAKCNICKEYPIEGFRYRCLKCFNFDMCQKCFFTGRSTKNHKLSH  2547

Query  895   PMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQ  954
             PM EYCT  TS EDVRDF + L+NKF++++YF KHPR+GYLPVQ+VLEGD +E+P  SPQ
Sbjct  2548  PMHEYCTTATSTEDVRDFTRALRNKFKSRKYFKKHPRVGYLPVQSVLEGDALESPIPSPQ  2727

Query  955   LS----HDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDS  1010
                    +D HSR+E YASRLA++E    S    + +P+   DDEH LI  YCQ+L   +
Sbjct  2728  HGTHTLQNDMHSRLEMYASRLAQVECGTRS----NSTPDS--DDEHQLIAQYCQALPAAN  2889

Query  1011  PLSQ------PRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLS  1064
              +        P+SP Q++ ++E+E+R ELE ++ +LEEEN NLQAEY++LK +   K  +
Sbjct  2890  AVGTSTGSGGPKSPVQVMAAMEAEQREELETMIKELEEENANLQAEYEKLKAK---KTST  3060

Query  1065  PLPSPPEMMPTSPQSPRDA-------------ELIAEAKLLRQHKGRLEARMQILEDHNK  1111
             P+ +P E   T P S  +A             +++ EAKLLRQHKGRLEARMQILEDHNK
Sbjct  3061  PITTPDEGYKT-PTSTSNAIVSSVTTSSSGGSDMVTEAKLLRQHKGRLEARMQILEDHNK  3237

Query  1112  QLESQLHRLRQLLEQ  1126
             QLE+QL RLRQLL +
Sbjct  3238  QLEAQLQRLRQLLHE  3282


>ref|XM_002212045.1| Branchiostoma floridae hypothetical protein (BRAFLDRAFT_278584) 
mRNA, complete cds
Length=1878

 Score =  819 bits (2115),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 408/621 (65%), Positives = 483/621 (77%), Gaps = 13/621 (2%)
 Frame = +1

Query  616   HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQ  675
             H T+TT WDHPKMTEL+QSLADLN+VRFSAYRTAMKLRRLQKALCLDLLS++ A DA DQ
Sbjct  1     HTTETTSWDHPKMTELFQSLADLNDVRFSAYRTAMKLRRLQKALCLDLLSMNNAIDAFDQ  180

Query  676   HNLK-QNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             H L+ QND+ MD+++IINCLTTIYD LEQ+H NLVNVPLCVDMCLNWLLNVYDTGR+G+I
Sbjct  181   HGLRGQNDRLMDVIEIINCLTTIYDNLEQDHGNLVNVPLCVDMCLNWLLNVYDTGRSGKI  360

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFK GIISLC+AHLEDKYR+ F+ +A +TGF DQR+LGLLLHD IQ+PRQLGE+ASF
Sbjct  361   RVLSFKVGIISLCRAHLEDKYRFNFRLIAEATGFADQRKLGLLLHDLIQVPRQLGEIASF  540

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCF+ A  KPEIEAA FLDWM+ EPQSMVWLPVLHR+AAAETAKHQAKCN
Sbjct  541   GGSNIEPSVRSCFERAGGKPEIEAAHFLDWMKQEPQSMVWLPVLHRLAAAETAKHQAKCN  720

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKE PI+GFRYR L+ FN+D+CQSCF SGR AKGHK+ +PM EYCT TTSGEDVRDFAK
Sbjct  721   ICKEYPIVGFRYRCLRCFNFDMCQSCFLSGRKAKGHKLSHPMQEYCTATTSGEDVRDFAK  900

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLS-HDDTHSRIEHYASRLAE  973
             V++NKFR+K+   KHPR+GYLPVQTVLEGDN+ETP+SSPQ +   D HSR+E YASR   
Sbjct  901   VVRNKFRSKKSLKKHPRLGYLPVQTVLEGDNLETPSSSPQQAVSQDMHSRLELYASRYEN  1080

Query  974   MENSNGSYLNDSISPNESI-DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGE  1032
             +      +++  I+P     +DEH LIQ YCQSL  DS +  P+SPAQI+++++ E+R E
Sbjct  1081  LSYFIFFHVDSKIAPILFYREDEHTLIQQYCQSLGGDSGVVSPKSPAQIVVAIDQEQRAE  1260

Query  1033  LERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLL  1092
             LE ++ DLEEENRNLQ EY+RLK Q + +     PS P+  P S +  RD ELIAEAKLL
Sbjct  1261  LEAMIKDLEEENRNLQMEYERLKIQKQQQ-----PS-PQAEPRS-EVNRDNELIAEAKLL  1419

Query  1093  RQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQ--PQAEAKVNGTTVS-SPSTSLQRSD  1149
             RQHKGRLEARMQILEDHN+QLE+QL RLRQLLEQ  P     VN   +S + S ++ R  
Sbjct  1420  RQHKGRLEARMQILEDHNRQLEAQLQRLRQLLEQQSPHGSGSVNCCAMSHTLSLTIHRCS  1599

Query  1150  SSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMA  1209
                   L  VG  T       D     Q     LEEVM ++N+SFP    H  GSLF+MA
Sbjct  1600  IRLSQSLARVGRATRTPPPLRDGQRRQQTPEEQLEEVMREVNSSFPPDSNHTQGSLFNMA  1779

Query  1210  DDLGRAMESLVSVMTDEEGAE  1230
              DL +A+  LV+VMT+E+G E
Sbjct  1780  GDLNKAVGKLVTVMTNEDGTE  1842


>gb|DQ440977.1| Myxine glutinosa dystrophin mRNA, partial cds
Length=1840

 Score =  810 bits (2092),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 392/522 (75%), Positives = 453/522 (86%), Gaps = 14/522 (2%)
 Frame = +1

Query  624   DHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ  683
             DHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSL AA    ++  LKQND+
Sbjct  1     DHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLEAAAGVFEKGVLKQNDR  180

Query  684   PMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGI  743
              MD  +I++ L  +Y  +E+ H++LVNVPLCVDMCLNWLLNVYDTGR G+IR LSFKTG+
Sbjct  181   LMDTSEIVDGLNDMYQGMERRHSDLVNVPLCVDMCLNWLLNVYDTGRGGKIRELSFKTGL  360

Query  744   ISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSV  803
             + +  AHLEDKYR+LFKQVAS  GFCDQRRLGLLLHD++QIPRQLGEVASFGGSNIEPSV
Sbjct  361   VCMSNAHLEDKYRFLFKQVASPQGFCDQRRLGLLLHDAVQIPRQLGEVASFGGSNIEPSV  540

Query  804   RSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIG  863
             RSCFQFAN +PEIEA  FL+WMRLEPQSMVWLPVLHRVAA+ETAKHQAKCNICKECPI+G
Sbjct  541   RSCFQFANGRPEIEAPSFLEWMRLEPQSMVWLPVLHRVAASETAKHQAKCNICKECPIVG  720

Query  864   FRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTK  923
             FRYRSLKHFN+D+CQS FFSGR AKGH+++YPMVEYCTPTTSGED++DFAKV KNKF++K
Sbjct  721   FRYRSLKHFNHDVCQSRFFSGRTAKGHRLNYPMVEYCTPTTSGEDIKDFAKVFKNKFKSK  900

Query  924   RYFAKHPRMGYLPVQTVLEGDNMETPAS---------SP--QLSHDDTHSRIEHYASRLA  972
             +YF +HPR+GYLPVQTVLEGD++ETP +         SP  QLS++DTH+RIEH ASRLA
Sbjct  901   KYFERHPRIGYLPVQTVLEGDDLETPNTLIRLVPYEPSPTQQLSNEDTHARIEHLASRLA  1080

Query  973   EMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGE  1032
             EME  NGSYL DS SPNES++DEHLLIQHYCQSL+ +SP SQP+SPAQILISLE++ER E
Sbjct  1081  EMEFKNGSYLIDS-SPNESLEDEHLLIQHYCQSLSGESPGSQPQSPAQILISLENQERSE  1257

Query  1033  LERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLL  1092
             LERIL DLEEENR+LQ EY+RL+++ E +GL PL          P+SPRD+ELIAEAKLL
Sbjct  1258  LERILRDLEEENRSLQNEYERLRRKQEKEGLGPLLP--MPPSMPPESPRDSELIAEAKLL  1431

Query  1093  RQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVN  1134
             RQHKGRLE RMQ+LE+HN+QLESQL RLRQLL+QPQ E ++N
Sbjct  1432  RQHKGRLEGRMQVLEEHNRQLESQLCRLRQLLDQPQGEGRLN  1557


>ref|NM_001043260.1| Drosophila melanogaster dystrophin (Dys), transcript variant 
D, mRNA
Length=6600

 Score =  803 bits (2073),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 430/895 (48%), Positives = 588/895 (65%), Gaps = 64/895 (7%)
 Frame = +1

Query  279   QDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRS  338
             QDLQ EIE H  VY  LD   +K+L SL   +DAV+LQRRLD MN +W+ L+ KS+ IR+
Sbjct  2905  QDLQSEIETHRVVYDRLDGTGRKLLGSLTSQEDAVMLQRRLDEMNQRWNNLKSKSIAIRN  3084

Query  339   HLEASSDQWKRLHLSLQELLVWLQLKDDELSRQA--PIGGDFPAVQKQNDVHRAFKRELK  396
              LE++S+ W  L LSL+EL  W+  KD ELS     P+ GD  ++QKQ D H+AF+R+L+
Sbjct  3085  RLESNSEHWNALLLSLRELTEWVIRKDTELSTLGLGPVRGDAVSLQKQLDDHKAFRRQLE  3264

Query  397   TKEPVIMSTLETVRIFLTEQPL-----EGLEKLYQEPRELPPEERAQNVTRLLRKQAEEV  451
              K P++ S L + R ++  +       +       + R +  EE+++ +TR +R++  ++
Sbjct  3265  DKRPIVESNLTSGRQYIANEAAVSDTSDTEANHDSDSRYMSAEEQSRELTRSIRREVGKL  3444

Query  452   NTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSL  511
             + +W  L   S +W+ ++DE + ++++ Q+  ++L  ++  AE  K SW P     +   
Sbjct  3445  SEQWNNLIDRSDNWKHRLDEYMTKMRQFQKILEDLSSRVALAEQTKTSWLPPSS--VGEA  3618

Query  512   QDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAV  571
              + +++++ LR ++      +   N+     T   + +    LS LEDLNTR KLLQ+A+
Sbjct  3619  NEQMQQLQRLRDKMTTASALLDDCNEQQSFFTANQVLVPTPCLSKLEDLNTRMKLLQIAM  3798

Query  572   EDR--------VRQLHEAHRD---------FGPASQHFLSTSVQGPWERAISPNKVPYYI  614
             ++R         +Q HE   D          GP     L  SV+ PWERA +   VPYYI
Sbjct  3799  DERQKVLCQAGAQQTHENGDDGRTTSNSGTIGPLPN--LGQSVKPPWERATTAANVPYYI  3972

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
             +HE +TT WDHP+M EL + LADLN +RFSAYRTAMKLR +QK L LD +S+S AC++ D
Sbjct  3973  DHERETTHWDHPEMIELMKGLADLNEIRFSAYRTAMKLRSVQKRLALDRISMSTACESFD  4152

Query  675   QHNLK-QNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGR  733
             +H L+ QND+ +DI  +   L ++Y  +++     +++ L +D+ +NW+LNVYD+ RTG+
Sbjct  4153  RHGLRAQNDKLIDIPDMTTVLHSLYVTIDK-----IDLTLMLDLAINWILNVYDSQRTGQ  4317

Query  734   IRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVAS  793
             IRVLSFK G++ LCK HLE+KYRYLF+ VA +    DQRRLGLLLHD IQ+PRQLGEVA+
Sbjct  4318  IRVLSFKVGLVLLCKGHLEEKYRYLFRLVADTDRRADQRRLGLLLHDCIQVPRQLGEVAA  4497

Query  794   FGGSNIEPSVRSCFQFA---------NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAA  844
             FGGSNIEPSVRSC + A         N    IE   FL W++ EPQS+VWLPVLHR+AAA
Sbjct  4498  FGGSNIEPSVRSCLEQAGISQEAIDGNQDISIELQHFLGWLQHEPQSLVWLPVLHRLAAA  4677

Query  845   ETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTT  904
             E AKHQAKCNICKE PI+GFRYR LK FN+D+CQ CFF GR AK HK+ +PM EYCT TT
Sbjct  4678  EAAKHQAKCNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHPMHEYCTTTT  4857

Query  905   SGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLS----HDDT  960
             S EDVRDF + LKNKF++++YF KHPR+GYLPVQ+VLEGD +E+PA SPQ +     +D 
Sbjct  4858  STEDVRDFTRALKNKFKSRKYFKKHPRVGYLPVQSVLEGDALESPAPSPQHTTHQLQNDM  5037

Query  961   HSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQ  1020
             HSR+E YASRLA++E     Y     +     DDEH LI  YCQ+L   S  S P+SP Q
Sbjct  5038  HSRLEMYASRLAQVE-----YGGTGSNSTPDSDDEHQLIAQYCQALPGTSNGSAPKSPVQ  5202

Query  1021  ILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP--------SPPEM  1072
             ++ ++++E+R ELE I+ DLEEEN NLQAEY +L  + +    S +P        S   M
Sbjct  5203  VMAAMDAEQREELEAIIRDLEEENANLQAEYQQLCSKEQ----SGMPEDSNGMQHSSSSM  5370

Query  1073  MPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
                S Q  +  +++AEAKLLRQHKGRLEARMQILEDHN+QLE+QL RLRQLL++P
Sbjct  5371  TGLSGQGEQGQDMMAEAKLLRQHKGRLEARMQILEDHNRQLEAQLQRLRQLLDEP  5535


>gb|AY875639.1| Drosophila melanogaster Dp205 mRNA, complete cds
Length=5862

 Score =  802 bits (2071),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 430/895 (48%), Positives = 587/895 (65%), Gaps = 64/895 (7%)
 Frame = +1

Query  279   QDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRS  338
             QDLQ EIE H  VY  LD   +K+L SL   +DAV+LQRRLD MN +W+ L+ KS+ IR+
Sbjct  2905  QDLQSEIETHRVVYDRLDGTGRKLLGSLTSQEDAVMLQRRLDEMNQRWNNLKSKSIAIRN  3084

Query  339   HLEASSDQWKRLHLSLQELLVWLQLKDDELSRQA--PIGGDFPAVQKQNDVHRAFKRELK  396
              LE++S+ W  L LSL+EL  W+  KD ELS     P+ GD  ++QKQ D H+AF+R+L+
Sbjct  3085  RLESNSEHWNALLLSLRELTEWVIRKDTELSTLGLGPVRGDAASLQKQLDDHKAFRRQLE  3264

Query  397   TKEPVIMSTLETVRIFLTEQPL-----EGLEKLYQEPRELPPEERAQNVTRLLRKQAEEV  451
              K P++ S L + R ++  +       +       + R +  EE+++ + R +R++  ++
Sbjct  3265  DKRPIVESNLTSGRQYIANEAAVSDTSDTEANHDSDSRYMSAEEQSRELRRSIRREVGKL  3444

Query  452   NTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSL  511
             + +W  L   S +W+ ++DE + ++++ Q+  ++L  ++  AE  K SW P     +   
Sbjct  3445  SEQWNNLLDRSDNWKHRLDEYMTKMRQFQKILEDLSSRVALAEQTKTSWLPPSS--VGEA  3618

Query  512   QDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAV  571
              + +++++ LR ++      +   N+     T   + +    LS LEDLNTR KLLQ+A+
Sbjct  3619  NEQMQQLQRLRDKMTTASALLDDCNEQQSFFTANQVLVPTPCLSKLEDLNTRMKLLQIAM  3798

Query  572   EDR--------VRQLHEAHRD---------FGPASQHFLSTSVQGPWERAISPNKVPYYI  614
             ++R         +Q HE   D          GP     L  SV+ PWERA +   VPYYI
Sbjct  3799  DERQKVLCQAGAQQTHENGDDGRTTSNSGTIGPLPN--LGQSVKPPWERATTAANVPYYI  3972

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
             +HE QTT WDHP+M EL + LADLN +RFSAYRTAMKLR +QK L LD +S+S AC++ D
Sbjct  3973  DHERQTTHWDHPEMIELMKGLADLNEIRFSAYRTAMKLRSVQKRLALDRISMSTACESFD  4152

Query  675   QHNLK-QNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGR  733
             +H L+ QND+ +DI  +   L ++Y  +++     +++ L +D+ +NW+LNVYD+ RTG+
Sbjct  4153  RHGLRAQNDKLIDIPDMTTVLHSLYVTIDK-----IDLTLMLDLAINWILNVYDSQRTGQ  4317

Query  734   IRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVAS  793
             IRVLSFK G++ LCK HLE+KYRYLF+ VA +    DQRRLGLLLHD IQ+PRQLGEVA+
Sbjct  4318  IRVLSFKVGLVLLCKGHLEEKYRYLFRLVADTDRRADQRRLGLLLHDCIQVPRQLGEVAA  4497

Query  794   FGGSNIEPSVRSCFQFA---------NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAA  844
             FGGSNIEPSVRSC + A         N    IE   FL W++ EPQS+VWLPVLHR+AAA
Sbjct  4498  FGGSNIEPSVRSCLEQAGISQEAIDGNQDISIELQHFLGWLQHEPQSLVWLPVLHRLAAA  4677

Query  845   ETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTT  904
             E AKHQAKCNICKE PI+GFRYR LK FN+D+CQ CFF GR AK HK+ +PM EYCT TT
Sbjct  4678  EAAKHQAKCNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHPMHEYCTTTT  4857

Query  905   SGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLS----HDDT  960
             S EDVRDF + LKNKF++++YF KHPR+GYLPVQ+VLEGD +E+PA SPQ +     +D 
Sbjct  4858  STEDVRDFTRALKNKFKSRKYFKKHPRVGYLPVQSVLEGDALESPAPSPQHTTHQLQNDM  5037

Query  961   HSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQ  1020
             HSR+E YASRLA++E     Y     +     DDEH LI  YCQ+L   S  S P+SP Q
Sbjct  5038  HSRLEMYASRLAQVE-----YGGTGSNSTPDSDDEHQLIAQYCQALPGTSNGSAPKSPVQ  5202

Query  1021  ILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP--------SPPEM  1072
             ++ ++++E+R ELE I+ DLEEEN NLQAEY +L  + +    S +P        S   M
Sbjct  5203  VMAAMDAEQREELEAIIRDLEEENANLQAEYQQLCSKEQ----SGMPEDSNGMQHSSSSM  5370

Query  1073  MPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
                S Q  +  +++AEAKLLRQHKGRLEARMQILEDHN+QLE+QL RLRQLL++P
Sbjct  5371  TGLSGQGEQGQDMMAEAKLLRQHKGRLEARMQILEDHNRQLEAQLQRLRQLLDEP  5535


>ref|XM_001633110.1| Nematostella vectensis predicted protein (NEMVEDRAFT_v1g105253) 
partial mRNA
Length=2559

 Score =  794 bits (2050),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 406/868 (46%), Positives = 585/868 (67%), Gaps = 26/868 (2%)
 Frame = +1

Query  280   DLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSH  339
             +L+ +I  H +++ +L+EN   I+  +E  D    +Q +LD+MN +W  L  ++++IR  
Sbjct  1     NLEEDINNHQEMFASLNENGHHIMTEMEPGDTLTAVQSKLDDMNDRWQSLNVRTIDIRDR  180

Query  340   LEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKE  399
             LE ++ +W++L + LQE+L W+   D+E++ Q PIGGD  A Q QN+ H+AFK ++  + 
Sbjct  181   LEETATEWRQLLMDLQEILEWISRADEEITSQQPIGGDLEAAQNQNEQHQAFKGKVNVRR  360

Query  400   PVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLN  459
              V+   L++ R F+ +   E       +  +  P  R   V   L+ Q E V+  W  L 
Sbjct  361   LVVDRALDSGRRFMDDYRAERTA----DTEDTTPRGR---VAGNLQHQLEVVSDRWSALC  519

Query  460   LHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVK  519
               S +WQ+++DE L R Q LQ   +E+D +L +AEV +  W PV DL+I+SL + +E++K
Sbjct  520   QRSEEWQKQVDEALRRFQLLQSQMEEIDARLTEAEVARAGWTPVQDLVIESLNEQMEELK  699

Query  520   ALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLH  579
              L+  IA L+     +++    L   GI +S    + ++ L  RWK LQ+ +  R   L 
Sbjct  700   LLQDRIAALQHMFEQMSNTEGDLRRRGINISANLQNRIDQLYRRWKQLQLQMIQRQNALQ  879

Query  580   EAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLN  639
             +A+ D    S   L+ SV  PWERA++ NKVPYYINH+T+TT WDHPKMTELY  +A+LN
Sbjct  880   DAYADVDTGSIQALAASVDPPWERAVAVNKVPYYINHKTETTQWDHPKMTELYHQIAELN  1059

Query  640   NVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQ--NDQPMDILQIINCLTTI  697
             ++++SAYRTAMKLR +QKA  LDL++L+    A  QHNL +  ND  + + ++++ L T+
Sbjct  1060  DIKYSAYRTAMKLRCIQKATKLDLVTLNNLSSAFVQHNLSKARNDALIGVAEMVDTLHTV  1239

Query  698   YDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRY  757
             +D +E   +N VN  + +D+ LNWLLNVYD+GR G+IR+LSFK G++ LC+AHL+DKY Y
Sbjct  1240  FDNIEVGFDN-VNPAINIDLTLNWLLNVYDSGRVGKIRLLSFKIGLVCLCRAHLDDKYNY  1416

Query  758   LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIE  817
             LFK VA + G  D ++LGLLLHDS+Q+PRQLGE+A+FGGSNIEPSVRSCF+ A  K  I+
Sbjct  1417  LFKLVADNDGKMDHKQLGLLLHDSLQVPRQLGEIAAFGGSNIEPSVRSCFEKAREKERID  1596

Query  818   AALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDIC  877
                F+ W+  EPQS+VWLP LHR+AA+E  KH+AKC+ICKE PI+GFR+R LK FNYD+C
Sbjct  1597  PTQFVYWLSAEPQSIVWLPTLHRLAASEAVKHKAKCSICKEYPIVGFRFRCLKCFNYDLC  1776

Query  878   QSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHP-RMGYLP  936
             QSCF+SGR++  H++ +P+ +YC  TTSGEDV+DF  +++NKF+ ++Y    P ++GYLP
Sbjct  1777  QSCFWSGRISHEHRLTHPVHQYCLSTTSGEDVKDFLSMVRNKFKARKYKKNPPKKLGYLP  1956

Query  937   VQTVLEGDNMETPAS-SPQLS-HDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDD  994
             +QTV+EG N+E P S +PQ + +++ H+R+  +A+RLAE E+  G Y     SP + +D+
Sbjct  1957  IQTVMEGGNLEAPPSMTPQQNVNNEVHNRLGMFANRLAEAESDGGKY-----SP-KPMDE  2118

Query  995   EHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRN-LQAEYDR  1053
             EH LI  YCQSL     +SQPRSP QI++SL++ E+ +LE  +  LE+ENR  LQ+EY+R
Sbjct  2119  EHQLIAQYCQSLKNVCFVSQPRSPTQIVMSLDANEKDDLESEIGKLEDENRYPLQSEYER  2298

Query  1054  LKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQL  1113
             LK   +        S    + T  QS RD EL+ EAKLLRQHKGRLEARMQ+LEDHN+QL
Sbjct  2299  LKSMRDADH-----SSDGDLSTGSQS-RDTELLTEAKLLRQHKGRLEARMQVLEDHNRQL  2460

Query  1114  ESQLHRLRQLLEQPQAEAKVNGTTVSSP  1141
             E+QL RLRQLL+Q +  +    TT S P
Sbjct  2461  EAQLQRLRQLLDQVRTGSLWYHTTGSLP  2544


>gb|EU293093.1| Synthetic construct murine micro utrophin delta H2-R21 (utrn) 
gene, complete cds
Length=3495

 Score =  790 bits (2039),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 359/484 (74%), Positives = 410/484 (84%), Gaps = 0/484 (0%)
 Frame = +1

Query  467   RKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIA  526
             R+I   LE+L++LQ A D+LD  +++ E ++  W+PVGDLLIDSLQDH+EK  A R EIA
Sbjct  2038  RQIHVDLEKLRDLQGAMDDLDADMKEVEAVRNGWKPVGDLLIDSLQDHIEKTLAFREEIA  2217

Query  527   PLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFG  586
             P+   V  +NDL+ QL+ L +  S      L+DLN RWKLLQV+V+DR++QL EAHRDFG
Sbjct  2218  PINLKVKTMNDLSSQLSPLDLHPSLKMSRQLDDLNMRWKLLQVSVDDRLKQLQEAHRDFG  2397

Query  587   PASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAY  646
             P+SQHFLSTSVQ PW+R+IS NKVPYYINH+TQTTCWDHPKMTEL+QSLADLNNVRFSAY
Sbjct  2398  PSSQHFLSTSVQLPWQRSISHNKVPYYINHQTQTTCWDHPKMTELFQSLADLNNVRFSAY  2577

Query  647   RTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHN  706
             RTA+K+RRLQKALCLDLL L+   +   QH L QNDQ + +  +INCLTT YD LEQ H 
Sbjct  2578  RTAIKIRRLQKALCLDLLELNTTNEVFKQHKLNQNDQLLSVPDVINCLTTTYDGLEQLHK  2757

Query  707   NLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASST  766
             +LVNVPLCVDMCLNWLLNVYDTGRTG+IRV S K G++SL K  LE+KYR LFK+VA  T
Sbjct  2758  DLVNVPLCVDMCLNWLLNVYDTGRTGKIRVQSLKIGLMSLSKGLLEEKYRCLFKEVAGPT  2937

Query  767   GFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMR  826
               CDQR+LGLLLHD+IQIPRQLGEVA+FGGSNIEPSVRSCFQ  NNKPEI    F+DWM 
Sbjct  2938  EMCDQRQLGLLLHDAIQIPRQLGEVAAFGGSNIEPSVRSCFQQNNNKPEISVKEFIDWMH  3117

Query  827   LEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRV  886
             LEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI+GFRYRSLKHFNYD+CQSCFFSGR 
Sbjct  3118  LEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIVGFRYRSLKHFNYDVCQSCFFSGRT  3297

Query  887   AKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNM  946
             AKGHK+HYPMVEYC PTTSGEDVRDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDN+
Sbjct  3298  AKGHKLHYPMVEYCIPTTSGEDVRDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNL  3477

Query  947   ETPA  950
             ET A
Sbjct  3478  ETQA  3489


>emb|X99757.1| D.melanogaster mRNA for dystrophin
Length=2962

 Score =  788 bits (2034),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 441/946 (46%), Positives = 600/946 (63%), Gaps = 82/946 (8%)
 Frame = +1

Query  231   LQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTD  290
             LQ F   +++FLA+L+E ET     +    +  L+            ++DLQ EIE H  
Sbjct  19    LQSFDRAMDQFLAFLSETETLCENAESDIERNPLM------------FKDLQSEIETHRV  162

Query  291   VYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRL  350
             VY  LD   +K+L SL   +DAV+LQRRLD MN +W++LR KS+ +R+ LE++S+ W  L
Sbjct  163   VYDRLDGTGRKLLGSLTSQEDAVMLQRRLDEMNQRWNDLRSKSIAMRNRLESNSEHWNAL  342

Query  351   HLSLQELLVWLQLKDDELSRQA--PIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLET  408
              LSL+EL  W+  KD ELS     P+  D  ++QKQ D H+AF+R+L+ K P++ S L +
Sbjct  343   LLSLRELTEWVIRKDSELSTLGLGPVLTDAASLQKQLDDHKAFRRQLEDKRPIVESNLTS  522

Query  409   VRIFLTEQPL-----EGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSA  463
              R ++  +       +       + R +  EE+++ + R +R++  +++ +W  L   S 
Sbjct  523   GRQYIANEAAVSDTSDTEANHDSDSRYMSAEEQSRELRRSIRREVGKLSEQWNNLLDRSD  702

Query  464   DWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQP---VGDLLIDSLQDHLEKVKA  520
             +W+ ++DE L ++++ QE  ++L  ++  AE  K SW P   VG+ +             
Sbjct  703   NWKHRLDEYLTKMRQFQEILEDLSSRVALAEQTKTSWLPPSSVGEAI-----SRCNSCSR  867

Query  521   LRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDR---VRQ  577
             LR ++      +   N+     T   + +    LS LEDLNTR KLLQ+A+++R   +RQ
Sbjct  868   LRDKMTTASALLDDCNEQQSFFTANEVLVPTPCLSKLEDLNTRMKLLQIAMDERQKVLRQ  1047

Query  578   LHEAHRD--------------FGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCW  623
             +  + R                GP     L  SV+ PWERA +   VPYYI+HE QTT W
Sbjct  1048  VEPSRRTRGGDDGRTTSNSGTIGPLPN--LGQSVKPPWERATTAANVPYYIDHERQTTHW  1221

Query  624   DHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQH-NLKQND  682
             DHP+M EL + LADLN +RFSAYRTAMKLR +QK L LD +S+S AC++ D+     QND
Sbjct  1222  DHPEMIELMKGLADLNEIRFSAYRTAMKLRSVQKRLALDRISMSTACESFDRTWPACQND  1401

Query  683   QPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTG  742
             + +DI  +   L ++Y  +++     +++ L +D+ +NW+LNVYD+ RTG+IRVLSFK G
Sbjct  1402  ELIDIPDMTTVLHSLYVTIDE-----IDLTLMLDLAINWILNVYDSQRTGQIRVLSFKVG  1566

Query  743   IISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPS  802
             ++ LCK HLE+KYRYLF+ VA +    DQRRLGLLLHD IQ+PRQLGEVA+FGGSNIEPS
Sbjct  1567  LVLLCKGHLEEKYRYLFRLVADTDRRADQRRLGLLLHDCIQVPRQLGEVAAFGGSNIEPS  1746

Query  803   VRSCFQFA---------NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKC  853
             VRSC + A         N    IE   FL W++ EPQS+VWLPVLHR+AAAE AKHQAKC
Sbjct  1747  VRSCLEQAGISQEAIDGNQDISIELQHFLGWLQHEPQSLVWLPVLHRLAAAEAAKHQAKC  1926

Query  854   NICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFA  913
             NICKE PI+ FRYR LK FN+D+CQ CFF GR AK HK+ +PM EYCT TTS EDVRDF 
Sbjct  1927  NICKEYPIVLFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHPMHEYCTTTTSTEDVRDFT  2106

Query  914   KVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLS----HDDTHSRIEHYAS  969
             + LKNKF++++YF KHPR+GYLPVQ+VLEGD +E+PA SPQ +     +D HSR+E YAS
Sbjct  2107  RALKNKFKSRKYFKKHPRVGYLPVQSVLEGDALESPAPSPQHTTHQLQNDMHSRLEMYAS  2286

Query  970   RLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEE  1029
             RLA++E     Y     +     DDEH LI  YCQ+L   S  S P+SP Q++ ++++E+
Sbjct  2287  RLAQVE-----YGGTGSNSTPDSDDEHQLIAQYCQALPGTSNGSAPKSPVQVMAAMDAEQ  2451

Query  1030  RGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP--------SPPEMMPTSPQSPR  1081
             R ELE I+ DLEEEN NLQAEY    QQ   K  S +P        S   M   S Q  +
Sbjct  2452  REELEAIIRDLEEENANLQAEY----QQLCSKEQSGMPEDSNGMQHSSSSMTGLSGQGEQ  2619

Query  1082  DAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
               +++AEAKLLRQHKGRLEARMQILEDHN+QLE+QL RLRQLL++P
Sbjct  2620  GQDMMAEAKLLRQHKGRLEARMQILEDHNRQLEAQLQRLRQLLDEP  2757


>gb|DQ440979.1| Lampetra planeri dystrophin mRNA, partial cds
Length=1401

 Score =  770 bits (1988),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 359/471 (76%), Positives = 413/471 (87%), Gaps = 18/471 (3%)
 Frame = +1

Query  643   FSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLE  702
             FSAYRTAMKLRRLQKALCLDL+SL A  +  +Q  LKQND+ MD+ + + CLTTIY  LE
Sbjct  1     FSAYRTAMKLRRLQKALCLDLVSLDALTNVFEQSGLKQNDRLMDVSEAVGCLTTIYQGLE  180

Query  703   QEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQV  762
             ++H++LVN+PLCVDMCLNWLLNVYDTGR G+IR LSFKTG++SL  AHLEDKYR+LFKQV
Sbjct  181   RKHSDLVNLPLCVDMCLNWLLNVYDTGRGGKIRELSFKTGLVSLSNAHLEDKYRFLFKQV  360

Query  763   ASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFL  822
             AS  G CDQRRLGL+LHD++QIPRQLGEVASFGGSNIEPSVRSCFQFAN +PEIEA +FL
Sbjct  361   ASVAGLCDQRRLGLMLHDAVQIPRQLGEVASFGGSNIEPSVRSCFQFANGRPEIEATMFL  540

Query  823   DWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFF  882
             +WMR+EPQSMVWLPVLHRVAA+ETAKHQAKCNICKECPI+GFRYRSLKHFNYD+CQSCFF
Sbjct  541   EWMRMEPQSMVWLPVLHRVAASETAKHQAKCNICKECPIVGFRYRSLKHFNYDVCQSCFF  720

Query  883   SGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLE  942
             SGR AKGHK+ YPMVEYCTPTTSGED+RDFAKVLKNKF++K+YF KHPR+GYLPVQTVLE
Sbjct  721   SGRTAKGHKLSYPMVEYCTPTTSGEDIRDFAKVLKNKFKSKKYFEKHPRIGYLPVQTVLE  900

Query  943   GDNMETPAS-------------SPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPN  989
             GD++ETP +             SPQLS++DTH+RIEH ASRLAEME  NGS+LNDS SPN
Sbjct  901   GDDLETPVTVIRLVPVALAPSPSPQLSNEDTHARIEHLASRLAEMEFKNGSFLNDS-SPN  1077

Query  990   ESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQA  1049
             ES++DEHLLIQHYCQSL+ +SP SQP+SPAQILISL+S+ER ELERIL DLE+ENR+LQ+
Sbjct  1078  ESLEDEHLLIQHYCQSLSGESPGSQPQSPAQILISLDSQERSELERILRDLEDENRSLQS  1257

Query  1050  EYDRLKQQHEHKGLSP-LPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRL  1099
             EYDRL+Q+ E  GL   LP+PP M    P+SPRD+ELIAEAKLLRQHKGRL
Sbjct  1258  EYDRLRQKQELGGLGALLPAPPTM---PPESPRDSELIAEAKLLRQHKGRL  1401


>dbj|AK035043.1| Mus musculus 12 days embryo embryonic body between diaphragm 
region and neck cDNA, RIKEN full-length enriched library, clone:9430078L05 
product:utrophin, full insert sequence
Length=4087

 Score =  739 bits (1907),  Expect(2) = 0.0, Method: Compositional matrix adjust.
 Identities = 359/484 (74%), Positives = 405/484 (83%), Gaps = 14/484 (2%)
 Frame = +1

Query  651   KLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVN  710
             K+RRLQKALCLDLL L+   +   QH L QNDQ + +  +INCLTT YD LEQ H +LVN
Sbjct  1     KIRRLQKALCLDLLELNTTNEVFKQHKLNQNDQLLSVPDVINCLTTTYDGLEQLHKDLVN  180

Query  711   VPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCD  770
             VPLCVDMCLNWLLNVYDTGRTG+IRV S K G++SL K  LE+KYR LFK+VA  T  CD
Sbjct  181   VPLCVDMCLNWLLNVYDTGRTGKIRVQSLKIGLMSLSKGLLEEKYRCLFKEVAGPTEMCD  360

Query  771   QRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQ  830
             QR+LGLLLHD+IQIPRQLGEVA+FGGSNIEPSVRSCFQ  NNKPEI    F+DWM LEPQ
Sbjct  361   QRQLGLLLHDAIQIPRQLGEVAAFGGSNIEPSVRSCFQQNNNKPEISVKEFIDWMHLEPQ  540

Query  831   SMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGH  890
             SMVWLPVLHRVAAAETAKHQAKCNICKECPI+GFRYRSLKHFNYD+CQSCFFSGR AKGH
Sbjct  541   SMVWLPVLHRVAAAETAKHQAKCNICKECPIVGFRYRSLKHFNYDVCQSCFFSGRTAKGH  720

Query  891   KMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPA  950
             K+HYPMVEYC PTTSGEDVRDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDN+ETP 
Sbjct  721   KLHYPMVEYCIPTTSGEDVRDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNLETPI  900

Query  951   S-------------SPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHL  997
             +             SPQL HDDTHSRIE YA+RLA+ME +NGS+L DS S   S++DEH 
Sbjct  901   TLISMWPEHYDPSQSPQLFHDDTHSRIEQYATRLAQMERTNGSFLTDSSSTTGSVEDEHA  1080

Query  998   LIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQ  1057
             LIQ YCQ+L  +SP+SQP+SPAQIL S+E EERGELERI+ADLEEE RNLQ EY++LK+Q
Sbjct  1081  LIQQYCQTLGGESPVSQPQSPAQILKSVEREERGELERIIADLEEEQRNLQVEYEQLKEQ  1260

Query  1058  HEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQL  1117
             H  +GL P+ SPP+ + +   +  D+ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQL
Sbjct  1261  HLRRGL-PVGSPPDSIVSPHHTSEDSELIAEAKLLRQHKGRLEARMQILEDHNKQLESQL  1437

Query  1118  HRLR  1121
             HRLR
Sbjct  1438  HRLR  1449


 Score = 45.1 bits (105),  Expect(2) = 0.0, Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
 Frame = +2

Query  1125  EQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLE  1184
              +P +++++NG    SP  S Q S  S   L    G Q   +   EDLL+PP DTST L 
Sbjct  1460  SRPDSDSRINGV---SPWASPQHSALSY-SLDTDPGPQFHQA-ASEDLLAPPHDTSTDLT  1624

Query  1185  EVMEQLNNSFPS  1196
             +VMEQ+N++FPS
Sbjct  1625  DVMEQINSTFPS  1660


>ref|XM_962494.2| PREDICTED: Tribolium castaneum similar to dystrophin major muscle 
(LOC655939), mRNA
Length=2915

 Score =  758 bits (1958),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 431/1016 (42%), Positives = 611/1016 (60%), Gaps = 93/1016 (9%)
 Frame = +3

Query  115   LNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQ  174
             L  M K    +   + E E  L +  A+L S     +T D ++ ++ E K L  +L Q++
Sbjct  36    LATMQKKEESFEHKRLELEAWLQRMEARLASMAAVGHTADVLEVQLREQKGLHAELHQFK  215

Query  175   TNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQF  234
               ++  N L  +L+  +  +DT +     E IN  +  +   V  R   L      LQ  
Sbjct  216   AQIEAFNQLTQRLITAHQHEDTSRYKKTAEYINQHYIRLDACVINRGKLLHSALSSLQNL  395

Query  235   PLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHN  294
                L+KFLAWL+EAE+    L+      R             Q ++LQ ++E     +  
Sbjct  396   DRSLDKFLAWLSEAESVVETLEGDAESRRA----------AHQLKELQADVERQAPAHAA  545

Query  295   LDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSL  354
             L  ++  +L ++   +DA++LQ + D M  +W  L+ ++ ++R+ LE ++D W  L LSL
Sbjct  546   LRSSNLALLGTM-APEDALMLQLKGDEMERRWQALKTRTSDLRNRLEHNADYWNALLLSL  722

Query  355   QELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLT  414
             +EL  W+  KD EL   A          +Q+D HRAF+++L+ K P++ ++L + R F+ 
Sbjct  723   RELTEWVIRKDTELGLAA----------RQDD-HRAFRQQLEDKRPLVEASLRSARQFVA  869

Query  415   EQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLE  474
               P                   +  + R LR++  +++ +W  L   S     + ++   
Sbjct  870   GDP-------------------SGELARNLRRELVKLSDKWNALIDKSDQLAARFEQNTI  992

Query  475   RLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSH  534
             +L++L    +E    + + E    SW   G       ++ L  ++ L  ++  L+ ++  
Sbjct  993   KLKQLTLNLEEASAAVSRLERATLSWS--GPRSAAEARELLASLRNLETQLPQLQRSLEE  1166

Query  535   VNDLARQLTTLGIQLSPYNLST-LEDLNTRWKLLQVAVEDRVRQLHEAHR-DFGPASQHF  592
                   Q  +LG  L P NL+T LED + R + LQ A+ +R  QL    + +  P     
Sbjct  1167  ARI---QAASLGNAL-PNNLATQLEDCSARCRALQAAIRERREQLTSTTQGEISPGP---  1325

Query  593   LSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKL  652
               +SVQ PWER+ +PNKVPYYINH T+TT WDHP+M EL  SL  LN VRFSAYRTA+KL
Sbjct  1326  --SSVQPPWERSTTPNKVPYYINHSTETTHWDHPQMLELATSLLQLNEVRFSAYRTALKL  1499

Query  653   RRLQKALCLDLLSLSAACDALDQHNLK-QNDQPMDILQIINCLTTIYDRLEQEHNNLVNV  711
             R +QK LCLDL+S++ A +A D H L+ QND+ +D+  +I  L  IY         LV+V
Sbjct  1500  RAIQKKLCLDLVSINGASEAFDLHGLRGQNDKLLDVADMILVLRAIYATAASLQPALVDV  1679

Query  712   PLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQ  771
             PLCVD+ LNWLLNVYD+ RTG++RVLSFK G+  L K HLEDKYRYLF+ +A      DQ
Sbjct  1680  PLCVDLALNWLLNVYDSQRTGQLRVLSFKVGLTLLSKGHLEDKYRYLFRLIADPQQKADQ  1859

Query  772   RRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQS  831
             R+LGLLLHD +Q+PRQLGEVA+FGGSNIEPSVRSC      + ++E   FL W++ EPQS
Sbjct  1860  RKLGLLLHDVLQVPRQLGEVAAFGGSNIEPSVRSCL---GEREDLEVTHFLAWLKQEPQS  2030

Query  832   MVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHK  891
             +VWLPVLHR+AAAETAKHQAKCN CK+ PI+G RYR LK FN+D+CQSCFF+GR+ KGHK
Sbjct  2031  LVWLPVLHRLAAAETAKHQAKCNSCKQYPIVGLRYRCLKCFNFDMCQSCFFAGRLTKGHK  2210

Query  892   MHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPAS  951
             + +PM EYC  TTS ED+RDF K LKNKF++KRYF KHPR+GYLPV++VLEGD +E+P +
Sbjct  2211  LSHPMHEYCAATTSVEDMRDFTKALKNKFKSKRYFTKHPRVGYLPVRSVLEGDELESPVA  2390

Query  952   SPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSP  1011
             SPQ  H+D HSR+E YASRLAE+E         + SP    +DEH LI  YCQ++     
Sbjct  2391  SPQ--HNDMHSRLEIYASRLAEVELR-------AASP----EDEHRLIADYCQTIE----  2519

Query  1012  LSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPE  1071
                P SP Q+++ ++ E+R EL+ ++ +LE EN  L+ EY++L+     +G +P P  P+
Sbjct  2520  --GPGSPGQLMLVIDEEQRAELQEMITELEAENAALRQEYEQLQ-----RGATPHPPQPQ  2678

Query  1072  MMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
                         +++AEA+LLRQHKGRLEARMQILEDHN+QLE+QL RLRQLL++P
Sbjct  2679  H-----------DVLAEARLLRQHKGRLEARMQILEDHNRQLEAQLQRLRQLLDEP  2813


>emb|X99701.1| X.laevis mRNA for utrophin
Length=1482

 Score =  745 bits (1923),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 356/494 (72%), Positives = 411/494 (83%), Gaps = 13/494 (2%)
 Frame = +1

Query  626   PKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPM  685
             PKMTEL+QSL DLNNVRFSAYRTAMK+RRLQKALCLDLL L+       QH L QN+Q +
Sbjct  1     PKMTELFQSLGDLNNVRFSAYRTAMKIRRLQKALCLDLLDLTTTHSVFKQHELNQNNQLL  180

Query  686   DILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIIS  745
              + ++IN LTTIYD LEQ+H  LVNVPLCV+MCLNWLLNVYDTGRTG++RVLS K G++ 
Sbjct  181   SVPEVINVLTTIYDGLEQKHKELVNVPLCVEMCLNWLLNVYDTGRTGKLRVLSLKIGLMC  360

Query  746   LCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRS  805
             L K  LE+KYR+LFK+V  +   CDQR+L L+LHD+IQIPRQLGEVA+FGGSNIEPSVRS
Sbjct  361   LSKGLLEEKYRHLFKEVCGAGDTCDQRQLSLMLHDAIQIPRQLGEVAAFGGSNIEPSVRS  540

Query  806   CFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFR  865
             CFQ A NKPEI+   F++WMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI+GFR
Sbjct  541   CFQHAQNKPEIDVNHFIEWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIVGFR  720

Query  866   YRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRY  925
             YRSLKHFNYD+CQSCFFSGR AKGHK+H+PMVEYCTPTTSGEDVRDFAKVLKNKFR+K+Y
Sbjct  721   YRSLKHFNYDVCQSCFFSGRTAKGHKLHHPMVEYCTPTTSGEDVRDFAKVLKNKFRSKKY  900

Query  926   FAKHPRMGYLPVQTVLEGDNMETPAS-------------SPQLSHDDTHSRIEHYASRLA  972
             F KHPR+GYLPVQTVLEGDNMETP +             SP+L HDDTHSRIE YASRLA
Sbjct  901   FDKHPRLGYLPVQTVLEGDNMETPITLISMWPDQFDGMHSPELLHDDTHSRIEQYASRLA  1080

Query  973   EMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGE  1032
             +ME +NGS   D+ S   S++DEH LIQ +C +L  DSP+ QP+SPAQIL S+E EERGE
Sbjct  1081  QMERTNGSLFTDNSSATGSMEDEHALIQQFCHTLGGDSPIGQPQSPAQILKSVEKEERGE  1260

Query  1033  LERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLL  1092
             L+RI+ADLEEE RNL+ EY++LK QH  +GL+P  SPP+ + +   +  DAELIAEAKLL
Sbjct  1261  LDRIIADLEEEQRNLKVEYEQLKAQHLRRGLTPPSSPPDSVISLQHASEDAELIAEAKLL  1440

Query  1093  RQHKGRLEARMQIL  1106
             RQHKGRLEARMQIL
Sbjct  1441  RQHKGRLEARMQIL  1482


>ref|NM_001005246.1| Rattus norvegicus dystrophin, muscular dystrophy (Dmd), transcript 
variant Dp71c, mRNA
Length=2038

 Score =  731 bits (1888),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 356/446 (79%), Positives = 375/446 (84%), Gaps = 39/446 (8%)
 Frame = +1

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
              HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  109   GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  288

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI
Sbjct  289   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  468

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  469   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  648

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  649   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  828

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK
Sbjct  829   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  1008

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  974
             VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET   + Q  +D    + EH        
Sbjct  1009  VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET---NLQAEYDRLKQQHEHKG------  1161

Query  975   ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSP--AQIL--ISLESEER  1030
                    L+   SP E +                    + P+SP  A+++    L  + +
Sbjct  1162  -------LSPLPSPPEMMP-------------------TSPQSPRDAELIAEAKLLRQHK  1263

Query  1031  GELERILADLEEENRNLQAEYDRLKQ  1056
             G LE  +  LE+ N+ L+++  RL+Q
Sbjct  1264  GRLEARMQILEDHNKQLESQLHRLRQ  1341


 Score =  311 bits (798),  Expect(2) = 3e-95, Method: Compositional matrix adjust.
 Identities = 154/157 (98%), Positives = 155/157 (98%), Gaps = 0/157 (0%)
 Frame = +1

Query  1046  NLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQI  1105
             NLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQI
Sbjct  1111  NLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQI  1290

Query  1106  LEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSD  1165
             LEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTS+
Sbjct  1291  LEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSE  1470

Query  1166  SMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
             SMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG N 
Sbjct  1471  SMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGRNA  1581


 Score = 67.8 bits (164),  Expect(2) = 3e-95, Method: Composition-based stats.
 Identities = 32/35 (91%), Positives = 33/35 (94%), Gaps = 0/35 (0%)
 Frame = +3

Query  1196  SSRGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             + RGHNVGSLFHMADDLGRAMESLVSVM DEEGAE
Sbjct  1593  NERGHNVGSLFHMADDLGRAMESLVSVMIDEEGAE  1697


>dbj|AK299936.1| Homo sapiens cDNA FLJ60143 complete cds, highly similar to Homo 
sapiens dystrophin, transcript variant Dp140bc, mRNA
Length=1858

 Score =  731 bits (1887),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 356/446 (79%), Positives = 375/446 (84%), Gaps = 39/446 (8%)
 Frame = +1

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
              HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  139   GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  318

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI
Sbjct  319   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  498

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  499   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  678

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  679   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  858

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK
Sbjct  859   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  1038

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  974
             VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET   + Q  +D    + EH        
Sbjct  1039  VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET---NLQAEYDRLKQQHEHKG------  1191

Query  975   ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSP--AQIL--ISLESEER  1030
                    L+   SP E +                    + P+SP  A+++    L  + +
Sbjct  1192  -------LSPLPSPPEMMP-------------------TSPQSPRDAELIAEAKLLRQHK  1293

Query  1031  GELERILADLEEENRNLQAEYDRLKQ  1056
             G LE  +  LE+ N+ L+++  RL+Q
Sbjct  1294  GRLEARMQILEDHNKQLESQLHRLRQ  1371


 Score =  375 bits (962),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 188/193 (97%), Positives = 189/193 (97%), Gaps = 2/193 (1%)
 Frame = +1

Query  1040  LEEEN--RNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKG  1097
             LE +N   NLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKG
Sbjct  1117  LEGDNMETNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKG  1296

Query  1098  RLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLR  1157
             RLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLR
Sbjct  1297  RLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLR  1476

Query  1158  VVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGRAME  1217
             VVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGRAME
Sbjct  1477  VVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGRAME  1656

Query  1218  SLVSVMTDEEGAE  1230
             SLVSVMTDEEGAE
Sbjct  1657  SLVSVMTDEEGAE  1695


>gb|AY326949.1| Rattus norvegicus dystrophin Dp71c (Dmd) mRNA, complete cds; 
alternatively spliced
Length=1567

 Score =  729 bits (1883),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 355/446 (79%), Positives = 374/446 (83%), Gaps = 39/446 (8%)
 Frame = +1

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
              HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  46    GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  225

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI
Sbjct  226   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  405

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  406   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  585

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANN PEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  586   GGSNIEPSVRSCFQFANNNPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  765

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK
Sbjct  766   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  945

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEM  974
             VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET   + Q  +D    + EH        
Sbjct  946   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET---NLQAEYDRLKQQHEHKG------  1098

Query  975   ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSP--AQIL--ISLESEER  1030
                    L+   SP E +                    + P+SP  A+++    L  + +
Sbjct  1099  -------LSPLPSPPEMMP-------------------TSPQSPRDAELIAEAKLLRQHK  1200

Query  1031  GELERILADLEEENRNLQAEYDRLKQ  1056
             G LE  +  LE+ N+ L+++  RL+Q
Sbjct  1201  GRLEARMQILEDHNKQLESQLHRLRQ  1278


 Score =  312 bits (799),  Expect(2) = 2e-83, Method: Compositional matrix adjust.
 Identities = 154/157 (98%), Positives = 155/157 (98%), Gaps = 0/157 (0%)
 Frame = +1

Query  1046  NLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQI  1105
             NLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQI
Sbjct  1048  NLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQI  1227

Query  1106  LEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSD  1165
             LEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTS+
Sbjct  1228  LEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSE  1407

Query  1166  SMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
             SMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG N 
Sbjct  1408  SMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGRNA  1518


 Score = 27.7 bits (60),  Expect(2) = 2e-83, Method: Composition-based stats.
 Identities = 10/12 (83%), Positives = 11/12 (91%), Gaps = 0/12 (0%)
 Frame = +3

Query  1196  SSRGHNVGSLFH  1207
             + RGHNVGSLFH
Sbjct  1530  NERGHNVGSLFH  1565


>dbj|AK087829.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length 
enriched library, clone:E330026B12 product:dystrophin, 
muscular dystrophy, full insert sequence
Length=1298

 Score =  724 bits (1869),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 333/334 (99%), Positives = 333/334 (99%), Gaps = 0/334 (0%)
 Frame = +3

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
              HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  138   GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  317

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI
Sbjct  318   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  497

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  498   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  677

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  678   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  857

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK
Sbjct  858   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  1037

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET  948
             VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET
Sbjct  1038  VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET  1139


>dbj|AK075809.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length 
enriched library, clone:1810074E05 product:dystrophin, muscular 
dystrophy, full insert sequence
Length=1384

 Score =  724 bits (1869),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 333/334 (99%), Positives = 333/334 (99%), Gaps = 0/334 (0%)
 Frame = +3

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
              HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  138   GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  317

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI
Sbjct  318   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  497

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  498   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  677

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  678   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  857

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK
Sbjct  858   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  1037

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET  948
             VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET
Sbjct  1038  VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET  1139


>ref|NM_004019.2| Homo sapiens dystrophin (DMD), transcript variant Dp40, mRNA
Length=1571

 Score =  723 bits (1867),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 333/334 (99%), Positives = 333/334 (99%), Gaps = 0/334 (0%)
 Frame = +1

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
              HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  97    GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  276

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI
Sbjct  277   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  456

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  457   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  636

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  637   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  816

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK
Sbjct  817   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  996

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET  948
             VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET
Sbjct  997   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET  1098


>emb|X69767.1| R.norvegicus mRNA for APO-dystrophin-3
Length=1240

 Score =  719 bits (1856),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 331/334 (99%), Positives = 332/334 (99%), Gaps = 0/334 (0%)
 Frame = +1

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
              HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  124   GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  303

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQNDQPMDILQII CLTTIYDRLEQEHNNLVNVPLCVD+CLNWLLNVYDTGRTGRI
Sbjct  304   QHNLKQNDQPMDILQIIYCLTTIYDRLEQEHNNLVNVPLCVDVCLNWLLNVYDTGRTGRI  483

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  484   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  663

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  664   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  843

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK
Sbjct  844   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  1023

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET  948
             VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET
Sbjct  1024  VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET  1125


>ref|XM_694837.3| PREDICTED: Danio rerio similar to putative utrophin (LOC571265), 
mRNA
Length=3112

 Score =  711 bits (1836),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 397/746 (53%), Positives = 486/746 (65%), Gaps = 111/746 (14%)
 Frame = +1

Query  430   ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLK  489
             EL PEE+AQ V + +RKQ  EV   W++L  H+  WQ +++  L++LQ+LQ + D+LDL+
Sbjct  43    ELTPEEKAQRVAKAIRKQTAEVCERWDRLTGHAGTWQEQVERALDKLQDLQSSMDQLDLR  222

Query  490   LRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQL  549
             L QAE +K  WQPVGDLLIDSLQDH++K  A R E++PLK++V  VNDLA QLT L +QL
Sbjct  223   LAQAEELKAGWQPVGDLLIDSLQDHIDKTTAFREEVSPLKKDVGAVNDLAAQLTPLDVQL  402

Query  550   SPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNK  609
             S      L++LN RWKLLQ+      R+                      P  R   P  
Sbjct  403   SSTTNRQLDNLNMRWKLLQLQCSCPGRE----------------------PCPRIKCP--  510

Query  610   VPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAA  669
                       TT  D          L DL   +    +  + +   Q ++   +  L++ 
Sbjct  511   ----------TTSMD----------LLDLGVAQSMFQQHKLTVNSQQLSVPEIINCLTSV  630

Query  670   CDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTG  729
              D L+Q +    + P+ +   +N L  +YD                            TG
Sbjct  631   YDGLEQEHKDLVNVPLCVDMSLNWLLNVYD----------------------------TG  726

Query  730   RTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLG  789
             R+G+IRVLS K G++SLCK HLE+KY+ LF QVAS+ G CDQR+LGLLLHD+IQIPRQLG
Sbjct  727   RSGKIRVLSMKIGLLSLCKGHLEEKYKCLFNQVASAGGTCDQRQLGLLLHDAIQIPRQLG  906

Query  790   EVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKH  849
             EVA+FGGSNIEPSVRSCFQ   NK E+E   F+DWMRLEPQSMVWLPVLHRVAAAETAKH
Sbjct  907   EVAAFGGSNIEPSVRSCFQHVTNKVELEPRQFIDWMRLEPQSMVWLPVLHRVAAAETAKH  1086

Query  850   QAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDV  909
             QAKCNICKE PI+GFRYRSLKHFNYD+CQSCFFSGR AKGHK++YPMVEYCTPTTSGED+
Sbjct  1087  QAKCNICKEFPIVGFRYRSLKHFNYDVCQSCFFSGRTAKGHKLNYPMVEYCTPTTSGEDM  1266

Query  910   RDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYAS  969
             RDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDNMET   SPQL HDDTHSRI  YA+
Sbjct  1267  RDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNMETLCPSPQLPHDDTHSRIGEYAN  1446

Query  970   RLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSL-NQDSPLSQP-------------  1015
             RLA+ME SNGS   DS S   S+D+EH LI  YCQ+L  + S  SQP             
Sbjct  1447  RLAQMERSNGSLPTDSSSATGSMDEEHALILQYCQTLGGEGSSFSQPQSPAHINRTPAHN  1626

Query  1016  --------RSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLP  1067
                     +SPAQIL ++E EERGELERI+A LE++ R LQ EY+ L+ Q+         
Sbjct  1627  THSPSYLLQSPAQILQAVEREERGELERIIARLEDDQRVLQREYEELRFQYGQP------  1788

Query  1068  SPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
                     +  +P +A+L+AEAKLLRQHKGRLEARMQILEDHNKQLESQL+RLRQLL QP
Sbjct  1789  ----GAAAASGAPDEADLLAEAKLLRQHKGRLEARMQILEDHNKQLESQLYRLRQLLHQP  1956

Query  1128  QAEAKVNGTTVSSPSTSLQRSDSSQP  1153
             +    +NGT   S S+SL +  + QP
Sbjct  1957  E----LNGT---SSSSSLHQDAAGQP  2013


>gb|AF339032.1|AF339032 Danio rerio dystrophin variant Dp71 (dmd) mRNA, partial cds, 
alternatively spliced
Length=1195

 Score =  689 bits (1778),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 313/356 (87%), Positives = 336/356 (94%), Gaps = 13/356 (3%)
 Frame = +3

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
             NH+TQTTCWDHPKM ELYQSLADLNNVRFSAYRTAMKLRR+QKALCLDLLS+ AAC+A +
Sbjct  126   NHQTQTTCWDHPKMAELYQSLADLNNVRFSAYRTAMKLRRMQKALCLDLLSMPAACEAFE  305

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQN+Q MDI+Q+INCLT+IYDRLEQ+H++LVNVPLCVDMCLNWLLNVYDTGR G+I
Sbjct  306   QHNLKQNEQFMDIVQVINCLTSIYDRLEQQHSSLVNVPLCVDMCLNWLLNVYDTGRAGKI  485

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             R LSFKTGIISLCKAHLEDKYR+LF++VAS+TGFCDQRRLGLLLHD+IQIPRQLGEVASF
Sbjct  486   RTLSFKTGIISLCKAHLEDKYRFLFREVASATGFCDQRRLGLLLHDAIQIPRQLGEVASF  665

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANNKPE+EA++FLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  666   GGSNIEPSVRSCFQFANNKPELEASVFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  845

Query  855   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK  914
             ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKM YPMVEYCTPTTSGEDVRDFAK
Sbjct  846   ICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMQYPMVEYCTPTTSGEDVRDFAK  1025

Query  915   VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET-------------PASSPQLSH  957
             VLKNKFRTKRYF+KHPRMGYLPVQT+LEGDNMET             PASSPQLSH
Sbjct  1026  VLKNKFRTKRYFSKHPRMGYLPVQTILEGDNMETPVTLINFWPVDHPPASSPQLSH  1193


>emb|X15488.1| Human mRNA fragment for dystrophin-related protein
Length=1470

 Score =  689 bits (1777),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 345/483 (71%), Positives = 395/483 (81%), Gaps = 18/483 (3%)
 Frame = +1

Query  727   DTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPR  786
             DTGRTG+IRV S K G++SL K  LE+KYRYLFK+VA  T  CDQR+LGLLLHD+IQIPR
Sbjct  1     DTGRTGKIRVQSLKIGLMSLSKGLLEEKYRYLFKEVAGPTEMCDQRQLGLLLHDAIQIPR  180

Query  787   QLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAET  846
             QLGEVA+FGGSNIEPSVRSCFQ  NNKPEI    F+DWM LEPQSMVWLPVLHRVAAAET
Sbjct  181   QLGEVAAFGGSNIEPSVRSCFQQNNNKPEISVKEFIDWMHLEPQSMVWLPVLHRVAAAET  360

Query  847   AKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSG  906
             AKHQAKCNICKECPI+GFRYRSLKHFNYD+CQSCFFSGR AKGHK+HYPMVEYC PTTSG
Sbjct  361   AKHQAKCNICKECPIVGFRYRSLKHFNYDVCQSCFFSGRTAKGHKLHYPMVEYCIPTTSG  540

Query  907   EDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET-------------PASSP  953
             EDVRDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDN+ET             P+ SP
Sbjct  541   EDVRDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNLETPITLISMWPEHYDPSQSP  720

Query  954   QLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLS  1013
             QL HDDTHSRIE YA+RLA+ME +NGS+L DS S   S++DEH LIQ YCQ+L  +SP+S
Sbjct  721   QLFHDDTHSRIEQYATRLAQMERTNGSFLTDSSSTTGSVEDEHALIQQYCQTLGGESPVS  900

Query  1014  QPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMM  1073
             QP+SPAQIL S+E EERGELERI+ADLEEE RNLQ EY++LK QH  +GL P+ SPPE +
Sbjct  901   QPQSPAQILKSVEREERGELERIIADLEEEQRNLQVEYEQLKDQHLRRGL-PVGSPPESI  1077

Query  1074  PTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKV  1133
              +   +  D+ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP++++++
Sbjct  1078  ISPHHTSEDSELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPESDSRI  1257

Query  1134  NGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNS  1193
             NG    SP  S Q S  S  +     G Q   + G EDLL+PP DTST L EVMEQ++++
Sbjct  1258  NGV---SPWASPQHSALSYSLDPDASGPQFHQAAG-EDLLAPPHDTSTDLTEVMEQIHST  1425

Query  1194  FPS  1196
             FPS
Sbjct  1426  FPS  1434


>dbj|AB209305.1| Homo sapiens mRNA for dystrophin related protein 2 variant protein
Length=5714

 Score =  683 bits (1762),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 344/581 (59%), Positives = 445/581 (76%), Gaps = 16/581 (2%)
 Frame = +2

Query  625   HPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQP  684
             HPKMTELYQ+LADLNN++FSAYRTAMKLRR+QKAL LDL++L+ A +  ++H+L+ ++  
Sbjct  110   HPKMTELYQTLADLNNIKFSAYRTAMKLRRVQKALRLDLVTLTTALEIFNEHDLQASEHV  289

Query  685   MDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGII  744
             MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LNWLLNV+D+GR+G++R LSFKTGI 
Sbjct  290   MDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLNWLLNVFDSGRSGKMRALSFKTGIA  469

Query  745   SLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVR  804
              LC   +++K +YLF QVA+S   CDQR LG+LLH++IQ+PRQLGEVA+FGGSN+EPSVR
Sbjct  470   CLCGTEVKEKLQYLFSQVANSGSQCDQRHLGVLLHEAIQVPRQLGEVAAFGGSNVEPSVR  649

Query  805   SCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGF  864
             SCF+F+  KP IEA+ FL+W+ LEPQSMVWL VLHRV  AE  KHQ KC+IC++CPI GF
Sbjct  650   SCFRFSTGKPVIEASQFLEWVNLEPQSMVWLAVLHRVTIAEQVKHQTKCSICRQCPIKGF  829

Query  865   RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKR  924
             RYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TPTTS E++RDFA  LKNKFR+K 
Sbjct  830   RYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPTTSSENMRDFATTLKNKFRSKH  1009

Query  925   YFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLND  984
             YF+KHP+ GYLPVQ+VLE D  ETPASSP   H DTHSRIEH+ASRLAEME+ N S+ ND
Sbjct  1010  YFSKHPQRGYLPVQSVLEADYSETPASSPMWPHADTHSRIEHFASRLAEMESQNCSFFND  1189

Query  985   SISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPA---QILISLESEERGELERILADLE  1041
             S+SP++SID++  L++H        SP++  R PA   Q   S+ +E +GEL++ILA LE
Sbjct  1190  SLSPDDSIDEDQYLLRH-------SSPITD-REPAFGQQAPCSVATESKGELQKILAHLE  1345

Query  1042  EENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEA  1101
             +ENR LQ E  RLK QHE    +  PS  +    +    R+ EL+AEA++LRQHK RLE 
Sbjct  1346  DENRILQGELRRLKWQHEEAAEA--PSLADGSTEAATDHRNEELLAEARILRQHKSRLET  1519

Query  1102  RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGS  1161
             RMQILEDHNKQLESQL RLR+LL QP  E+  +G+  SS ++S Q+S+ S P   R  G 
Sbjct  1520  RMQILEDHNKQLESQLQRLRELLLQPPTESDGSGSAGSSLASSPQQSEGSHP---REKGQ  1690

Query  1162  QTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
              T D+   +D+ S  QD S  LE++ME+L ++FPS R  +V
Sbjct  1691  TTPDTEAADDVGSKSQDVSLCLEDIMEKLRHAFPSVRSSDV  1813


>emb|X99736.1| B.lanceolatum mRNA for dystrophin-like protein
Length=1338

 Score =  669 bits (1727),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 334/476 (70%), Positives = 389/476 (81%), Gaps = 33/476 (6%)
 Frame = +1

Query  626   PKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPM  685
             PKMTEL+QSLADLN+VRFSAYRTAMKLRRLQKALCLDLLS++ A DA             
Sbjct  4     PKMTELFQSLADLNDVRFSAYRTAMKLRRLQKALCLDLLSMNNAIDA-------------  144

Query  686   DILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIIS  745
                +IINCLTTIYD LEQ+H NLVNVPLCVDMCLNWLLNVYDTGR+G+IRVLSFK GIIS
Sbjct  145   ---EIINCLTTIYDNLEQDHGNLVNVPLCVDMCLNWLLNVYDTGRSGKIRVLSFKVGIIS  315

Query  746   LCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNI-EPSVR  804
             LC+AHLEDKYR+ F+ +A +TGF DQR+LGLLLHD IQ+PRQLGE+ASFGGSNI EPSVR
Sbjct  316   LCRAHLEDKYRFNFRLIAEATGFADQRKLGLLLHDLIQVPRQLGEIASFGGSNIIEPSVR  495

Query  805   SCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGF  864
             SCF+ A  KPEIEAA FLDWM+ EPQSMVWLPVLHR+AAAETAKHQAKCNICKE PI+GF
Sbjct  496   SCFERAGGKPEIEAAHFLDWMKQEPQSMVWLPVLHRLAAAETAKHQAKCNICKEYPIVGF  675

Query  865   RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKR  924
             RYR L+ FN+D+CQSCF SGR AKGHK+ +PM EYCT TTSGEDVRDFAKV++NKFR+K+
Sbjct  676   RYRCLRCFNFDMCQSCFLSGRKAKGHKLSHPMQEYCTATTSGEDVRDFAKVVRNKFRSKK  855

Query  925   YFAKHPRMGYLPVQTVLEGDNMETPASSPQLS-HDDTHSRIEHYASRLAEMENSNGSYLN  983
                KHPR+GYLPVQTVLEGDN+ETP+SSPQ +   D HSR+E YASRLAE+E S      
Sbjct  856   SLKKHPRLGYLPVQTVLEGDNLETPSSSPQQAVSQDMHSRLELYASRLAEVEQS-----M  1020

Query  984   DSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEE  1043
             +S+S +  ++DEH LIQ YCQSL  DS +  P+SPAQI+++++ E+R ELE ++ DLEEE
Sbjct  1021  NSMSSSSDMEDEHTLIQQYCQSLGGDSGV--PKSPAQIVVAIDQEQRAELEAVIKDLEEE  1194

Query  1044  NRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRL  1099
             NRNL+ EY+RLK Q + +     PSP E  P S +  RD ELIAEAKLLRQHKGRL
Sbjct  1195  NRNLRMEYERLKIQKQQQ-----PSPHE--PKS-EVNRDNELIAEAKLLRQHKGRL  1338


>ref|NM_001043262.1| Drosophila melanogaster dystrophin (Dys), transcript variant 
E, mRNA
Length=4529

 Score =  664 bits (1714),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 353/693 (50%), Positives = 465/693 (67%), Gaps = 57/693 (8%)
 Frame = +3

Query  474   ERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVS  533
             E++++ Q+  ++L  ++  AE  K SW P     +    + +++++ LR ++      + 
Sbjct  1440  EKMRQFQKILEDLSSRVALAEQTKTSWLPPSS--VGEANEQMQQLQRLRDKMTTASALLD  1613

Query  534   HVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDR--------VRQLHEAHRD-  584
               N+     T   + +    LS LEDLNTR KLLQ+A+++R         +Q HE   D 
Sbjct  1614  DCNEQQSFFTANQVLVPTPCLSKLEDLNTRMKLLQIAMDERQKVLCQAGAQQTHENGDDG  1793

Query  585   --------FGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLA  636
                      GP     L  SV+ PWERA +   VPYYI+HE +TT WDHP+M EL + LA
Sbjct  1794  RTTSNSGTIGPLPN--LGQSVKPPWERATTAANVPYYIDHERETTHWDHPEMIELMKGLA  1967

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK-QNDQPMDILQIINCLT  695
             DLN +RFSAYRTAMKLR +QK L LD +S+S AC++ D+H L+ QND+ +DI  +   L 
Sbjct  1968  DLNEIRFSAYRTAMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLIDIPDMTTVLH  2147

Query  696   TIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKY  755
             ++Y  +++     +++ L +D+ +NW+LNVYD+ RTG+IRVLSFK G++ LCK HLE+KY
Sbjct  2148  SLYVTIDK-----IDLTLMLDLAINWILNVYDSQRTGQIRVLSFKVGLVLLCKGHLEEKY  2312

Query  756   RYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA-----  810
             RYLF+ VA +    DQRRLGLLLHD IQ+PRQLGEVA+FGGSNIEPSVRSC + A     
Sbjct  2313  RYLFRLVADTDRRADQRRLGLLLHDCIQVPRQLGEVAAFGGSNIEPSVRSCLEQAGISQE  2492

Query  811   ----NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRY  866
                 N    IE   FL W++ EPQS+VWLPVLHR+AAAE AKHQAKCNICKE PI+GFRY
Sbjct  2493  AIDGNQDISIELQHFLGWLQHEPQSLVWLPVLHRLAAAEAAKHQAKCNICKEYPIVGFRY  2672

Query  867   RSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYF  926
             R LK FN+D+CQ CFF GR AK HK+ +PM EYCT TTS EDVRDF + LKNKF++++YF
Sbjct  2673  RCLKCFNFDMCQKCFFFGRNAKNHKLTHPMHEYCTTTTSTEDVRDFTRALKNKFKSRKYF  2852

Query  927   AKHPRMGYLPVQTVLEGDNMETPASSPQLS----HDDTHSRIEHYASRLAEMENSNGSYL  982
              KHPR+GYLPVQ+VLEGD +E+PA SPQ +     +D HSR+E YASRLA++E     Y 
Sbjct  2853  KKHPRVGYLPVQSVLEGDALESPAPSPQHTTHQLQNDMHSRLEMYASRLAQVE-----YG  3017

Query  983   NDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEE  1042
                 +     DDEH LI  YCQ+L   S  S P+SP Q++ ++++E+R ELE I+ DLEE
Sbjct  3018  GTGSNSTPDSDDEHQLIAQYCQALPGTSNGSAPKSPVQVMAAMDAEQREELEAIIRDLEE  3197

Query  1043  ENRNLQAEYDRLKQQHEHKGLSPLP--------SPPEMMPTSPQSPRDAELIAEAKLLRQ  1094
             EN NLQAEY +L  + +    S +P        S   M   S Q  +  +++AEAKLLRQ
Sbjct  3198  ENANLQAEYQQLCSKEQ----SGMPEDSNGMQHSSSSMTGLSGQGEQGQDMMAEAKLLRQ  3365

Query  1095  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
             HKGRLEARMQILEDHN+QLE+QL RLRQLL++P
Sbjct  3366  HKGRLEARMQILEDHNRQLEAQLQRLRQLLDEP  3464


>gb|BT010020.1| Drosophila melanogaster RE11449 full insert cDNA
Length=4541

 Score =  664 bits (1714),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 353/693 (50%), Positives = 465/693 (67%), Gaps = 57/693 (8%)
 Frame = +3

Query  474   ERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVS  533
             E++++ Q+  ++L  ++  AE  K SW P     +    + +++++ LR ++      + 
Sbjct  1440  EKMRQFQKILEDLSSRVALAEQTKTSWLPPSS--VGEANEQMQQLQRLRDKMTTASALLD  1613

Query  534   HVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDR--------VRQLHEAHRD-  584
               N+     T   + +    LS LEDLNTR KLLQ+A+++R         +Q HE   D 
Sbjct  1614  DCNEQQSFFTANQVLVPTPCLSKLEDLNTRMKLLQIAMDERQKVLCQAGAQQTHENGDDG  1793

Query  585   --------FGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLA  636
                      GP     L  SV+ PWERA +   VPYYI+HE +TT WDHP+M EL + LA
Sbjct  1794  RTTSNSGTIGPLPN--LGQSVKPPWERATTAANVPYYIDHERETTHWDHPEMIELMKGLA  1967

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK-QNDQPMDILQIINCLT  695
             DLN +RFSAYRTAMKLR +QK L LD +S+S AC++ D+H L+ QND+ +DI  +   L 
Sbjct  1968  DLNEIRFSAYRTAMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLIDIPDMTTVLH  2147

Query  696   TIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKY  755
             ++Y  +++     +++ L +D+ +NW+LNVYD+ RTG+IRVLSFK G++ LCK HLE+KY
Sbjct  2148  SLYVTIDK-----IDLTLMLDLAINWILNVYDSQRTGQIRVLSFKVGLVLLCKGHLEEKY  2312

Query  756   RYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA-----  810
             RYLF+ VA +    DQRRLGLLLHD IQ+PRQLGEVA+FGGSNIEPSVRSC + A     
Sbjct  2313  RYLFRLVADTDRRADQRRLGLLLHDCIQVPRQLGEVAAFGGSNIEPSVRSCLEQAGISQE  2492

Query  811   ----NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRY  866
                 N    IE   FL W++ EPQS+VWLPVLHR+AAAE AKHQAKCNICKE PI+GFRY
Sbjct  2493  AIDGNQDISIELQHFLGWLQHEPQSLVWLPVLHRLAAAEAAKHQAKCNICKEYPIVGFRY  2672

Query  867   RSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYF  926
             R LK FN+D+CQ CFF GR AK HK+ +PM EYCT TTS EDVRDF + LKNKF++++YF
Sbjct  2673  RCLKCFNFDMCQKCFFFGRNAKNHKLTHPMHEYCTTTTSTEDVRDFTRALKNKFKSRKYF  2852

Query  927   AKHPRMGYLPVQTVLEGDNMETPASSPQLS----HDDTHSRIEHYASRLAEMENSNGSYL  982
              KHPR+GYLPVQ+VLEGD +E+PA SPQ +     +D HSR+E YASRLA++E     Y 
Sbjct  2853  KKHPRVGYLPVQSVLEGDALESPAPSPQHTTHQLQNDMHSRLEMYASRLAQVE-----YG  3017

Query  983   NDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEE  1042
                 +     DDEH LI  YCQ+L   S  S P+SP Q++ ++++E+R ELE I+ DLEE
Sbjct  3018  GTGSNSTPDSDDEHQLIAQYCQALPGTSNGSAPKSPVQVMAAMDAEQREELEAIIRDLEE  3197

Query  1043  ENRNLQAEYDRLKQQHEHKGLSPLP--------SPPEMMPTSPQSPRDAELIAEAKLLRQ  1094
             EN NLQAEY +L  + +    S +P        S   M   S Q  +  +++AEAKLLRQ
Sbjct  3198  ENANLQAEYQQLCSKEQ----SGMPEDSNGMQHSSSSMTGLSGQGEQGQDMMAEAKLLRQ  3365

Query  1095  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
             HKGRLEARMQILEDHN+QLE+QL RLRQLL++P
Sbjct  3366  HKGRLEARMQILEDHNRQLEAQLQRLRQLLDEP  3464


>ref|XM_002102789.1| Drosophila simulans GD19295 (Dsim\GD19295), mRNA
Length=2346

 Score =  662 bits (1709),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 352/691 (50%), Positives = 463/691 (67%), Gaps = 57/691 (8%)
 Frame = +1

Query  476   LQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHV  535
             +++ Q+  ++L  ++  AE  K SW P     +    + +++++ LR ++      +   
Sbjct  1     MRQFQKILEDLSSRVALAEQTKTSWLPPSS--VGEANEQMQQLQRLRDKMTTASALLDDC  174

Query  536   NDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDR--------VRQLHEAHRD---  584
             N+     T   + +    LS LEDLNTR KLLQ+A+++R         +Q HE   D   
Sbjct  175   NEQQSFFTANQVLVPTPCLSKLEDLNTRMKLLQIAMDERQKVLCQAGAQQTHENGDDGRT  354

Query  585   ------FGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADL  638
                    GP     L  SV+ PWERA +   VPYYI+HE +TT WDHP+M EL + LADL
Sbjct  355   TSNSGTIGPLPN--LGQSVKPPWERATTAANVPYYIDHERETTHWDHPEMIELMKGLADL  528

Query  639   NNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK-QNDQPMDILQIINCLTTI  697
             N +RFSAYRTAMKLR +QK L LD +S+S AC++ D+H L+ QND+ +DI  +   L ++
Sbjct  529   NEIRFSAYRTAMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLIDIPDMTTVLHSL  708

Query  698   YDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRY  757
             Y  +++     +++ L +D+ +NW+LNVYD+ RTG+IRVLSFK G++ LC+ HLE+KYRY
Sbjct  709   YVTIDK-----IDLTLMLDLAINWILNVYDSQRTGQIRVLSFKVGLVLLCRGHLEEKYRY  873

Query  758   LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA-------  810
             LF+ VA +    DQRRLGLLLHD IQ+PRQLGEVA+FGGSNIEPSVRSC + A       
Sbjct  874   LFRLVADTDRRADQRRLGLLLHDCIQVPRQLGEVAAFGGSNIEPSVRSCLEQAGISQEAI  1053

Query  811   --NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               N    IE   FL W++ EPQS+VWLPVLHR+AAAE AKHQAKCNICKE PI+GFRYR 
Sbjct  1054  DGNQDISIELQHFLGWLQHEPQSLVWLPVLHRLAAAEAAKHQAKCNICKEYPIVGFRYRC  1233

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK  928
             LK FN+D+CQ CFF GR AK HK+ +PM EYCT TTS EDVRDF + LKNKF++++YF K
Sbjct  1234  LKCFNFDMCQKCFFFGRNAKNHKLTHPMHEYCTTTTSTEDVRDFTRALKNKFKSRKYFKK  1413

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLS----HDDTHSRIEHYASRLAEMENSNGSYLND  984
             HPR+GYLPVQ+VLEGD +E+PA SPQ +     +D HSR+E YASRLA++E     Y   
Sbjct  1414  HPRVGYLPVQSVLEGDALESPAPSPQHTTHQLQNDMHSRLEMYASRLAQVE-----YGGT  1578

Query  985   SISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEEN  1044
               +     DDEH LI  YCQ+L   S  S P+SP Q++ ++++E+R ELE I+ DLEEEN
Sbjct  1579  GSNSTPDSDDEHQLIAQYCQALPGTSNGSAPKSPVQVMAAMDAEQREELEAIIRDLEEEN  1758

Query  1045  RNLQAEYDRLKQQHEHKGLSPLP--------SPPEMMPTSPQSPRDAELIAEAKLLRQHK  1096
              NLQAEY +L  + +    S LP        S   M   S Q  +  +++AEAKLLRQHK
Sbjct  1759  ANLQAEYQQLCSKEQ----SGLPEDSNGMQHSSSSMTGLSGQGEQGQDMMAEAKLLRQHK  1926

Query  1097  GRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
             GRLEARMQILEDHN+QLE+QL RLRQLL++P
Sbjct  1927  GRLEARMQILEDHNRQLEAQLQRLRQLLDEP  2019


>ref|XM_002043269.1| Drosophila sechellia GM26846 (Dsec\GM26846), mRNA
Length=2346

 Score =  658 bits (1698),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 350/691 (50%), Positives = 462/691 (66%), Gaps = 57/691 (8%)
 Frame = +1

Query  476   LQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHV  535
             +++ Q+  ++L  ++  AE  K SW P     +    + +++++ L  ++      +   
Sbjct  1     MRQFQKILEDLSSRVALAEQTKTSWLPPSS--VGEANEQMQQLQRLMDKMTTASALLDDC  174

Query  536   NDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDR--------VRQLHEAHRD---  584
             N+     T   + +    LS LEDLNTR KLL++A+++R         +Q HE   D   
Sbjct  175   NEQQSFFTANQVLVPTPCLSKLEDLNTRMKLLKIAMDERQKVLCQAGAQQTHENGDDGRT  354

Query  585   ------FGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADL  638
                    GP     L  SV+ PWERA +   VPYYI+HE +TT WDHP+M EL + LADL
Sbjct  355   TSNSGTIGPLPN--LGQSVKPPWERATTAANVPYYIDHERETTHWDHPEMIELMKGLADL  528

Query  639   NNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK-QNDQPMDILQIINCLTTI  697
             N +RFSAYRTAMKLR +QK L LD +S+S AC++ D+H L+ QND+ +DI  +   L ++
Sbjct  529   NEIRFSAYRTAMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLIDIPDMTTVLHSL  708

Query  698   YDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRY  757
             Y  +++     +++ L +D+ +NW+LNVYD+ RTG+IRVLSFK G++ LC+ HLE+KYRY
Sbjct  709   YVTIDK-----IDLTLMLDLAINWILNVYDSQRTGQIRVLSFKVGLVLLCRGHLEEKYRY  873

Query  758   LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA-------  810
             LF+ VA +    DQRRLGLLLHD IQ+PRQLGEVA+FGGSNIEPSVRSC + A       
Sbjct  874   LFRLVADTDRRADQRRLGLLLHDCIQVPRQLGEVAAFGGSNIEPSVRSCLEQAGISQEAI  1053

Query  811   --NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               N    IE   FL W++ EPQS+VWLPVLHR+AAAE AKHQAKCNICKE PI+GFRYR 
Sbjct  1054  DGNQDISIELQHFLGWLQHEPQSLVWLPVLHRLAAAEAAKHQAKCNICKEYPIVGFRYRC  1233

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK  928
             LK FN+D+CQ CFF GR AK HK+ +PM EYCT TTS EDVRDF + LKNKF++++YF K
Sbjct  1234  LKCFNFDMCQKCFFFGRNAKNHKLTHPMHEYCTTTTSTEDVRDFTRALKNKFKSRKYFKK  1413

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLS----HDDTHSRIEHYASRLAEMENSNGSYLND  984
             HPR+GYLPVQ+VLEGD +E+PA SPQ +     +D HSR+E YASRLA++E     Y   
Sbjct  1414  HPRVGYLPVQSVLEGDALESPAPSPQHTTHQLQNDMHSRLEMYASRLAQVE-----YGGT  1578

Query  985   SISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEEN  1044
               +     DDEH LI  YCQ+L   S  S P+SP Q++ ++++E+R ELE I+ DLEEEN
Sbjct  1579  GSNSTPDSDDEHQLIAQYCQALPGTSNGSAPKSPVQVMAAMDAEQREELEAIIRDLEEEN  1758

Query  1045  RNLQAEYDRLKQQHEHKGLSPLP--------SPPEMMPTSPQSPRDAELIAEAKLLRQHK  1096
              NLQAEY +L  + +    S LP        S   M   S Q  +  +++AEAKLLRQHK
Sbjct  1759  ANLQAEYQQLCSKEQ----SGLPEDSNGMQHSSSSMTGLSGQGEQGQDMMAEAKLLRQHK  1926

Query  1097  GRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
             GRLEARMQILEDHN+QLE+QL RLRQLL++P
Sbjct  1927  GRLEARMQILEDHNRQLEAQLQRLRQLLDEP  2019


>ref|XM_001652092.1| Aedes aegypti dystrophin partial mRNA
Length=2127

 Score =  657 bits (1694),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 353/731 (48%), Positives = 478/731 (65%), Gaps = 64/731 (8%)
 Frame = +1

Query  473   LERLQELQEATDELDLKLRQAEVIKGSW-QPVGDLLIDSLQDHLEKVKALRGEIAPLKEN  531
             + ++++ Q+  ++L  ++  AE +  SW  P           HL+++K        L ++
Sbjct  1     MYKMRQFQKVLEDLGSRVASAETLIKSWTSPSSATDAAEQMQHLQRLKDKMTTAGALLDD  180

Query  532   VSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRD-------  584
                 N+     T   + +    L+ LEDLNTR KLL +A+++R + L     +       
Sbjct  181   C---NEQQSFFTANHVLVPNQCLAKLEDLNTRMKLLHIAMDERHKVLVAGGANQPSASDA  351

Query  585   -------------FGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTEL  631
                           GP     L+ SV+ PWERA +P  VPYYINHE + T WDHP+M EL
Sbjct  352   DGNKSMQGVSSGTIGPIPN--LAMSVKPPWERATTPANVPYYINHERENTHWDHPEMIEL  525

Query  632   YQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK-QNDQPMDILQI  690
              +SLADLN VRFSAYRTA+KLR +QK L  D ++++ A ++ D+H L+ QND+ +DI  +
Sbjct  526   MKSLADLNEVRFSAYRTALKLRTVQKRLAFDRIAMNVAIESFDRHGLRAQNDKLIDIPDM  705

Query  691   INCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
                L ++Y  +E      +++PL +D+ +NW+LNVYD+ RTG+IRVLSFK G+I LCK H
Sbjct  706   TTVLHSLYVTIEP-----IDMPLMLDLAINWILNVYDSQRTGQIRVLSFKVGLILLCKGH  870

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             LE+KYRYLF+ +A      DQR+LGLLLHD IQ+PRQLGEVA+FGGSNIEPSVRSCF+ A
Sbjct  871   LEEKYRYLFRLIADLEKKVDQRKLGLLLHDCIQVPRQLGEVAAFGGSNIEPSVRSCFERA  1050

Query  811   --NNKPE-----IEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIG  863
               N   E     IEA  FL+W++ EPQS+VWLPVLHR+ AAE AKHQAKCNICKE PI+G
Sbjct  1051  GVNQNGELIETAIEAQHFLNWLQHEPQSLVWLPVLHRLVAAEAAKHQAKCNICKEYPIVG  1230

Query  864   FRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTK  923
             FRYR LK FN+D+CQ CFF GR AK HK+ +PM EYCT TTS EDVRDF + L+NKF+++
Sbjct  1231  FRYRCLKCFNFDMCQRCFFLGRNAKNHKLSHPMHEYCTTTTSTEDVRDFTRALRNKFKSR  1410

Query  924   RYFAKHPRMGYLPVQTVLEGDNMETPASSPQLS----HDDTHSRIEHYASRLAEMENSNG  979
             +YF KHPR+GYLPVQ+VLEGD +E+PA SPQ       +D HSR+E YASRLA++E    
Sbjct  1411  KYFKKHPRVGYLPVQSVLEGDALESPAPSPQHGTHTLQNDMHSRLEMYASRLAQVE----  1578

Query  980   SYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILAD  1039
              Y   S S  +S DDEH LI  YCQSL  +     P+SP Q++ ++++E+R ELE ++ D
Sbjct  1579  -YGTRSNSTPDS-DDEHQLIAQYCQSLPNN---GGPKSPVQVMAAMDAEQREELEAMIKD  1743

Query  1040  LEEENRNLQAEYDRLKQQHEHKGLSPLPSPPE----MMPTSPQSPRDAELIAEAKLLRQH  1095
             LEEEN +LQAEY+RLK +      +P+ +P +       T      + +++AEAKLLRQH
Sbjct  1744  LEEENASLQAEYERLKSKQ-----TPITTPDDSQMGQTGTGGNVGDNLDMMAEAKLLRQH  1908

Query  1096  KGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPML  1155
             KGRLEARMQILEDHN+QLE+QL RLRQLL++P        +T+ + S +  + ++  P  
Sbjct  1909  KGRLEARMQILEDHNRQLEAQLQRLRQLLDEPNTS---KASTLQTRSVTASQLNTESPAK  2079

Query  1156  LRVVGSQTSDS  1166
             L+  G    +S
Sbjct  2080  LQQNGHYDQNS  2112


>gb|BC036095.1| Homo sapiens cDNA clone IMAGE:5300319, containing frame-shift 
errors
Length=3051

 Score =  421 bits (1083),  Expect(2) = 0.0, Method: Compositional matrix adjust.
 Identities = 186/275 (67%), Positives = 233/275 (84%), Gaps = 0/275 (0%)
 Frame = +3

Query  591   HFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAM  650
             H  STSVQ PWERAISPNKVPYYINH+ QTTCWDHPKMTELYQ+LADLNN++FSAYRTAM
Sbjct  1476  HPRSTSVQVPWERAISPNKVPYYINHQAQTTCWDHPKMTELYQTLADLNNIKFSAYRTAM  1655

Query  651   KLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVN  710
             KLRR+QKAL LDL++L+ A +  ++H+L+ ++  MD++++I+CLT +Y+RLE+E   LVN
Sbjct  1656  KLRRVQKALRLDLVTLTTALEIFNEHDLQASEHVMDVVEVIHCLTALYERLEEERGILVN  1835

Query  711   VPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCD  770
             VPLCVDM LNWLLNV+D+GR+G++R LSFKTGI  LC   +++K +YLF QVA+S   CD
Sbjct  1836  VPLCVDMSLNWLLNVFDSGRSGKMRALSFKTGIACLCGTEVKEKLQYLFSQVANSGSQCD  2015

Query  771   QRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQ  830
             QR LG+LLH++IQ+P QLGEVA+FGGSN+EPSVRSCF+F+  KP IEA+ FL+W+ LEPQ
Sbjct  2016  QRHLGVLLHEAIQVPHQLGEVAAFGGSNVEPSVRSCFRFSTGKPVIEASQFLEWVNLEPQ  2195

Query  831   SMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFR  865
             SMVWL VLHRV  AE  KHQ KC+IC++CPI GFR
Sbjct  2196  SMVWLAVLHRVTIAEQVKHQTKCSICRQCPIKGFR  2300


 Score =  258 bits (658),  Expect(2) = 0.0, Method: Compositional matrix adjust.
 Identities = 127/275 (46%), Positives = 182/275 (66%), Gaps = 0/275 (0%)
 Frame = +1

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E++KKS N+R+ LEA SD   +L L LQE++ WL  KD+ELS Q P+ GD   V
Sbjct  553   MNLCWNEIKKKSHNLRARLEAFSDHSGKLQLPLQEIIDWLSQKDEELSAQLPLQGDVALV  732

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q++ + H AF  E+K++ P I S LE+ + FL++ P E LE+ + E ++  P++R QN++
Sbjct  733   QQEKETHAAFMEEVKSRGPYIYSVLESAQAFLSQHPFEELEEPHSESKDTSPKQRIQNLS  912

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R I+ TLE+L E+Q A +EL   L QAE ++ +W+
Sbjct  913   RFVWKQATVASELWEKLTARCVDQHRHIERTLEQLLEIQGAMEELSTTLSQAEGVRATWE  1092

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             P+GDL IDSL +H++ +K  + E +P+K+ V  VNDLA QL    + LS  N   LE +N
Sbjct  1093  PIGDLFIDSLPEHIQAIKLFKEEFSPMKDGVKLVNDLAHQLAISDVHLSMENSQALEQIN  1272

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTS  596
              RWK LQ +V +R++QL +AHRDFGP SQHFLS +
Sbjct  1273  VRWKQLQASVSERLKQLQDAHRDFGPGSQHFLSCT  1377


 Score = 55.5 bits (132),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
 Frame = +1

Query  21    ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
             E+ DWLS  D+ + +Q  + GD+  + +      A M++++ R P +  ++ +AQ   ++
Sbjct  655   EIIDWLSQKDEELSAQLPLQGDVALVQQEKETHAAFMEEVKSRGPYIYSVLESAQAFLSQ  834

Query  81    TSNQE-----ARTIITDRIERIQN--------------QWDEVQEHLQNRRQQLNEMLKD  121
                +E     + +  T   +RIQN               W+++     ++ + +   L+ 
Sbjct  835   HPFEELEEPHSESKDTSPKQRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIERTLEQ  1014

Query  122   STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
               +   A EE    L QA     +W+  G   +D++ + I   K   ++    +  V + 
Sbjct  1015  LLEIQGAMEELSTTLSQAEGVRATWEPIGDLFIDSLPEHIQAIKLFKEEFSPMKDGVKLV  1194

Query  181   NDLALKLLRDYSADDTRKVHMITEN------INASWRSIHKRVSEREAALEETHR  229
             NDLA +L           VH+  EN      IN  W+ +   VSER   L++ HR
Sbjct  1195  NDLAHQLA-------ISDVHLSMENSQALEQINVRWKQLQASVSERLKQLQDAHR  1338


>dbj|AK149002.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN 
full-length enriched library, clone:7120474D01 product:dystrophin, 
muscular dystrophy, full insert sequence
Length=2146

 Score =  648 bits (1671),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 318/336 (94%), Positives = 326/336 (97%), Gaps = 0/336 (0%)
 Frame = +3

Query  279   QDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRS  338
             +DLQGEIE HTD+YHNLDEN QKILRSLEGSD+A LLQRRLDNMNFKWSEL+KKSLNIRS
Sbjct  195   KDLQGEIETHTDIYHNLDENGQKILRSLEGSDEAPLLQRRLDNMNFKWSELQKKSLNIRS  374

Query  339   HLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTK  398
             HLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQND+HRAFKRELKTK
Sbjct  375   HLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDIHRAFKRELKTK  554

Query  399   EPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKL  458
             EPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLR QAEEVN EW+KL
Sbjct  555   EPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRNQAEEVNAEWDKL  734

Query  459   NLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKV  518
             NL SADWQRKIDE LERLQELQEA DELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKV
Sbjct  735   NLRSADWQRKIDEALERLQELQEAADELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKV  914

Query  519   KALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQL  578
             KALRGEIAPLKENV+ VNDLA QLTTLGIQLSPYNLSTLEDLNTRW+LLQVAVEDRVRQL
Sbjct  915   KALRGEIAPLKENVNRVNDLAHQLTTLGIQLSPYNLSTLEDLNTRWRLLQVAVEDRVRQL  1094

Query  579   HEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYI  614
             HEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYI
Sbjct  1095  HEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYI  1202


 Score = 49.3 bits (116),  Expect = 0.014, Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
 Frame = +3

Query  21    ELTDWLSLLDQVIKSQRVMVGDL------EDIN-----EMIIKQKATMQDLEQRR-----  64
             EL  WL L D  +  Q  + GD        DI+     E+  K+   M  LE  R     
Sbjct  426   ELLVWLQLKDDELSRQAPIGGDFPAVQKQNDIHRAFKRELKTKEPVIMSTLETVRIFLTE  605

Query  65    ---PQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKD  121
                  LE+L    + L  +   Q    ++ ++ E +  +WD++     + +++++E L+ 
Sbjct  606   QPLEGLEKLYQEPRELPPEERAQNVTRLLRNQAEEVNAEWDKLNLRSADWQRKIDEALER  785

Query  122   STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
               +  EA +E +  L QA     SW+  G   +D++Q  + + K L  ++   + NV+  
Sbjct  786   LQELQEAADELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVNRV  965

Query  181   NDLALKL------LRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHR  229
             NDLA +L      L  Y+           E++N  WR +   V +R   L E HR
Sbjct  966   NDLAHQLTTLGIQLSPYNLS-------TLEDLNTRWRLLQVAVEDRVRQLHEAHR  1109


>ref|XM_002138048.1| Drosophila pseudoobscura pseudoobscura GA27582 (Dpse\GA27582), 
mRNA
Length=2388

 Score =  645 bits (1665),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 349/712 (49%), Positives = 470/712 (66%), Gaps = 56/712 (7%)
 Frame = +1

Query  475   RLQELQEATDELDLKLRQAEVIKGSW-QPVGDLLIDSLQDHLEKVKALRGEIAPLKENVS  533
             ++++ Q+  ++L  ++  AE  K SW  PV    +    + +++++ LR ++      + 
Sbjct  1     KMRQFQKILEDLSSRVALAEQTKNSWLSPVS---VGEANEQMQQLQRLRDKMTTASALLD  171

Query  534   HVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDR--------VRQLHEAHRD-  584
               N+     T   + +    LS LEDLNTR KLLQ+A+++R         +Q HE   D 
Sbjct  172   DCNEQQSFFTANQVLVPTPCLSKLEDLNTRMKLLQIAMDERQKVLCAAGAQQAHENGDDG  351

Query  585   --------FGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLA  636
                      GP     L  SV+ PWERA +   VPYYI+HE +TT WDHP M EL + LA
Sbjct  352   RNTSNSGTIGPLPN--LGQSVKPPWERATTAANVPYYIDHERETTHWDHPDMIELMKGLA  525

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK-QNDQPMDILQIINCLT  695
             DLN +RFSAYRTAMKLR +QK L LD ++++ AC++ D+H L+ QND+ +DI  +   L 
Sbjct  526   DLNEIRFSAYRTAMKLRSVQKRLALDRITMATACESFDRHGLRAQNDKLIDIPDMTTVLH  705

Query  696   TIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKY  755
             ++Y  +++     +++ L +D+ +NW+LNVYD+ RTG+IRVLSFK G++ LCK HLE+KY
Sbjct  706   SLYVTIDK-----IDLTLMLDLAINWILNVYDSQRTGQIRVLSFKVGLVLLCKGHLEEKY  870

Query  756   RYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA-----  810
             RYLF+ VA +    DQRRLGLLLHD IQ+PRQLGEVA+FGGSNIEPSVRSC + A     
Sbjct  871   RYLFRLVADTERRADQRRLGLLLHDCIQVPRQLGEVAAFGGSNIEPSVRSCLEQAGISQE  1050

Query  811   ----NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRY  866
                 N +  IE   FL W++ EPQS+VWLPVLHR+AAAE AKHQAKCNICKE PI+GFRY
Sbjct  1051  AIDGNQEISIELQHFLGWLQHEPQSLVWLPVLHRLAAAEAAKHQAKCNICKEYPIVGFRY  1230

Query  867   RSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYF  926
             R LK FN+D+CQ CFF GR AK HK+ +PM EYCT TTS EDVRDF + LKNKF++++YF
Sbjct  1231  RCLKCFNFDMCQKCFFFGRNAKNHKLTHPMHEYCTATTSTEDVRDFTRALKNKFKSRKYF  1410

Query  927   AKHPRMGYLPVQTVLEGDNMETPASSPQLS----HDDTHSRIEHYASRLAEMENSNGSYL  982
              KHPR+GYLPVQ+VLEGD +E+PA SPQ +      D H+R+E YASRLA++E     Y 
Sbjct  1411  KKHPRVGYLPVQSVLEGDALESPAPSPQHTTHQLQSDMHTRLEMYASRLAQVE-----YG  1575

Query  983   NDSISPNESIDDEHLLIQHYCQSL-NQDSPLSQPRSPAQILISLESEERGELERILADLE  1041
                 +     DDEH LI  YCQ+L    +  S P+SP Q++ ++++E+R ELE I+ DLE
Sbjct  1576  GTGSNSTPDSDDEHQLIAQYCQALPGTSNGSSAPKSPVQVMAAMDAEQREELEAIIRDLE  1755

Query  1042  EENRNLQAEYDRL--KQQH-----EHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQ  1094
             EEN NLQAEY +L  KQQ       +       S         Q  +  +++AEA+LLRQ
Sbjct  1756  EENANLQAEYQQLCTKQQSGTPDDTNGMQHSSSSSMSGGLGGGQGEQGQDMMAEAQLLRQ  1935

Query  1095  HKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTV-SSPSTSL  1145
             HKGRLEARM+ILEDHN+QLE+QL RLRQLL++P   +    + + S+P ++L
Sbjct  1936  HKGRLEARMRILEDHNRQLEAQLQRLRQLLDEPNGGSSATSSGLPSAPGSAL  2091


>ref|XM_002019869.1| Drosophila persimilis GL12656 (Dper\GL12656), mRNA
Length=2667

 Score =  644 bits (1662),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 349/711 (49%), Positives = 469/711 (65%), Gaps = 56/711 (7%)
 Frame = +1

Query  476   LQELQEATDELDLKLRQAEVIKGSW-QPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSH  534
             +++ Q+  ++L  ++  AE  K SW  PV    +    + +++++ LR ++      +  
Sbjct  1     MRQFQKILEDLSSRVALAEQTKNSWLSPVS---VGEANEQMQQLQRLRDKMTTASALLDD  171

Query  535   VNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDR--------VRQLHEAHRD--  584
              N+     T   + +    LS LEDLNTR KLLQ+A+++R         +Q HE   D  
Sbjct  172   CNEQQSFFTANQVLVPTPCLSKLEDLNTRMKLLQIAMDERQKVLCAAGAQQAHENGDDGR  351

Query  585   -------FGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLAD  637
                     GP     L  SV+ PWERA +   VPYYI+HE +TT WDHP M EL + LAD
Sbjct  352   NTSNSGTIGPLPN--LGQSVKPPWERATTAANVPYYIDHERETTHWDHPDMIELMKGLAD  525

Query  638   LNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK-QNDQPMDILQIINCLTT  696
             LN +RFSAYRTAMKLR +QK L LD ++++ AC++ D+H L+ QND+ +DI  +   L +
Sbjct  526   LNEIRFSAYRTAMKLRSVQKRLALDRITMATACESFDRHGLRAQNDKLIDIPDMTTVLHS  705

Query  697   IYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYR  756
             +Y  +++     +++ L +D+ +NW+LNVYD+ RTG+IRVLSFK G++ LCK HLE+KYR
Sbjct  706   LYVTIDK-----IDLTLMLDLAINWILNVYDSQRTGQIRVLSFKVGLVLLCKGHLEEKYR  870

Query  757   YLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA------  810
             YLF+ VA +    DQRRLGLLLHD IQ+PRQLGEVA+FGGSNIEPSVRSC + A      
Sbjct  871   YLFRLVADTERRADQRRLGLLLHDCIQVPRQLGEVAAFGGSNIEPSVRSCLEQAGISQEA  1050

Query  811   ---NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYR  867
                N +  IE   FL W++ EPQS+VWLPVLHR+AAAE AKHQAKCNICKE PI+GFRYR
Sbjct  1051  IDGNQEISIELQHFLGWLQHEPQSLVWLPVLHRLAAAEAAKHQAKCNICKEYPIVGFRYR  1230

Query  868   SLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFA  927
              LK FN+D+CQ CFF GR AK HK+ +PM EYCT TTS EDVRDF + LKNKF++++YF 
Sbjct  1231  CLKCFNFDMCQKCFFFGRNAKNHKLTHPMHEYCTATTSTEDVRDFTRALKNKFKSRKYFK  1410

Query  928   KHPRMGYLPVQTVLEGDNMETPASSPQLS----HDDTHSRIEHYASRLAEMENSNGSYLN  983
             KHPR+GYLPVQ+VLEGD +E+PA SPQ +      D H+R+E YASRLA++E     Y  
Sbjct  1411  KHPRVGYLPVQSVLEGDALESPAPSPQHTTHQLQSDMHTRLEMYASRLAQVE-----YGG  1575

Query  984   DSISPNESIDDEHLLIQHYCQSL-NQDSPLSQPRSPAQILISLESEERGELERILADLEE  1042
                +     DDEH LI  YCQ+L    +  S P+SP Q++ ++++E+R ELE I+ DLEE
Sbjct  1576  TGSNSTPDSDDEHQLIAQYCQALPGTSNGSSAPKSPVQVMAAMDAEQREELEAIIRDLEE  1755

Query  1043  ENRNLQAEYDRL--KQQH-----EHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQH  1095
             EN NLQAEY +L  KQQ       +       S         Q  +  +++AEA+LLRQH
Sbjct  1756  ENANLQAEYQQLCTKQQSGTPDDTNGMQHSSSSSMSGGLGGGQGEQGQDMMAEAQLLRQH  1935

Query  1096  KGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTV-SSPSTSL  1145
             KGRLEARM+ILEDHN+QLE+QL RLRQLL++P   +    + + S+P ++L
Sbjct  1936  KGRLEARMRILEDHNRQLEAQLQRLRQLLDEPNGGSSATSSGLPSAPGSAL  2088


>ref|XM_001096514.1| PREDICTED: Macaca mulatta dystrophin (DMD), partial mRNA
Length=7542

 Score =  630 bits (1624),  Expect = 2e-177, Method: Compositional matrix adjust.
 Identities = 323/389 (83%), Positives = 335/389 (86%), Gaps = 37/389 (9%)
 Frame = +1

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
             MPSSLMLEVPALADFNRAWTELT+WLSLL +VIKSQRVMVGDLEDINEMIIKQKAT+QDL
Sbjct  6487  MPSSLMLEVPALADFNRAWTELTEWLSLLGRVIKSQRVMVGDLEDINEMIIKQKATVQDL  6666

Query  61    EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  120
             EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK
Sbjct  6667  EQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK  6846

Query  121   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
             DSTQWLEAKEEAEQVLGQARAKLESWKEGPYT+DAIQKKITETKQLAKDLRQWQ NVDVA
Sbjct  6847  DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTIDAIQKKITETKQLAKDLRQWQINVDVA  7026

Query  181   NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
             NDLALKLLRDYSADDTRKVHMITENINASW SIHKR+     A+++      +F L +  
Sbjct  7027  NDLALKLLRDYSADDTRKVHMITENINASWGSIHKRI-----AMQQDQCCSPRFKLKM--  7185

Query  241   FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
                                    L   +  VK       DLQGEIEAHTDVYHNLDENSQ
Sbjct  7186  -----------------------LHRKTYHVK-------DLQGEIEAHTDVYHNLDENSQ  7275

Query  301   KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
             K+LRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW
Sbjct  7276  KVLRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  7455

Query  361   LQLKDDELSRQAPIGGDFPAVQKQNDVHR  389
             LQLKDDELSRQ PIGGDFPAVQKQNDVHR
Sbjct  7456  LQLKDDELSRQTPIGGDFPAVQKQNDVHR  7542


 Score = 60.5 bits (145),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 99/480 (20%), Positives = 211/480 (43%), Gaps = 82/480 (17%)
 Frame = +1

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQ--  58
             +PS+ + E+          T ++  LS ++Q++ +  +   D ED+     KQ+ +++  
Sbjct  5092  VPSTYLTEI----------THVSQALSEVEQLLNAPDLCAKDFEDL----FKQEESLKNI  5229

Query  59    -DLEQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNE  117
              D+ Q+     ++I + +    +++    R  + + + +I  QW++V +  ++R+ + + 
Sbjct  5230  KDILQQSSGRIDIIHSKKTAALQSATPVERVKLQEALSQIDFQWEKVNKMYKDRQGRFDR  5409

Query  118   M----------LKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLA  167
                        +K   QWL    EAEQ L + +   E+W+   Y            K+L 
Sbjct  5410  SVEKWRRFHYDIKIFNQWLT---EAEQFLRKTQIP-ENWEHAKYK--------WYLKELQ  5553

Query  168   KDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEET  227
               + Q QT V   N    ++++  S  D   +     ++N  W+ + K++SER+  LEE 
Sbjct  5554  DGIGQRQTVVRTLNATGEEIIQQSSKTDASILQEKLGSLNLRWQEVCKQLSERKKRLEEQ  5733

Query  228   HRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEA  287
               +L +F  DL +F+ WL EA+  A++  +   +++L E  + VK L+++    QG    
Sbjct  5734  KNILSEFQRDLNEFVLWLEEADNIASIPLEPGNEQQLKEKLEQVKLLVEELPLRQG----  5901

Query  288   HTDVYHNLDENSQKILRSLEGS-DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQ  346
                +   L+E    +L S   S ++   L+ +L   N +W ++ +     +  +EA    
Sbjct  5902  ---ILKQLNETGGPVLVSAPISPEEQDKLENKLKRTNLQWIKVSRALPEKQGEIEAQIKD  6072

Query  347   WKRLHLSLQE-------LLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKE  399
               +L   L++       LL+WL    ++L        + P   K+ ++       ++ K+
Sbjct  6073  LGQLEKKLEDLEEQLNHLLLWLSPIRNQLEIYNQPNQEGPFDIKETEIA------VQAKQ  6234

Query  400   PVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLN  459
             P +   L   + F  E+P                       T+ ++++ E++++EW+ +N
Sbjct  6235  PDVEGILSKGQHFYKEKP----------------------ATQPVKRKLEDLSSEWKTVN  6348


 Score = 46.6 bits (109),  Expect = 0.080, Method: Compositional matrix adjust.
 Identities = 91/424 (21%), Positives = 183/424 (43%), Gaps = 52/424 (12%)
 Frame = +1

Query  154   DAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSI  213
             + +++++ E + L   L++ Q+ ++  +    ++ +   ++ +RK  +  E I   W+ +
Sbjct  2023  EIMEQRLGELQVLQSSLQEQQSGLNYLSTTVKEMSKKAPSEISRKYQLEFEEIETRWKKL  2202

Query  214   HKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER--LLEDSKGV  271
               +++E    LEE    L++    ++    W+ E         D   KE    L DS+ +
Sbjct  2203  SSQLAEHCQKLEEQMNKLRKIQNHIQTLKKWMAEV--------DVFLKEEWPALGDSEIL  2358

Query  272   KELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRK  331
             K+ +KQ + L  +I+      ++++E  QKI    E  + A+ L+  L  +N +W  + +
Sbjct  2359  KKQLKQCRLLVNDIQTIQPSLNSVNEGGQKIKNEAE-PEFALRLEIELKELNTQWDHMCQ  2535

Query  332   KSLNIRSHLEASSDQWKRLHLSLQELLVWL-QLKDDELSRQAPIGGDFP-----AVQKQN  385
             +    +  L+   ++   L   L E+  W+ Q +++ L R      DF       +QK  
Sbjct  2536  QVYARKEALKGGLEKTVSLQKDLSEMHEWMTQAEEEYLER------DFEYKTPDELQKAV  2697

Query  386   DVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLR  445
             +  +  K E + KE  +    E+V   + + P    E L +E   L      Q +   L 
Sbjct  2698  EEMKRAKEEAQQKEAKVKLLTESVNSVIAQAPPVAQEALKKELETLTT--NYQWLCTRLN  2871

Query  446   KQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGD  505
              + + +   W       A W     E L  L++  +  +E++ KL+  E I G  + + +
Sbjct  2872  GKCKTLEEVW-------ACWH----ELLSYLEKANKWLNEVEFKLKTTENIPGGAEEISE  3018

Query  506   LL--IDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTR  563
             +L  +++L  H E             +N + +  LA+ LT  G+     N   LE  N+R
Sbjct  3019  VLHSLENLMQHSE-------------DNPNQIRILAQTLTDGGVMDELIN-EELETFNSR  3156

Query  564   WKLL  567
             W+ L
Sbjct  3157  WREL  3168


>ref|XM_002162901.1| PREDICTED: Hydra magnipapillata similar to dystrophin Dp140ab 
(LOC100213780), mRNA
Length=8310

 Score =  629 bits (1622),  Expect = 3e-177, Method: Compositional matrix adjust.
 Identities = 338/738 (45%), Positives = 479/738 (64%), Gaps = 54/738 (7%)
 Frame = +2

Query  472   TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKEN  531
             T E + +L +  D+L+ +L+ AE  K  W P  D   +++   LE+ K     +  L+  
Sbjct  6170  TDELVNKLVKEIDDLNNRLKDAENRKNLWNPTSDFNCENVNKALEETKVFNDSVTSLEPY  6349

Query  532   VSHVNDLARQL-TTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEA-HRDFGPAS  589
             +  +N   + L  + G+ L       +++   RW  LQ   E R   L+   + D    S
Sbjct  6350  IDSINGKVKALKVSYGVDLGQKQ-KQVDEFLQRWSKLQSECEQRHNMLNNILNNDQDKQS  6526

Query  590   QHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTA  649
             Q  L  SV  PWER+ S NKVPYYINH T+ T WDHPKMTELY +LA+LN+V+F+AYRT+
Sbjct  6527  Q--LQGSVSPPWERSCSLNKVPYYINHTTKVTQWDHPKMTELYNTLAELNDVKFAAYRTS  6700

Query  650   MKLRRLQKALCLDLLSL-SAACDALDQHNLKQN-DQPMDILQIINCLTTIYDRLEQEHNN  707
             MKLR +QKA CLDL+ + + A  A  +H++  N D  +D+ +++  L T++  ++     
Sbjct  6701  MKLRCIQKACCLDLVDMDNVAIKAFQRHDITANKDSLIDVGEMVAVLLTMFGNIDPTRKE  6880

Query  708   LVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTG  767
              + VP CVD+ LNWLLNV+D+GR G++RVLSFK  I+ LC+A LE+K++YLF+Q+A S+G
Sbjct  6881  AIVVPQCVDLTLNWLLNVFDSGRIGKLRVLSFKIAIVLLCRAKLENKWKYLFEQIADSSG  7060

Query  768   FCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRL  827
               D ++LGLLLHD +QIPRQLGE+A+FGGSNIEPS RSCF+ A N   IE   FL+W   
Sbjct  7061  HADSKKLGLLLHDCVQIPRQLGEIAAFGGSNIEPSARSCFEKAKNPTVIEVNNFLEWTSA  7240

Query  828   EPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVA  887
             EPQS+VW+ VLHR+AAAETAKH AKC ICK+ PI+GFRYR LK FNYD+CQ+CF+SGRV+
Sbjct  7241  EPQSLVWMTVLHRLAAAETAKHDAKCGICKDFPIVGFRYRCLKCFNYDLCQNCFWSGRVS  7420

Query  888   KGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHP-RMGYLPVQTVLEGDNM  946
             K H++ +PM +Y   TT+GED+ DF K++KNKF+++RY ++ P ++GYLPVQT++EG ++
Sbjct  7421  KSHRLTHPMHQYSLATTAGEDMSDFVKLMKNKFKSRRYRSRPPKKLGYLPVQTIMEGSSI  7600

Query  947   ETPA--SSPQLSHDDTHSRIEHYAS--RLAEMENSNGSYLNDSISPNESIDDEHLLIQHY  1002
             ETP+  SSP +           Y S  R +  E+ N   ++D       I++EH LIQH 
Sbjct  7601  ETPSVPSSPNIKFS--------YLSNDRSSSPESENYRMVDD-------INEEHRLIQHM  7735

Query  1003  CQSL-NQDSPLSQPRSPAQILISLESEERGELER----ILADLEEENRNLQAEYDRLKQQ  1057
             C+SL ++DS L   +SP+ IL SL+ EE+ ++ +    I++DLEEE+R L++EY+RLK  
Sbjct  7736  CRSLSSEDSRLLPLKSPSAILASLDIEEKIDIAQSVNDIISDLEEEHRALESEYNRLKNM  7915

Query  1058  HEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQL  1117
               +              ++P+S  D+ELIAEA+LLRQHK RLEARMQILE HNKQLE+QL
Sbjct  7916  RAN-------------GSNPRSSSDSELIAEAQLLRQHKVRLEARMQILEHHNKQLEAQL  8056

Query  1118  HRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQ  1177
              RLRQLL+QPQ++  V  +   +P+ +   S    P L R   S T+        L+   
Sbjct  8057  QRLRQLLDQPQSDRSVQSSAGVTPTLTPSSSYHGSPELGRRDYSFTNGYS-----LTNAM  8221

Query  1178  DTSTGLEEVMEQLNNSFP  1195
             D    +++V  Q+ N+FP
Sbjct  8222  D----IQQVTNQIENAFP  8263


 Score =  150 bits (380),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 115/473 (24%), Positives = 232/473 (49%), Gaps = 25/473 (5%)
 Frame = +2

Query  4     SLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQR  63
             S +L+   +  F++   EL D L L++Q +K   + VGD +DI   + K  A  Q++  R
Sbjct  4037  SEVLQEDKINKFDKNVAELHDVLKLIEQKLKGFTLNVGDPDDIELAVQKHNAIQQEVNNR  4216

Query  64    RPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDST  123
             R  LE++I     L   + N+       D+I +++ +WD V + +++++    ++ +D  
Sbjct  4217  RGDLEDVIEMGAALTMNSKNESFNYATDDKITKLKERWDIVSKKIESQKAMFEQLNRDLR  4396

Query  124   QWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDL  183
             +      + +  + +A ++L    +   TV   Q+++    +   ++R+ QT+       
Sbjct  4397  RCNLIITQVDNWIHKAGSQLNERLKVGSTV--FQEELLAFSEQFNNVRK-QTD-------  4546

Query  184   ALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLA  243
                +L+ YS+ D        + +  +W  +  + + R+ +L+E    +  F  ++   L 
Sbjct  4547  --DILQTYSSLDLTSFKGKCKEMMQAWSDLDTKSNIRQQSLQEALDNILVFHKNMIGALT  4720

Query  244   WLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKIL  303
             WL+ AE+    L D+  +    ED+  ++EL ++   L+ +I  H  ++ +L++   +I+
Sbjct  4721  WLSSAESKVAEL-DSLFEASQTEDNTDLEELQQEMLALEEDIALHQAMFQSLNDTGNQIM  4897

Query  304   RSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQL  363
               LE  +    LQ +LD+MN +W+ L  + ++IR  +   + +W++L   +QE++ WL  
Sbjct  4898  MDLEQGEVRTALQSKLDDMNDRWNSLGLRVVDIRDRMADGTGEWRQLLFDMQEIVDWLLR  5077

Query  364   KDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEK  423
                EL+ Q P+G D   ++ Q++ H+AFK +L  ++ VI   L+  R FL +  +  L  
Sbjct  5078  AGQELNSQQPVGSDISTIKHQHENHQAFKGKLLVRQVVIKQVLDQGRNFLMKHQVHELAS  5257

Query  424   LYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERL  476
                         R  N+   +++Q E + T+W+ L  +S  WQ  ID  LE  
Sbjct  5258  ------------REDNIVSSVQEQIEHIETQWQLLMSNSEKWQVTIDTVLENF  5380


>gb|U43518.1|GSU43518 Gobius sp. dystrophin-related protein 2 (DRP2) mRNA, partial 
cds
Length=1440

 Score =  626 bits (1614),  Expect = 3e-176, Method: Compositional matrix adjust.
 Identities = 294/481 (61%), Positives = 376/481 (78%), Gaps = 4/481 (0%)
 Frame = +1

Query  625   HPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQP  684
             HPKMTELYQ+LADLNN++FSAYRTAMKLRR+QK L LDL+ LS+  +   + +L+Q +  
Sbjct  1     HPKMTELYQALADLNNIKFSAYRTAMKLRRVQKVLRLDLVGLSSLAEVFREQDLQQPEHI  180

Query  685   MDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGII  744
             MD++++I+ LT +Y+RLE+E + +VN+PLCVDMCLNWLLNVYD+ R G+IRVLSFK G++
Sbjct  181   MDVVEVIHGLTALYERLEEERSIMVNIPLCVDMCLNWLLNVYDSPRNGKIRVLSFKMGLV  360

Query  745   SLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVR  804
             SLC   +++KY+YLF+QVA   G  DQR L +LLH++IQIPRQLGEVA+FGGSN+EPSVR
Sbjct  361   SLCNEDVQEKYKYLFRQVACPAGTTDQRHLSMLLHEAIQIPRQLGEVAAFGGSNVEPSVR  540

Query  805   SCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGF  864
             SCF+ A +K  IE + FL+W  LEPQSMVWLPVLHRVAAAE+ KHQAKC++CK+CPI GF
Sbjct  541   SCFRVAPSKATIEVSHFLEWTSLEPQSMVWLPVLHRVAAAESTKHQAKCSVCKQCPIKGF  720

Query  865   RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKR  924
             RYRSLK FN DICQ+CF +GR  KG K+HYP++EY TPTTSGE +RDFAK LKNKFR+K+
Sbjct  721   RYRSLKQFNVDICQTCFLTGRTTKGKKLHYPIMEYYTPTTSGEKMRDFAKTLKNKFRSKQ  900

Query  925   YFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLND  984
             YF+KHP+ GYLPVQ+VLE +  ETP SSP+L H DTHSRIEHYASRLAEME+ N S+  D
Sbjct  901   YFSKHPQRGYLPVQSVLEAEASETPCSSPRLPHADTHSRIEHYASRLAEMESQNCSFFTD  1080

Query  985   SISPNESIDDEHLLIQHYCQSLNQDSPLSQ-PRSPAQILISLESEERGELERILADLEEE  1043
             S+SP+ES+D++  L++H   +L  DSPL+Q    PA+  ++      GEL+R LA LE E
Sbjct  1081  SLSPDESLDEDQYLLRHSSPALEPDSPLAQHAPGPARAQVAHPGPP-GELQRTLARLENE  1257

Query  1044  NRNLQAEYDRLKQQHEHKGLSPL--PSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEA  1101
             NR L+ EY RLK +HE     P+   +  E + +     +D EL+AEA++LRQHK RLE 
Sbjct  1258  NRVLENEYRRLKWKHEEAASVPMLTEAGEEGLGSPTGGAQDEELLAEARVLRQHKSRLET  1437

Query  1102  R  1102
             R
Sbjct  1438  R  1440


>emb|X99737.1| Asteroidea sp. mRNA for dystrophin-like protein
Length=1413

 Score =  625 bits (1612),  Expect = 5e-176, Method: Compositional matrix adjust.
 Identities = 305/481 (63%), Positives = 377/481 (78%), Gaps = 14/481 (2%)
 Frame = +1

Query  625   HPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNL--KQND  682
             HPKMTEL+QSL DLN+V+FSAYRTAMKLR+LQKALC DLLS+++A     QH +     D
Sbjct  1     HPKMTELFQSLGDLNDVKFSAYRTAMKLRKLQKALCFDLLSMNSADRIFQQHEVLSSCTD  180

Query  683   QPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTG  742
             + +D+ +II  LT++Y+ +  +H NLV VP CVDMCLNWLLNVYDT R+GR+R LSFK  
Sbjct  181   RTLDVNEIITLLTSVYENITSDHPNLVVVPQCVDMCLNWLLNVYDTVRSGRMRALSFKLA  360

Query  743   IISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPS  802
             II L KAHLEDKYRY+ + VA++ GF DQR LGLLLHD IQIPRQLGEVASFGGSNIEPS
Sbjct  361   IIILSKAHLEDKYRYIVRCVANNNGFIDQRGLGLLLHDCIQIPRQLGEVASFGGSNIEPS  540

Query  803   VRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPII  862
             VRSCF  +  K  IE   FL WM+LEPQSMVW+PVLHR+AA ETAKHQAKCN+CKE PI+
Sbjct  541   VRSCFNMSGGKSHIEPPQFLAWMKLEPQSMVWMPVLHRMAAGETAKHQAKCNVCKEFPIV  720

Query  863   GFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRT  922
             G RYR LK FN+ +CQ+CFFSGRV+K HK  +PM EYCT TTSGEDVRDFAKV++NKF++
Sbjct  721   GLRYRCLKCFNFYMCQNCFFSGRVSKNHKHSHPMQEYCTTTTSGEDVRDFAKVVRNKFKS  900

Query  923   KRYFAKHPRMGYLPVQTVLEGDNMETPASSP-QLSHDDTHSRIEHYASRLAEMENSNGSY  981
             KRY+ KHPR+GYLPVQ+VLEGD++E+P +SP Q++++D H+R+E YASRLAE+E  +GS+
Sbjct  901   KRYYQKHPRVGYLPVQSVLEGDDLESPVTSPQQMANEDMHTRLELYASRLAEVEE-HGSF  1077

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLE  1041
             L    +P+  +DDEH LI  YCQSL  D   S PRSPAQI++++ES++RGELE  +  LE
Sbjct  1078  L----TPSPDLDDEHQLIAQYCQSLGGDVS-SVPRSPAQIVVAIESDQRGELENQILILE  1242

Query  1042  EENRNLQAEYDRLKQ-QHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLE  1100
             EENR L AE DRL+  +++    + + S  +       SP D EL+AEAKLLRQHKGRLE
Sbjct  1243  EENRTLLAELDRLRALRYDDHTRAEVSSEEDFR----HSPADTELVAEAKLLRQHKGRLE  1410

Query  1101  A  1101
             A
Sbjct  1411  A  1413


>gb|U43520.1|MMU43520 Mus musculus dystrophin-related protein 2 (DRP2) mRNA, partial 
cds
Length=1428

 Score =  625 bits (1611),  Expect = 7e-176, Method: Compositional matrix adjust.
 Identities = 298/488 (61%), Positives = 380/488 (77%), Gaps = 21/488 (4%)
 Frame = +1

Query  634   SLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINC  693
             +LADLNN++FSAYRTAMKLRR+QKAL LDL++L+ A +  ++H+L+ ++  MD++++I+C
Sbjct  1     TLADLNNIKFSAYRTAMKLRRVQKALRLDLVTLTTALEIFNEHDLQASEHVMDVVEVIHC  180

Query  694   LTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLED  753
             LT +Y+RLE+E   LVNVPLCVDM LNWLLNV+D+GR+G++R LSFKTGI  LC   +++
Sbjct  181   LTALYERLEEERGILVNVPLCVDMSLNWLLNVFDSGRSGKMRALSFKTGIACLCGTEVKE  360

Query  754   KYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNK  813
             K +YLF QVA+S   CDQR LG LLH++IQ+PRQLGEVA+FGGSN+EPSVRSCF+F+  K
Sbjct  361   KLQYLFSQVANSGSQCDQRHLGALLHEAIQVPRQLGEVAAFGGSNVEPSVRSCFRFSTGK  540

Query  814   PEIEAALFLDWMRLEPQSMVWLP----VLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  869
             P IEA+ FL+W+ LEPQSMVWL     VLHRV  AE  KHQ KC+IC++CPI GFRYRSL
Sbjct  541   PVIEASQFLEWVNLEPQSMVWLAVLHRVLHRVTIAEQVKHQTKCSICRQCPIKGFRYRSL  720

Query  870   KHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKH  929
             K FN DICQ+CF +GR +KG+K+HYP++EY TPTTS E++RDFA  LKNKFR+K+YF+KH
Sbjct  721   KQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPTTSSENMRDFATTLKNKFRSKQYFSKH  900

Query  930   PRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPN  989
             P+ GYLPVQ+VLE D  ETPASSP L H DTHSRIEH+ASRLAEME+ N S+ NDS+SP+
Sbjct  901   PQRGYLPVQSVLESDCSETPASSPMLPHADTHSRIEHFASRLAEMESQNCSFFNDSLSPD  1080

Query  990   ESIDDEHLLIQHYCQSLNQDSPLSQPRSPA---QILISLESEERGELERILADLEEENRN  1046
             +SID++  L++H        SP++  R PA   Q   S+ +E +GELE+ILA LE+ENR 
Sbjct  1081  DSIDEDQYLLRH-------SSPITD-REPAFGQQAPCSMATESKGELEKILAHLEDENRI  1236

Query  1047  LQAEYDRLKQQHEHKGLSP--LPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQ  1104
             LQ E  RLK QHE    +P  +    E  P      R+ EL+AEA++LRQHK RLE RMQ
Sbjct  1237  LQGELRRLKWQHEEAAEAPTLVEGSAEATPDH----RNEELLAEARILRQHKSRLETRMQ  1404

Query  1105  ILEDHNKQ  1112
             ILEDHNKQ
Sbjct  1405  ILEDHNKQ  1428


>ref|XM_001900989.1| Brugia malayi Zinc finger, ZZ type family protein partial mRNA
Length=4851

 Score =  623 bits (1607),  Expect = 2e-175, Method: Compositional matrix adjust.
 Identities = 400/1222 (32%), Positives = 642/1222 (52%), Gaps = 110/1222 (9%)
 Frame = +1

Query  38    VMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERI  97
             V + D E I   +I+ +A +  L+ R   L  ++  +QN            ++ +R E +
Sbjct  1360  VDLADSESIRNAVIQMQAFIDQLKMRYLDLIRILDESQN-----------KVVRERSEVM  1506

Query  98    QNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKL-ESWKEGPYTVDAI  156
               + + +    Q R+  L +ML++S  W + ++     L   + ++ +  K     +  +
Sbjct  1507  TVECNRILGECQRRKMTLTKMLEESRAWDKLRKSLSTWLANVQERVADGSKVDAADLQTL  1686

Query  157   QKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKR  216
             +++++E + +A+   + +  +D  N+ +  LL +Y AD+   +      +NA W   +  
Sbjct  1687  KQELSEIQGIAEIAGEMKFKMDELNECSNALLDNYRADEGHNLSHTISRLNALWSKFNDN  1866

Query  217   VSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMK  276
             V  R A LE   R    F   LE+   W+   E +   L + T   ++L+DS   K+ ++
Sbjct  1867  VRIRRAVLEAALRARSDFYSSLEQLEEWMNSVEMSLVELNEMTINTQMLKDSVKRKKWIE  2046

Query  277   QWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNI  336
               + ++ ++ AH DV  ++++   ++   +E   +   L+ RL +++ +W  L   +  I
Sbjct  2047  DEKSIRADMNAHKDVIGSVEDMGAQLTCRVEDLKEREHLKERLSHIDIRWRHLVGLADAI  2226

Query  337   RSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELK  396
             R+ L  + ++W++L   L E L W + +   L  + P+GG    VQ+Q    +  + E+K
Sbjct  2227  RTRLMNAQEEWEKLFTQLAENLFWAEAQSKALLEEQPVGGSLARVQEQTSFVQKLEHEMK  2406

Query  397   TKEPVIMSTLETVRIFLTEQPL--------------EGLEKLYQEPRELPPEERAQNVTR  442
              ++  +   +     +L +  L              E  +  Y E  EL      + V  
Sbjct  2407  LRQRDVDECITLAHSYLMQHDLRPRTRSTSVLSPDKENGQYFYDENAEL------RRVGI  2568

Query  443   LLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQP  502
              ++  ++ +  EW +L      W   I +   ++++L  A  E  L L   E      +P
Sbjct  2569  QIKSDSDRLVQEWNELREQLNAWAYIIHDANAKMEKLASAIAECQLALSNMEERMEQLRP  2748

Query  503   VGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNT  562
             + +L ++ L   +++ + L+  +A  +  V   ND + QL    I+LS    + L+ +N 
Sbjct  2749  IEELRLEELTAAVDESEQLKEYLARTRIYVDDANDWSGQLLASDIELSSEPSAQLKSIND  2928

Query  563   RWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAIS-PNKVPYYINHETQTT  621
             R   L+  +  R   L  A  DFGP+SQHFL  SVQ PW+RA+S  N++PYYINHET+ T
Sbjct  2929  RITKLKSDLRIRTAALERAMTDFGPSSQHFLRDSVQAPWQRAVSTSNQLPYYINHETEVT  3108

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
              WDHP M E+ + L   N V+FSAYRTAMKLR +QK LCLDLL+L     +L   N    
Sbjct  3109  QWDHPAMVEIMEELTTFNQVKFSAYRTAMKLRAIQKRLCLDLLTLEDIDLSLQALNSMLG  3288

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLV-NVPLCVDMCLNWLLNVYDTGRTGRIRVLSFK  740
             +Q + +   + CL  +++  ++++  L+ ++PL VD+ LN++LNVYD  R   +R+ SF+
Sbjct  3289  EQCLSMKDAVMCLVPLFETAQEKYPKLIHSIPLAVDLLLNFVLNVYDPARDCIMRIFSFR  3468

Query  741   TGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIE  800
               + +LC ++LEDKYRYL++ +A++ G  DQ++L LLL+D I IPR  GE A+FGGSN+E
Sbjct  3469  VLLATLCNSNLEDKYRYLYQLIANNEGV-DQKKLALLLYDIIHIPRFFGEAAAFGGSNVE  3645

Query  801   PSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECP  860
             PSVRSCF+ A     I    FL+W++ EPQS+VWLPV+HR+A+AE AKHQAKCN+CK  P
Sbjct  3646  PSVRSCFETAKYPRLISVDEFLNWLKKEPQSIVWLPVMHRLASAEFAKHQAKCNVCKMFP  3825

Query  861   IIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKF  920
             IIG RYR L+ FN D+CQ+CFFS R+AK HK+ +P+ EYC PTTSGEDVRDF  +++NK 
Sbjct  3826  IIGLRYRCLRCFNVDVCQNCFFSQRLAKNHKLSHPIQEYCLPTTSGEDVRDFGLIVRNKL  4005

Query  921   RTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDD-THSRIEHYASRLAEMENSNG  979
             R+K       R+GYLPVQTV EG  +ET   +P     +  H+RI+  A RL   +  NG
Sbjct  4006  RSK----SKTRIGYLPVQTVDEGPPLETGNVTPANPFTEPVHNRIQLCARRLWRAQGENG  4173

Query  980   SYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILAD  1039
             + +  S    E +                   +++ +SP Q+L  +E   + EL+++L  
Sbjct  4174  TPIPASNDTGEEM----------------RMSMTELKSPLQLLSQVEQMHKEELDQVLHK  4305

Query  1040  LEEENRNLQAEYDRLKQQHEHKGLSP----------LPSPPEMMPTSPQSPR-----DAE  1084
             L+ ENR L+ E +R ++     G +P            S  + M T    P      D +
Sbjct  4306  LQHENRELKKEIERRRKLGNAVGSTPNLTRGSNAAMSRSVTDNMGTGRSVPSLSSSGDDQ  4485

Query  1085  LIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTS  1144
             L+ EA LLRQHK RLE R +ILE+ N+QLE+QL RLR ++ Q Q     N          
Sbjct  4486  LLREAYLLRQHKERLEQRSRILEEQNRQLETQLARLRTVIAQQQNAGSEN----------  4635

Query  1145  LQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGS  1204
              + S   +P        ++S++  EED          G+E            +R + + S
Sbjct  4636  -KESGPEEP--------ESSEASAEED---------EGIE----------YDTRPNRMNS  4731

Query  1205  LFHMADDLGRAMES-LVSVMTD  1225
             L    D LGRAM+S +VSV+ D
Sbjct  4732  LIASVDQLGRAMQSFVVSVVND  4797


>emb|X99738.1| Pectinidae sp. mRNA for dystrophin-like protein
Length=1431

 Score =  621 bits (1602),  Expect = 7e-175, Method: Compositional matrix adjust.
 Identities = 304/490 (62%), Positives = 390/490 (79%), Gaps = 20/490 (4%)
 Frame = +1

Query  625   HPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK-QNDQ  683
             HP MT+L Q+LADLNN+RF+AYRTAMKLR LQK L LDLL+++ A +A D HNL+ +ND 
Sbjct  1     HPMMTDLMQALADLNNIRFAAYRTAMKLRMLQKKLRLDLLAINVAVEAFDHHNLRGRNDS  180

Query  684   PMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGI  743
              M+++++INCL+T+YD +  EH +LVNVPLCVD+ LNW+LNVYD  R+G++RVLS K GI
Sbjct  181   LMNVIEMINCLSTMYDNVSVEHPDLVNVPLCVDLVLNWVLNVYDIARSGKVRVLSLKVGI  360

Query  744   ISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSV  803
             I +C  HL+DKYR+LF+ +A + GF DQRRLGLLLHDS+Q+PRQLGEVASFGGSNIEPSV
Sbjct  361   ILMCNGHLDDKYRFLFRLIADTNGFSDQRRLGLLLHDSMQVPRQLGEVASFGGSNIEPSV  540

Query  804   RSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIG  863
             RSCF+ AN +PEI+A  FL+W+++EPQS+VWLPVLHR+AA+ETAKHQAKCNICKE PI+G
Sbjct  541   RSCFEKANGRPEIQATHFLEWLKMEPQSLVWLPVLHRLAASETAKHQAKCNICKEFPIVG  720

Query  864   FRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTK  923
             FRYR L+ FN+D+CQ+CFFSGR AK H++ +PM EYCT TTSGEDVRDF K+L+NKF+TK
Sbjct  721   FRYRCLRCFNFDVCQNCFFSGRKAKTHELSHPMQEYCTATTSGEDVRDFTKMLRNKFKTK  900

Query  924   RYFAKHPRMGYLPVQTVLEGDNMETPASSPQ--LSHDDTHSRIEHYASRLAEMENSNGSY  981
             ++F KHPR+G+LPVQTVLEGD +E+P+ SPQ  +S  D HSR+E YA+RLAE+E    S 
Sbjct  901   KHFKKHPRLGFLPVQTVLEGDVLESPSPSPQHSISSQDMHSRLELYANRLAEVEQRQASS  1080

Query  982   LNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLE  1041
               DS       DDEH LI  YCQSLN ++  +  +SP QI+++++S+++ ELE ++ DLE
Sbjct  1081  TPDS-------DDEHNLIAQYCQSLNGNTSHTL-KSPMQIMMAVDSDQKSELEAMIKDLE  1236

Query  1042  EENRNLQAEYDRLKQQHEHK----GLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKG  1097
             EEN+ LQ EYDRLKQ +E +    GL  +         +     DAE+IAEAKLLRQHKG
Sbjct  1237  EENKTLQQEYDRLKQANELRENGNGLEEVDD-----DNNSNVDMDAEMIAEAKLLRQHKG  1401

Query  1098  RLEARMQILE  1107
             RLE+RM+ILE
Sbjct  1402  RLESRMKILE  1431


>dbj|AK173373.1| Ciona intestinalis cDNA, clone:cicl022e20, full insert sequence
Length=2819

 Score =  607 bits (1566),  Expect = 1e-170, Method: Compositional matrix adjust.
 Identities = 337/825 (40%), Positives = 497/825 (60%), Gaps = 59/825 (7%)
 Frame = +1

Query  345   DQWKRLHLSLQELLVWLQLKDDELSR-QAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIM  403
             +QW+ +   L+ L+ WL++K+++ ++       D  A+ +    H     EL+ K  VI 
Sbjct  28    EQWEDIASILEGLVDWLKVKNEDTNKIMMQCVADAEALTQFRSQHEILDGELEAKCAVID  207

Query  404   STLETVRIFLTEQPLEGLEKLYQEPRELPPEE-RAQNVTRLLRKQAEEVNTEWEKLNLHS  462
              +L+ V   + +         +QE  E P +  R   + R+    A E+   W+     S
Sbjct  208   RSLKAVDAIVIQ---------HQEQAEYPDKYVRPMQLARI-STLASELREVWKVTQKKS  357

Query  463   ADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKAL-  521
                +  I++ L  ++EL     +  L L+  E  K  W  VG+L I++LQ H++ +K   
Sbjct  358   VQLKLHINKLLPAVEELNLLLRKCYLMLQNIERTKEDWVGVGELPIEALQVHIKNMKLFQ  537

Query  522   RGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEA  581
             +  + P+  N+  +         + +Q +P     ++++  RWK++QV   +R +QL +A
Sbjct  538   KNYMDPIAVNMEKLKSAILYFHEMKMQFTPDTKKKMDEVEMRWKVMQVYCSERTKQLLDA  717

Query  582   HRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNV  641
              RDFGP SQ FL++SV+G WERA++ NKVPYYINH++++T WDHPKM EL +S+ DLN+V
Sbjct  718   ARDFGPNSQLFLTSSVEGAWERAVAENKVPYYINHKSKSTSWDHPKMAELMESMLDLNDV  897

Query  642   RFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN-DQP-----MDILQIINCLT  695
             RF+AYRT+MKL+RLQKALCLDLL+L  A DA  QH L  + D P     +++L II CLT
Sbjct  898   RFTAYRTSMKLQRLQKALCLDLLNLDTAVDAFTQHKLNISIDNPHVKDDVNVLDIITCLT  1077

Query  696   TIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKY  755
             TIYD LE+EH  LVNVPLCVDMCLNWLLNVYDT R+  I   SF TGI S+C + +E+KY
Sbjct  1078  TIYDALEREHKTLVNVPLCVDMCLNWLLNVYDTKRSSTISTRSFITGITSMCNSPIEEKY  1257

Query  756   RYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPE  815
             +Y+F+Q+    GF D+ +LG L+ D + IP+QLGE  +FGG N   SV SCFQ    +PE
Sbjct  1258  KYVFQQIGMPAGFTDRVKLGDLIKDFMLIPKQLGESEAFGGCNPHASVCSCFQLVGRRPE  1437

Query  816   IEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYD  875
             I+AA F+DWM+LEPQS+VWLPVLHR+ +AE   H A+C++C+ECPI+GFRYRSL+HF +D
Sbjct  1438  IDAAQFIDWMKLEPQSLVWLPVLHRLISAENVSHPARCSVCRECPIVGFRYRSLRHFKHD  1617

Query  876   ICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYL  935
             ICQSCFFSGRVAK +K  YP+VEYCTPTTS E++RDF K+LKNK R K   +K  R+GYL
Sbjct  1618  ICQSCFFSGRVAKNNKFCYPIVEYCTPTTSTENIRDFTKILKNKLRNKSRSSK--RIGYL  1791

Query  936   PVQTVLEGDNMETP-----------ASSPQLSH--DDTHSRIEHYASRLAEMENSNGSYL  982
             PV+T    D+ E P            S  Q +   ++TH +IE YA  LA++++  G   
Sbjct  1792  PVKT----DDKEDPNDDGTNDVIDGGSDDQTNGGANETHEKIEEYARILADLDDETG---  1950

Query  983   NDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEE  1042
                + P   +D+E   I  YC +L +D   +       I  S  S  R +L      ++E
Sbjct  1951  ---VQP--PLDEEQEYILEYCGALTEDKSPTIFTHQEDIFSSKAS--RSDLPSP-PRIKE  2106

Query  1043  ENRNLQ-AEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEA  1101
              N  +  ++   + +QH   G  P          S +     +L+ EAK+L+ H  R++ 
Sbjct  2107  VNVAIHDSKPYSVAKQHNDAGNQP--------HVSSRLSNGPDLMIEAKILQHHSSRIDT  2262

Query  1102  RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTV-SSPSTSL  1145
             +M++LE+HN+ +++QL  L+ L+   +  ++ + + +  SPS  +
Sbjct  2263  QMKMLENHNESIKNQLQELKMLMNDSETSSEHSMSHIFESPSVHI  2397


>dbj|AK222319.1| Ciona intestinalis cDNA, clone:cibd066b03, full insert sequence
Length=2811

 Score =  606 bits (1563),  Expect = 2e-170, Method: Compositional matrix adjust.
 Identities = 339/835 (40%), Positives = 499/835 (59%), Gaps = 59/835 (7%)
 Frame = +3

Query  335   NIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSR-QAPIGGDFPAVQKQNDVHRAFKR  393
             + R+   +  +QW+ +   L+ L+ WL++K+++ ++       D  A+ +    H     
Sbjct  3     SCRATFLSMMEQWEDIASILEGLVDWLKVKNEDTNKIMMQCVADAEALTQFRSQHEILDG  182

Query  394   ELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEE-RAQNVTRLLRKQAEEVN  452
             EL+ K  VI  +L+ V   + +         +QE  E P +  R   + R+    A E+ 
Sbjct  183   ELEAKCAVIDRSLKAVDAIVIQ---------HQEQAEYPDKYVRPMQLARI-STLASELR  332

Query  453   TEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQ  512
               W+     S   +  I++ L  ++EL     +  L L+  E  K  W  VG+L I++LQ
Sbjct  333   EVWKVTQKKSVQLKLHINKLLPAVEELNLLLRKCYLMLQNIERTKEDWVGVGELPIEALQ  512

Query  513   DHLEKVKAL-RGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAV  571
              H++ +K   +  + P+  N+  +         + +Q +P     ++++  RWK++QV  
Sbjct  513   VHIKNMKLFQKNYMDPIAVNMEKLKSAILYFHEMKMQFTPDTKKKMDEVEMRWKVMQVYC  692

Query  572   EDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTEL  631
              +R +QL +A RDFGP SQ FL++SV+G WERA++ NKVPYYINH++++T WDHPKM EL
Sbjct  693   SERTKQLLDAARDFGPNSQLFLTSSVEGAWERAVAENKVPYYINHKSKSTSWDHPKMAEL  872

Query  632   YQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN-DQP-----M  685
              +S+ DLN+VRF+AYRT+MKL+RLQKALCLDLL+L  A DA  QH L  + D P     +
Sbjct  873   MESMLDLNDVRFTAYRTSMKLQRLQKALCLDLLNLDTAVDAFTQHKLNISIDNPHVKDDV  1052

Query  686   DILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIIS  745
             ++L +I CLTTIYD LE+EH  LVNVPLCVDMCLNWLLNVYDT R+  I   SF TGI S
Sbjct  1053  NVLDMITCLTTIYDALEREHKTLVNVPLCVDMCLNWLLNVYDTKRSSTISTRSFITGITS  1232

Query  746   LCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRS  805
             +C + +E+KY+Y+F+Q+    GF D+ +LG L+ D + IP+QLGE  +FGG N   SV S
Sbjct  1233  MCNSPIEEKYKYVFQQIGMPAGFTDRVKLGDLIKDFMLIPKQLGESEAFGGCNPHASVCS  1412

Query  806   CFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFR  865
             CFQ    +PEI+AA F+DWM+LEPQS+VWLPVLHR+ +AE   H A+C++C+ECPI+GFR
Sbjct  1413  CFQLVGRRPEIDAAQFIDWMKLEPQSLVWLPVLHRLISAENVSHPARCSVCRECPIVGFR  1592

Query  866   YRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRY  925
             YRSL+HF +DICQSCFFSGRVAK +K  YP+VEYCTPTTS E++RDF K+LKNK R K  
Sbjct  1593  YRSLRHFKHDICQSCFFSGRVAKNNKFCYPIVEYCTPTTSTENIRDFTKILKNKLRNKSR  1772

Query  926   FAKHPRMGYLPVQTVLEGDNMETP-----------ASSPQLSH--DDTHSRIEHYASRLA  972
              AK  R+GYLPV+T    D+ E P            S  Q +   ++TH +IE YA  LA
Sbjct  1773  SAK--RIGYLPVKT----DDKEDPNDDVTNDVIDGGSDDQTNGGANETHEKIEEYARILA  1934

Query  973   EMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGE  1032
             ++++  G      + P   +D+E   I  YC +L +D   +       I  S  S  R +
Sbjct  1935  DLDDETG------VQP--PLDEEQECILEYCGALTEDKSPTIFTHQEDIFSSKAS--RSD  2084

Query  1033  LERILADLEEENRNLQAEYDRL-KQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKL  1091
             L      ++E N  +      L  +QH   G  P          S +     +L+ EAK+
Sbjct  2085  LPSP-PRIKEVNVAIHDSKPYLVAKQHIDAGNQP--------HVSSRLSNGPDLMIEAKI  2237

Query  1092  LRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTV-SSPSTSL  1145
             L+ H  R++ +M++LE+HN+ +++QL  L+ L+   +  ++ + + +  SPS  +
Sbjct  2238  LQHHSSRIDTQMKMLENHNESIKNQLQELKMLMNDSETSSEHSMSHIFESPSVHI  2402


>ref|XM_002129566.1| PREDICTED: Ciona intestinalis similar to dystrophin (LOC100183361), 
mRNA
Length=2802

 Score =  605 bits (1560),  Expect = 5e-170, Method: Compositional matrix adjust.
 Identities = 334/825 (40%), Positives = 494/825 (59%), Gaps = 59/825 (7%)
 Frame = +3

Query  345   DQWKRLHLSLQELLVWLQLKDDELSR-QAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIM  403
             +QW+ +   L+ L+ WL++K+++ ++       D  A+ +    H     EL+ K  VI 
Sbjct  39    EQWEDIASILEGLIDWLKVKNEDTNKIMMQCVADAEALTQFRSQHEILDGELEAKCAVID  218

Query  404   STLETVRIFLTEQPLEGLEKLYQEPRELPPEE-RAQNVTRLLRKQAEEVNTEWEKLNLHS  462
              +L+ V   + +         +QE  E P +  R   + R+    A E+   W+     S
Sbjct  219   RSLKAVDAIVIQ---------HQEQAEYPDKYVRPMQLARI-STLASELREVWKVTQKKS  368

Query  463   ADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKAL-  521
                +  I++ L  ++EL     +  + L+  E  K  W  VG+L I++LQ H++ +K   
Sbjct  369   VQLKLHINKLLPAVEELNLLLRKCYIMLQNIERTKEDWVGVGELPIEALQVHIKNMKLFQ  548

Query  522   RGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEA  581
             +  + P+  N+  +         + +Q +P     ++++  RWK++QV   +R +QL +A
Sbjct  549   KNYMDPIAVNMEKLKSAILYFHEMKMQFTPDTKKKMDEVEMRWKVMQVYCSERTKQLLDA  728

Query  582   HRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNV  641
              RDFGP SQ FL++SV+G WERA++ NKVPYYINH++++T WDHPKM EL +S+ DLN+V
Sbjct  729   ARDFGPNSQLFLTSSVEGAWERAVAENKVPYYINHKSKSTSWDHPKMAELMESMLDLNDV  908

Query  642   RFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN-DQP-----MDILQIINCLT  695
             RF+AYRT+MKL+RLQKALCLDLL+L  A DA  QH L  + D P     +++L +I CLT
Sbjct  909   RFTAYRTSMKLQRLQKALCLDLLNLDTAVDAFTQHKLNISIDNPHVKDDVNVLDMITCLT  1088

Query  696   TIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKY  755
             TIYD LE+EH  LVNVPLCVDMCLNWLLNVYDT R+  I   SF TGI S+C + +E+KY
Sbjct  1089  TIYDALEREHKTLVNVPLCVDMCLNWLLNVYDTKRSSTISTRSFITGITSMCNSPIEEKY  1268

Query  756   RYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPE  815
             +Y+F+Q+    GF D+ +LG L+ D + IP+QLGE  +FGG N   SV SCFQ    +PE
Sbjct  1269  KYVFQQIGMPAGFTDRVKLGDLIKDFMLIPKQLGESEAFGGCNPHASVCSCFQLVGRRPE  1448

Query  816   IEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYD  875
             I+AA F+DWM+LEPQS+VWLPVLHR+ +AE   H A+C++C+ECPI+GFRYRSL+HF +D
Sbjct  1449  IDAAQFIDWMKLEPQSLVWLPVLHRLISAENVSHPARCSVCRECPIVGFRYRSLRHFKHD  1628

Query  876   ICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYL  935
             ICQSCFFSGRVAK +K  YP+VEYCTPTTS E++RDF K+LKNK R K   AK  R+GYL
Sbjct  1629  ICQSCFFSGRVAKNNKFCYPIVEYCTPTTSTENIRDFTKILKNKLRNKSRSAK--RIGYL  1802

Query  936   PVQTVLEGDNMETPASS-------------PQLSHDDTHSRIEHYASRLAEMENSNGSYL  982
             PV+T    D+ E P                     ++TH +IE YA  LA++++  G   
Sbjct  1803  PVKT----DDKEDPNDDGTNDVIDGGIDDQTNGGANETHEKIEEYARILADLDDETG---  1961

Query  983   NDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEE  1042
                + P   +D+E   I  YC +L +D   +       I  S  S  R +L      ++E
Sbjct  1962  ---VQP--PLDEEQECILEYCGALTEDKSPTIFTHQEDIFSSKAS--RSDLPSP-PRIKE  2117

Query  1043  ENRNLQ-AEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEA  1101
              N  +  ++   + +QH   G  P          S +     +L+ EAK+L+ H  R++ 
Sbjct  2118  VNVAIHDSKPYSVAKQHNDAGNQP--------HVSSRLSNGPDLMIEAKILQHHSSRIDT  2273

Query  1102  RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTV-SSPSTSL  1145
             +M++LE+HN+ +++QL  L+ L+   +  ++ + + +  SPS  +
Sbjct  2274  QMKMLENHNESIKNQLQELKMLMNDSETSSEHSMSHIFESPSVHI  2408


>ref|XM_695636.3| PREDICTED: Danio rerio similar to putative utrophin (LOC571987), 
mRNA
Length=1395

 Score =  581 bits (1497),  Expect = 1e-162, Method: Compositional matrix adjust.
 Identities = 286/515 (55%), Positives = 359/515 (69%), Gaps = 54/515 (10%)
 Frame = +1

Query  434   EERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQA  493
             EE+ + +   ++ Q  EV   WE+ ++ +  +Q++ID  L +L+ LQ+A ++L+L L + 
Sbjct  10    EEKIRRLAEAVQDQVCEVQQIWEQFSVQTVSFQQQIDWALGKLRNLQDAMNQLELGLVEM  189

Query  494   EVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYN  553
             E    +W      +++ + D +E                         + TLG Q  P  
Sbjct  190   E--NENWPSEEQGMVNCVLDSVEN------------------------MGTLGSQ-HP--  282

Query  554   LSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYY  613
                 +   T  +LL                     S  FLS SVQ PW+RA+  N VPYY
Sbjct  283   ----QSSQTERRLL---------------------SHDFLSDSVQFPWQRAVFHNDVPYY  387

Query  614   INHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDAL  673
             INHE Q+T WDHP+MT+L+QS+ADL++VRFSAYRTAMK RRLQKALCLDLL LS A    
Sbjct  388   INHEQQSTSWDHPEMTQLFQSMADLSHVRFSAYRTAMKSRRLQKALCLDLLELSIAQSVF  567

Query  674   DQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGR  733
             DQHNL  N Q ++I  IINCL TIY  L+Q H +LVNVPLCVDMCLNWLL VYD+GR+G+
Sbjct  568   DQHNLTHNGQLLEIPGIINCLCTIYCELQQVHPDLVNVPLCVDMCLNWLLKVYDSGRSGK  747

Query  734   IRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVAS  793
             ++VLS K G+ SL K  ++DKY+YLF QVAS+ G C QR+L LLLH+SIQIP QLGE A+
Sbjct  748   VQVLSMKIGLFSLSKGPIKDKYKYLFAQVASAAGVCTQRQLELLLHNSIQIPHQLGEAAA  927

Query  794   FGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKC  853
             FGGSN+EPSVRSCFQ+   +  IE   F+DWM LEPQSMVWLPVLHRV AAETAKHQAKC
Sbjct  928   FGGSNMEPSVRSCFQYVGRQDVIELQQFVDWMHLEPQSMVWLPVLHRVTAAETAKHQAKC  1107

Query  854   NICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFA  913
             NICKECP++GFRYRSLKHFNY++CQ+CFFSGR++K H +  PMVEYCTPTTSGEDVRDF 
Sbjct  1108  NICKECPMVGFRYRSLKHFNYNVCQTCFFSGRISKDHHLSDPMVEYCTPTTSGEDVRDFT  1287

Query  914   KVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET  948
             KVLKNKFR+K+YF KHPR+GYLPVQT+LE ++ +T
Sbjct  1288  KVLKNKFRSKKYFTKHPRLGYLPVQTILEEEHSDT  1392


>ref|XR_026973.1| PREDICTED: Gallus gallus similar to dystrophin-related protein 
2 A-form splice (LOC422193), mRNA
Length=2953

 Score =  570 bits (1468),  Expect = 2e-159, Method: Compositional matrix adjust.
 Identities = 266/495 (53%), Positives = 358/495 (72%), Gaps = 18/495 (3%)
 Frame = +1

Query  410   RIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKI  469
             R FL++ P E L +     ++  P  R QN++R + KQA   +  WEKL     D  R I
Sbjct  787   RPFLSQHPFEELGEPTFRKQDASPRHRIQNISRFVWKQANVASELWEKLTARCVDQHRHI  966

Query  470   DETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLK  529
             + TLE+L E++ A +EL   L QAE ++ +W+P+GDL IDSL +H++  K  + E++P+K
Sbjct  967   ERTLEQLLEIKGAMEELSTALDQAESVRETWEPIGDLFIDSLPEHIQSTKLFKEELSPMK  1146

Query  530   ENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFG--P  587
             + V  VNDLA QL    + LS  N  +LE +NTRWK LQV          E   D G  P
Sbjct  1147  DGVKVVNDLAHQLAISDVHLSMENSRSLEQINTRWKQLQV-------M*GEVGSDGGHLP  1305

Query  588   ASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYR  647
             A    +S  +   W R      V +   H+ QTTCWDHPKMTELYQ+LADLNN++FSAYR
Sbjct  1306  APVALISVRI---WIR------VGWRYGHQAQTTCWDHPKMTELYQTLADLNNIKFSAYR  1458

Query  648   TAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNN  707
             TAMKLRR+QKAL LD+++L+ A +  ++H+L+ +D+ MD++++I+CLT++Y+RLE+E   
Sbjct  1459  TAMKLRRVQKALRLDMVTLATALEIFNEHDLQPSDRAMDVVEVIHCLTSLYERLEEERGI  1638

Query  708   LVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTG  767
             LVNVPLCVDM LNWLLNV+D+GR+G++R LSFKTGI  LC   +++K++YLF QVA++ G
Sbjct  1639  LVNVPLCVDMSLNWLLNVFDSGRSGKMRALSFKTGIACLCGTEVKEKFQYLFSQVANAGG  1818

Query  768   FCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRL  827
              CDQR LG+LLH++IQ+PRQLGEVA+FGGSN+EPS+RSCF+F++ KP IEAA FL+W  L
Sbjct  1819  LCDQRHLGVLLHEAIQVPRQLGEVAAFGGSNVEPSIRSCFRFSHGKPAIEAAQFLEWANL  1998

Query  828   EPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVA  887
             EPQSMVWL VLHRV  AE  KHQ KC++C++CPI GFRYRSLK FN DICQ+CF +GR +
Sbjct  1999  EPQSMVWLAVLHRVTMAEQVKHQTKCSVCRQCPIKGFRYRSLKQFNVDICQTCFLTGRAS  2178

Query  888   KGHKMHYPMVEYCTP  902
             KG+K+HYP++EY TP
Sbjct  2179  KGNKLHYPIMEYYTP  2223


 Score =  160 bits (405),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 102/214 (47%), Positives = 138/214 (64%), Gaps = 14/214 (6%)
 Frame = +1

Query  993   DDEHLLIQHYCQSLNQDSPLS--QPRSPAQILISLESEERGELERILADLEEENRNLQAE  1050
             DD+  L++H        SP++  +P    Q+  SL  +++GELERILA LE+ENR LQ E
Sbjct  2269  DDDQYLLRH-------SSPITDREPAGSQQVPGSLPMDDKGELERILAHLEDENRILQGE  2427

Query  1051  YDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHN  1110
               RLK QH+    SP  +     P S Q PR+ EL+AEA++LRQHK RLE RMQILEDHN
Sbjct  2428  LRRLKWQHDEAVESPTLATGS--PESVQDPRNEELLAEARILRQHKSRLETRMQILEDHN  2601

Query  1111  KQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEE  1170
             KQLESQLHRLR+LL QP AE+  NG+  SS ++S  +S+  QP   R     T D+   +
Sbjct  2602  KQLESQLHRLRELLLQPPAESNGNGSAASSLASSPHQSEGGQP---RDKEHDTPDTEAAD  2772

Query  1171  DLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGS  1204
             ++ +  Q+ S  LE++ME+L ++FP+SRG  V S
Sbjct  2773  EVEAKTQEVSVCLEDIMEKLRSAFPNSRGTRVKS  2874


 Score = 91.7 bits (226),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 47/113 (41%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
 Frame = +3

Query  322  MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
            MN  W+E++KKS ++R+ LEA SD   +L + LQE++ WL  KD+ELS Q P+ GD   V
Sbjct  522  MNLCWNEIKKKSHSLRARLEAFSDHSGKLQVPLQEIIDWLGQKDEELSAQLPLRGDVLLV  701

Query  382  QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKL-YQEPRELPP  433
            Q++ + H AF  E+K++ P I S LE+ + F    P+ G  +  +Q+ R +PP
Sbjct  702  QQEKETHAAFMEEVKSRGPYIYSVLESAQAFPLPAPI*GTGRANFQKARCVPP  860


>emb|AJ012469.1| Caenorhabditis elegans mRNA for DYS-1 protein, partial
Length=11025

 Score =  561 bits (1447),  Expect = 6e-157, Method: Compositional matrix adjust.
 Identities = 380/1209 (31%), Positives = 618/1209 (51%), Gaps = 112/1209 (9%)
 Frame = +1

Query  62     QRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKD  121
              Q R Q  +L+T    ++    N E R +I ++I  I  Q               NE  ++
Sbjct  7606   QVRQQAAQLLT---EMRRTIENCEKRCLILNQISDIARQ---------------NEASRN  7731

Query  122    STQ-WLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
                + WL++   A  V+G+ R +         + + +++++   +++ + L + +  +   
Sbjct  7732   EMELWLKS---ASDVIGERRVE-------ELSEEVVRQELQVLERVVEQLTERKDKMAEI  7881

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              N  A K++  Y+ D+   +  +   +N SW   +  +  R A LE + R  + F   L +
Sbjct  7882   NSQANKIVDTYTKDEAHNLSHLLSRLNMSWTKFNDNIRIRRAVLEASLRSXRDFHSALSE  8061

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              F  WL+  E   + L   T   + ++D+   K   + ++ L  E+ AH DV  ++++  +
Sbjct  8062   FEKWLSRQEDNCSKLSADTSNHQAIKDTSKRKNWTQSFKTLNAELNAHEDVMKSVEKMGK  8241

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
               +  SLE  ++ V L +R+     +W+ LRK +  I   LE +  +W++L   L +LL W
Sbjct  8242   MLAESLESGNEKVELLKRVGETTRRWTALRKTTNEIGERLEKAEQEWEKLSDGLADLLSW  8421

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              ++ K   +  + P GG   AV +Q    +  +RE+++K     ST+E    FL +  L  
Sbjct  8422   VEAKKQAIMDEQPTGGSLSAVMQQASFVKGLQREIESKTANYKSTVEEAHSFLMQHDLRP  8601

Query  421    -------LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETL  473
                     L+  Y++      E+R + +   +    E +   W +L +    W + +   +
Sbjct  8602   KLHSPHVLDDDYEKEELANLEQRRRGLE--INANCERLKKNWAELGIEVESWDKLVQHAM  8775

Query  474    ERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVS  533
              +RLQEL+    E  L L  +E    + + V  + ++ L+   E+   +   I  ++  V 
Sbjct  8776   QRLQELERNLAECQLHLTSSENEIETMKAVEKIHLEDLKIAREETDQISKRIDEVRLFVD  8955

Query  534    HVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFL  593
               VND A +L    ++L  +    +E +N R+  L+ A+  R   +  A  DFGP S+HFL
Sbjct  8956   DVNDAAARLLAEDLKLDEHAKGQIEHVNKRYSTLKRAIRIRQAAVRNAASDFGPTSEHFL  9135

Query  594    STSVQGPWERAIS-PNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKL  652
              + SV  PW+RAIS  N +PYYI   ++ T W+HP   E+ + L+  N V+F AYRTAMKL
Sbjct  9136   NQSVTLPWQRAISKSNLLPYYIEQTSEKTQWEHPVWVEIVKELSQFNRVKFLAYRTAMKL  9315

Query  653    RRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLV-NV  711
              R LQK LCLDL+ L+    A  +      ++   +  ++  L  +Y+ L  ++ N V +V
Sbjct  9316   RALQKRLCLDLVDLTLLEKAFVRLKGLSAEECPGLEGMVCALLPMYEALHAKYPNQVQSV  9495

Query  712    PLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQ  771
               L VD+C+N+LLN++D  R G +RVLSFK  +I      LE+KYRYLFK V S  G   Q
Sbjct  9496   SLAVDICINFLLNLFDQSRDGIMRVLSFKIAMIVFSNIPLEEKYRYLFKLV-SQDGHATQ  9672

Query  772    RRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQS  831
              +++ LLL+D I IPR +GE A+FGG+N+EPSVRSCF+     P I    F+DW++ EPQS
Sbjct  9673   KQIALLLYDLIHIPRLVGESAAFGGTNVEPSVRSCFETVRLAPTISEGAFIDWVKKEPQS  9852

Query  832    MVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHK  891
              +VWL V+HR+  +E+ KH +KCN+CK  PIIG RYR L  FN D+CQ+CFFS R AK H+
Sbjct  9853   IVWLAVMHRLVISESTKHASKCNVCKMFPIIGIRYRCLTCFNCDLCQNCFFSQRTAKSHR  10032

Query  892    MHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET-PA  950
               ++PM EYC  TTS +D RDFAK+++NKFR     A   + GYLP+    EG  +   PA
Sbjct  10033  TNHPMQEYCEKTTSSDDARDFAKMIRNKFR-----ASKRQKGYLPIDVAEEGIPLTCPPA  10197

Query  951    SSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDS  1010
                   + +  ++      + LA++   +G               EH+             
Sbjct  10198  KVTNQATEQMNADTSQMTAHLAKLSAEHGG------------GAEHM------------E  10305

Query  1011   PLSQPRSPAQILISLESEERGELERILADLEEENRNLQA------------EYDRLKQQH  1058
              P+   +SP QI+  +E  +R E++++L  L+ EN+ L+             E DR  ++H
Sbjct  10306  PV---QSPLQIINQVEQLQRDEMDQMLHRLQFENKQLRKELEWKRGAASTMEIDRSSKRH  10476

Query  1059   EHK-------GLSPLPSPPEMMP-TSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHN  1110
              + +       G  PL +   ++   S QS  D  ++ EAK LR HK RLE R +ILE  N
Sbjct  10477  QERHQSESRGGTLPLRNGRSVVSLKSTQSQND--VMDEAKALRLHKQRLEHRSRILEQQN  10650

Query  1111   KQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEE  1170
              +QLE QL RL+++++  + +A ++       + SL R    QP       S ++ ++   
Sbjct  10651  EQLEMQLQRLKKVIDAQKQQAPLS-------TNSLLRGSHHQPWSPERARSGSASTLDRG  10809

Query  1171   DLLSP-----PQDTSTGLEEVMEQLNNSFPSSRGHNVG---SLFHMADDLGRAMESL-VS  1221
               ++S       +    G E+  ++   +    RG +VG   +L    DDLG+AMESL VS
Sbjct  10810  LIVSSRHQEQAEAAGGGAEDSSDEAGGAGGGPRGSSVGQMQNLMTACDDLGKAMESLVVS  10989

Query  1222   VMTDEEGAE  1230
              V+ D +  E
Sbjct  10990  VVYDSDDEE  11016


>ref|NM_060545.5| Caenorhabditis elegans DYStrophin related family member (dys-1) 
(dys-1) mRNA, complete cds
Length=11025

 Score =  561 bits (1446),  Expect = 9e-157, Method: Compositional matrix adjust.
 Identities = 380/1209 (31%), Positives = 618/1209 (51%), Gaps = 112/1209 (9%)
 Frame = +1

Query  62     QRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKD  121
              Q R Q  +L+T    ++    N E R +I ++I  I  Q               NE  ++
Sbjct  7606   QVRQQAAQLLT---EMRRTIENCEKRCLILNQISDIARQ---------------NEASRN  7731

Query  122    STQ-WLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
                + WL++   A  V+G+ R +         + + +++++   +++ + L + +  +   
Sbjct  7732   EMELWLKS---ASDVIGERRVE-------ELSEEVVRQELQVLERVVEQLTERKDKMAEI  7881

Query  181    NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEK  240
              N  A K++  Y+ D+   +  +   +N SW   +  +  R A LE + R  + F   L +
Sbjct  7882   NSQANKIVDTYTKDEAHNLSHLLSRLNMSWTKFNDNIRIRRAVLEASLRSRRDFHSALSE  8061

Query  241    FLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQ  300
              F  WL+  E   + L   T   + ++D+   K   + ++ L  E+ AH DV  ++++  +
Sbjct  8062   FEKWLSRQEDNCSKLSADTSNHQAIKDTSKRKNWTQSFKTLNAELNAHEDVMKSVEKMGK  8241

Query  301    KILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
               +  SLE  ++ V L +R+     +W+ LRK +  I   LE +  +W++L   L +LL W
Sbjct  8242   MLAESLESGNEKVELLKRVGETTRRWTALRKTTNEIGERLEKAEQEWEKLSDGLADLLSW  8421

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              ++ K   +  + P GG   AV +Q    +  +RE+++K     ST+E    FL +  L  
Sbjct  8422   VEAKKQAIMDEQPTGGSLSAVMQQASFVKGLQREIESKTANYKSTVEEAHSFLMQHDLRP  8601

Query  421    -------LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETL  473
                     L+  Y++      E+R + +   +    E +   W +L +    W + +   +
Sbjct  8602   KLHSPHVLDDDYEKEELANLEQRRRGLE--INANCERLKKNWAELGIEVESWDKLVQHAM  8775

Query  474    ERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVS  533
              +RLQEL+    E  L L  +E    + + V  + ++ L+   E+   +   I  ++  V 
Sbjct  8776   QRLQELERNLAECQLHLTSSENEIETMKAVEKIHLEDLKIAREETDQISKRIDEVRLFVD  8955

Query  534    HVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFL  593
               VND A +L    ++L  +    +E +N R+  L+ A+  R   +  A  DFGP S+HFL
Sbjct  8956   DVNDAAARLLAEDLKLDEHAKGQIEHVNKRYSTLKRAIRIRQAAVRNAASDFGPTSEHFL  9135

Query  594    STSVQGPWERAIS-PNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKL  652
              + SV  PW+RAIS  N +PYYI   ++ T W+HP   E+ + L+  N V+F AYRTAMKL
Sbjct  9136   NQSVTLPWQRAISKSNLLPYYIEQTSEKTQWEHPVWVEIVKELSQFNRVKFLAYRTAMKL  9315

Query  653    RRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLV-NV  711
              R LQK LCLDL+ L+    A  +      ++   +  ++  L  +Y+ L  ++ N V +V
Sbjct  9316   RALQKRLCLDLVDLTLLEKAFVRLKGLSAEECPGLEGMVCALLPMYEALHAKYPNQVQSV  9495

Query  712    PLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQ  771
               L VD+C+N+LLN++D  R G +RVLSFK  +I      LE+KYRYLFK V S  G   Q
Sbjct  9496   SLAVDICINFLLNLFDQSRDGIMRVLSFKIAMIVFSNIPLEEKYRYLFKLV-SQDGHATQ  9672

Query  772    RRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQS  831
              +++ LLL+D I IPR +GE A+FGG+N+EPSVRSCF+     P I    F+DW++ EPQS
Sbjct  9673   KQIALLLYDLIHIPRLVGESAAFGGTNVEPSVRSCFETVRLAPTISEGAFIDWVKKEPQS  9852

Query  832    MVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHK  891
              +VWL V+HR+  +E+ KH +KCN+CK  PIIG RYR L  FN D+CQ+CFFS R AK H+
Sbjct  9853   IVWLAVMHRLVISESTKHASKCNVCKMFPIIGIRYRCLTCFNCDLCQNCFFSQRTAKSHR  10032

Query  892    MHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET-PA  950
               ++PM EYC  TTS +D RDFAK+++NKFR     A   + GYLP+    EG  +   PA
Sbjct  10033  TNHPMQEYCEKTTSSDDARDFAKMIRNKFR-----ASKRQKGYLPIDVAEEGIPLTCPPA  10197

Query  951    SSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDS  1010
                   + +  ++      + LA++   +G               EH+             
Sbjct  10198  KVTNQATEQMNADTSQMTAHLAKLSAEHGG------------GAEHM------------E  10305

Query  1011   PLSQPRSPAQILISLESEERGELERILADLEEENRNLQA------------EYDRLKQQH  1058
              P+   +SP QI+  +E  +R E++++L  L+ EN+ L+             E DR  ++H
Sbjct  10306  PV---QSPLQIINQVEQLQRDEMDQMLHRLQFENKQLRKELEWKRGAASTMEIDRSSKRH  10476

Query  1059   EHK-------GLSPLPSPPEMMP-TSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHN  1110
              + +       G  PL +   ++   S QS  D  ++ EAK LR HK RLE R +ILE  N
Sbjct  10477  QERHQSESRGGTLPLRNGRSVVSLKSTQSQND--VMDEAKALRLHKQRLEHRSRILEQQN  10650

Query  1111   KQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEE  1170
              +QLE QL RL+++++  + +A ++       + SL R    QP       S ++ ++   
Sbjct  10651  EQLEMQLQRLKKVIDAQKQQAPLS-------TNSLLRGSHHQPWSPERARSGSASTLDRG  10809

Query  1171   DLLSP-----PQDTSTGLEEVMEQLNNSFPSSRGHNVG---SLFHMADDLGRAMESL-VS  1221
               ++S       +    G E+  ++   +    RG +VG   +L    DDLG+AMESL VS
Sbjct  10810  LIVSSRHQEQAEAAGGGAEDSSDEAGGAGGGPRGSSVGQMQNLMTACDDLGKAMESLVVS  10989

Query  1222   VMTDEEGAE  1230
              V+ D +  E
Sbjct  10990  VVYDSDDEE  11016


>dbj|AK013510.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched 
library, clone:2900010C03 product:dystrophin, muscular 
dystrophy, full insert sequence
Length=2135

 Score =  540 bits (1391),  Expect = 2e-150, Method: Compositional matrix adjust.
 Identities = 251/252 (99%), Positives = 251/252 (99%), Gaps = 0/252 (0%)
 Frame = +1

Query  615  NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
             HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  142  GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  321

Query  675  QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
            QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI
Sbjct  322  QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  501

Query  735  RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
            RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  502  RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  681

Query  795  GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
            GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  682  GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  861

Query  855  ICKECPIIGFRY  866
            ICKECPIIGFRY
Sbjct  862  ICKECPIIGFRY  897


>emb|CU688550.1| Synthetic construct Homo sapiens gateway clone IMAGE:100018376 
5' read DMD mRNA
Length=1227

 Score =  535 bits (1378),  Expect = 6e-149, Method: Compositional matrix adjust.
 Identities = 274/345 (79%), Positives = 286/345 (82%), Gaps = 10/345 (2%)
 Frame = +2

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  674
              HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD
Sbjct  35    GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD  214

Query  675   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  734
             QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI
Sbjct  215   QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI  394

Query  735   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  794
             RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF
Sbjct  395   RVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASF  574

Query  795   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  854
             GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN
Sbjct  575   GGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCN  754

Query  855   ICKECPIIGFRYRSLKHF-NYDICQSCFFS-GRVAKGHKMHYPMVEYCTP--TTSGEDVR  910
             IC+ECPI     +  K        QSCFF    + K  KM         P     G+  +
Sbjct  755   ICQECPIHWI*VQESKAL*LMTSAQSCFFFWSSLQKAIKMPLSHGGNNAPPDYLRGKKFQ  934

Query  911   DFAKVL-KNKF-RTKRYFAKH-PRMGYLP-VQTVL--EGDNMETP  949
             +FA+   KNKF + K YF K  P++ +L  VQ      G  M+TP
Sbjct  935   EFAQGN*KNKFSKPKGYFGKTPPKLAFLVQVQNCF*KGGTTMKTP  1069


>ref|XM_002116057.1| Trichoplax adhaerens hypothetical protein, mRNA
Length=2508

 Score =  508 bits (1307),  Expect = 1e-140, Method: Compositional matrix adjust.
 Identities = 267/743 (35%), Positives = 419/743 (56%), Gaps = 12/743 (1%)
 Frame = +1

Query  206   INASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  265
             IN   R  ++R+  RE  L +       F   LE  L WL   + T N    + +     
Sbjct  43    INFGLRLFNRRLKAREMRLLDAIDCFSNFNSHLENALIWLVGIDNTLNKFHSSVKTSS--  216

Query  266   EDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFK  325
              D   +K   + +Q+L+ EI+ H  +   + +   ++   L   D+  +L+ ++  +   
Sbjct  217   RDPIMIKYQEENYQNLRKEIQDHESIMSQIIKAGNRVNPDL-NEDEEKVLKDKIVKLQDD  393

Query  326   WSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQN  385
             W+ L++  ++I   +E    QW  L  +L++L  WL   +DEL+ + P+ GD  A+Q+QN
Sbjct  394   WARLQEDIIDIGVIIEEHCRQWNELQSNLRKLNEWLLQVNDELAAEEPLKGDLHALQQQN  573

Query  386   DVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLR  445
             +     +  L T +P++  TLE+  ++   Q     E  Y +  + P  E        L+
Sbjct  574   ENLLDIRSRLATHQPLVEETLESGSLYAKSQDDRTQEDQYGDIDQQPMVE--------LK  729

Query  446   KQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGD  505
                  +   W  ++  + DWQ  +D+T+    EL     E   +L   E  + SW    D
Sbjct  730   GLLALLGDRWNSVSKRADDWQTLLDKTILEFNELTSLMREAVSQLLSCEKKRLSWVSPRD  909

Query  506   LLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWK  565
             +  ++L   L+ +K+ R  I   + N+ ++  L   +   GI L+   +    D+N RW 
Sbjct  910   INSENLSSQLQDLKSFRESIQKNRPNIENIKRLYFSIGKKGITLNRVIIDQYSDINRRWA  1089

Query  566   LLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDH  625
              L  + + R+ +L E        S H    + + PWE++++ N VPYY+NHE + T WDH
Sbjct  1090  DLTRSEQIRIDELKEFRDTTTEVSHHQSEVTSKPPWEKSLTVNNVPYYVNHEKKVTQWDH  1269

Query  626   PKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK-QNDQP  684
             P+MTE+Y  L + N ++++AYRTAMKLR+LQK L L+ + L++   A     L+ +ND  
Sbjct  1270  PQMTEIYDLLVNNNFIKYAAYRTAMKLRKLQKCLFLNFIELNSLKTAFQDSGLRFKNDAY  1449

Query  685   MDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGII  744
             +DI  I   L  +Y+R+  +  +   +PL  D+ +NWLLNVYD  RTG+IR+LS + G++
Sbjct  1450  IDINDIYKLLNIVYERINNKKFSRKKIPLYKDLVVNWLLNVYDVPRTGKIRILSLRIGLV  1629

Query  745   SLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVR  804
              LC A LE+KYRY+F  +A   G  D+ RLGL LHD +QIPRQLGEVA+FGGSNIEPS+R
Sbjct  1630  ILCNAPLEEKYRYMFNLIARHDGCTDKARLGLFLHDCLQIPRQLGEVAAFGGSNIEPSIR  1809

Query  805   SCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGF  864
             SC +  N++  + +  FLDWM  EPQSMVWLPV+HR++AAE   HQ +C++CK     G 
Sbjct  1810  SCLETGNSEEFVGSVQFLDWMLAEPQSMVWLPVMHRISAAENVSHQTRCSVCKTAAFKGL  1989

Query  865   RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKR  924
             RYR L+ FN+D+CQ+CFF G   KGHK  + M EYC  +++G+D +DF K ++NK +TK 
Sbjct  1990  RYRCLECFNFDMCQACFFKGETCKGHKSSHQMQEYCLESSTGDDAKDFFKFVRNKLKTKS  2169

Query  925   YFAKHPRMGYLPVQTVLEGDNME  947
                +  ++GYLP+Q+V+EGD++E
Sbjct  2170  MRRRSRKLGYLPLQSVVEGDSVE  2238


>gb|BC060605.1| Mus musculus dystrophin related protein 2, mRNA (cDNA clone IMAGE:5719555), 
partial cds
Length=4416

 Score =  496 bits (1278),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 265/450 (58%), Positives = 334/450 (74%), Gaps = 20/450 (4%)
 Frame = +3

Query  758   LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIE  817
             LF QVA+S   CDQR LG LLH++IQ+PRQLGEVA+FGGSN+EPSVRSCF+F+  KP IE
Sbjct  2358  LFSQVANSGSQCDQRHLGALLHEAIQVPRQLGEVAAFGGSNVEPSVRSCFRFSTGKPVIE  2537

Query  818   AALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDIC  877
             A+ FL+W+ LEPQSMVWL VLHRV  AE  KHQ KC+IC++CPI GFRYRSLK FN DIC
Sbjct  2538  ASQFLEWVNLEPQSMVWLAVLHRVTIAEQVKHQTKCSICRQCPIKGFRYRSLKQFNVDIC  2717

Query  878   QSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPV  937
             Q+CF +GR +KG+K+HYP++EY TPTTS E++RDFA  LKNKFR+K+YF+KHP+ GYLPV
Sbjct  2718  QTCFLTGRASKGNKLHYPIMEYYTPTTSSENMRDFATTLKNKFRSKQYFSKHPQRGYLPV  2897

Query  938   QTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHL  997
             Q+VLE D  ETPASSP L H DTHSRIEH+ASRLAEME+ N S+ NDS+SP++SID++  
Sbjct  2898  QSVLESDCSETPASSPMLPHADTHSRIEHFASRLAEMESQNCSFFNDSLSPDDSIDEDQY  3077

Query  998   LIQHYCQSLNQDSPLSQPRSPA---QILISLESEERGELERILADLEEENRNLQAEYDRL  1054
             L++H        SP++  R PA   Q   S+ +E +GELE+ILA LE+ENR LQ E  RL
Sbjct  3078  LLRH-------SSPITD-REPAFGQQAPCSMATESKGELEKILAHLEDENRILQGELRRL  3233

Query  1055  KQQHEHKGLSP--LPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQ  1112
             K QHE    +P  +    E  P      R+ EL+AEA++LRQHK RLE RMQILEDHNKQ
Sbjct  3234  KWQHEEAAEAPTLVEGSAEATPDH----RNEELLAEARILRQHKSRLETRMQILEDHNKQ  3401

Query  1113  LESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDL  1172
             LESQL RLR+LL QP +E+  NG+  SS ++S ++S+ S P   R  G  T D+   +D+
Sbjct  3402  LESQLQRLRELLLQPPSESDGNGSAGSSLASSPRQSEGSHP---REKGQTTPDTEVADDV  3572

Query  1173  LSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
              S  QD S  LE++ME+L ++FPS R  +V
Sbjct  3573  GSKSQDVSLCLEDIMEKLRHAFPSVRSSDV  3662


 Score =  491 bits (1265),  Expect = 8e-136, Method: Compositional matrix adjust.
 Identities = 236/433 (54%), Positives = 318/433 (73%), Gaps = 0/433 (0%)
 Frame = +2

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E++KKS N+R+ LEA SD   +L L L+E++ WL  KD+ELS Q P+ GD   V
Sbjct  242   MNLCWNEIKKKSHNLRARLEAFSDLSGKLQLPLREIIDWLSQKDEELSAQLPLQGDVALV  421

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q++ + H AF  E+K+K P I S LE+ + FL++ P E LE+   E ++  P +R QN++
Sbjct  422   QQEKETHAAFMEEVKSKGPYISSVLESAQAFLSQHPFEELEESQSESKDTSPRQRIQNLS  601

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R I+ TLE L E+Q A +EL   L QAE ++ +W+
Sbjct  602   RFVWKQATVASELWEKLTARCVDQHRHIEHTLEHLLEIQGAMEELSSTLTQAEGVRATWE  781

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             P+GDL IDSL +H++ +K  + E +P+K+ V  VNDLA QL    + LS  N   LE +N
Sbjct  782   PIGDLFIDSLPEHIQAIKLFKEEFSPVKDGVKLVNDLAHQLAISDVHLSMENSRALEQIN  961

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
              RWK LQV+V +R++QL +AHRDFGP SQHFLSTSVQ PWERAISPNKVPYYINH+ QTT
Sbjct  962   IRWKQLQVSVAERLKQLQDAHRDFGPGSQHFLSTSVQVPWERAISPNKVPYYINHQAQTT  1141

Query  622   CWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN  681
             CWDHPKMTELYQ+LADLNN++FSAYRTAMKLRR+QKAL LDL++L+ A +  ++H+L+ +
Sbjct  1142  CWDHPKMTELYQTLADLNNIKFSAYRTAMKLRRVQKALRLDLVTLTTALEIFNEHDLQAS  1321

Query  682   DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             +  MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LNWLLNV+D+GR+G++R LSFKT
Sbjct  1322  EHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLNWLLNVFDSGRSGKMRALSFKT  1501

Query  742   GIISLCKAHLEDK  754
             GI  LC   +++K
Sbjct  1502  GIACLCGTEVKEK  1540


 Score = 50.1 bits (118),  Expect = 0.007, Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 27/232 (11%)
 Frame = +2

Query  21    ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
             E+ DWLS  D+ + +Q  + GD+  + +      A M++++ + P +  ++ +AQ   ++
Sbjct  344   EIIDWLSQKDEELSAQLPLQGDVALVQQEKETHAAFMEEVKSKGPYISSVLESAQAFLSQ  523

Query  81    TSNQEARTII-----TDRIERIQN--------------QWDEVQEHLQNRRQQLNEMLKD  121
                +E          T   +RIQN               W+++     ++ + +   L+ 
Sbjct  524   HPFEELEESQSESKDTSPRQRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIEHTLEH  703

Query  122   STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
               +   A EE    L QA     +W+  G   +D++ + I   K   ++    +  V + 
Sbjct  704   LLEIQGAMEELSSTLTQAEGVRATWEPIGDLFIDSLPEHIQAIKLFKEEFSPVKDGVKLV  883

Query  181   NDLALKL-LRDY--SADDTRKVHMITENINASWRSIHKRVSEREAALEETHR  229
             NDLA +L + D   S +++R +    E IN  W+ +   V+ER   L++ HR
Sbjct  884   NDLAHQLAISDVHLSMENSRAL----EQINIRWKQLQVSVAERLKQLQDAHR  1027


>emb|X99756.1| Ciona intestinalis mRNA for dystrophin
Length=1729

 Score =  454 bits (1167),  Expect = 2e-124, Method: Compositional matrix adjust.
 Identities = 246/548 (44%), Positives = 342/548 (62%), Gaps = 60/548 (10%)
 Frame = +1

Query  625   HPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQN-DQ  683
             HPKM EL +S+ DLN+VRF+AYRT+MKL+RLQKALCLDLL+L  A DA  QH L  + D 
Sbjct  1     HPKMAELMESMLDLNDVRFTAYRTSMKLQRLQKALCLDLLNLDTAIDAFTQHKLNISIDN  180

Query  684   P-----MDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLS  738
             P     +++L +I CLTTIYD LE+EH  LVNVPLCVDMCLNWLLNVYDT R+  I   S
Sbjct  181   PHVKDDVNVLDMITCLTTIYDALEREHKTLVNVPLCVDMCLNWLLNVYDTKRSSTISTRS  360

Query  739   FKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSN  798
             F TGI S+C +H+E+KY+Y+FKQ+    GF D+ +LG L+ D + IP+QLGE  +FGG N
Sbjct  361   FITGITSMCNSHIEEKYKYVFKQIGMPAGFTDRVKLGDLIKDFMLIPKQLGESEAFGGCN  540

Query  799   IEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKE  858
                SV SCFQ    +PEI+AA F+DWM+LEPQS+VWLPVLHR+ +AE   H A+C++C+ 
Sbjct  541   PHASVCSCFQLVGRRPEIDAAQFIDWMKLEPQSLVWLPVLHRLISAENVSHPARCSVCRS  720

Query  859   CPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKN  918
              PI+ FRYRSL+HF + ICQSCFFSGRVAK +K  YP+VEYCTPTTS E++RDF K+LKN
Sbjct  721   -PIV-FRYRSLRHFKHYICQSCFFSGRVAKNNKFCYPIVEYCTPTTSTENIRDFTKILKN  894

Query  919   KFRTKRYFAKHPRMGYLPVQT-------------VLEGDNMETPASSPQLSHDDTHSRIE  965
             K R K   AK  R+GYLPV+T             V++G + +          ++TH +IE
Sbjct  895   KLRKKSRSAK--RIGYLPVKTDDKEETNDDVTDDVIDGGSDDQTNGGA----NETHEKIE  1056

Query  966   HYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISL  1025
              YA  LA++++  G            +D+E   I  Y  +L +D      +SP    I  
Sbjct  1057  EYARILADLDDETGV--------QAPLDEEQECILEYRGALTED------KSPT---IFT  1185

Query  1026  ESEERGELERILADLEEENR----NLQAEYDR---LKQQHEHKGLSPLPSPPEMMPTSPQ  1078
               E+    +   +DL    R    N+     +   + +QH + G  P          S +
Sbjct  1186  HQEDIFSSKASGSDLPSPPRIKEVNVAIHESKPYSVAKQHNNAGNHP--------HVSSR  1341

Query  1079  SPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTV  1138
                  +L+ EAK+L+ H  R++ +M++LE+HN+ +++QL  L+ L+   +  ++ + + +
Sbjct  1342  LSNGPDLMIEAKILQHHSSRIDTQMKMLENHNESIKNQLQELKMLMNDSETSSEHSMSDI  1521

Query  1139  -SSPSTSL  1145
               SPS  +
Sbjct  1522  FESPSVHI  1545


>dbj|AK173384.1| Ciona intestinalis cDNA, clone:cieg020h09, full insert sequence
Length=1879

 Score =  252 bits (643),  Expect(2) = 8e-113, Method: Compositional matrix adjust.
 Identities = 120/203 (59%), Positives = 150/203 (73%), Gaps = 6/203 (2%)
 Frame = +2

Query  649  AMKLRRLQKALCLDLLSLSAACDALDQHNLKQN-DQP-----MDILQIINCLTTIYDRLE  702
            +MKL+RLQKALCLDLL+L  A DA  QH L  + D P     M++L +I CLTTIYD LE
Sbjct  2    SMKLQRLQKALCLDLLNLDTAVDAFTQHKLNISIDNPHVKDDMNVLDMITCLTTIYDALE  181

Query  703  QEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQV  762
            +EH  LVNVPLCVDMCLNWLLNVYDT R+  I   SF TGI S+C + +E+KY+Y+F+Q+
Sbjct  182  REHKTLVNVPLCVDMCLNWLLNVYDTRRSSTISTRSFITGITSMCNSPIEEKYKYVFQQI  361

Query  763  ASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFL  822
                GF D+ +LG L+ D + IP+QLGE  +FGG N   SV SCFQ    +PEI+AA F+
Sbjct  362  GMPAGFTDRVKLGDLIKDFMLIPKQLGESEAFGGCNPHASVCSCFQLVGRRPEIDAAQFI  541

Query  823  DWMRLEPQSMVWLPVLHRVAAAE  845
            DWM+LEPQS+VWLPVLHR+ +AE
Sbjct  542  DWMKLEPQSLVWLPVLHRLISAE  610


 Score =  186 bits (471),  Expect(2) = 8e-113, Method: Compositional matrix adjust.
 Identities = 112/290 (38%), Positives = 165/290 (56%), Gaps = 39/290 (13%)
 Frame = +1

Query  849   HQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGED  908
             H A+C++C+ECPI+GFRYRSL+HF +DICQSCFFSGRVAK +K  YP+VEYCTPTTS E+
Sbjct  619   HPARCSVCRECPIVGFRYRSLRHFKHDICQSCFFSGRVAKNNKFCYPIVEYCTPTTSTEN  798

Query  909   VRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASS-------------PQL  955
             +RDF K+LKNK R K   AK  R+GYLPV+T    D+ E P                   
Sbjct  799   IRDFTKILKNKLRNKSRSAK--RIGYLPVKT----DDKEDPNDDGTNDVIDGGIDDQTNG  960

Query  956   SHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQP  1015
               ++TH +IE YA  LA++++  G      + P   +D+E   I  YC +L +D   +  
Sbjct  961   GANETHEKIEEYARILADLDDETG------VQP--PLDEEQECILEYCGALTEDKSPTIF  1116

Query  1016  RSPAQILISLESEERGELERILADLEEENRNLQ-AEYDRLKQQHEHKGLSPLPSPPEMMP  1074
                  I  S  S  R +L      ++E N  +  ++   + +QH   G  P  S    + 
Sbjct  1117  THQEDIFSSKAS--RSDLPS-PPRIKEVNVAIHDSKAYSVAKQHNDAGNQPHVS--SRLS  1281

Query  1075  TSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLL  1124
               P      +L+ EAK+L+ H  R++ +M++LE+HN+ +++QL  L+ L+
Sbjct  1282  NGP------DLMIEAKILQHHSSRIDTQMKMLENHNESIKNQLQELKMLM  1413


>gb|EZ022163.1| TSA: Acropora millepora SeqIndex3528, mRNA sequence
Length=1268

 Score =  342 bits (876),  Expect = 1e-90, Method: Compositional matrix adjust.
 Identities = 165/383 (43%), Positives = 249/383 (65%), Gaps = 11/383 (2%)
 Frame = +1

Query  601   WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
             WER+ + N +PYYINHET+TT WDHP+M  L + +  L+N++++AYRTAMKLR +QK   
Sbjct  94    WERSETTNGIPYYINHETETTQWDHPEMISLMEEIEGLSNIKYAAYRTAMKLRTIQKKTQ  273

Query  661   LDLLSLSAACDALDQHNLKQN--DQPMDILQIINCLTTIYDRLEQEHNN-LVNVPLCVDM  717
             L L+ L  A  +L +  +K    +  +   ++   +T I+     + N+ L++V L  ++
Sbjct  274   LYLVDLRVAKASLVEEGIKDGYIEGNLSTAEVHKIITAIFINQTGDRNSQLIDVSLASEL  453

Query  718   CLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLL  777
              LNW+LNVYD GR G + +LS K G+  +    +++KYRYLF Q +++ GF D +RL L 
Sbjct  454   VLNWILNVYDPGRMGFVPILSLKVGLAVMSSEKVQEKYRYLFSQFSNNHGFLDSKRLKLF  633

Query  778   LHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPV  837
             L + +QIP+ + E ASF GS++EP+VR+C +  +    +    F++WM  EPQ++VWLP 
Sbjct  634   LQEMLQIPKHIYESASFSGSSVEPAVRNCLEGVSIPERVSFEEFIEWMIAEPQTVVWLPT  813

Query  838   LHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMV  897
             LHR+A +ET KH+AKCN+CK  PI+GFRYR LK FN+D+CQ CF+SGRV+K HK+ +P  
Sbjct  814   LHRLAVSETVKHEAKCNVCKMYPIVGFRYRCLKCFNFDLCQGCFWSGRVSKQHKIGHPTQ  993

Query  898   EYCTPTTSGEDVRDFAKVLKNKFRTKRYFA--KHPRMG-YLPV----QTVLEGDNMETP-  949
             EYC  +T  ED++DFAKV++NK   K+     +HP  G ++P+        EG+  ++  
Sbjct  994   EYCLVSTQKEDIKDFAKVMRNKVSKKKKKKTPEHPSKGRFIPIDMEDAAPSEGEYEDSVD  1173

Query  950   ASSPQLSHDDTHSRIEHYASRLA  972
               S   +   TH ++E YA+RLA
Sbjct  1174  VGSAVKAFPGTHDKLESYAARLA  1242


>emb|CU688551.1| Synthetic construct Homo sapiens gateway clone IMAGE:100018376 
3' read DMD mRNA
Length=1192

 Score =  328 bits (841),  Expect = 1e-86, Method: Compositional matrix adjust.
 Identities = 187/255 (73%), Positives = 198/255 (77%), Gaps = 17/255 (6%)
 Frame = -2

Query  985   SISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEEN  1044
             SISP ESID E L  QH CQSLNQDSPLSQP SPAQILISLESEERG         E  +
Sbjct  759   SISPYESIDGELL*FQHSCQSLNQDSPLSQPCSPAQILISLESEERG------GARENPS  598

Query  1045  RNLQAEYDRLKQQHEHKGLSPLPSP-PEMMPT---SPQSPRDAELIAEAKLLRQH-----  1095
             R+   + +   +    K  +    P P  +P+    P  PR   +++   LLR       
Sbjct  597   RS*GRKQESASRI*PSKAAART*RPVPTAVPS*NECPPLPRVPGMLS--SLLRPSYCVNT  424

Query  1096  KGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPML  1155
             KGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPML
Sbjct  423   KGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPML  244

Query  1156  LRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGRA  1215
             LRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGRA
Sbjct  243   LRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGRA  64

Query  1216  MESLVSVMTDEEGAE  1230
             MESLVSVMTDEEGAE
Sbjct  63    MESLVSVMTDEEGAE  19


>ref|XM_001256720.2| PREDICTED: Bos taurus similar to dystrophin Dp260-1 (LOC790177), 
partial mRNA
Length=462

 Score =  320 bits (821),  Expect = 3e-84, Method: Compositional matrix adjust.
 Identities = 150/152 (98%), Positives = 151/152 (99%), Gaps = 0/152 (0%)
 Frame = +1

Query  658  ALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDM  717
            AL +DLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDM
Sbjct  7    ALAVDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDM  186

Query  718  CLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLL  777
            CLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLL
Sbjct  187  CLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLL  366

Query  778  LHDSIQIPRQLGEVASFGGSNIEPSVRSCFQF  809
            LHDSIQIPRQLGEVASFGGSNIEPSVRSCFQF
Sbjct  367  LHDSIQIPRQLGEVASFGGSNIEPSVRSCFQF  462


>ref|XM_001637080.1| Nematostella vectensis predicted protein (NEMVEDRAFT_v1g93170) 
partial mRNA
Length=948

 Score =  315 bits (808),  Expect = 7e-83, Method: Compositional matrix adjust.
 Identities = 143/316 (45%), Positives = 213/316 (67%), Gaps = 7/316 (2%)
 Frame = +1

Query  616  HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQ  675
            HET+ T WDHP M +L Q LA+LNN++++AYRTAMKLR + K   L L+ +      LD+
Sbjct  1    HETEKTQWDHPAMIQLMQDLAELNNIKYAAYRTAMKLRAIHKKTQLYLVEIPILTATLDE  180

Query  676  HNL--KQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGR  733
             ++     ++ + I +    +T ++     +  + +++P+  D+ LN +LN+YD GRTG 
Sbjct  181  EDVPDGYTEKALSIPEASKIITALFINQNGDRQDFIDIPMASDLTLNLMLNIYDPGRTGY  360

Query  734  IRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVAS  793
            I+ LS K GI  LC A L+DKYRYLF+Q+ +S    D++RL L L + +QIP+ + E   
Sbjct  361  IQALSLKIGISLLCAAKLQDKYRYLFRQMCNSRAVLDRKRLTLFLQECLQIPKYIYESTI  540

Query  794  FGGSNIEPSVRSCFQFANNKPEIEAAL-----FLDWMRLEPQSMVWLPVLHRVAAAETAK  848
            F G+++EP+V++CF+  +    +E  L     F++WM  EPQ++VWLP LHR+A +ET K
Sbjct  541  FSGTSVEPAVKNCFETVSFTYTLEVELQKFKSFMEWMVAEPQTIVWLPTLHRLAVSETVK  720

Query  849  HQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGED  908
            H+AKCNICK  PI+GFRYR LK FN+D+CQ CF++GRV+KGHK+ +P  EYC   +  ED
Sbjct  721  HEAKCNICKMYPIVGFRYRCLKCFNFDLCQGCFWAGRVSKGHKIGHPTQEYCLAPSQKED  900

Query  909  VRDFAKVLKNKFRTKR  924
            ++DFAKV++NK   K+
Sbjct  901  IKDFAKVMRNKVSKKK  948


>ref|XM_002237128.1| Branchiostoma floridae hypothetical protein (BRAFLDRAFT_129067) 
mRNA, complete cds
Length=2067

 Score =  312 bits (799),  Expect = 8e-82, Method: Compositional matrix adjust.
 Identities = 181/489 (37%), Positives = 271/489 (55%), Gaps = 59/489 (12%)
 Frame = +1

Query  638   LNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK-QNDQPMDILQIINCLTT  696
             LN+++++AYR AMKLR +QK   L  + L       ++HNL+   D  +D++ + + ++ 
Sbjct  28    LNDIKYAAYRMAMKLRAVQKICDLHFVDLKTVVSVFERHNLRGHRDSVVDVMDLYDIISD  207

Query  697   IYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYR  756
             I+    ++  + +++ L  D+ LNW+LNVYDT RTG IRV S K G++ LC   L +KY 
Sbjct  208   IFVMSNKDRPDFIDIELASDLTLNWILNVYDTNRTGCIRVPSVKVGLVVLCSGLLSEKYT  387

Query  757   YLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEI  816
             YLF+  +  +G   ++ L  LL D +Q+  QL E  SFG  ++   V SC +        
Sbjct  388   YLFQLFSDHSGMMSRKSLSGLLQDMLQMTDQLYERPSFG--SVSAGVASCLEGTLGTGVT  561

Query  817   EAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDI  876
             E   FL W+  EPQ++VWLP LHRVA+AE+ KHQAKCNICK CPI+GFRYR LK +NYD+
Sbjct  562   EDH-FLQWLMAEPQTVVWLPTLHRVASAESVKHQAKCNICKVCPILGFRYRCLKCYNYDL  738

Query  877   CQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLP  936
             CQ+CFF GR ++ HK+ +P+ EYCT T+S ED + FA+ ++N   TKRY  K  +  +LP
Sbjct  739   CQNCFFVGRSSRSHKLSHPIQEYCTQTSSKEDAKAFARTVRNNV-TKRYKKKKNKSNFLP  915

Query  937   VQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEH  996
             V    E D   T + +   S  D H  +   A+RLA+ME+        S+ P +      
Sbjct  916   VHGYREDD---TDSLADTQSEADMHGMLGRLATRLADMES--------SLPPTK------  1044

Query  997   LLIQHYCQSLNQDSP----LSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYD  1052
                        Q SP      +P  P Q++++L  EER ELE I+ DLE E  +L  + +
Sbjct  1045  ------VSRPQQTSPKLMQRQRPSPPEQVVVNLAPEERLELEDIIHDLEAEKDDLLDDIN  1206

Query  1053  RLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQ  1112
              ++ Q    G                            +++  + RL+A++++LE HN+Q
Sbjct  1207  EMRTQRSEAG---------------------------SVIQDEQERLQAQVEVLESHNRQ  1305

Query  1113  LESQLHRLR  1121
             LE QL + R
Sbjct  1306  LELQLEKYR  1332


>ref|XM_696118.3| PREDICTED: Danio rerio similar to putative utrophin (LOC572406), 
partial mRNA
Length=7901

 Score =  302 bits (774),  Expect = 7e-79, Method: Compositional matrix adjust.
 Identities = 164/393 (41%), Positives = 261/393 (66%), Gaps = 2/393 (0%)
 Frame = +1

Query  13    ADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELIT  72
             ++ ++  TEL DWL L+ Q++KS  V +GD ++I   I + + T  DLEQR PQLE++IT
Sbjct  6604  SELHQTATELADWLLLIHQMLKSNIVTLGDKDEIRTTIGRLQVTKGDLEQRHPQLEDIIT  6783

Query  73    AAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEA  132
              AQN+KNKTSN + RT I++++E++++QWD  Q  ++ R  QL+ M+  S QW E + + 
Sbjct  6784  LAQNIKNKTSNLDVRTSISEKLEKVRSQWDSTQHGVETRLLQLDHMIGHSDQWEEQRRKV  6963

Query  133   EQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS  192
             + ++GQ   +L +  +   + + + K+I++ K   ++L + Q +V   N+L+ +LL+DY+
Sbjct  6964  KALIGQNELRLNNLLQ--QSREPLTKQISDNKAFLQELSRGQESVSAFNELSNQLLQDYA  7137

Query  193   ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA  252
              DDTRKV  + +  N SW SI+ R S+R+AAL+   + +Q    +LE FL WL E+ETT 
Sbjct  7138  NDDTRKVKEVMDTHNNSWNSINNRASDRQAALDLDLKSVQTSLRELELFLKWLHESETTV  7317

Query  253   NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDA  312
             NVL DA ++E L +DS   K+L  Q +D+Q EIEAH DV+ +++ N  K++++L  S++A
Sbjct  7318  NVLSDAAQREGLSQDSAHNKQLKSQLEDIQAEIEAHNDVFRSVEGNKLKMVKALGSSEEA  7497

Query  313   VLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQA  372
             V LQ+RLD+MN +WS+L+ KS NIR+HLEAS+++W RL   L++L  W+ LKD+EL++Q 
Sbjct  7498  VFLQQRLDDMNQRWSDLKAKSANIRAHLEASAERWNRLLSVLEDLSRWIGLKDEELNKQM  7677

Query  373   PIGGDFPAVQKQNDVHRAFKRELKTKEPVIMST  405
             PIGGD P + +Q       + E++    V  S 
Sbjct  7678  PIGGDVPTLLQQQTHGMDIQAEIEAHNDVFRSV  7776


 Score = 69.7 bits (169),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 139/314 (44%), Gaps = 42/314 (13%)
 Frame = +1

Query  44    EDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDE  103
             E + + I   KA +Q+L + +  +      +  L    +N + R +  + ++   N W+ 
Sbjct  7021  EPLTKQISDNKAFLQELSRGQESVSAFNELSNQLLQDYANDDTRKV-KEVMDTHNNSWNS  7197

Query  104   VQEHLQNRRQQLNEMLKDST----------QWLEAKEEAEQVLGQARAKLESWKEGPYTV  153
             +     +R+  L+  LK             +WL   E    VL  A     + +EG    
Sbjct  7198  INNRASDRQAALDLDLKSVQTSLRELELFLKWLHESETTVNVLSDA-----AQREG----  7350

Query  154   DAIQKKITETKQLAKDLRQWQTNVDVANDL-------ALKLLRDY-SADDTRKVHMITEN  205
               + +     KQL   L   Q  ++  ND+        LK+++   S+++   +    ++
Sbjct  7351  --LSQDSAHNKQLKSQLEDIQAEIEAHNDVFRSVEGNKLKMVKALGSSEEAVFLQQRLDD  7524

Query  206   INASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  265
             +N  W  +  + +   A LE +     +    LE    W+   +   N         + +
Sbjct  7525  MNQRWSDLKAKSANIRAHLEASAERWNRLLSVLEDLSRWIGLKDEELN---------KQM  7677

Query  266   EDSKGVKELMKQ---WQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNM  322
                  V  L++Q     D+Q EIEAH DV+ +++ N  K++++L GS++AV LQ+RLD+M
Sbjct  7678  PIGGDVPTLLQQQTHGMDIQAEIEAHNDVFRSVEGNKLKMVKALGGSEEAVFLQQRLDDM  7857

Query  323   NFKWSELRKKSLNI  336
             N +WS+L+ KS NI
Sbjct  7858  NQRWSDLKAKSANI  7899


>gb|EZ014006.1| TSA: Acropora millepora SeqIndex16792, mRNA sequence
Length=1833

 Score =  189 bits (481),  Expect(2) = 3e-78, Method: Compositional matrix adjust.
 Identities = 117/222 (52%), Positives = 157/222 (70%), Gaps = 15/222 (6%)
 Frame = +2

Query  904   TSGEDVRDFAKVLKNKFRTKRYFAKHPR-MGYLPVQTVLEGDNMETPA-SSPQ--LSHDD  959
              SGEDV DF  +++NKF+ +RY  K PR +GYLP+QTV+EG N+ETP+  SPQ  ++H+ 
Sbjct  266   NSGEDVLDFFAMVRNKFKKRRYKNKPPRKLGYLPIQTVMEGGNLETPSMPSPQQNVNHE-  442

Query  960   THSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPA  1019
              H+R+  +A RLAE E+  GS  +       S+D+EH LI  YCQSL  D+    P+SP 
Sbjct  443   VHNRLGMFAHRLAEAESEGGSKYDP-----HSLDEEHQLIAQYCQSLKSDT-TEAPKSPT  604

Query  1020  QILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQS  1079
             QI+++L++ E+ +LE  L  LEEENR+LQ EY+RL+   +    S  PS  +  P  PQ+
Sbjct  605   QIVMALDAVEKDDLEAELLKLEEENRDLQEEYERLRSIRDQ---SLPPSDSDTSPGGPQN  775

Query  1080  PRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLR  1121
              RD+EL+AEAKLLRQHKGRLEARMQ+LEDHN+QLE+QL RLR
Sbjct  776   -RDSELLAEAKLLRQHKGRLEARMQVLEDHNRQLEAQLQRLR  898


 Score =  132 bits (333),  Expect(2) = 3e-78, Method: Compositional matrix adjust.
 Identities = 56/89 (62%), Positives = 73/89 (82%), Gaps = 0/89 (0%)
 Frame = +3

Query  816  IEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYD  875
            I+ A FL W+ +EPQS+VWLP LHR+AA+E  KH+AKC+ICKE PI+GFR+R LK FNYD
Sbjct  3    IDCAQFLVWLSVEPQSIVWLPTLHRLAASEAVKHKAKCSICKEYPIVGFRFRCLKCFNYD  182

Query  876  ICQSCFFSGRVAKGHKMHYPMVEYCTPTT  904
            +CQSCF+SGRV+  H++ +PM +YC  TT
Sbjct  183  LCQSCFWSGRVSHEHRLTHPMHQYCLSTT  269


 Score = 46.6 bits (109),  Expect = 0.077, Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 3/49 (6%)
 Frame = +3

Query  1183  LEEVMEQLNNSFPSSR--GHNVGSLFHMADDLGRAMESLVSVMT-DEEG  1228
             L+EVM ++N+SFP+ +     VG LF  A D+ +A+ESLV VMT D+EG
Sbjct  1140  LKEVMSKINSSFPADQQNADPVGHLFATAKDVNKAVESLVQVMTSDDEG  1286


>ref|XM_002189011.1| PREDICTED: Taeniopygia guttata similar to dystrophin Dp71c (LOC100218005), 
mRNA
Length=549

 Score =  299 bits (765),  Expect = 7e-78, Method: Compositional matrix adjust.
 Identities = 146/154 (94%), Positives = 152/154 (98%), Gaps = 0/154 (0%)
 Frame = +1

Query  1046  NLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQI  1105
             NLQAEYDRLKQQHEHKGLSPLPSPPEMMP SPQSPRDAELIAEAKLLRQHKGRLEARMQI
Sbjct  28    NLQAEYDRLKQQHEHKGLSPLPSPPEMMPVSPQSPRDAELIAEAKLLRQHKGRLEARMQI  207

Query  1106  LEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSD  1165
             LEDHNKQLESQLHRLRQLLEQPQA+AKVNGTT+SSPSTSLQRS SSQPMLLRVVGSQTS+
Sbjct  208   LEDHNKQLESQLHRLRQLLEQPQADAKVNGTTLSSPSTSLQRSGSSQPMLLRVVGSQTSE  387

Query  1166  SMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG  1199
             +MGE++LLSPPQDTSTGLEEVMEQLNNSFPSSRG
Sbjct  388   TMGEDELLSPPQDTSTGLEEVMEQLNNSFPSSRG  489


>gb|AY566609.1| Canis familiaris dystrophin Dp71 isoform (DMD) mRNA, partial 
cds
Length=468

 Score =  288 bits (737),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 134/135 (99%), Positives = 135/135 (100%), Gaps = 0/135 (0%)
 Frame = +2

Query  616  HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQ  675
            HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQ
Sbjct  62   HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQ  241

Query  676  HNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIR  735
            HNLKQNDQPMDILQ+INCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIR
Sbjct  242  HNLKQNDQPMDILQVINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIR  421

Query  736  VLSFKTGIISLCKAH  750
            VLSFKTGIISLCKAH
Sbjct  422  VLSFKTGIISLCKAH  466


>ref|XM_002237465.1| Branchiostoma floridae hypothetical protein (BRAFLDRAFT_137716) 
mRNA, partial cds
Length=969

 Score =  279 bits (714),  Expect = 7e-72, Method: Compositional matrix adjust.
 Identities = 143/333 (42%), Positives = 209/333 (62%), Gaps = 14/333 (4%)
 Frame = +1

Query  614  INHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDAL  673
             +H+T+ T WDHP + E  + L  LN+++++AYR AMKLR +QK   L  + L       
Sbjct  7    FSHQTERTQWDHPLLAETLEQLDGLNDIKYAAYRMAMKLRAVQKRCDLHFVDLKTVVSVF  186

Query  674  DQHNLKQN-DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTG  732
            ++HNL+ + D  +D++ + + ++ I+    ++  + +++ L  D+ LNW+LNVYDT RTG
Sbjct  187  ERHNLRSHRDSVVDVMDLYDIISDIFVMSNKDRPDFIDIELASDLTLNWILNVYDTNRTG  366

Query  733  RIRVLSFKTGIISLCKAHLEDKYRY-LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEV  791
             IRV S K G++ LC   L +  R  LF+Q +  +G   ++ L  LL D +Q+  QL E 
Sbjct  367  CIRVPSVKVGLVVLCSGLLSENTRVNLFQQFSDHSGMMSRKSLSGLLQDMLQVRNQLYER  546

Query  792  ASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQA  851
             SFG  ++   V SC         +E   FL W+  EPQ++VWLP LHRVA+AE+ KHQA
Sbjct  547  PSFG--SVSAGVASC---------LEGDHFLQWLMAEPQTLVWLPTLHRVASAESVKHQA  693

Query  852  KCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRD  911
            KCNICK CPI+GFRYR LK +NYD+CQ+CFF GR ++ HK+ +P+ EYCT T+S ED + 
Sbjct  694  KCNICKVCPILGFRYRCLKCYNYDLCQNCFFVGRSSRSHKLSHPIQEYCTQTSSKEDAKA  873

Query  912  FAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGD  944
            FA+ ++N   TKRY  K  +  +LPV    E D
Sbjct  874  FARTVRNNV-TKRYKKKKNKSNFLPVHGYREDD  969


>dbj|AB011666.1| Rattus norvegicus mRNA for utrophin, partial cds
Length=506

 Score =  257 bits (657),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 121/168 (72%), Positives = 138/168 (82%), Gaps = 0/168 (0%)
 Frame = +1

Query  617  ETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQH  676
            +TQTTCWDHPKMTEL+QSL DLNNVRFSAYRTA+K+RRLQK LCLDLL L+   +   QH
Sbjct  1    QTQTTCWDHPKMTELFQSLGDLNNVRFSAYRTAIKIRRLQKTLCLDLLELNTTNEVFKQH  180

Query  677  NLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRV  736
             L QNDQ + +  +INCLTT YD LEQ H +LVNVPLCVDMCLNWLLNVYDTGRTG+IRV
Sbjct  181  KLNQNDQLLSVPDVINCLTTTYDGLEQLHKDLVNVPLCVDMCLNWLLNVYDTGRTGKIRV  360

Query  737  LSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQI  784
             S K G++SL K  LE+KYR LFK+VA  T  CDQR+LGLLLHD+IQI
Sbjct  361  QSLKIGLMSLSKGLLEEKYRCLFKEVAGPTEMCDQRQLGLLLHDAIQI  504


>gb|DQ831005.1| Danio rerio G-utrophin pseudogene mRNA, partial sequence
Length=532

 Score =  246 bits (628),  Expect = 6e-62, Method: Composition-based stats.
 Identities = 106/144 (73%), Positives = 125/144 (86%), Gaps = 0/144 (0%)
 Frame = +2

Query  816  IEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYD  875
            IE   F+DWM LEPQSMVWLPVLHRV AAETAKHQAKCNICKECP++GFRYRSLKHFNY+
Sbjct  92   IELQQFVDWMHLEPQSMVWLPVLHRVTAAETAKHQAKCNICKECPMVGFRYRSLKHFNYN  271

Query  876  ICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYL  935
            +CQ+CFFSGR++K H +  PMVEYCTPTTSGEDVRDF KVLKNKFR+K+YF KHPR+GYL
Sbjct  272  VCQTCFFSGRISKDHHLSDPMVEYCTPTTSGEDVRDFTKVLKNKFRSKKYFTKHPRLGYL  451

Query  936  PVQTVLEGDNMETPASSPQLSHDD  959
            PVQT+LE ++ +TP +   +  +D
Sbjct  452  PVQTILEEEHSDTPVAFVSMCPED  523


 Score = 44.7 bits (104),  Expect = 0.35, Method: Composition-based stats.
 Identities = 21/24 (87%), Positives = 23/24 (95%), Gaps = 0/24 (0%)
 Frame = +1

Query  637  DLNNVRFSAYRTAMKLRRLQKALC  660
            DL++VRFSAYRTAMK RRLQKALC
Sbjct  1    DLSHVRFSAYRTAMKSRRLQKALC  72


>dbj|AK034383.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length 
enriched library, clone:9330185F14 product:inferred: dystrophin-related 
protein 2 A-form splice variant {Rattus norvegicus}, 
full insert sequence
Length=1541

 Score =  245 bits (626),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 128/274 (46%), Positives = 180/274 (65%), Gaps = 0/274 (0%)
 Frame = +3

Query  322   MNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
             MN  W+E++KKS N+R+ LEA SD   +L L L+E++ WL  KD+ELS Q P+ GD   V
Sbjct  414   MNLCWNEIKKKSHNLRARLEAFSDLSGKLQLPLREIIDWLSQKDEELSAQLPLQGDVALV  593

Query  382   QKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVT  441
             Q++ + H AF  E+K+K P I S LE+ + FL++ P E LE+   E ++  P +R QN++
Sbjct  594   QQEKETHAAFMEEVKSKGPYISSVLESAQAFLSQHPFEELEESQSESKDTSPRQRIQNLS  773

Query  442   RLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQ  501
             R + KQA   +  WEKL     D  R I+ TLE L E+Q A +EL   L QAE ++ +W+
Sbjct  774   RFVWKQATVASELWEKLTARCVDQHRHIEHTLEHLLEIQGAMEELSSTLTQAEGVRATWE  953

Query  502   PVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLN  561
             P+GDL IDSL +H++ +K  + E +P+K+ V  VNDLA QL    + LS  N   LE +N
Sbjct  954   PIGDLFIDSLPEHIQAIKLFKEEFSPVKDGVKLVNDLAHQLAISDVHLSMENSRALEQIN  1133

Query  562   TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLST  595
              RWK LQV+V +R++QL +AHRDFGP SQHFLS+
Sbjct  1134  IRWKQLQVSVAERLKQLQDAHRDFGPGSQHFLSS  1235


 Score = 48.9 bits (115),  Expect = 0.016, Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 27/232 (11%)
 Frame = +3

Query  21    ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
             E+ DWLS  D+ + +Q  + GD+  + +      A M++++ + P +  ++ +AQ   ++
Sbjct  516   EIIDWLSQKDEELSAQLPLQGDVALVQQEKETHAAFMEEVKSKGPYISSVLESAQAFLSQ  695

Query  81    TSNQEARTII-----TDRIERIQN--------------QWDEVQEHLQNRRQQLNEMLKD  121
                +E          T   +RIQN               W+++     ++ + +   L+ 
Sbjct  696   HPFEELEESQSESKDTSPRQRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIEHTLEH  875

Query  122   STQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
               +   A EE    L QA     +W+  G   +D++ + I   K   ++    +  V + 
Sbjct  876   LLEIQGAMEELSSTLTQAEGVRATWEPIGDLFIDSLPEHIQAIKLFKEEFSPVKDGVKLV  1055

Query  181   NDLALKL-LRDY--SADDTRKVHMITENINASWRSIHKRVSEREAALEETHR  229
             NDLA +L + D   S +++R +    E IN  W+ +   V+ER   L++ HR
Sbjct  1056  NDLAHQLAISDVHLSMENSRAL----EQINIRWKQLQVSVAERLKQLQDAHR  1199


>ref|XM_002114182.1| Trichoplax adhaerens hypothetical protein, mRNA
Length=1203

 Score =  243 bits (620),  Expect = 5e-61, Method: Compositional matrix adjust.
 Identities = 126/331 (38%), Positives = 198/331 (59%), Gaps = 8/331 (2%)
 Frame = +1

Query  615   NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKAL-CLDLLSLSAACDAL  673
             +H+T  T WDHP  T++ + +  LN ++F+AYRTA+K+R +Q+    ++ L L +  D L
Sbjct  16    SHKTCRTQWDHPTTTDILREIDQLNYIKFAAYRTAIKMRIIQQRFDKVEFLRLLSVFDQL  195

Query  674   DQHNLKQND----QPMDILQIINCLTTIYDRLEQEHN-NLVNVPLCVDMCLNWLLNVYDT  728
                  + +D    Q M++L + N L  ++ +    ++  L N  L  D+ LN+ LN++D 
Sbjct  196   GYGTQQSSDDDEVQDMNVLDLENILVKLFSQPTLANDIELANPLLSTDLALNFALNIFDR  375

Query  729   GRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQL  788
              R+G++++ + K  +  +CK +L DKY++LFK +A+   F +   L  LL   +QI   +
Sbjct  376   DRSGKLKLTAIKIFLTVMCKGYLRDKYQFLFKLIANRGKFANAEGLESLLSQLMQIVSYI  555

Query  789   GEVASFGG-SNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETA  847
              E  SFGG  +I+ +V++C+  A +   I+   F  W+  EPQ++VWL  + RV AAE  
Sbjct  556   KEDPSFGGIHSIQNAVKNCYDKAAHPSVIKEEEFTQWVLEEPQTIVWLSTMERVIAAENV  735

Query  848   KHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGE  907
              H  KC ICK+ PI+G R++SLK FN+DICQ+CF SG+  K HK   P  EYC  TTS E
Sbjct  736   VHDVKCGICKKTPIVGLRFKSLKKFNFDICQNCFLSGKSGKHHKAGDPTQEYCVATTSKE  915

Query  908   DVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQ  938
              V+DFA+  +NK  TKRY  K  +  Y+ ++
Sbjct  916   GVKDFARTFRNKV-TKRYKRKAAKPRYICIE  1005


>gb|DQ431250.1| Schistosoma mansoni dystrophin mRNA, partial cds
Length=3834

 Score =  232 bits (591),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 99/229 (43%), Positives = 145/229 (63%), Gaps = 16/229 (6%)
 Frame = +3

Query  711   VPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCD  770
             V +CVD+ LNWLLNVYD  R G IRVLSFK  +  +  A+L++KYRYLF  ++   G  D
Sbjct  921   VNVCVDLILNWLLNVYDRMRCGTIRVLSFKVALALMSMANLDEKYRYLFSLISDRDGCVD  1100

Query  771   QRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQ----------------FANNKP  814
             ++RLG LL++ + IPR LGE   FG  +    V++CFQ                  ++KP
Sbjct  1101  EQRLGALLYECVLIPRNLGETGQFGNEDFNQYVKTCFQQVLEISKHSDKIDGTLTYHSKP  1280

Query  815   EIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNY  874
                   FL W+RL PQ + WLP+LHR+A +E   H  +C +C   P+IG RYR L+  N+
Sbjct  1281  SARIVHFLTWLRLNPQMLTWLPLLHRLALSEQVIHHIRCTVCHNQPLIGLRYRCLRCLNF  1460

Query  875   DICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTK  923
             D+CQ CFF+GR ++ HK+ +PM EYC+ +TS +  +DF ++++N+FR++
Sbjct  1461  DMCQQCFFAGRTSRNHKLTHPMQEYCSHSTSTDSFKDFTRIVRNRFRSR  1607


 Score = 99.0 bits (245),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 58/139 (41%), Positives = 79/139 (56%), Gaps = 18/139 (12%)
 Frame = +3

Query  596  SVQGPWERAISPN--KVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLR  653
            SV+ PWER + P+  +VPYY NHETQ T WDHP + +L +S+   N VRFS YRT +KLR
Sbjct  3    SVRLPWERCVHPSGTQVPYYKNHETQETQWDHPILCDLMKSMKQFNTVRFSDYRTGLKLR  182

Query  654  RLQKALCLDLLSLSAACDALDQHNLKQN-DQPMDILQIINCLTTIYDRLEQEHNNLVNVP  712
            RLQK LC D +S+S   + L      Q    PM   Q     T  +DR       +++VP
Sbjct  183  RLQKELCFDSISISIVAECLKHIGHSQTLSNPMLGQQT----TDPFDR-------MISVP  329

Query  713  LCVDMCLNWLLNVYDTGRT  731
              +D    +LL +++  RT
Sbjct  330  QIID----YLLQLFNHTRT  374


 Score = 56.6 bits (135),  Expect = 8e-05, Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 9/80 (11%)
 Frame = +3

Query  1088  EAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR  1147
             E++LL +HKGRLEARM +LE+HN+QLE QL RLRQ L        V+G +   P   L  
Sbjct  3267  ESRLLWEHKGRLEARMVMLEEHNRQLEQQLQRLRQYL--------VSGNSAPDP-IPLHN  3419

Query  1148  SDSSQPMLLRVVGSQTSDSM  1167
             ++ +   +   +G+Q + S+
Sbjct  3420  TNPTGEFVHGAIGNQNNVSI  3479


>gb|AF435589.1|AF435589 Eptatretus stouti dystrophin-like protein mRNA, partial cds
Length=811

 Score =  226 bits (575),  Expect = 9e-56, Method: Compositional matrix adjust.
 Identities = 127/183 (69%), Positives = 147/183 (80%), Gaps = 3/183 (1%)
 Frame = +1

Query  959   DTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSP  1018
             DTH+RIEH ASRLAEME  NGSYL DS SPNES++DEHLLIQHY QSL+ +SP SQP SP
Sbjct  1     DTHARIEHLASRLAEMEFKNGSYLIDS-SPNESLEDEHLLIQHYRQSLSGESPGSQPHSP  177

Query  1019  AQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQ  1078
             AQILISLE++ER ELERIL DLEEENR+LQ EY+RL+++ E +GL  L          P+
Sbjct  178   AQILISLENQERSELERILRDLEEENRSLQNEYERLRKKQEKEGLGHLLP--MPPTMPPE  351

Query  1079  SPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTV  1138
             SPRD+ELIAEAKLLRQHKGRLEAR Q+LE+HN+QLESQL RLRQLL+QPQ E    G  +
Sbjct  352   SPRDSELIAEAKLLRQHKGRLEARTQVLEEHNRQLESQLCRLRQLLDQPQGEGGSTGGPL  531

Query  1139  SSP  1141
              SP
Sbjct  532   HSP  540


>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence
Length=27905053

 Features in this part of subject sequence:
   dystrophin, isoform F
   dystrophin, isoform H

 Score =  170 bits (430),  Expect(2) = 1e-54, Method: Compositional matrix adjust.
 Identities = 85/130 (65%), Positives = 98/130 (75%), Gaps = 9/130 (6%)
 Frame = +2

Query  784       IPRQLGEVASFGGSNIEPSVRSCFQFA---------NNKPEIEAALFLDWMRLEPQSMVW  834
                 +PRQLGEVA+FGGSNIEPSVRSC + A         N    IE   FL W++ EPQS+VW
Sbjct  15417380  VPRQLGEVAAFGGSNIEPSVRSCLEQAGISQEAIDGNQDISIELQHFLGWLQHEPQSLVW  15417559

Query  835       LPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHY  894
                 LPVLHR+AAAE AKHQAKCNICKE PI+GFRYR LK FN+D+CQ CFF GR AK HK+ +
Sbjct  15417560  LPVLHRLAAAEAAKHQAKCNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTH  15417739

Query  895       PMVEYCTPTT  904
                 PM EYCT  +
Sbjct  15417740  PMHEYCTTVS  15417769


 Features in this part of subject sequence:
   dystrophin, isoform F
   dystrophin, isoform H

 Score = 73.9 bits (180),  Expect(2) = 1e-54, Method: Compositional matrix adjust.
 Identities = 34/60 (56%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
 Frame = +3

Query  903       TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGD--NMETPASSPQLSHDDT  960
                 TTS EDVRDF + LKNKF++++YF KHPR+GYLPVQ+VLEG   N+ T +   ++ H +T
Sbjct  15417831  TTSTEDVRDFTRALKNKFKSRKYFKKHPRVGYLPVQSVLEGKFPNLRTLSI*IKILHSET  15418010


 Features in this part of subject sequence:
   dystrophin, isoform F
   dystrophin, isoform H

 Score =  130 bits (326),  Expect(2) = 4e-42, Method: Compositional matrix adjust.
 Identities = 63/126 (50%), Positives = 92/126 (73%), Gaps = 6/126 (4%)
 Frame = +3

Query  661       LDLLSLSAACDALDQHNLK-QNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCL  719
                 LD +S+S AC++ D+H L+ QND+ +DI  +   L ++Y  +++     +++ L +D+ +
Sbjct  15416682  LDRISMSTACESFDRHGLRAQNDKLIDIPDMTTVLHSLYVTIDK-----IDLTLMLDLAI  15416846

Query  720       NWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLH  779
                 NW+LNVYD+ RTG+IRVLSFK G++ LCK HLE+KYRYLF+ VA +    DQRRLGLLLH
Sbjct  15416847  NWILNVYDSQRTGQIRVLSFKVGLVLLCKGHLEEKYRYLFRLVADTDRRADQRRLGLLLH  15417026

Query  780       DSIQIP  785
                 D IQ+ 
Sbjct  15417027  DCIQVS  15417044


 Features in this part of subject sequence:
   dystrophin, isoform F
   dystrophin, isoform H

 Score = 72.0 bits (175),  Expect(2) = 4e-42, Method: Compositional matrix adjust.
 Identities = 34/55 (61%), Positives = 42/55 (76%), Gaps = 0/55 (0%)
 Frame = +1

Query  605       ISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKAL  659
                 I+ +K   Y +HE +TT WDHP+M EL + LADLN +RFSAYRTAMKLR +QK L
Sbjct  15416449  INLSKPTLYYSHERETTHWDHPEMIELMKGLADLNEIRFSAYRTAMKLRSVQKRL  15416613


 Features in this part of subject sequence:
   dystrophin, isoform F
   dystrophin, isoform H

 Score =  101 bits (252),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 75/116 (64%), Gaps = 9/116 (7%)
 Frame = +1

Query  943       GDNMETPASSPQLS----HDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLL  998
                 GD +E+PA SPQ +     +D HSR+E YASRLA++E     Y     +     DDEH L
Sbjct  15418051  GDALESPAPSPQHTTHQLQNDMHSRLEMYASRLAQVE-----YGGTGSNSTPDSDDEHQL  15418215

Query  999       IQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRL  1054
                 I  YCQ+L   S  S P+SP Q++ ++++E+R ELE I+ DLEEEN NLQAEY +L
Sbjct  15418216  IAQYCQALPGTSNGSAPKSPVQVMAAMDAEQREELEAIIRDLEEENANLQAEYQQL  15418383


 Features in this part of subject sequence:
   dystrophin, isoform F
   dystrophin, isoform H

 Score = 78.2 bits (191),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 36/44 (81%), Positives = 43/44 (97%), Gaps = 0/44 (0%)
 Frame = +3

Query  1084      ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
                 +++AEAKLLRQHKGRLEARMQILEDHN+QLE+QL RLRQLL++P
Sbjct  15418545  DMMAEAKLLRQHKGRLEARMQILEDHNRQLEAQLQRLRQLLDEP  15418676


 Features in this part of subject sequence:
   dystrophin, isoform F
   dystrophin, isoform H

 Score = 64.3 bits (155),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 0/58 (0%)
 Frame = +2

Query  280       DLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIR  337
                 DLQ EIE H  VY  LD   +K+L SL   +DAV+LQRRLD MN +W+ L+ KS+ IR
Sbjct  15380540  DLQSEIETHRVVYDRLDGTGRKLLGSLTSQEDAVMLQRRLDEMNQRWNNLKSKSIAIR  15380713


 Features in this part of subject sequence:
   dystrophin, isoform F
   dystrophin, isoform H

 Score = 40.0 bits (92),  Expect = 7.5, Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
 Frame = +2

Query  337       RSHLEASSDQWKRLHLSLQELLVWLQLKDDELSR--QAPIGGDFPAVQKQ  384
                 R+ LE++S+ W  L LSL+EL  W+  KD ELS     P+ GD  ++QKQ
Sbjct  15384134  RNRLESNSEHWNALLLSLRELTEWVIRKDTELSTLGLGPVRGDAVSLQKQ  15384283


>gb|AC008192.8|AC008192 Drosophila melanogaster, chromosome 3R, region 92A-92A, BAC clone 
BACR12P10, complete sequence
Length=186686

 Score =  170 bits (430),  Expect(2) = 1e-54, Method: Compositional matrix adjust.
 Identities = 85/130 (65%), Positives = 98/130 (75%), Gaps = 9/130 (6%)
 Frame = +2

Query  784     IPRQLGEVASFGGSNIEPSVRSCFQFA---------NNKPEIEAALFLDWMRLEPQSMVW  834
               +PRQLGEVA+FGGSNIEPSVRSC + A         N    IE   FL W++ EPQS+VW
Sbjct  185882  VPRQLGEVAAFGGSNIEPSVRSCLEQAGISQEAIDGNQDISIELQHFLGWLQHEPQSLVW  186061

Query  835     LPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHY  894
               LPVLHR+AAAE AKHQAKCNICKE PI+GFRYR LK FN+D+CQ CFF GR AK HK+ +
Sbjct  186062  LPVLHRLAAAEAAKHQAKCNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTH  186241

Query  895     PMVEYCTPTT  904
               PM EYCT  +
Sbjct  186242  PMHEYCTTVS  186271


 Score = 73.9 bits (180),  Expect(2) = 1e-54, Method: Compositional matrix adjust.
 Identities = 34/60 (56%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
 Frame = +3

Query  903     TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGD--NMETPASSPQLSHDDT  960
               TTS EDVRDF + LKNKF++++YF KHPR+GYLPVQ+VLEG   N+ T +   ++ H +T
Sbjct  186333  TTSTEDVRDFTRALKNKFKSRKYFKKHPRVGYLPVQSVLEGKFPNLRTLSI*IKILHSET  186512


 Score =  130 bits (326),  Expect(2) = 4e-42, Method: Compositional matrix adjust.
 Identities = 63/126 (50%), Positives = 92/126 (73%), Gaps = 6/126 (4%)
 Frame = +3

Query  661     LDLLSLSAACDALDQHNLK-QNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCL  719
               LD +S+S AC++ D+H L+ QND+ +DI  +   L ++Y  +++     +++ L +D+ +
Sbjct  185184  LDRISMSTACESFDRHGLRAQNDKLIDIPDMTTVLHSLYVTIDK-----IDLTLMLDLAI  185348

Query  720     NWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLH  779
               NW+LNVYD+ RTG+IRVLSFK G++ LCK HLE+KYRYLF+ VA +    DQRRLGLLLH
Sbjct  185349  NWILNVYDSQRTGQIRVLSFKVGLVLLCKGHLEEKYRYLFRLVADTDRRADQRRLGLLLH  185528

Query  780     DSIQIP  785
               D IQ+ 
Sbjct  185529  DCIQVS  185546


 Score = 72.0 bits (175),  Expect(2) = 4e-42, Method: Compositional matrix adjust.
 Identities = 34/55 (61%), Positives = 42/55 (76%), Gaps = 0/55 (0%)
 Frame = +1

Query  605     ISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKAL  659
               I+ +K   Y +HE +TT WDHP+M EL + LADLN +RFSAYRTAMKLR +QK L
Sbjct  184951  INLSKPTLYYSHERETTHWDHPEMIELMKGLADLNEIRFSAYRTAMKLRSVQKRL  185115


 Score = 64.3 bits (155),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 0/58 (0%)
 Frame = +2

Query  280     DLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIR  337
               DLQ EIE H  VY  LD   +K+L SL   +DAV+LQRRLD MN +W+ L+ KS+ IR
Sbjct  149042  DLQSEIETHRVVYDRLDGTGRKLLGSLTSQEDAVMLQRRLDEMNQRWNNLKSKSIAIR  149215


 Score = 40.0 bits (92),  Expect = 7.5, Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
 Frame = +2

Query  337     RSHLEASSDQWKRLHLSLQELLVWLQLKDDELSR--QAPIGGDFPAVQKQ  384
               R+ LE++S+ W  L LSL+EL  W+  KD ELS     P+ GD  ++QKQ
Sbjct  152636  RNRLESNSEHWNALLLSLRELTEWVIRKDTELSTLGLGPVRGDAVSLQKQ  152785


>gb|AC007815.7|AC007815 Drosophila melanogaster, chromosome 3R, region 92B-92B, BAC clone 
BACR07I18, complete sequence
Length=159413

 Score =  170 bits (430),  Expect(2) = 1e-54, Method: Compositional matrix adjust.
 Identities = 85/130 (65%), Positives = 98/130 (75%), Gaps = 9/130 (6%)
 Frame = +1

Query  784    IPRQLGEVASFGGSNIEPSVRSCFQFA---------NNKPEIEAALFLDWMRLEPQSMVW  834
              +PRQLGEVA+FGGSNIEPSVRSC + A         N    IE   FL W++ EPQS+VW
Sbjct  14887  VPRQLGEVAAFGGSNIEPSVRSCLEQAGISQEAIDGNQDISIELQHFLGWLQHEPQSLVW  15066

Query  835    LPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHY  894
              LPVLHR+AAAE AKHQAKCNICKE PI+GFRYR LK FN+D+CQ CFF GR AK HK+ +
Sbjct  15067  LPVLHRLAAAEAAKHQAKCNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTH  15246

Query  895    PMVEYCTPTT  904
              PM EYCT  +
Sbjct  15247  PMHEYCTTVS  15276


 Score = 73.9 bits (180),  Expect(2) = 1e-54, Method: Compositional matrix adjust.
 Identities = 34/60 (56%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
 Frame = +2

Query  903    TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGD--NMETPASSPQLSHDDT  960
              TTS EDVRDF + LKNKF++++YF KHPR+GYLPVQ+VLEG   N+ T +   ++ H +T
Sbjct  15338  TTSTEDVRDFTRALKNKFKSRKYFKKHPRVGYLPVQSVLEGKFPNLRTLSI*IKILHSET  15517


 Score =  130 bits (326),  Expect(2) = 4e-42, Method: Compositional matrix adjust.
 Identities = 63/126 (50%), Positives = 92/126 (73%), Gaps = 6/126 (4%)
 Frame = +2

Query  661    LDLLSLSAACDALDQHNLK-QNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCL  719
              LD +S+S AC++ D+H L+ QND+ +DI  +   L ++Y  +++     +++ L +D+ +
Sbjct  14189  LDRISMSTACESFDRHGLRAQNDKLIDIPDMTTVLHSLYVTIDK-----IDLTLMLDLAI  14353

Query  720    NWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLH  779
              NW+LNVYD+ RTG+IRVLSFK G++ LCK HLE+KYRYLF+ VA +    DQRRLGLLLH
Sbjct  14354  NWILNVYDSQRTGQIRVLSFKVGLVLLCKGHLEEKYRYLFRLVADTDRRADQRRLGLLLH  14533

Query  780    DSIQIP  785
              D IQ+ 
Sbjct  14534  DCIQVS  14551


 Score = 72.0 bits (175),  Expect(2) = 4e-42, Method: Compositional matrix adjust.
 Identities = 34/55 (61%), Positives = 42/55 (76%), Gaps = 0/55 (0%)
 Frame = +3

Query  605    ISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKAL  659
              I+ +K   Y +HE +TT WDHP+M EL + LADLN +RFSAYRTAMKLR +QK L
Sbjct  13956  INLSKPTLYYSHERETTHWDHPEMIELMKGLADLNEIRFSAYRTAMKLRSVQKRL  14120


 Score =  101 bits (252),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 75/116 (64%), Gaps = 9/116 (7%)
 Frame = +3

Query  943    GDNMETPASSPQLS----HDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLL  998
              GD +E+PA SPQ +     +D HSR+E YASRLA++E     Y     +     DDEH L
Sbjct  15558  GDALESPAPSPQHTTHQLQNDMHSRLEMYASRLAQVE-----YGGTGSNSTPDSDDEHQL  15722

Query  999    IQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRL  1054
              I  YCQ+L   S  S P+SP Q++ ++++E+R ELE I+ DLEEEN NLQAEY +L
Sbjct  15723  IAQYCQALPGTSNGSAPKSPVQVMAAMDAEQREELEAIIRDLEEENANLQAEYQQL  15890


 Score = 78.2 bits (191),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 36/44 (81%), Positives = 43/44 (97%), Gaps = 0/44 (0%)
 Frame = +2

Query  1084   ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQP  1127
              +++AEAKLLRQHKGRLEARMQILEDHN+QLE+QL RLRQLL++P
Sbjct  16052  DMMAEAKLLRQHKGRLEARMQILEDHNRQLEAQLQRLRQLLDEP  16183


>ref|XM_001742610.1| Monosiga brevicollis MX1 predicted protein MONBRDRAFT_22129 mRNA, 
complete cds
Length=3036

 Score =  217 bits (552),  Expect = 3e-53, Method: Compositional matrix adjust.
 Identities = 157/586 (26%), Positives = 279/586 (47%), Gaps = 66/586 (11%)
 Frame = +1

Query  587   PASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAY  646
             PA +  +   +   W +A++ +  PYYINHET+ T W  P++    Q L+  +++R +AY
Sbjct  139   PARKSMIGEPLPHGWAKALTDSGTPYYINHETRVTQWVDPRLQSCLQELSAHDDIRLAAY  318

Query  647   RTAMKLRRLQKALCLDLLSLSAACDA---LDQHNLKQNDQPMDILQIINCLTTIYDRLEQ  703
             RTA+KLR +Q  L +  + L  A +A   LD H+   + Q +D  ++   L  +Y  L  
Sbjct  319   RTAIKLRDVQVYLRMSQIKLPTALNAFYALDVHSDYSSGQQIDAEEMAVVLMEMYADLPH  498

Query  704   EHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVA  763
                N       V++ ++ +L +YD  R+G I + +F+T +  L  + +E+KYR+LF    
Sbjct  499   PQRN-------VEVMISMMLKIYDRNRSGHISLQAFQTALTLLSVSWIEEKYRFLFTIYD  657

Query  764   SS-TGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPS--VRSCFQFANNK-----PE  815
             ++   F    +L  LL   + +P  + E  +F  +   P       F+    +      +
Sbjct  658   TNQDDFITVEQLTQLLRHVVGLPNGIREAYAFCPTKEFPEQEAHRVFELERERNGAAATQ  837

Query  816   IEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYD  875
             I    F+++   +P+ ++WLPV+HRVAA E +KH+  C +CK  PIIGFRY+++   + D
Sbjct  838   ISLNTFVNYCMTDPRPLLWLPVMHRVAATENSKHETTCCVCKMYPIIGFRYKNMTSMDRD  1017

Query  876   ICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYL  935
             +CQ C+++GR   GHK  + + EYC  +T+ +D +DF   +K K   K+           
Sbjct  1018  VCQECYWTGREGNGHKASHEVKEYCFSSTARQDAKDFFGRIKRKMTKKKADESEAARTAR  1197

Query  936   PVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDE  995
               + V        P + P++S    + +     +   ++ +     L+  ++    + DE
Sbjct  1198  AAKPV--------PVAEPRMSVAVPYEQALQEPAEGDDVVDHADVGLSHGVA---GLQDE  1344

Query  996   HLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNL-----QAE  1050
             H LIQ     L        P S   ++++LE+E++  L R++ +L+ ENR L      +E
Sbjct  1345  HDLIQEMAAQLKAADDEGGPVS--TMVVNLETEQKLHLLRVIDELDAENRQLLQRLMDSE  1518

Query  1051  YDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHN  1110
              DR+ +  E     P+           +  RDA               ++ R+  L + N
Sbjct  1519  RDRVAELQE-----PV--------AGDEGVRDA---------------MQGRINDLNERN  1614

Query  1111  KQLESQLHRLRQLL-EQPQAEAKVNGT-TVSSPSTSLQRSDSSQPM  1154
             + L  QL RL+ +L     A+   N    V++P+  L R+ +   M
Sbjct  1615  RDLVDQLTRLQAMLVASGMAQGHDNDNEQVNAPAYELARAGTHDDM  1752


>gb|L06945.1|FSCTYRDYS Torpedo californica postsynaptic membrane protein mRNA, complete 
cds
Length=4615

 Score =  210 bits (535),  Expect = 4e-51, Method: Compositional matrix adjust.
 Identities = 180/628 (28%), Positives = 300/628 (47%), Gaps = 68/628 (10%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQND--QPMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   + L+ +    +A  ++ L   D    + + ++   +
Sbjct  211   DLDCIRLSTYRTACKLRFVQKKCNVHLVDVWNVIEAFRENGLNTMDPNAELSVARLEAII  390

Query  695   TTIYDRLEQEHNNL--VNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             + I  +L +   N   +NV   V + LN+LL  YD    G+I V + K  + ++C   + 
Sbjct  391   SAILYQLNKRMPNTHQINVEQSVSLLLNFLLAAYDGEGHGKISVFAVKVVLATICGGKIL  570

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E + RSCF   + 
Sbjct  571   DKLRYIFSQISDSNGVMINAKFDQFLREVLKLPTSVFEGPSFGYT--EQASRSCF---SQ  735

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VW+P++HR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  736   QKKVTLNSFLDTLMSDPPPQCLVWIPLMHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  915

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRD-FAKVLKNKFRTKRYFAKH  929
               NY +CQ CF+ G  +  H   + M EY +  +  + + +  +K L      +     +
Sbjct  916   CHNYQLCQDCFWRGHASGSHSNQHQMKEYTSWKSPAKKITNALSKSLSCASSHEPLHPIY  1095

Query  930   PRMGYLPVQTVLEGDNMETPASSPQLSHDD--THSRIE----------HY----ASRLAE  973
             P     P+           P+ +P   +D   +HS I           HY    A RL +
Sbjct  1096  PDQPEKPLNLA-----HVVPSRTPPNMNDTMFSHSVITSGSPSPNKRLHYSLDIADRLGD  1260

Query  974   MENSNGSYLNDSI--------SPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISL  1025
                  G Y+N  +        SPN  +D+EH LI  Y   L  ++  SQ R+P+ +  ++
Sbjct  1261  EHVLIGLYINLLLNNSSRVLDSPNR-MDEEHRLIARYAARLAAEAASSQQRAPSDLTSTI  1437

Query  1026  ESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAEL  1085
             ++ +  +  +++A+LE +NR +  E  RL+ +HE     P P   +  PT         L
Sbjct  1438  DANK--QQRQLIAELENKNREILQEIQRLRLEHEQAS-QPTPEKAQQNPT---------L  1581

Query  1086  IAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLL--EQPQAEAKVNGTTVSSPST  1143
             +AE +LLRQ K  LE RM  L++  ++L  QL  L +LL  E+ + E +  G+  SSPS 
Sbjct  1582  LAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKEEEMRQETQGTGSPRSSPSH  1761

Query  1144  SLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV-  1202
             ++ RS    PM +R   + ++ +         PQD+ TG   V   +  +F  S   N+ 
Sbjct  1762  TISRS-VPIPMPIRSTSTCSTPTHT-------PQDSLTG---VGGDVQEAFAQSSRRNLR  1908

Query  1203  GSLFHMADDLGRAMESLVSVMTDEEGAE  1230
               L   AD +   M SLV  +  E G+E
Sbjct  1909  NDLLVAADSITNTMSSLVKELNSEAGSE  1992


>ref|XM_001368984.1| PREDICTED: Monodelphis domestica similar to dystrobrevin, alpha,, 
transcript variant 2 (LOC100023710), mRNA
Length=2061

 Score =  209 bits (533),  Expect = 6e-51, Method: Compositional matrix adjust.
 Identities = 183/614 (29%), Positives = 296/614 (48%), Gaps = 74/614 (12%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  76    DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  255

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  256   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  435

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R  L L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  436   DKLRYIFSMISDSSGVMVYGRYDLFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  600

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  601   QKKVTLNAFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  780

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK--  928
               NY +CQ CF+ G  +  H   + M EY +        +  AK L N        A   
Sbjct  781   CHNYQLCQDCFWRGHASGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  939

Query  929   ---HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYL  982
                HP     P + +     ++T    P  S +DT   HS           + +S   ++
Sbjct  940   EPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHS-----------VPSSGSPFI  1086

Query  983   NDSI--SPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERIL  1037
               S+  SPN  +D+EH LI  Y   L  ++  +QP   R P+ I  ++++ +  +  +++
Sbjct  1087  TRSMLDSPNR-LDEEHRLIARYAARLAAETSSTQPSQQRGPSDISFTIDANK--QQRQLI  1257

Query  1038  ADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKG  1097
             A+LE +NR +  E  RL+ +HE     P P   +  PT         L+AE +LLRQ K 
Sbjct  1258  AELENKNREILQEIQRLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKD  1407

Query  1098  RLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLR  1157
              LE RM  L++  ++L  QL  L +LL+   A     G+  SSPS ++ R     PM +R
Sbjct  1408  ELEQRMSALQESRRELMVQLEGLMKLLKTQGA-----GSPRSSPSHTISRPI---PMPIR  1563

Query  1158  VVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV-GSLFHMADDLGRAM  1216
                + ++ +         PQD+ TG   V   +  +F  S   N+   L   AD +   M
Sbjct  1564  SASACSTPTHT-------PQDSLTG---VGGDVQEAFAQSTRRNLRNDLLVAADSITNTM  1713

Query  1217  ESLVSVMTDEEGAE  1230
              SLV  +  E G+E
Sbjct  1714  SSLVKELNSEVGSE  1755


>ref|XM_001515642.1| PREDICTED: Ornithorhynchus anatinus similar to dystrobrevin, 
alpha,, transcript variant 2 (LOC100079727), mRNA
Length=2061

 Score =  206 bits (525),  Expect = 5e-50, Method: Compositional matrix adjust.
 Identities = 183/614 (29%), Positives = 295/614 (48%), Gaps = 74/614 (12%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  76    DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNVELNVARLEAVL  255

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  256   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  435

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R  L L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  436   DKLRYIFSMISDSSGVMVYGRYDLFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  600

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  601   QKKVTLNAFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  780

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK--  928
               NY +CQ CF+ G  +  H   + M EY +        +  AK L N        A   
Sbjct  781   CHNYQLCQDCFWRGHASGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  939

Query  929   ---HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYL  982
                HP     P + +     ++T    P  S +DT   HS           + +S   ++
Sbjct  940   EPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHS-----------VPSSGSPFI  1086

Query  983   NDSI--SPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERIL  1037
               S+  SPN  +D+EH LI  Y   L  ++  SQP   R  + I  ++++ +  +  +++
Sbjct  1087  TRSMLDSPNR-LDEEHRLIARYAARLAAETSSSQPGQQRGASDISFTIDANK--QQRQLI  1257

Query  1038  ADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKG  1097
             A+LE +NR +  E  RL+ +HE     P P   +  PT         L+AE +LLRQ K 
Sbjct  1258  AELENKNREILQEIQRLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKD  1407

Query  1098  RLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLR  1157
              LE RM  L++  ++L  QL  L +LL+   A     G+  SSPS ++ R     PM +R
Sbjct  1408  ELEQRMSALQESRRELMVQLEGLMKLLKTQGA-----GSPRSSPSHTISRPI---PMPIR  1563

Query  1158  VVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV-GSLFHMADDLGRAM  1216
                + ++ +         PQD+ TG   V   +  +F  S   N+   L   AD +   M
Sbjct  1564  SASTCSTPTHT-------PQDSLTG---VGGDVQEAFAQSARRNLRNDLLVAADSITNTM  1713

Query  1217  ESLVSVMTDEEGAE  1230
              SLV  +  E G+E
Sbjct  1714  SSLVKELNSEVGSE  1755


>ref|XM_001369015.1| PREDICTED: Monodelphis domestica similar to dystrobrevin, alpha,, 
transcript variant 3 (LOC100023710), mRNA
Length=2052

 Score =  206 bits (525),  Expect = 5e-50, Method: Compositional matrix adjust.
 Identities = 182/611 (29%), Positives = 293/611 (47%), Gaps = 71/611 (11%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  76    DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  255

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  256   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  435

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R  L L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  436   DKLRYIFSMISDSSGVMVYGRYDLFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  600

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  601   QKKVTLNAFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  780

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFA--K  928
               NY +CQ CF+ G  +  H   + M EY +        +  AK L N        A  +
Sbjct  781   CHNYQLCQDCFWRGHASGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  939

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYLNDS  985
              P     P Q     +        P  S +DT   HS           + +S   ++  S
Sbjct  940   EPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHS-----------VPSSGSPFITRS  1086

Query  986   I--SPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADL  1040
             +  SPN  +D+EH LI  Y   L  ++  +QP   R P+ I  ++++ +  +  +++A+L
Sbjct  1087  MLDSPNR-LDEEHRLIARYAARLAAETSSTQPSQQRGPSDISFTIDANK--QQRQLIAEL  1257

Query  1041  EEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLE  1100
             E +NR +  E  RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE
Sbjct  1258  ENKNREILQEIQRLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELE  1407

Query  1101  ARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVG  1160
              RM  L++  ++L  QL  L +LL+   A     G+  SSPS ++ R     PM +R   
Sbjct  1408  QRMSALQESRRELMVQLEGLMKLLKTQGA-----GSPRSSPSHTISRPI---PMPIRSAS  1563

Query  1161  SQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV-GSLFHMADDLGRAMESL  1219
             + ++ +         PQD+ TG   V   +  +F  S   N+   L   AD +   M SL
Sbjct  1564  ACSTPTHT-------PQDSLTG---VGGDVQEAFAQSTRRNLRNDLLVAADSITNTMSSL  1713

Query  1220  VSVMTDEEGAE  1230
             V  +  E G+E
Sbjct  1714  VKELNSEVGSE  1746


>gb|DQ516343.1| Danio rerio alpha-dystrobrevin splice variant 1 (ADTN) mRNA, 
complete cds, alternatively spliced
Length=2342

 Score =  206 bits (523),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 184/648 (28%), Positives = 296/648 (45%), Gaps = 83/648 (12%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIINCL  694
             DL+++R S YRTA KLR +QK   L L+ +    +   ++ L   + +    +  +   L
Sbjct  76    DLDSIRLSTYRTACKLRFIQKRCNLHLVDIWNIIEVFRENRLNSVELNTEFSVSHLQAIL  255

Query  695   TTIYDRLEQE--HNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + +NV   +   LN+LL  YD    G+I     K  + +LC   + 
Sbjct  256   STIFQQLNKRLPTTHQINVDQSISYLLNFLLTAYDQEGVGKISAFVMKMALATLCGGKIL  435

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F Q++   G     +    L + +++P  + E  SFG +  E S RSCF     
Sbjct  436   DKLRYIFSQISDPNGLMIYSQFDQFLREVLKVPVSVFEGPSFGYT--EQSTRSCFP---Q  600

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++   +FLD    +P  Q +VWLP++HR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  601   EKKVTLNVFLDTFMSDPPPQCLVWLPLMHRLANVENVFHPVECSYCHSQSMMGFRYRCQQ  780

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRD-FAKVLK-NKFRTKRY--F  926
               NY +CQ CF+ G  +  H   + M EY +  +  + + D  +K L     R   Y  F
Sbjct  781   CDNYQLCQECFWRGHASGSHSNQHQMKEYMSWKSPAKKLSDALSKSLSCAASREPAYPQF  960

Query  927   AKHPRMG-----YLPVQTVLEGD----NMETPAS----SPQLSHDDTH-----SRIE---  965
             +  P         +P + V  G+    +   P+S    S + +HD+T+     SR     
Sbjct  961   SDTPEKTLNLNHIVPPRPVATGNEYMLSHSMPSSGNPYSSKAAHDETNQMKLFSRTTPDL  1140

Query  966   ----------HYASRLAEMENSNGSYLN---------DSISPNESIDDEHLLIQHYCQSL  1006
                         A RLA+     G Y+N            S N+  DDEH LI  Y   L
Sbjct  1141  LKGKGVQYSLDIADRLADEHILIGLYVNLLQKERSCFQHSSKNQ--DDEHCLIARYASRL  1314

Query  1007  NQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPL  1066
               D   ++ R P  I + L+S ++    +++A+LE +N+ +  E  RL+QQHE     PL
Sbjct  1315  AADEVAAKGRVPTDISLCLDSNKQQ--RQLIAELENKNKEILQEIQRLRQQHEEASQPPL  1488

Query  1067  PSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQ  1126
                        ++ ++  L+AE +LLRQ K  LE RM  L++  ++L  QL +L  LL+ 
Sbjct  1489  ----------DKNQQNPMLLAELRLLRQRKEELEQRMSALQESRRELMVQLEQLMLLLKN  1638

Query  1127  PQAEAKVNGT---TVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGL  1183
                      +   T+S+   SL  + +  PM ++     T+ S         PQD+  GL
Sbjct  1639  QGPGPSPRSSPSHTLSASVQSLSGNSTPIPMPVQSTSGNTTPSQT-------PQDSLMGL  1797

Query  1184  EEVMEQLNNSFPSSRGHNVGS-LFHMADDLGRAMESLVSVMTDEEGAE  1230
                ++Q   +F      N+ S L   AD +   M SLV  +  E G E
Sbjct  1798  GGEVQQ---AFAQGSRRNLRSDLLVAADSITNTMSSLVKELNSEAGNE  1932


>gb|DQ516344.1| Danio rerio alpha-dystrobrevin splice variant 2 (ADTN) mRNA, 
complete cds, alternatively spliced
Length=2354

 Score =  204 bits (519),  Expect = 2e-49, Method: Compositional matrix adjust.
 Identities = 186/652 (28%), Positives = 297/652 (45%), Gaps = 87/652 (13%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIINCL  694
             DL+++R S YRTA KLR +QK   L L+ +    +   ++ L   + +    +  +   L
Sbjct  76    DLDSIRLSTYRTACKLRFIQKRCNLHLVDIWNIIEVFRENRLNSVELNTEFSVSHLQAIL  255

Query  695   TTIYDRLEQE--HNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + +NV   +   LN+LL  YD    G+I     K  + +LC   + 
Sbjct  256   STIFQQLNKRLPTTHQINVDQSISYLLNFLLTAYDQEGVGKISAFVMKMALATLCGGKIL  435

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F Q++   G     +    L + +++P  + E  SFG +  E S RSCF     
Sbjct  436   DKLRYIFSQISDPNGLMIYSQFDQFLREVLKVPVSVFEGPSFGYT--EQSTRSCFP---Q  600

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++   +FLD    +P  Q +VWLP++HR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  601   EKKVTLNVFLDTFMSDPPPQCLVWLPLMHRLANVENVFHPVECSYCHSQSMMGFRYRCQQ  780

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRD-FAKVLK-NKFRTKRY--F  926
               NY +CQ CF+ G  +  H   + M EY +  +  + + D  +K L     R   Y  F
Sbjct  781   CDNYQLCQECFWRGHASGSHSNQHQMKEYMSWKSPAKKLSDALSKSLSCAASREPAYPQF  960

Query  927   AKHPR--------MGYLPVQTVLEGD----NMETPAS----SPQLSHDDTH-----SRIE  965
             +  P         +G  P + V  G+    +   P+S    S + +HD+T+     SR  
Sbjct  961   SDTPEKTLNLNHIVGTWPPRPVATGNEYMLSHSMPSSGNPYSSKAAHDETNQMKLFSRTT  1140

Query  966   -------------HYASRLAEMENSNGSYLN---------DSISPNESIDDEHLLIQHYC  1003
                            A RLA+     G Y+N            S N+  DDEH LI  Y 
Sbjct  1141  PDLLKGKGVQYSLDIADRLADEHILIGLYVNLLQKERSCFQHSSKNQ--DDEHCLIARYA  1314

Query  1004  QSLNQDSPLSQP-RSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKG  1062
               L  D   +Q  R P  I + L+S +  +  +++A+LE +N+ +  E  RL+QQHE   
Sbjct  1315  SRLAADEVAAQKGRVPTDISLCLDSNK--QQRQLIAELENKNKEILQEIQRLRQQHEEAS  1488

Query  1063  LSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQ  1122
               PL           ++ ++  L+AE +LLRQ K  LE RM  L++  ++L  QL +L  
Sbjct  1489  QPPL----------DKNQQNPMLLAELRLLRQRKEELEQRMSALQESRRELMVQLEQLML  1638

Query  1123  LLEQPQAEAKVNGT---TVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDT  1179
             LL+          +   T+S+   SL  + +  PM ++     T+ S         PQD+
Sbjct  1639  LLKNQGPGPSPRSSPSHTLSASVQSLSGNSTPIPMPVQSTSGNTTPS-------QTPQDS  1797

Query  1180  STGLEEVMEQLNNSFPSSRGHNVGS-LFHMADDLGRAMESLVSVMTDEEGAE  1230
               GL   ++Q   +F      N+ S L   AD +   M SLV  +  E G E
Sbjct  1798  LMGLGGEVQQ---AFAQGSRRNLRSDLLVAADSITNTMSSLVKELNSEAGNE  1944


>ref|XM_001515599.1| PREDICTED: Ornithorhynchus anatinus similar to dystrobrevin, 
alpha,, transcript variant 1 (LOC100079727), mRNA
Length=2052

 Score =  204 bits (518),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 182/611 (29%), Positives = 292/611 (47%), Gaps = 71/611 (11%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  76    DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNVELNVARLEAVL  255

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  256   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  435

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R  L L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  436   DKLRYIFSMISDSSGVMVYGRYDLFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  600

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  601   QKKVTLNAFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  780

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFA--K  928
               NY +CQ CF+ G  +  H   + M EY +        +  AK L N        A  +
Sbjct  781   CHNYQLCQDCFWRGHASGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  939

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYLNDS  985
              P     P Q     +        P  S +DT   HS           + +S   ++  S
Sbjct  940   EPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHS-----------VPSSGSPFITRS  1086

Query  986   I--SPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADL  1040
             +  SPN  +D+EH LI  Y   L  ++  SQP   R  + I  ++++ +  +  +++A+L
Sbjct  1087  MLDSPNR-LDEEHRLIARYAARLAAETSSSQPGQQRGASDISFTIDANK--QQRQLIAEL  1257

Query  1041  EEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLE  1100
             E +NR +  E  RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE
Sbjct  1258  ENKNREILQEIQRLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELE  1407

Query  1101  ARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVG  1160
              RM  L++  ++L  QL  L +LL+   A     G+  SSPS ++ R     PM +R   
Sbjct  1408  QRMSALQESRRELMVQLEGLMKLLKTQGA-----GSPRSSPSHTISRPI---PMPIRSAS  1563

Query  1161  SQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV-GSLFHMADDLGRAMESL  1219
             + ++ +         PQD+ TG   V   +  +F  S   N+   L   AD +   M SL
Sbjct  1564  TCSTPTHT-------PQDSLTG---VGGDVQEAFAQSARRNLRNDLLVAADSITNTMSSL  1713

Query  1220  VSVMTDEEGAE  1230
             V  +  E G+E
Sbjct  1714  VKELNSEVGSE  1746


>ref|NM_032975.3| Homo sapiens dystrobrevin, alpha (DTNA), transcript variant 2, 
mRNA
Length=6537

 Score =  202 bits (514),  Expect = 9e-49, Method: Compositional matrix adjust.
 Identities = 182/614 (29%), Positives = 293/614 (47%), Gaps = 74/614 (12%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQH---NLKQNDQPMDILQIINC  693
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++   NL  N + +++ ++   
Sbjct  427   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTE-LNVSRLEAV  603

Query  694   LTTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHL  751
             L+TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   +
Sbjct  604   LSTIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKI  783

Query  752   EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN  811
              DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   +
Sbjct  784   MDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---S  948

Query  812   NKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  869
              + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  
Sbjct  949   QQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQ  1128

Query  870   KHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK-  928
             +  NY +CQ CF+ G     H   + M EY +        +  AK L N        A  
Sbjct  1129  QCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASS  1287

Query  929   ----HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSY  981
                 HP     P + +     ++T    P  S +DT   HS           + +S   +
Sbjct  1288  REPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHS-----------VPSSGSPF  1434

Query  982   LNDS-ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERIL  1037
             +  S +  +  +D+EH LI  Y   L  +S  SQP   RS   I  ++++ +  +  +++
Sbjct  1435  ITRSMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANK--QQRQLI  1608

Query  1038  ADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKG  1097
             A+LE +NR +  E  RL+ +HE     P P   +  PT         L+AE +LLRQ K 
Sbjct  1609  AELENKNREILQEIQRLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKD  1758

Query  1098  RLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLR  1157
              LE RM  L++  ++L  QL  L +LL+   A     G+  SSPS ++ R     PM +R
Sbjct  1759  ELEQRMSALQESRRELMVQLEGLMKLLKTQGA-----GSPRSSPSHTISRPI---PMPIR  1914

Query  1158  VVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV-GSLFHMADDLGRAM  1216
                + ++ +         PQD+ TG   V   +  +F  S   N+   L   AD +   M
Sbjct  1915  SASACSTPTHT-------PQDSLTG---VGGDVQEAFAQSSRRNLRNDLLVAADSITNTM  2064

Query  1217  ESLVSVMTDEEGAE  1230
              SLV  +  E G+E
Sbjct  2065  SSLVKELNSEVGSE  2106


>ref|XM_001368953.1| PREDICTED: Monodelphis domestica similar to dystrobrevin, alpha,, 
transcript variant 1 (LOC100023710), mRNA
Length=2232

 Score =  201 bits (510),  Expect = 3e-48, Method: Compositional matrix adjust.
 Identities = 192/662 (29%), Positives = 305/662 (46%), Gaps = 113/662 (17%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  76    DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  255

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  256   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  435

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R  L L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  436   DKLRYIFSMISDSSGVMVYGRYDLFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  600

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  601   QKKVTLNAFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  780

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK--  928
               NY +CQ CF+ G  +  H   + M EY +        +  AK L N        A   
Sbjct  781   CHNYQLCQDCFWRGHASGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  939

Query  929   ---HPRMGYLPVQTVLEGDNMET------------------PAS-SPQLSHDDTHSRIE-  965
                HP     P + +     ++T                  P+S SP ++   +H   E 
Sbjct  940   EPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHSVPSSGSPFITRSSSHKNTEV  1119

Query  966   -------------------HY----ASRLAE----------MENSNGSYLNDSISPNESI  992
                                HY    A RLA+          M  SN S + D  SPN  +
Sbjct  1120  EQSKLLARAAPIFLKGKGLHYSLDVADRLADEHVLIGLYVNMLQSNPSRMLD--SPNR-L  1290

Query  993   DDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADLEEENRNLQA  1049
             D+EH LI  Y   L  ++  +QP   R P+ I  ++++ +  +  +++A+LE +NR +  
Sbjct  1291  DEEHRLIARYAARLAAETSSTQPSQQRGPSDISFTIDANK--QQRQLIAELENKNREILQ  1464

Query  1050  EYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDH  1109
             E  RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE RM  L++ 
Sbjct  1465  EIQRLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELEQRMSALQES  1614

Query  1110  NKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGE  1169
              ++L  QL  L +LL+   A     G+  SSPS ++ R     PM +R   + ++ +   
Sbjct  1615  RRELMVQLEGLMKLLKTQGA-----GSPRSSPSHTISRPI---PMPIRSASACSTPTHT-  1767

Query  1170  EDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV-GSLFHMADDLGRAMESLVSVMTDEEG  1228
                   PQD+ TG   V   +  +F  S   N+   L   AD +   M SLV  +  E G
Sbjct  1768  ------PQDSLTG---VGGDVQEAFAQSTRRNLRNDLLVAADSITNTMSSLVKELNSEVG  1920

Query  1229  AE  1230
             +E
Sbjct  1921  SE  1926


>ref|XM_001359998.2| Drosophila pseudoobscura pseudoobscura GA20280 (Dpse\GA20280), 
mRNA
Length=3141

 Score =  200 bits (508),  Expect = 5e-48, Method: Compositional matrix adjust.
 Identities = 125/388 (32%), Positives = 210/388 (54%), Gaps = 19/388 (4%)
 Frame = +1

Query  93    RIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYT  152
             ++ R++  WDE Q+ +  R  QL  ML DS ++   + E E+ L +   + E       T
Sbjct  1669  KVTRLREHWDETQQCVLQRAAQLKTMLSDSQRFEAKRLELEKWLARMEQRAERMGTIATT  1848

Query  153   VDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRS  212
              D ++ +  E K    +L Q + + D+ N+L  KL+  Y  DDT ++  +TE +N  + +
Sbjct  1849  ADILEAQQKEQKSFHAELHQNKQHFDIFNELTQKLIAVYPNDDTSRIKKMTEVVNQRYSN  2028

Query  213   IHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVK  272
             ++  V  R   L      LQ F   +++FLA+L+E ET     +    +  L+       
Sbjct  2029  LNNGVINRGKQLHAAVHSLQSFDRAMDQFLAFLSETETLCENAESEIDRNPLM-------  2187

Query  273   ELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKK  332
                  ++DLQ EIE H  VY  LD   +K+L SL   +DAV+LQRRLD MN +W+ L+ K
Sbjct  2188  -----FKDLQSEIETHRVVYDRLDGTGRKLLGSLTSQEDAVMLQRRLDEMNQRWNNLKSK  2352

Query  333   SLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSR--QAPIGGDFPAVQKQNDVHRA  390
             S+ IR+ LE++S+ W  L LSL+EL  W+  KD ELS     P+ GD  ++QKQ D H+A
Sbjct  2353  SIAIRNRLESNSEHWNALLLSLRELTEWVIRKDTELSTLGLGPVRGDAASLQKQLDDHKA  2532

Query  391   FKRELKTKEPVIMSTLETVRIFLTEQPL-----EGLEKLYQEPRELPPEERAQNVTRLLR  445
             F+R+L+ K P++ S L + R ++  +       +       + R +  EE+++ +TR +R
Sbjct  2533  FRRQLEDKRPIVESNLTSGRQYIANEAAVSDTSDTEANHDSDSRYMSAEEQSRELTRSIR  2712

Query  446   KQAEEVNTEWEKLNLHSADWQRKIDETL  473
             ++  +++ +W  L   S +W+ ++DE +
Sbjct  2713  REVGKLSEQWNNLIDRSDNWKHRLDEYM  2796


>ref|XM_002019867.1| Drosophila persimilis GL12655 (Dper\GL12655), mRNA
Length=3138

 Score =  200 bits (508),  Expect = 5e-48, Method: Compositional matrix adjust.
 Identities = 125/388 (32%), Positives = 210/388 (54%), Gaps = 19/388 (4%)
 Frame = +1

Query  93    RIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYT  152
             ++ R++  WDE Q+ +  R  QL  ML DS ++   + E E+ L +   + E       T
Sbjct  1666  KVTRLREHWDETQQCVLQRAAQLKTMLSDSQRFEAKRLELEKWLARMEQRAERMGTIATT  1845

Query  153   VDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRS  212
              D ++ +  E K    +L Q + + D+ N+L  KL+  Y  DDT ++  +TE +N  + +
Sbjct  1846  ADILEAQQKEQKSFHAELHQNKQHFDIFNELTQKLIAVYPNDDTSRIKKMTEVVNQRYSN  2025

Query  213   IHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVK  272
             ++  V  R   L      LQ F   +++FLA+L+E ET     +    +  L+       
Sbjct  2026  LNNGVINRGKQLHAAVHSLQSFDRAMDQFLAFLSETETLCENAESEIDRNPLM-------  2184

Query  273   ELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKK  332
                  ++DLQ EIE H  VY  LD   +K+L SL   +DAV+LQRRLD MN +W+ L+ K
Sbjct  2185  -----FKDLQSEIETHRVVYDRLDGTGRKLLGSLTSQEDAVMLQRRLDEMNQRWNNLKSK  2349

Query  333   SLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSR--QAPIGGDFPAVQKQNDVHRA  390
             S+ IR+ LE++S+ W  L LSL+EL  W+  KD ELS     P+ GD  ++QKQ D H+A
Sbjct  2350  SIAIRNRLESNSEHWNALLLSLRELTEWVIRKDTELSTLGLGPVRGDAASLQKQLDDHKA  2529

Query  391   FKRELKTKEPVIMSTLETVRIFLTEQPL-----EGLEKLYQEPRELPPEERAQNVTRLLR  445
             F+R+L+ K P++ S L + R ++  +       +       + R +  EE+++ +TR +R
Sbjct  2530  FRRQLEDKRPIVESNLTSGRQYIANEAAVSDTSDTEANHDSDSRYMSAEEQSRELTRSIR  2709

Query  446   KQAEEVNTEWEKLNLHSADWQRKIDETL  473
             ++  +++ +W  L   S +W+ ++DE +
Sbjct  2710  REVGKLSEQWNNLIDRSDNWKHRLDEYM  2793


>ref|XM_001639844.1| Nematostella vectensis predicted protein (NEMVEDRAFT_v1g85254) 
partial mRNA
Length=1782

 Score =  199 bits (506),  Expect = 8e-48, Method: Compositional matrix adjust.
 Identities = 155/520 (29%), Positives = 248/520 (47%), Gaps = 49/520 (9%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDI--LQIINCL  694
             + + +RF++YRTA KL+ +QK   L L+ +    +A  ++ L   D   ++  L++   +
Sbjct  4     NFDTIRFASYRTAAKLQFIQKKTNLHLVDVYNMIEAFRENGLNTLDHNTELHELRLEAIV  183

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++I+     RL   HN  V+V   + +  NWLL  YD+   GRIRVLS KT + S+C   
Sbjct  184   SSIFYALNKRLPTTHN--VDVERSISLVTNWLLYAYDSDAIGRIRVLSVKTALSSMCYGR  357

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             L DK RY F Q+  + G  +  +    L + +Q+P  +GE  +FG +    S+    Q  
Sbjct  358   LVDKLRYHFSQIEDNNGMLNFPKFEAYLRELLQLPASVGEAPTFGFTEDVASIFFKPQGP  537

Query  811   NNKPEIEAALFLDWM--RLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
              ++   +   FL+ +  +  P    WL  L ++  A   +HQ  C +CK  P++GFRY+ 
Sbjct  538   LDRQRTQLVHFLECVMNKEPPPPYAWLSTLQKMNNAAKTEHQVACQVCKNKPVVGFRYKC  717

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCT--PTTSGEDVRDFAKVLKNKFRTKRY-  925
             L  +NY +CQ CF+ G+V++ HK  + M EY T      G  +R  +K L    + KR  
Sbjct  718   LHCYNYVLCQDCFWRGKVSQHHKTDHDMREYSTWNAGEKGSSLR--SKFLCGSGKKKRPS  891

Query  926   ---FAKHPRMGYL--------PVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAE-  973
                F + P             P+ + L G N  T       S +   S +    ++L++ 
Sbjct  892   LPDFPREPEPSRTLDMTNIVPPLPSDLSGPNNATSDYVTSPSPESVVSNVSSNPTKLSDE  1071

Query  974   ---MENSNG-----SYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISL  1025
                +  S+G      YL   I  +  +DDEH LI  Y   L +   + +  SPA     L
Sbjct  1072  VTCVNLSSGFWCWIFYLYYLILFSCRMDDEHKLISRYAARLVR---VHKTFSPATSSSEL  1242

Query  1026  ESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAEL  1085
               +   E   ++  LE +NR L  E  RL+ +H+           E   ++ Q  ++ EL
Sbjct  1243  SIDANKEQRELIQTLENKNRLLLKEIRRLRDEHD-----------EASKSAAQLAQNPEL  1389

Query  1086  IAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLE  1125
             +AE KLLRQ K  LE RM  L++  ++L  QL  L  LL+
Sbjct  1390  LAELKLLRQRKDELELRMSALQESRRELMVQLEGLMNLLK  1509


>dbj|AB209102.1| Homo sapiens mRNA for dystrobrevin alpha isoform 2 variant protein
Length=6015

 Score =  199 bits (506),  Expect = 8e-48, Method: Compositional matrix adjust.
 Identities = 181/611 (29%), Positives = 290/611 (47%), Gaps = 71/611 (11%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQH---NLKQNDQPMDILQIINC  693
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++   NL  N + +++ ++   
Sbjct  376   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTE-LNVSRLEAV  552

Query  694   LTTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHL  751
             L+TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   +
Sbjct  553   LSTIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKI  732

Query  752   EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN  811
              DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   +
Sbjct  733   MDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---S  897

Query  812   NKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  869
              + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  
Sbjct  898   QQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQ  1077

Query  870   KHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFA--  927
             +  NY +CQ CF+ G     H   + M EY +        +  AK L N        A  
Sbjct  1078  QCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASS  1236

Query  928   KHPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYLND  984
             + P     P Q     +        P  S +DT   HS           + +S   ++  
Sbjct  1237  REPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHS-----------VPSSGSPFITR  1383

Query  985   S-ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADL  1040
             S +  +  +D+EH LI  Y   L  +S  SQP   RS   I  ++++ +  +  +++A+L
Sbjct  1384  SMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANK--QQRQLIAEL  1557

Query  1041  EEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLE  1100
             E +NR +  E  RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE
Sbjct  1558  ENKNREILQEIQRLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELE  1707

Query  1101  ARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVG  1160
              RM  L++  ++L  QL  L +LL+   A     G+  SSPS ++ R     PM +R   
Sbjct  1708  QRMSALQESRRELMVQLEGLMKLLKTQGA-----GSPRSSPSHTISRPI---PMPIRSAS  1863

Query  1161  SQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV-GSLFHMADDLGRAMESL  1219
             + ++ +         PQD+ TG   V   +  +F  S   N+   L   AD +   M SL
Sbjct  1864  ACSTPTHT-------PQDSLTG---VGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSL  2013

Query  1220  VSVMTDEEGAE  1230
             V  +  E G+E
Sbjct  2014  VKELNSEVGSE  2046


>dbj|AB463020.1| Synthetic construct DNA, clone: pF1KB3754, Homo sapiens DTNA 
gene for dystrobrevin, alpha, without stop codon, in Flexi system
Length=2066

 Score =  199 bits (506),  Expect = 9e-48, Method: Compositional matrix adjust.
 Identities = 181/611 (29%), Positives = 290/611 (47%), Gaps = 71/611 (11%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQH---NLKQNDQPMDILQIINC  693
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++   NL  N + +++ ++   
Sbjct  85    DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTE-LNVSRLEAV  261

Query  694   LTTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHL  751
             L+TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   +
Sbjct  262   LSTIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKI  441

Query  752   EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN  811
              DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   +
Sbjct  442   MDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---S  606

Query  812   NKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  869
              + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  
Sbjct  607   QQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQ  786

Query  870   KHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFA--  927
             +  NY +CQ CF+ G     H   + M EY +        +  AK L N        A  
Sbjct  787   QCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASS  945

Query  928   KHPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYLND  984
             + P     P Q     +        P  S +DT   HS           + +S   ++  
Sbjct  946   REPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHS-----------VPSSGSPFITR  1092

Query  985   S-ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADL  1040
             S +  +  +D+EH LI  Y   L  +S  SQP   RS   I  ++++ +  +  +++A+L
Sbjct  1093  SMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANK--QQRQLIAEL  1266

Query  1041  EEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLE  1100
             E +NR +  E  RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE
Sbjct  1267  ENKNREILQEIQRLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELE  1416

Query  1101  ARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVG  1160
              RM  L++  ++L  QL  L +LL+   A     G+  SSPS ++ R     PM +R   
Sbjct  1417  QRMSALQESRRELMVQLEGLMKLLKTQGA-----GSPRSSPSHTISRPI---PMPIRSAS  1572

Query  1161  SQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV-GSLFHMADDLGRAMESL  1219
             + ++ +         PQD+ TG   V   +  +F  S   N+   L   AD +   M SL
Sbjct  1573  ACSTPTHT-------PQDSLTG---VGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSL  1722

Query  1220  VSVMTDEEGAE  1230
             V  +  E G+E
Sbjct  1723  VKELNSEVGSE  1755


>gb|EU831672.1| Synthetic construct Homo sapiens clone HAIB:100066701; DKFZo003A0620 
dystrobrevin, alpha protein (DTNA) gene, encodes complete 
protein
Length=2116

 Score =  199 bits (505),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 180/613 (29%), Positives = 292/613 (47%), Gaps = 68/613 (11%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQH---NLKQNDQPMDILQIINC  693
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++   NL  N + +++ ++   
Sbjct  98    DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTE-LNVSRLEAV  274

Query  694   LTTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHL  751
             L+ I+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   +
Sbjct  275   LSAIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKI  454

Query  752   EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN  811
              DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   +
Sbjct  455   MDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---S  619

Query  812   NKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  869
              + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  
Sbjct  620   QQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQ  799

Query  870   KHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFA--  927
             +  NY +CQ CF+ G     H   + M EY +        +  AK L N        A  
Sbjct  800   QCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASS  958

Query  928   KHPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYLND  984
             + P     P Q     +        P  S +DT   HS           + +S   ++  
Sbjct  959   REPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHS-----------VPSSGSPFITR  1105

Query  985   S-ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADL  1040
             S +  +  +D+EH LI  Y   L  +S  SQP   RS   I  ++++++  +  +++A+L
Sbjct  1106  SMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDADK--QQRQLIAEL  1279

Query  1041  EEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLE  1100
             E +NR +  E  RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE
Sbjct  1280  ENKNREILQEIQRLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELE  1429

Query  1101  ARMQILEDHNKQLESQLHRLRQLL--EQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRV  1158
              RM  L++  ++L  QL  L +LL  E+ +   +  G+  SSPS ++ R     PM +R 
Sbjct  1430  QRMSALQESRRELMVQLEGLMKLLKEEELKQGTQGAGSPRSSPSHTISRPI---PMPIRS  1600

Query  1159  VGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV-GSLFHMADDLGRAME  1217
               + ++ +         PQD+ TG   V   +  +F  S   N+   L   AD +   M 
Sbjct  1601  ASACSTPTHT-------PQDSLTG---VGGDVQEAFAQSSRRNLRNDLLVAADSITNTMS  1750

Query  1218  SLVSVMTDEEGAE  1230
             SLV  +  E G+E
Sbjct  1751  SLVKELNSEVGSE  1789


>emb|AL833285.1| Homo sapiens mRNA; cDNA DKFZp451O128 (from clone DKFZp451O128)
Length=6066

 Score =  197 bits (502),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 180/613 (29%), Positives = 291/613 (47%), Gaps = 68/613 (11%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQH---NLKQNDQPMDILQIINC  693
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++   NL  N + +++ ++   
Sbjct  383   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTE-LNVSRLEAV  559

Query  694   LTTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHL  751
             L+ I+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   +
Sbjct  560   LSAIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKI  739

Query  752   EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN  811
              DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   +
Sbjct  740   MDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---S  904

Query  812   NKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  869
              + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  
Sbjct  905   QQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQ  1084

Query  870   KHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFA--  927
             +  NY +CQ CF+ G     H   + M EY +        +  AK L N        A  
Sbjct  1085  QCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASS  1243

Query  928   KHPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYLND  984
             + P     P Q     +        P  S +DT   HS           + +S   ++  
Sbjct  1244  REPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHS-----------VPSSGSPFITR  1390

Query  985   S-ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADL  1040
             S +  +  +D+EH LI  Y   L  +S  SQP   RS   I  ++++ +  +  +++A+L
Sbjct  1391  SMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANK--QQRQLIAEL  1564

Query  1041  EEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLE  1100
             E +NR +  E  RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE
Sbjct  1565  ENKNREILQEIQRLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELE  1714

Query  1101  ARMQILEDHNKQLESQLHRLRQLL--EQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRV  1158
              RM  L++  ++L  QL  L +LL  E+ +   +  G+  SSPS ++ R     PM +R 
Sbjct  1715  QRMSALQESRRELMVQLEGLMKLLKEEELKQGTQGAGSPRSSPSHTISRPI---PMPIRS  1885

Query  1159  VGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV-GSLFHMADDLGRAME  1217
               + ++ +         PQD+ TG   V   +  +F  S   N+   L   AD +   M 
Sbjct  1886  ASACSTPTHT-------PQDSLTG---VGGDVQEAFAQSSRRNLRNDLLVAADSITNTMS  2035

Query  1218  SLVSVMTDEEGAE  1230
             SLV  +  E G+E
Sbjct  2036  SLVKELNSEVGSE  2074


>dbj|AK147359.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1020E04 
product:dystrobrevin alpha, full insert sequence
Length=6171

 Score =  196 bits (499),  Expect = 5e-47, Method: Compositional matrix adjust.
 Identities = 178/613 (29%), Positives = 290/613 (47%), Gaps = 72/613 (11%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  256   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  435

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  436   STIFYQLNKSMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  615

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  616   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  780

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  781   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  960

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK--  928
               NY +CQ CF+ G     H   + M EY +        +  AK L N        A   
Sbjct  961   CHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  1119

Query  929   ---HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYL  982
                HP     P + +     ++T    P  S +DT   HS           + +S   ++
Sbjct  1120  EPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHS-----------VPSSGSPFI  1266

Query  983   NDS-ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILA  1038
               S +  +  +D+EH LI  Y   L  +S  SQP   RS   I  ++++ +  +  +++A
Sbjct  1267  TRSMLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDISFTIDANK--QQRQLIA  1440

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGR  1098
             +LE +NR +  E  RL+ +HE              PT  ++ ++  L+AE +LLRQ K  
Sbjct  1441  ELENKNREILQEIQRLRVEHEQAS----------QPTPEKAQQNPTLLAELRLLRQRKDE  1590

Query  1099  LEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRV  1158
             LE RM  L++  ++L  QL  L +LL+   A      +  SSPS ++ R     PM +R 
Sbjct  1591  LEQRMSALQESRRELMVQLEGLMKLLKTQGA-----SSPRSSPSHTISRPI---PMPIRS  1746

Query  1159  VGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGS-LFHMADDLGRAME  1217
               +  + +         PQD+ TG   V   +  +F  S   N+ S L   AD +   M 
Sbjct  1747  ASACPTPTHT-------PQDSLTG---VGGDVQEAFAQSSRRNLRSDLLVAADSITNTMS  1896

Query  1218  SLVSVMTDEEGAE  1230
             SLV  +  E  +E
Sbjct  1897  SLVKELNSEVASE  1935


>dbj|AK147279.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1006A05 
product:dystrobrevin alpha, full insert sequence
Length=6282

 Score =  196 bits (499),  Expect = 6e-47, Method: Compositional matrix adjust.
 Identities = 180/613 (29%), Positives = 289/613 (47%), Gaps = 72/613 (11%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  367   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  546

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  547   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  726

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  727   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  891

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  892   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  1071

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK--  928
               NY +CQ CF+ G     H   + M EY +        +  AK L N        A   
Sbjct  1072  CHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  1230

Query  929   ---HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYL  982
                HP     P + +     ++T    P  S +DT   HS           + +S   ++
Sbjct  1231  EPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHS-----------VPSSGSPFI  1377

Query  983   NDS-ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILA  1038
               S +  +  +D+EH LI  Y   L  +S  SQP   RS   I  ++++ +  +  +++A
Sbjct  1378  TRSMLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDISFTIDANK--QQRQLIA  1551

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGR  1098
             +LE +NR +  E  RL+ +HE     P P   +  PT         L+AE +LLRQ K  
Sbjct  1552  ELENKNREILQEIQRLRVEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDE  1701

Query  1099  LEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRV  1158
             LE RM  L++  ++L  QL  L +LL+   A      +  SSPS ++ R     PM +R 
Sbjct  1702  LEQRMSALQESRRELMVQLEGLMKLLKTQGA-----SSPRSSPSHTISRPI---PMPIRS  1857

Query  1159  VGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGS-LFHMADDLGRAME  1217
               +  + +         PQD+ TG   V   +  +F  S   N+ S L   AD +   M 
Sbjct  1858  ASACPTPTHT-------PQDSLTG---VGGDVQEAFAQSSRRNLRSDLLVAADSITNTMS  2007

Query  1218  SLVSVMTDEEGAE  1230
             SLV  +  E  +E
Sbjct  2008  SLVKELNSEVASE  2046


>gb|EU831587.1| Synthetic construct Homo sapiens clone HAIB:100066616; DKFZo007A0619 
dystrobrevin, alpha protein (DTNA) gene, encodes complete 
protein
Length=2116

 Score =  196 bits (497),  Expect = 8e-47, Method: Compositional matrix adjust.
 Identities = 180/613 (29%), Positives = 290/613 (47%), Gaps = 68/613 (11%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQH---NLKQNDQPMDILQIINC  693
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++   NL  N + +++ ++   
Sbjct  98    DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTE-LNVSRLEAV  274

Query  694   LTTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHL  751
             L+ I+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   +
Sbjct  275   LSAIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKI  454

Query  752   EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN  811
              DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   +
Sbjct  455   MDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---S  619

Query  812   NKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  869
              + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  
Sbjct  620   QQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQ  799

Query  870   KHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFA--  927
             +  NY +CQ CF+ G     H   + M EY +        +  AK L N        A  
Sbjct  800   QCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASS  958

Query  928   KHPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYLND  984
             + P     P Q     +        P  S +DT   HS           + +S   ++  
Sbjct  959   REPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHS-----------VPSSGSPFITR  1105

Query  985   S-ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADL  1040
             S +  +  +D+EH LI  Y   L  +S  SQP   RS   I  ++++ +  +  ++ A+L
Sbjct  1106  SMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANK--QQRQLTAEL  1279

Query  1041  EEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLE  1100
             E +NR +  E  RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE
Sbjct  1280  ENKNREILQEIQRLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELE  1429

Query  1101  ARMQILEDHNKQLESQLHRLRQLL--EQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRV  1158
              RM  L++  ++L  QL  L +LL  E+ +   +  G+  SSPS ++ R     PM +R 
Sbjct  1430  QRMSALQESRRELMVQLEGLMKLLKEEELKQGTQGAGSPRSSPSHTISRPI---PMPIRS  1600

Query  1159  VGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV-GSLFHMADDLGRAME  1217
               + ++ +         PQD+ TG   V   +  +F  S   N+   L   AD +   M 
Sbjct  1601  ASACSTPTHT-------PQDSLTG---VGGDVQEAFAQSSRRNLRNDLLVAADSITNTMS  1750

Query  1218  SLVSVMTDEEGAE  1230
             SLV  +  E G+E
Sbjct  1751  SLVKELNSEVGSE  1789


>ref|NM_207650.3| Mus musculus dystrobrevin alpha (Dtna), transcript variant 1, 
mRNA
Length=6321

 Score =  194 bits (492),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 179/610 (29%), Positives = 286/610 (46%), Gaps = 69/610 (11%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  415   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  594

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  595   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  774

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  775   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  939

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  940   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  1119

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFA--K  928
               NY +CQ CF+ G     H   + M EY +        +  AK L N        A  +
Sbjct  1120  CHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  1278

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYLNDS  985
              P     P Q     +        P  S +DT   HS           + +S   ++  S
Sbjct  1279  EPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHS-----------VPSSGSPFITRS  1425

Query  986   -ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADLE  1041
              +  +  +D+EH LI  Y   L  +S  SQP   RS   I  ++++ +  +  +++A+LE
Sbjct  1426  MLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDISFTIDANK--QQRQLIAELE  1599

Query  1042  EENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEA  1101
              +NR +  E  RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE 
Sbjct  1600  NKNREILQEIQRLRVEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELEQ  1749

Query  1102  RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGS  1161
             RM  L++  ++L  QL  L +LL+   A      +  SSPS ++ R     PM +R   +
Sbjct  1750  RMSALQESRRELMVQLEGLMKLLKTQGA-----SSPRSSPSHTISRPI---PMPIRSASA  1905

Query  1162  QTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGS-LFHMADDLGRAMESLV  1220
               + +         PQD+ TG   V   +  +F  S   N+ S L   AD +   M SLV
Sbjct  1906  CPTPTHT-------PQDSLTG---VGGDVQEAFAQSSRRNLRSDLLVAADSITNTMSSLV  2055

Query  1221  SVMTDEEGAE  1230
               +  E  +E
Sbjct  2056  KELNSEVASE  2085


>gb|BC040364.1| Mus musculus dystrobrevin alpha, mRNA (cDNA clone MGC:25316 IMAGE:4505583), 
complete cds
Length=3195

 Score =  194 bits (492),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 179/610 (29%), Positives = 286/610 (46%), Gaps = 69/610 (11%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  388   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  567

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  568   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  747

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  748   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  912

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  913   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  1092

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFA--K  928
               NY +CQ CF+ G     H   + M EY +        +  AK L N        A  +
Sbjct  1093  CHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  1251

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYLNDS  985
              P     P Q     +        P  S +DT   HS           + +S   ++  S
Sbjct  1252  EPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHS-----------VPSSGSPFITRS  1398

Query  986   -ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADLE  1041
              +  +  +D+EH LI  Y   L  +S  SQP   RS   I  ++++ +  +  +++A+LE
Sbjct  1399  MLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDISFTIDANK--QQRQLIAELE  1572

Query  1042  EENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEA  1101
              +NR +  E  RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE 
Sbjct  1573  NKNREILQEIQRLRVEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELEQ  1722

Query  1102  RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGS  1161
             RM  L++  ++L  QL  L +LL+   A      +  SSPS ++ R     PM +R   +
Sbjct  1723  RMSALQESRRELMVQLEGLMKLLKTQGA-----SSPRSSPSHTISRPI---PMPIRSASA  1878

Query  1162  QTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGS-LFHMADDLGRAMESLV  1220
               + +         PQD+ TG   V   +  +F  S   N+ S L   AD +   M SLV
Sbjct  1879  CPTPTHT-------PQDSLTG---VGGDVQEAFAQSSRRNLRSDLLVAADSITNTMSSLV  2028

Query  1221  SVMTDEEGAE  1230
               +  E  +E
Sbjct  2029  KELNSEVASE  2058


>ref|XM_002212046.1| Branchiostoma floridae hypothetical protein (BRAFLDRAFT_74425) 
mRNA, complete cds
Length=2184

 Score =  193 bits (491),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 99/245 (40%), Positives = 155/245 (63%), Gaps = 1/245 (0%)
 Frame = +1

Query  8     EVPAL-ADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQ  66
             ++P++  DF+++  EL DWL LLD ++KSQ V VGD+E+I EMIIKQK  + DL+ ++PQ
Sbjct  1357  DMPSMYPDFDKSVAELRDWLMLLDHMLKSQIVTVGDVEEIEEMIIKQKTVLNDLDVKKPQ  1536

Query  67    LEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWL  126
             L+ ++ A + L         + ++ ++++RIQ QWDE    +  R+++L+ ML D   W 
Sbjct  1537  LDTVVAAGRRLIQTADTDSDKQLLKEKVDRIQEQWDEASTRVGARKRELDNMLTDCHHWD  1716

Query  127   EAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALK  186
             E +E+  + L QA  ++E   E   TVD + K+I + K+   +LRQWQ +++  NDLA K
Sbjct  1717  ELREDVSRWLEQAEQQVEHDSEVGQTVDVLDKQIAQHKEFMDNLRQWQPSIEAVNDLAQK  1896

Query  187   LLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
             L+ DYS DDT K+  + + IN  W+ ++ R  ER+  L+     LQ+F L LE+FLAWL+
Sbjct  1897  LISDYSNDDTSKIKQMIDRINGRWQQLNNRCRERQQNLKNALEKLQKFSLQLEEFLAWLS  2076

Query  247   EAETT  251
             EAE  
Sbjct  2077  EAEAA  2091


 Score = 50.8 bits (120),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 125/287 (43%), Gaps = 34/287 (11%)
 Frame = +1

Query  281  LQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHL  340
            LQ  IE H      L+ N Q+I+     S DA LL+ +LD +N +W  L  +  + +  L
Sbjct  106  LQDGIEKHRKQVEGLNANGQEIVEQC-TSIDATLLREKLDGLNRRWRVLCAEVNDRKERL  282

Query  341  EASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEP  400
            E +S Q +     + ELL WL+  +  L++Q       PA + Q       +  L+  + 
Sbjct  283  EEASMQTEEFQEEIDELLFWLEDTEGILNKQV-----CPADEDQ------LEEALEKVKD  429

Query  401  VIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNL  460
             +   LE V++    +  EG+      P E    E A    ++  +  E +  +     +
Sbjct  430  QLEEALEKVKV--RHRQTEGILNKQMCPTEEDQLEEALEKVKVRHRHTEGIRNK----QV  591

Query  461  HSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKA  520
              AD             +L+EA +++ ++ RQ E I        D   D L++ LEKVK 
Sbjct  592  CPAD-----------EDQLEEALEKVKVRHRQTEGILNKQVCPADE--DQLEEALEKVKD  732

Query  521  LRGEIAPLKENVSHVNDLA-RQLTTLGIQ--LSPYNLSTLEDLNTRW  564
               ++   ++NV+ +N    R +TT G    L       +++LNTRW
Sbjct  733  KENDLGSRQDNVNTINQTGNRIMTTPGASKALVSNVKKKVDNLNTRW  873


>gb|AY525164.1| Gallus gallus clone Dp71shoA putative short dystrophin mRNA, 
partial cds
Length=277

 Score =  193 bits (491),  Expect = 5e-46, Method: Compositional matrix adjust.
 Identities = 85/92 (92%), Positives = 91/92 (98%), Gaps = 0/92 (0%)
 Frame = +2

Query  562  TRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTT  621
            TRWK+LQVA+++R+RQLHEAHRDFGP SQHFL+TSVQGPWERAISPNKVPYYINHETQTT
Sbjct  2    TRWKVLQVAIDERIRQLHEAHRDFGPTSQHFLTTSVQGPWERAISPNKVPYYINHETQTT  181

Query  622  CWDHPKMTELYQSLADLNNVRFSAYRTAMKLR  653
            CWDHPKMTELYQSLADLNNVRFSAYRTAMKLR
Sbjct  182  CWDHPKMTELYQSLADLNNVRFSAYRTAMKLR  277


>dbj|AK131649.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched 
library, clone:1520403D02 product:dystrobrevin alpha, 
full insert sequence
Length=2983

 Score =  193 bits (491),  Expect = 5e-46, Method: Compositional matrix adjust.
 Identities = 177/610 (29%), Positives = 287/610 (47%), Gaps = 69/610 (11%)
 Frame = +3

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  192   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  371

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  372   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  551

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  552   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  716

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  717   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  896

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFA--K  928
               NY +CQ CF+ G     H   + M EY +        +  AK L N        A  +
Sbjct  897   CHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  1055

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYLNDS  985
              P     P Q     +        P  S +DT   HS           + +S   ++  S
Sbjct  1056  EPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHS-----------VPSSGSPFITRS  1202

Query  986   -ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADLE  1041
              +  +  +D+EH LI  Y   L  +S  SQP   RS   I  ++++ +  +  +++A+LE
Sbjct  1203  MLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDISFTIDANK--QQRQLIAELE  1376

Query  1042  EENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEA  1101
              +NR +  E  RL+ +HE              PT  ++ ++  L+AE +LLRQ K  LE 
Sbjct  1377  NKNREILQEIQRLRVEHEQAS----------QPTPEKAQQNPTLLAELRLLRQRKDELEQ  1526

Query  1102  RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGS  1161
             RM  L++  ++L  QL  L +LL+   A      +  SSPS ++ R     PM +R   +
Sbjct  1527  RMSALQESRRELMVQLEGLMKLLKTQGA-----SSPRSSPSHTISRPI---PMPIRSASA  1682

Query  1162  QTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGS-LFHMADDLGRAMESLV  1220
               + +         PQD+ TG   V   +  +F  S   N+ S L   AD +   M SLV
Sbjct  1683  CPTPTHT-------PQDSLTG---VGGDVQEAFAQSSRRNLRSDLLVAADSITNTMSSLV  1832

Query  1221  SVMTDEEGAE  1230
               +  E  +E
Sbjct  1833  KELNSEVASE  1862


>gb|AF063193.1|AF063193 Gallus gallus dystrophin mRNA, partial cds
Length=321

 Score =  193 bits (490),  Expect = 5e-46, Method: Compositional matrix adjust.
 Identities = 94/107 (87%), Positives = 94/107 (87%), Gaps = 13/107 (12%)
 Frame = +1

Query  898  EYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET---------  948
            EYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET         
Sbjct  1    EYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWP  180

Query  949  ----PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNES  991
                PASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNES
Sbjct  181  VDSAPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNES  321


>gb|U46744.1|HSU46744 Human dystrobrevin-alpha mRNA, complete cds
Length=2518

 Score =  192 bits (489),  Expect = 8e-46, Method: Compositional matrix adjust.
 Identities = 178/614 (28%), Positives = 287/614 (46%), Gaps = 74/614 (12%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQH---NLKQNDQPMDILQIINC  693
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++   NL  N + +++ ++   
Sbjct  140   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTE-LNVSRLEAV  316

Query  694   LTTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHL  751
             L+TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   +
Sbjct  317   LSTIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKI  496

Query  752   EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN  811
              DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   +
Sbjct  497   MDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---S  661

Query  812   NKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  869
              + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  
Sbjct  662   QQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQ  841

Query  870   KHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK-  928
             +  NY +CQ CF+ G     H   + M EY +        +  AK L N        A  
Sbjct  842   QCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASS  1000

Query  929   ----HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSY  981
                 HP     P + +     ++T    P  S +DT   HS           + +S   +
Sbjct  1001  REPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHS-----------VPSSGSPF  1147

Query  982   LNDS-ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERIL  1037
             +  S +  +  +D+EH LI  Y   L  +S  SQP   RS   I  ++++ +  +  +++
Sbjct  1148  ITRSMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANK--QQRQLI  1321

Query  1038  ADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKG  1097
             A+LE +NR +  E  RL+ +HE     P P   +  PT         L+AE +LLRQ K 
Sbjct  1322  AELENKNREILQEIQRLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKD  1471

Query  1098  RLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLR  1157
              LE RM  L++  ++L  QL  L +LL       K  G+     S+         PM +R
Sbjct  1472  ELEQRMSALQESRRELMVQLEGLMKLL-------KTQGSGTHR-SSRSHSISRPIPMPIR  1627

Query  1158  VVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV-GSLFHMADDLGRAM  1216
                + ++ +         PQD+ TG   V   +  +F  S   N+   L   AD +   M
Sbjct  1628  SASACSTPTHT-------PQDSLTG---VGGDVQEAFAQSSRRNLRNDLLVAADSITNTM  1777

Query  1217  ESLVSVMTDEEGAE  1230
              SLV  +  E G+E
Sbjct  1778  SSLVKELNSEVGSE  1819


>ref|XM_001369093.1| PREDICTED: Monodelphis domestica similar to dystrobrevin, alpha,, 
transcript variant 6 (LOC100023710), mRNA
Length=1542

 Score =  192 bits (487),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 155/517 (29%), Positives = 257/517 (49%), Gaps = 55/517 (10%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  76    DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  255

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  256   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  435

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R  L L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  436   DKLRYIFSMISDSSGVMVYGRYDLFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  600

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  601   QKKVTLNAFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  780

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK--  928
               NY +CQ CF+ G  +  H   + M EY +        +  AK L N        A   
Sbjct  781   CHNYQLCQDCFWRGHASGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  939

Query  929   ---HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYL  982
                HP     P + +     ++T    P  S +DT   HS           + +S   ++
Sbjct  940   EPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHS-----------VPSSGSPFI  1086

Query  983   NDSI--SPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERIL  1037
               S+  SPN  +D+EH LI  Y   L  ++  +QP   R P+ I  ++++ +  +  +++
Sbjct  1087  TRSMLDSPNR-LDEEHRLIARYAARLAAETSSTQPSQQRGPSDISFTIDANK--QQRQLI  1257

Query  1038  ADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKG  1097
             A+LE +NR +  E  RL+ +HE     P P   +  PT         L+AE +LLRQ K 
Sbjct  1258  AELENKNREILQEIQRLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKD  1407

Query  1098  RLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVN  1134
              LE RM  L++  ++L  QL  L +LL++ + +  V+
Sbjct  1408  ELEQRMSALQESRRELMVQLEGLMKLLKEEELKQGVS  1518


>ref|XM_613774.4| PREDICTED: Bos taurus similar to dystrobrevin, beta, transcript 
variant 1 (DTNB), mRNA
Length=2241

 Score =  191 bits (486),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 170/621 (27%), Positives = 282/621 (45%), Gaps = 80/621 (12%)
 Frame = +3

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  81    NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHSTEISVSRLETVI  260

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  261   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  434

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  435   MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  602

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  603   -QQKKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  779

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEY-------------------CTPTTSGEDV  909
              +  NY +CQ+CF+ G  +  H   + M E+                   C PT      
Sbjct  780   QQCHNYQLCQNCFWRGHASGPHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPTREPPHP  959

Query  910   RDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHD------DTHSR  963
               F +  +            P                 TP    Q S D      D H+ 
Sbjct  960   -VFPEQPEKPLDLANIVPPRPPTNLNDTMVSHMSSGAPTPTKRLQYSQDIPSHLADEHAL  1136

Query  964   IEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILI  1023
             I  Y +RL      + + + DS S    +D+EH LI  Y   L  ++  +  R P  +  
Sbjct  1137  IASYVARL-----QHCARVLDSPS---RLDEEHRLIARYAARLAAEAG-NMTRPPTDLSF  1289

Query  1024  SLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDA  1083
             + ++ +  +  +++A+LE +NR +  E  RL+ +HE              PT  ++ ++ 
Sbjct  1290  NFDANK--QQRQLIAELENKNREILQEIQRLRLEHEQAS----------QPTPEKAQQNP  1433

Query  1084  ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLL---EQPQAEAKVNGTTVSS  1140
              L+AE +LLRQ K  LE RM  L++  ++L  QL  L +LL   EQ QA A+  G+  +S
Sbjct  1434  TLLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKEEEQKQA-AQATGSPHTS  1610

Query  1141  PSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGH  1200
             P+    R     PM +R   + ++ +         PQD  +G+   M++   +F      
Sbjct  1611  PTHGGGRPI---PMPVRSTSAGSTPTHC-------PQDPLSGVGGDMQE---AFAQGTRR  1751

Query  1201  NV-GSLFHMADDLGRAMESLV  1220
             N+   L   AD +   M SLV
Sbjct  1752  NLRNDLLVAADSITNTMSSLV  1814


>ref|XM_001054487.1| PREDICTED: Rattus norvegicus similar to dystrobrevin alpha isoform 
1 (predicted), transcript variant 6 (RGD1561985_predicted), 
mRNA
Length=3485

 Score =  191 bits (485),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 163/565 (28%), Positives = 273/565 (48%), Gaps = 68/565 (12%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  409   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  588

Query  695   TTIYDRLEQE--HNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +T++ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  589   STMFYQLNKRMPSTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  768

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  769   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  933

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  934   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  1113

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK--  928
               NY +CQ CF+ G     H   + M EY +        +  AK L N        A   
Sbjct  1114  CHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  1272

Query  929   ---HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYL  982
                HP     P + +     ++T    P  S +DT   HS           + +S   ++
Sbjct  1273  EPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHS-----------VPSSGSPFI  1419

Query  983   NDS-ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILA  1038
               S +  +  +D+EH LI  Y   L  +S  SQP   RS   +  ++++ +  +  +++A
Sbjct  1420  TRSMLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDVSFTIDANK--QQRQLIA  1593

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGR  1098
             +LE +NR +  E  RL+ +HE              PT  ++ ++  L+AE +LLRQ K  
Sbjct  1594  ELENKNREILQEIQRLRVEHEQAS----------QPTPEKAQQNPTLLAELRLLRQRKDE  1743

Query  1099  LEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRV  1158
             LE RM  L++  ++L  QL  L +LL+   A     G+  SSPS ++ R     PM +R 
Sbjct  1744  LEQRMSALQESRRELMVQLEGLMKLLKTQGA-----GSPRSSPSHTISRPI---PMPIRS  1899

Query  1159  VGSQTSDSMGEEDLLSPPQDTSTGL  1183
               + ++ +         PQD+ TG+
Sbjct  1900  TSACSTPAYT-------PQDSLTGV  1953


>ref|XM_001054433.1| PREDICTED: Rattus norvegicus similar to dystrobrevin alpha isoform 
1 (predicted), transcript variant 5 (RGD1561985_predicted), 
mRNA
Length=3497

 Score =  191 bits (485),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 163/565 (28%), Positives = 273/565 (48%), Gaps = 68/565 (12%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  421   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  600

Query  695   TTIYDRLEQE--HNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +T++ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  601   STMFYQLNKRMPSTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  780

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  781   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  945

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  946   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  1125

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK--  928
               NY +CQ CF+ G     H   + M EY +        +  AK L N        A   
Sbjct  1126  CHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  1284

Query  929   ---HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYL  982
                HP     P + +     ++T    P  S +DT   HS           + +S   ++
Sbjct  1285  EPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHS-----------VPSSGSPFI  1431

Query  983   NDS-ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILA  1038
               S +  +  +D+EH LI  Y   L  +S  SQP   RS   +  ++++ +  +  +++A
Sbjct  1432  TRSMLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDVSFTIDANK--QQRQLIA  1605

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGR  1098
             +LE +NR +  E  RL+ +HE              PT  ++ ++  L+AE +LLRQ K  
Sbjct  1606  ELENKNREILQEIQRLRVEHEQAS----------QPTPEKAQQNPTLLAELRLLRQRKDE  1755

Query  1099  LEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRV  1158
             LE RM  L++  ++L  QL  L +LL+   A     G+  SSPS ++ R     PM +R 
Sbjct  1756  LEQRMSALQESRRELMVQLEGLMKLLKTQGA-----GSPRSSPSHTISRPI---PMPIRS  1911

Query  1159  VGSQTSDSMGEEDLLSPPQDTSTGL  1183
               + ++ +         PQD+ TG+
Sbjct  1912  TSACSTPAYT-------PQDSLTGV  1965


>ref|XM_001054380.1| PREDICTED: Rattus norvegicus similar to dystrobrevin alpha isoform 
1 (predicted), transcript variant 4 (RGD1561985_predicted), 
mRNA
Length=3404

 Score =  191 bits (485),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 163/565 (28%), Positives = 273/565 (48%), Gaps = 68/565 (12%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  328   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  507

Query  695   TTIYDRLEQE--HNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +T++ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  508   STMFYQLNKRMPSTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  687

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  688   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  852

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  853   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  1032

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK--  928
               NY +CQ CF+ G     H   + M EY +        +  AK L N        A   
Sbjct  1033  CHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  1191

Query  929   ---HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYL  982
                HP     P + +     ++T    P  S +DT   HS           + +S   ++
Sbjct  1192  EPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHS-----------VPSSGSPFI  1338

Query  983   NDS-ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILA  1038
               S +  +  +D+EH LI  Y   L  +S  SQP   RS   +  ++++ +  +  +++A
Sbjct  1339  TRSMLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDVSFTIDANK--QQRQLIA  1512

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGR  1098
             +LE +NR +  E  RL+ +HE              PT  ++ ++  L+AE +LLRQ K  
Sbjct  1513  ELENKNREILQEIQRLRVEHEQAS----------QPTPEKAQQNPTLLAELRLLRQRKDE  1662

Query  1099  LEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRV  1158
             LE RM  L++  ++L  QL  L +LL+   A     G+  SSPS ++ R     PM +R 
Sbjct  1663  LEQRMSALQESRRELMVQLEGLMKLLKTQGA-----GSPRSSPSHTISRPI---PMPIRS  1818

Query  1159  VGSQTSDSMGEEDLLSPPQDTSTGL  1183
               + ++ +         PQD+ TG+
Sbjct  1819  TSACSTPAYT-------PQDSLTGV  1872


>ref|XM_001054793.1| PREDICTED: Rattus norvegicus similar to dystrobrevin alpha isoform 
1 (predicted), transcript variant 11 (RGD1561985_predicted), 
mRNA
Length=3333

 Score =  191 bits (485),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 163/565 (28%), Positives = 273/565 (48%), Gaps = 68/565 (12%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  257   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  436

Query  695   TTIYDRLEQE--HNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +T++ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  437   STMFYQLNKRMPSTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  616

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  617   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  781

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  782   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  961

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK--  928
               NY +CQ CF+ G     H   + M EY +        +  AK L N        A   
Sbjct  962   CHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  1120

Query  929   ---HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYL  982
                HP     P + +     ++T    P  S +DT   HS           + +S   ++
Sbjct  1121  EPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHS-----------VPSSGSPFI  1267

Query  983   NDS-ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILA  1038
               S +  +  +D+EH LI  Y   L  +S  SQP   RS   +  ++++ +  +  +++A
Sbjct  1268  TRSMLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDVSFTIDANK--QQRQLIA  1441

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGR  1098
             +LE +NR +  E  RL+ +HE              PT  ++ ++  L+AE +LLRQ K  
Sbjct  1442  ELENKNREILQEIQRLRVEHEQAS----------QPTPEKAQQNPTLLAELRLLRQRKDE  1591

Query  1099  LEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRV  1158
             LE RM  L++  ++L  QL  L +LL+   A     G+  SSPS ++ R     PM +R 
Sbjct  1592  LEQRMSALQESRRELMVQLEGLMKLLKTQGA-----GSPRSSPSHTISRPI---PMPIRS  1747

Query  1159  VGSQTSDSMGEEDLLSPPQDTSTGL  1183
               + ++ +         PQD+ TG+
Sbjct  1748  TSACSTPAYT-------PQDSLTGV  1801


>gb|AF082741.1|AF082741 Gallus gallus dystrophin mRNA, alternatively spliced, partial 
cds
Length=509

 Score =  191 bits (484),  Expect = 3e-45, Method: Compositional matrix adjust.
 Identities = 91/100 (91%), Positives = 100/100 (100%), Gaps = 0/100 (0%)
 Frame = +1

Query  1128  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVM  1187
             QA+AKVNGTT+SSPSTSLQRSDSSQPMLLRVVGSQTS++MGE+DLLSPPQDTSTGLEEVM
Sbjct  1     QADAKVNGTTLSSPSTSLQRSDSSQPMLLRVVGSQTSETMGEDDLLSPPQDTSTGLEEVM  180

Query  1188  EQLNNSFPSSRGHNVGSLFHMADDLGRAMESLVSVMTDEE  1227
             EQLNNSFPSSRGHNVGSLFHMADDLGRAME+LV+VMTD++
Sbjct  181   EQLNNSFPSSRGHNVGSLFHMADDLGRAMETLVTVMTDDK  300


>gb|BC068718.1| Xenopus laevis hypothetical protein MGC81161, mRNA (cDNA clone 
MGC:81161 IMAGE:6318045), complete cds
Length=3932

 Score =  190 bits (482),  Expect = 5e-45, Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 235/492 (47%), Gaps = 37/492 (7%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRT+ KLR +QK   L L+ +    +AL +++L   D    +++ ++   L
Sbjct  205   DLDRIRLSTYRTSCKLRFVQKKGNLHLVDVWNIIEALRENSLNNVDPNVELNVARLEAVL  384

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + +NV   + + LN+LL  YD    G+I + + K  + +LC   + 
Sbjct  385   STIFYQLNKRMPTTHQINVEQSISLMLNFLLAAYDLEGHGKITLFAVKMALATLCGGKIM  564

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY++  ++ S G     R    L + +++P  + E  SFG +  E + RSCF   + 
Sbjct  565   DKLRYIYSMISDSNGVMVYERYDQFLREVLKLPTAVFEGPSFGYT--EQAARSCF---SQ  729

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  730   QKKVTLNSFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  909

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHP  930
               NY +CQ CF+ G  +  H   + M EY   T+     +  +  L           + P
Sbjct  910   CHNYQLCQDCFWRGHASGSHNNQHQMKEY---TSWKSPAKKLSTALSKSLSCAS--NREP  1074

Query  931   RMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISPNE  990
                  P Q     +        P  S +D         +  ++   S+GS   + I P+ 
Sbjct  1075  LHPMFPDQPEKPLNLAHIVPPRPVNSMND---------NIFSQSVPSSGSPFTNKIMPDS  1227

Query  991   S--IDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQ  1048
                +D+EH LI  Y   L  ++  SQ +  A   IS   +   +  +++A+LE +NR + 
Sbjct  1228  PSRLDEEHRLIARYAARLAAENSSSQVQQRAGTDISFTIDANKQQRQLIAELENKNREIL  1407

Query  1049  AEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILED  1108
              E  RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE RM  L++
Sbjct  1408  QEIQRLRIEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELEQRMSALQE  1557

Query  1109  HNKQLESQLHRL  1120
               ++L  QL  L
Sbjct  1558  SRRELMVQLEGL  1593


>gb|BC121459.1| Xenopus tropicalis dystrobrevin alpha, mRNA (cDNA clone MGC:146484 
IMAGE:7793528), complete cds
Length=2499

 Score =  189 bits (481),  Expect = 6e-45, Method: Compositional matrix adjust.
 Identities = 140/491 (28%), Positives = 236/491 (48%), Gaps = 38/491 (7%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL +++L   D    +++ ++   L
Sbjct  245   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNIIEALRENSLNNVDPNVELNVARLEAVL  424

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +T++ +L +     + +NV   + + LN+LL  YD+   G+I V + K  + +LC   + 
Sbjct  425   STVFFQLNKRMPTTHQINVEQSISLMLNFLLTAYDSEGHGKITVFAVKMALATLCGGKIM  604

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY++  ++ + G     R    L + +++P  + E  SFG +  E + RSCF   + 
Sbjct  605   DKLRYIYSMISDTNGMMVYGRYDQFLREVLKLPTAIFEGPSFGYT--EQAARSCF---SQ  769

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  770   QKKVTLNSFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  949

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK-H  929
               NY +CQ CF+ G  +  H   + M EY   T+     +  +  L             H
Sbjct  950   CHNYQLCQDCFWRGHASGSHSNQHQMKEY---TSWKSPAKKLSTALSKSLSCASSREPLH  1120

Query  930   PRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSI---  986
             P     P + +     ++T    P  S +D         +  +     +GS   + I   
Sbjct  1121  PMFPDQPEKPLNLAHIVDTWPPRPVTSMND---------NIFSHSVPCSGSPFTNKIMLD  1273

Query  987   SPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRN  1046
             SP+  +D+EH LI  Y   L  ++  +Q +      IS   +   +  +++A+LE +NR 
Sbjct  1274  SPSR-LDEEHRLIARYAARLAAENSSAQAQQRGGADISFTIDANKQQRQLIAELENKNRE  1450

Query  1047  LQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQIL  1106
             +  E  RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE RM  L
Sbjct  1451  ILQEIQRLRIEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELEQRMSAL  1600

Query  1107  EDHNKQLESQL  1117
             ++  ++L  QL
Sbjct  1601  QESRRELMVQL  1633


>ref|XM_419187.2| PREDICTED: Gallus gallus similar to dystrobrevin alpha (LOC421104), 
mRNA
Length=3293

 Score =  189 bits (481),  Expect = 7e-45, Method: Compositional matrix adjust.
 Identities = 184/657 (28%), Positives = 299/657 (45%), Gaps = 104/657 (15%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQP--MDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   +
Sbjct  76    DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPSIELNVARLEAVI  255

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + +NV   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  256   STIFYQLNKRMPTTHQINVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  435

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     +  L L + +++P  + E  SFG +  E S +SCF   + 
Sbjct  436   DKLRYIFSMISDSSGVMVYGKYDLFLREVLKLPTAVFEGPSFGYT--EQSAKSCF---SQ  600

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  601   QKKVTLNTFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  780

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK--  928
               NY +CQ CF+ G  +  H   + M EY +        +  AK L N        A   
Sbjct  781   CHNYQLCQDCFWRGHASGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  939

Query  929   ---HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HS--RIEHYASRLAEMENSN--  978
                HP     P + +     ++T    P  S +DT   HS      +A+R +  +N++  
Sbjct  940   EPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHSVPSGSPFANRSSPSKNTDVE  1119

Query  979   --------------GSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLS-----------  1013
                           G  L  S+   + + DEH+LI  Y   L Q +P             
Sbjct  1120  QSKLLARAAPAFLKGKGLQYSLDVADRLADEHVLIGLYVNML-QSNPARVLDSASRLDEE  1296

Query  1014  -------QPRSPAQILISLESEERGELE------------RILADLEEENRNLQAEYDRL  1054
                      R  A+   S ++++RG  +            +++A+LE +NR +  E  RL
Sbjct  1297  HKLIARYAARLAAETSSSQQAQQRGAADISFTIDANKQQRQLIAELENKNREILQEIQRL  1476

Query  1055  KQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLE  1114
             + +HE     P P   +  PT         L+AE +LLRQ K  LE RM  L++  ++L 
Sbjct  1477  RLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELEQRMSALQESRRELM  1626

Query  1115  SQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLS  1174
              QL  L +LL+   A     G+  SSPS ++ R     PM +R   + ++ +        
Sbjct  1627  VQLEGLMKLLKTQGA-----GSPRSSPSHTISR---PIPMPIRSASACSTPTHT------  1764

Query  1175  PPQDTSTGLEEVMEQLNNSFPSSRGHNV-GSLFHMADDLGRAMESLVSVMTDEEGAE  1230
              PQD+ TG   V   +  +F  S   N+   L   AD +   M SLV  +  E G+E
Sbjct  1765  -PQDSLTG---VGGDVQEAFAQSARRNLRNDLLVAADSITNTMSSLVKELNSEVGSE  1923


>gb|BC050765.1| Mus musculus dystrobrevin alpha, mRNA (cDNA clone MGC:58284 IMAGE:6533769), 
complete cds
Length=2716

 Score =  189 bits (480),  Expect = 8e-45, Method: Compositional matrix adjust.
 Identities = 176/611 (28%), Positives = 283/611 (46%), Gaps = 68/611 (11%)
 Frame = +3

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  207   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  386

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  387   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  566

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  567   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  731

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  732   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  911

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFA--K  928
               NY +CQ CF+ G     H   + M EY +        +  AK L N        A  +
Sbjct  912   CHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  1070

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYLNDS  985
              P     P Q     +        P  S +DT   HS           + +S   ++  S
Sbjct  1071  EPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHS-----------VPSSGSPFITRS  1217

Query  986   -ISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQIL----ISLESEERGELERILADL  1040
              +  +  +D+EH LI  Y   L  +S  S  + P Q      IS   +   +  +++A+L
Sbjct  1218  MLESSNRLDEEHRLIARYAARLAAESSSSVLQQPTQQRSAPDISFTIDANKQQRQLIAEL  1397

Query  1041  EEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLE  1100
             E +NR +  E  RL+ +HE              PT  ++ ++  L+AE +LLRQ K  LE
Sbjct  1398  ENKNREILQEIQRLRVEHEQAS----------QPTPEKAQQNPTLLAELRLLRQRKDELE  1547

Query  1101  ARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVG  1160
              RM  L++  ++L  QL  L +LL+   A      +  SSPS ++ R     PM +R   
Sbjct  1548  QRMSALQESRRELMVQLEGLMKLLKTQGA-----SSPRSSPSHTISRPI---PMPIRSAS  1703

Query  1161  SQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGS-LFHMADDLGRAMESL  1219
             +  + +         PQD+ TG   V   +  +F  S   N+ S L   AD +   M SL
Sbjct  1704  ACPTPTHT-------PQDSLTG---VGGDVQEAFAQSSRRNLRSDLLVAADSITNTMSSL  1853

Query  1220  VSVMTDEEGAE  1230
             V  +  E  +E
Sbjct  1854  VKELNSEVASE  1886


>ref|XM_002196755.1| PREDICTED: Taeniopygia guttata similar to dystrobrevin, alpha 
(LOC100230673), mRNA
Length=2576

 Score =  189 bits (479),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 185/654 (28%), Positives = 294/654 (44%), Gaps = 101/654 (15%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQP--MDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   +
Sbjct  76    DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPSIELNVARLEAVI  255

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + +NV   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  256   STIFYQLNKRMPTTHQINVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  435

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R  + L + +++P  + E  SFG +  E S +SCF   + 
Sbjct  436   DKLRYIFSMISDSSGMMVYGRYDMFLREVLKLPTAVFEGPSFGYT--EQSAKSCF---SQ  600

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  601   QKKVTLNTFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  780

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFA--K  928
               NY +CQ CF+ G  +  H   + M EY +        +  AK L N        A  +
Sbjct  781   CHNYQLCQDCFWRGHASGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  939

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HS--RIEHYASRLAEMENS------  977
              P     P Q     +        P  S +DT   HS      +A+R +  +N+      
Sbjct  940   EPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSGSPFANRSSPSKNTEVEQNK  1119

Query  978   ----------NGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLS--------------  1013
                        G  L  S+   + + DEH+LI  Y   L Q SP                
Sbjct  1120  LLARAAPAFLKGKGLQYSLDVADRLADEHVLIGVYVNML-QSSPARVLDSASRLDEEHKL  1296

Query  1014  ----QPRSPAQILISLESEERG------------ELERILADLEEENRNLQAEYDRLKQQ  1057
                   R  A+   S  S++RG            +  +++A+LE +NR +  E  RL+ +
Sbjct  1297  IARYAARLAAETSSSQPSQQRGASDISFTIDANKQQRQLIAELENKNREILQEIQRLRLE  1476

Query  1058  HEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQL  1117
             HE     P P   +  PT         L+AE +LLRQ K  LE RM  L++  ++L  QL
Sbjct  1477  HEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELEQRMSALQESRRELMVQL  1626

Query  1118  HRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQ  1177
               L +LL+   A     G+  SSPS ++ R     PM +R   + ++ +         PQ
Sbjct  1627  EGLMKLLKTQGA-----GSPRSSPSHTISRPI---PMPIRSASACSTPTHA-------PQ  1761

Query  1178  DTSTGLEEVMEQLNNSFPSSRGHNV-GSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             D+ TG   V   +  +F  S   N+   L   AD +   M SLV  +  E G+E
Sbjct  1762  DSLTG---VGGDVQEAFAQSARRNLRNDLLVAADSITNTMSSLVKELNSEVGSE  1914


>emb|X95226.1| M.musculus mRNA for dystrobrevin (clone m24)
Length=2607

 Score =  189 bits (479),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 181/611 (29%), Positives = 288/611 (47%), Gaps = 65/611 (10%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  121   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  300

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  301   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  480

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  481   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  645

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  646   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  825

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFA--K  928
               NY +CQ CF+ G     H   + M EY +        +  AK L N        A  +
Sbjct  826   CHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  984

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYLNDS  985
              P     P Q     +        P  S +DT   HS           + +S   ++  S
Sbjct  985   EPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHS-----------VPSSGSPFITRS  1131

Query  986   -ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADLE  1041
              +  +  +D+EH LI  Y   L  +S  SQP   RS   I  ++++ +  +  +++A+LE
Sbjct  1132  MLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDISFTIDANK--QQRQLIAELE  1305

Query  1042  EENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEA  1101
              +NR +  E  RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE 
Sbjct  1306  NKNREILQEIQRLRVEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELEQ  1455

Query  1102  RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQ-PMLLRVVG  1160
             RM  L++  ++L  QL  L +LL++   E    GT  SSP +S   + S   PM +R   
Sbjct  1456  RMSALQESRRELMVQLEGLMKLLKE---EELKQGTRASSPRSSPSHTISRPIPMPIRSAS  1626

Query  1161  SQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGS-LFHMADDLGRAMESL  1219
             +  + +         PQD+ TG   V   +  +F  S   N+ S L   AD +   M SL
Sbjct  1627  ACPTPTHT-------PQDSLTG---VGGDVQEAFAQSSRRNLRSDLLVAADSITNTMSSL  1776

Query  1220  VSVMTDEEGAE  1230
             V  +  E  +E
Sbjct  1777  VKELNSEVASE  1809


>ref|XM_001054655.1| PREDICTED: Rattus norvegicus similar to dystrobrevin alpha isoform 
1 (predicted), transcript variant 9 (RGD1561985_predicted), 
mRNA
Length=3324

 Score =  188 bits (478),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 159/560 (28%), Positives = 268/560 (47%), Gaps = 61/560 (10%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  257   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  436

Query  695   TTIYDRLEQE--HNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +T++ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  437   STMFYQLNKRMPSTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  616

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  617   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  781

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  782   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  961

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHP  930
               NY +CQ CF+ G     H   + M EY   T+     +     L          ++ P
Sbjct  962   CHNYQLCQDCFWRGHAGGSHSNQHQMKEY---TSWKSPAKKLTNALSKSLSCAS--SREP  1126

Query  931   RMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYLNDS-I  986
                  P Q     +        P  S +DT   HS           + +S   ++  S +
Sbjct  1127  LHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHS-----------VPSSGSPFITRSML  1273

Query  987   SPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADLEEE  1043
               +  +D+EH LI  Y   L  +S  SQP   RS   +  ++++ +  +  +++A+LE +
Sbjct  1274  ESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDVSFTIDANK--QQRQLIAELENK  1447

Query  1044  NRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARM  1103
             NR +  E  RL+ +HE              PT  ++ ++  L+AE +LLRQ K  LE RM
Sbjct  1448  NREILQEIQRLRVEHEQAS----------QPTPEKAQQNPTLLAELRLLRQRKDELEQRM  1597

Query  1104  QILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQT  1163
               L++  ++L  QL  L +LL+   A     G+  SSPS ++ R     PM +R   + +
Sbjct  1598  SALQESRRELMVQLEGLMKLLKTQGA-----GSPRSSPSHTISRPI---PMPIRSTSACS  1753

Query  1164  SDSMGEEDLLSPPQDTSTGL  1183
             + +         PQD+ TG+
Sbjct  1754  TPAYT-------PQDSLTGV  1792


>ref|NM_033148.2| Homo sapiens dystrobrevin, beta (DTNB), transcript variant 3, 
mRNA
Length=2314

 Score =  188 bits (477),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 154/557 (27%), Positives = 266/557 (47%), Gaps = 65/557 (11%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  326   NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  505

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  506   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  679

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  680   MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  847

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  848   -QQRKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  1024

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK  928
              +  NY +CQ+CF+ G     H   + M E+          +  AK L +          
Sbjct  1025  QQCHNYQLCQNCFWRGHAGGPHSNQHQMKEH-------SSWKSPAKKLSHAISKS-----  1168

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSI-S  987
                +G +P +        E P     L+H             L  M ++  S+++  + +
Sbjct  1169  ---LGCVPTREPPHPVFPEQPEKPLDLAHIVP-------PRPLTNMNDTMVSHMSSGVPT  1318

Query  988   PNESI-------DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADL  1040
             P +S+       D+EH LI  Y   L  ++  +  R P  +  + ++ +  +  +++A+L
Sbjct  1319  PTKSVLDSPSRLDEEHRLIARYAARLAAEAG-NVTRPPTDLSFNFDANK--QQRQLIAEL  1489

Query  1041  EEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLE  1100
             E +NR +  E  RL+ +HE              PT  ++ ++  L+AE +LLRQ K  LE
Sbjct  1490  ENKNREILQEIQRLRLEHEQAS----------QPTPEKAQQNPTLLAELRLLRQRKDELE  1639

Query  1101  ARMQILEDHNKQLESQLHRLRQLL---EQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLR  1157
              RM  L++  ++L  QL  L +LL   EQ QA A+  G+  +SP+    R     PM +R
Sbjct  1640  QRMSALQESRRELMVQLEELMKLLKEEEQKQA-AQATGSPHTSPTHGGGR---PMPMPVR  1807

Query  1158  VVGSQTSDSMGEEDLLS  1174
                + ++ +   +D LS
Sbjct  1808  STSAGSTPTHCPQDSLS  1858


>emb|Y12712.1| Homo sapiens mRNA for brain dystrobrevin B
Length=2247

 Score =  188 bits (477),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 154/557 (27%), Positives = 266/557 (47%), Gaps = 65/557 (11%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  259   NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  438

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  439   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  612

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  613   MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  780

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  781   -QQRKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  957

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK  928
              +  NY +CQ+CF+ G     H   + M E+          +  AK L +          
Sbjct  958   QQCHNYQLCQNCFWRGHAGGPHSNQHQMKEH-------SSWKSPAKKLSHAISKS-----  1101

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSI-S  987
                +G +P +        E P     L+H             L  M ++  S+++  + +
Sbjct  1102  ---LGCVPTREPPHPVFPEQPEKPLDLAHIVP-------PRPLTNMNDTMVSHMSSGVPT  1251

Query  988   PNESI-------DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADL  1040
             P +S+       D+EH LI  Y   L  ++  +  R P  +  + ++ +  +  +++A+L
Sbjct  1252  PTKSVLDSPSRLDEEHRLIARYAARLAAEAG-NVTRPPTDLSFNFDANK--QQRQLIAEL  1422

Query  1041  EEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLE  1100
             E +NR +  E  RL+ +HE              PT  ++ ++  L+AE +LLRQ K  LE
Sbjct  1423  ENKNREILQEIQRLRLEHEQAS----------QPTPEKAQQNPTLLAELRLLRQRKDELE  1572

Query  1101  ARMQILEDHNKQLESQLHRLRQLL---EQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLR  1157
              RM  L++  ++L  QL  L +LL   EQ QA A+  G+  +SP+    R     PM +R
Sbjct  1573  QRMSALQESRRELMVQLEELMKLLKEEEQKQA-AQATGSPHTSPTHGGGR---PMPMPVR  1740

Query  1158  VVGSQTSDSMGEEDLLS  1174
                + ++ +   +D LS
Sbjct  1741  STSAGSTPTHCPQDSLS  1791


>dbj|AK308410.1| Homo sapiens cDNA, FLJ98358
Length=2681

 Score =  175 bits (444),  Expect(2) = 2e-44, Method: Compositional matrix adjust.
 Identities = 149/511 (29%), Positives = 236/511 (46%), Gaps = 65/511 (12%)
 Frame = +1

Query  732   GRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEV  791
             G+I V + K  + +LC   + DK RY+F  ++ S+G     R    L + +++P  + E 
Sbjct  700   GKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEG  879

Query  792   ASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKH  849
              SFG +  E S RSCF   + + ++    FLD +  +P  Q +VWLP+LHR+A  E   H
Sbjct  880   PSFGYT--EQSARSCF---SQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFH  1044

Query  850   QAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDV  909
               +C+ C    ++GFRYR  +  NY +CQ CF+ G     H   + M EY +        
Sbjct  1045  PVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------W  1203

Query  910   RDFAKVLKNKFRTKRYFA--KHPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRI  964
             +  AK L N        A  + P     P Q     +        P  S +DT   HS  
Sbjct  1204  KSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHS--  1377

Query  965   EHYASRLAEMENSNGSYLNDS-ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQ  1020
                      + +S   ++  S +  +  +D+EH LI  Y   L  +S  SQP   RS   
Sbjct  1378  ---------VPSSGSPFITRSMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPD  1530

Query  1021  ILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSP  1080
             I  ++++ +  +  +++A+LE +NR +  E  RL+ +HE              PT  ++ 
Sbjct  1531  ISFTIDANK--QQRQLIAELENKNREILQEIQRLRLEHEQAS----------QPTPEKAQ  1674

Query  1081  RDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSS  1140
             ++  L+AE +LLRQ K  LE RM  L++  ++L  QL  L +LL+   A     G+  SS
Sbjct  1675  QNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKTQGA-----GSPRSS  1839

Query  1141  PSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGH  1200
             PS ++ R     PM +R   + ++ +         PQD+ TG   V   +  +F  S   
Sbjct  1840  PSHTISRPI---PMPIRSASACSTPTHT-------PQDSLTG---VGGDVQEAFAQSSRR  1980

Query  1201  NV-GSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             N+   L   AD +   M SLV  +  E G+E
Sbjct  1981  NLRNDLLVAADSITNTMSSLVKELNSEVGSE  2073


 Score = 33.9 bits (76),  Expect(2) = 2e-44, Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
 Frame = +3

Query  637  DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQND--QPMDILQIINCL  694
            DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  402  DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTELNVSRLEAVL  581

Query  695  TTIY  698
            +TI+
Sbjct  582  STIF  593


>ref|XM_001515647.1| PREDICTED: Ornithorhynchus anatinus similar to dystrobrevin, 
alpha,, transcript variant 3 (LOC100079727), mRNA
Length=2232

 Score =  187 bits (476),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 185/659 (28%), Positives = 296/659 (44%), Gaps = 107/659 (16%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  76    DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNVELNVARLEAVL  255

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  256   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  435

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R  L L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  436   DKLRYIFSMISDSSGVMVYGRYDLFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  600

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  601   QKKVTLNAFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  780

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK--  928
               NY +CQ CF+ G  +  H   + M EY +        +  AK L N        A   
Sbjct  781   CHNYQLCQDCFWRGHASGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  939

Query  929   ---HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT------HSRIEHYASRLAEMENS--  977
                HP     P + +     ++T    P  S +DT       S    + +R +  +N+  
Sbjct  940   EPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHSVPSSGSPFITRSSPHQNNEV  1119

Query  978   --------------NGSYLNDSISPNESIDDEHLLIQHYCQSLNQ------DSP------  1011
                            G  L  S+   + + DEH LI  Y   L        DSP      
Sbjct  1120  EQNKLLARAAPSFLKGKGLQYSLDVADRLADEHGLIGLYVNMLQSNPSRMLDSPNRLDEE  1299

Query  1012  ----------------LSQP---RSPAQILISLESEERGELERILADLEEENRNLQAEYD  1052
                              SQP   R  + I  ++++ +  +  +++A+LE +NR +  E  
Sbjct  1300  HRLIARYAARLAAETSSSQPGQQRGASDISFTIDANK--QQRQLIAELENKNREILQEIQ  1473

Query  1053  RLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQ  1112
             RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE RM  L++  ++
Sbjct  1474  RLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELEQRMSALQESRRE  1623

Query  1113  LESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDL  1172
             L  QL  L +LL+   A     G+  SSPS ++ R     PM +R   + ++ +      
Sbjct  1624  LMVQLEGLMKLLKTQGA-----GSPRSSPSHTISR---PIPMPIRSASTCSTPTHT----  1767

Query  1173  LSPPQDTSTGLEEVMEQLNNSFPSSRGHNV-GSLFHMADDLGRAMESLVSVMTDEEGAE  1230
                PQD+ TG   V   +  +F  S   N+   L   AD +   M SLV  +  E G+E
Sbjct  1768  ---PQDSLTG---VGGDVQEAFAQSARRNLRNDLLVAADSITNTMSSLVKELNSEVGSE  1926


>emb|CR619470.1| full-length cDNA clone CS0DK002YG20 of HeLa cells Cot 25-normalized 
of Homo sapiens (human)
Length=2275

 Score =  187 bits (475),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 161/601 (26%), Positives = 279/601 (46%), Gaps = 77/601 (12%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  253   NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  432

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  433   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  606

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  607   MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  774

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  775   -QQRKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  951

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK  928
              +  NY +CQ+CF+ G     H   + M E+          +  AK L +          
Sbjct  952   QQCHNYQLCQNCFWRGHAGGPHSNQHQMKEH-------SSWKSPAKKLSHAISKS-----  1095

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSI-S  987
                +G +P +        E P     L+H             L  M ++  S+++  + +
Sbjct  1096  ---LGCVPTREPPHPVFPEQPEKPLDLAHIVP-------PRPLTNMNDTMVSHMSSGVPT  1245

Query  988   PNESI-------DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADL  1040
             P +S+       D+EH LI  Y   L  ++  +  R P  +  + ++ +  +  +++A+L
Sbjct  1246  PTKSVLDSPSRLDEEHRLIARYAARLAAEAG-NVTRPPTDLSFNFDANK--QQRQLIAEL  1416

Query  1041  EEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLE  1100
             E +NR +  E  RL+ +HE              PT  ++ ++  L+AE +LLRQ K  LE
Sbjct  1417  ENKNREILQEIQRLRLEHEQAS----------QPTPEKAQQNPTLLAELRLLRQRKDELE  1566

Query  1101  ARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVG  1160
              RM  L++  ++L  QL  L +LL     +A+  G+  +SP+    R     PM +R   
Sbjct  1567  QRMSALQESRRELMVQLEELMKLL-----KAQATGSPHTSPTHGGGR---PMPMPVRSTS  1722

Query  1161  SQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV-GSLFHMADDLGRAMESL  1219
             + ++ +         PQD+ +G   V   +  +F      N+   L   AD +   M SL
Sbjct  1723  AGSTPTHC-------PQDSLSG---VGGDVQEAFAQGTRRNLRNDLLVAADSITNTMSSL  1872

Query  1220  V  1220
             V
Sbjct  1873  V  1875


>ref|XM_961904.2| PREDICTED: Tribolium castaneum similar to dystrobrevin (LOC655364), 
mRNA
Length=2358

 Score =  187 bits (474),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 162/578 (28%), Positives = 270/578 (46%), Gaps = 58/578 (10%)
 Frame = +1

Query  641   VRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIINCLTTIY  698
             +RF++YRTA KLR +QK + L  + +    +A  +  L   +    + + ++   L ++Y
Sbjct  85    IRFASYRTATKLRFIQKKVSLHAVDIWNVIEAFREQGLHALEPSSELSVARLETLLCSLY  264

Query  699   DRLEQEH--NNLVNVPLCVDMCLNWLLNVYDT-GRTGRIRVLSFKTGIISLCKAHLEDKY  755
               L +        +V +C  + LNWLL  Y T    G+IRV S K  + +LC   L DK 
Sbjct  265   HSLNKRAPPTQQAHVDVCSSLLLNWLLAAYATVDNVGKIRVFSIKVALATLCAGKLMDKL  444

Query  756   RYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPE  815
             RY+F Q++ S G   Q R    L + + +P  + E  +F   N   S+ +     N K  
Sbjct  445   RYIFSQISDSNGLLIQWRFNEYLQEVLALPAAVYESPTF---NYTDSLANSIFNPNVK--  609

Query  816   IEAALFLDWMRLEPQ--SMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFN  873
             I    FLD +  +P    +VWLP+LHR+A  E   H  +C+ C+     GFRYR  K  +
Sbjct  610   ITVNDFLDTLMSDPGPPCLVWLPLLHRIANVENVIHPTQCDACQRENFSGFRYRCQKCPH  789

Query  874   YDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKH--PR  931
             Y +CQ CF+ GRV   H + + + EY + + S    +   + L+  FR      K+  PR
Sbjct  790   YTLCQDCFWKGRVTAPHTLDHQVKEYSSFSPS----KTIGQSLRKSFRCVPDKQKNNLPR  957

Query  932   MGYLPVQTVLEGDNMETPASSPQLSHD---DTHSRIEHYASRLAEMENSNGSYLNDSISP  988
                 P +T L   ++  P  SP  SH+   D ++   H+   +  +++ + +   DS   
Sbjct  958   FPEQPEKT-LNLSHIVPP--SPIPSHNGFPDGNNFTSHFDG-MGSLDSRSTARSLDS---  1116

Query  989   NESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQ  1048
               + DDEH ++  Y   L Q++     R P++  + ++S  R + E +++ LE +NR + 
Sbjct  1117  --ARDDEHKMLARYAARLAQEARSGMGRVPSEACLGMDS-TRAQRE-LISQLEAKNREIM  1284

Query  1049  AEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILED  1108
              E  RL++Q E             +  S     +  L+ E + LR  K  LE  +  L+D
Sbjct  1285  REIARLRRQQE-------------LENSGHGTENPALMNELRALRMRKDELETHLTTLQD  1425

Query  1109  HNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLL-RVVGSQTSDSM  1167
               +QL  QL  L ++L+  Q+  +      S+P++S  RS  S P+L      +Q   S 
Sbjct  1426  SRRQLMIQLEGLMKMLKNHQSSPR------STPNSS-PRSTKSPPLLPGGAPATQPPRSA  1584

Query  1168  GEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSL  1205
              +  +  PP + S       E+     P+  GH +G +
Sbjct  1585  PQTPMSMPPTNNSIVTVSQAER-----PTHVGHPMGGI  1683


>ref|XM_001788826.1| PREDICTED: Bos taurus dystrobrevin, alpha (DTNA), mRNA
Length=6242

 Score =  186 bits (472),  Expect = 8e-44, Method: Compositional matrix adjust.
 Identities = 185/659 (28%), Positives = 295/659 (44%), Gaps = 107/659 (16%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPM--DILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D  M  ++ ++   L
Sbjct  410   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNVDPNMELNVARLEAVL  589

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + + V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  590   STIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  769

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  770   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  934

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  935   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMLGFRYRCQQ  1114

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK--  928
               NY +CQ CF+ G     H   + M EY +        +  AK L N        A   
Sbjct  1115  CHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  1273

Query  929   ---HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRL--------AEM  974
                HP     P + +     ++T    P  S +DT   HS     +  +        +E+
Sbjct  1274  EPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEV  1453

Query  975   ENS-----------NGSYLNDSISPNESIDDEHL--------------------------  997
             E S            G  +  S++  + + DEH+                          
Sbjct  1454  EQSKLLARAAPALLKGKGIKYSLNVADRLADEHVLIGLYVNMLRNNPSCMLESSNRLDEE  1633

Query  998   --LIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADLEEENRNLQAEYD  1052
               LI  Y   L  +S  SQP   RS   I  ++++ +  +  +++A+LE +NR +  E  
Sbjct  1634  HRLIARYAARLAAESTSSQPTQQRSAPDISFTIDANK--QQRQLIAELENKNREILQEIQ  1807

Query  1053  RLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQ  1112
             RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE RM  L++  ++
Sbjct  1808  RLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELEQRMSALQESRRE  1957

Query  1113  LESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDL  1172
             L  QL  L +LL+   A     G+  SSPS ++ R     PM +R   + ++ +      
Sbjct  1958  LMVQLEGLMKLLKTQGA-----GSPRSSPSHTISRPI---PMPVRSASACSTPT------  2095

Query  1173  LSPPQDTSTGLEEVMEQLNNSFPSSRGHNV-GSLFHMADDLGRAMESLVSVMTDEEGAE  1230
                PQD+ TG   V   +  +F  S   N+   L   AD +   M SLV  +  E G+E
Sbjct  2096  -PTPQDSLTG---VGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSEVGSE  2260


>gb|BT009805.1| Homo sapiens dystrobrevin, beta mRNA, complete cds
Length=1683

 Score =  186 bits (471),  Expect = 8e-44, Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 263/554 (47%), Gaps = 66/554 (11%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  76    NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  255

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  256   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  429

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  430   MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  597

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  598   -QQRKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  774

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK  928
              +  NY +CQ+CF+ G     H   + M E+          +  AK L +          
Sbjct  775   QQCHNYQLCQNCFWRGHAGGPHSNQHQMKEH-------SSWKSPAKKLSHAISKS-----  918

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSI-S  987
                +G +P +        E P     L+H             L  M ++  S+++  + +
Sbjct  919   ---LGCVPTREPPHPVFPEQPEKPLDLAHIVP-------PRPLTNMNDTMVSHMSSGVPT  1068

Query  988   PNESI-------DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADL  1040
             P +S+       D+EH LI  Y   L  ++  +  R P  +  + ++ +  +  +++A+L
Sbjct  1069  PTKSVLDSPSRLDEEHRLIARYAARLAAEAG-NVTRPPTDLSFNFDANK--QQRQLIAEL  1239

Query  1041  EEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLE  1100
             E +NR +  E  RL+ +HE              PT  ++ ++  L+AE +LLRQ K  LE
Sbjct  1240  ENKNREILQEIQRLRLEHEQAS----------QPTPEKAQQNPTLLAELRLLRQRKDELE  1389

Query  1101  ARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVG  1160
              RM  L++  ++L  QL  L +LL     +A+  G+  +SP+    R     PM +R   
Sbjct  1390  QRMSALQESRRELMVQLEELMKLL-----KAQATGSPHTSPTHGGGR---PMPMPVRSTS  1545

Query  1161  SQTSDSMGEEDLLS  1174
             + ++ +   +D LS
Sbjct  1546  AGSTPTHCPQDSLS  1587


>gb|AY889125.1| Synthetic construct Homo sapiens clone FLH109815.01X dystrobrevin 
beta (DTNB) mRNA, complete cds
Length=1683

 Score =  186 bits (471),  Expect = 8e-44, Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 263/554 (47%), Gaps = 66/554 (11%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  76    NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  255

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  256   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  429

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  430   MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  597

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  598   -QQRKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  774

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK  928
              +  NY +CQ+CF+ G     H   + M E+          +  AK L +          
Sbjct  775   QQCHNYQLCQNCFWRGHAGGPHSNQHQMKEH-------SSWKSPAKKLSHAISKS-----  918

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSI-S  987
                +G +P +        E P     L+H             L  M ++  S+++  + +
Sbjct  919   ---LGCVPTREPPHPVFPEQPEKPLDLAHIVP-------PRPLTNMNDTMVSHMSSGVPT  1068

Query  988   PNESI-------DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADL  1040
             P +S+       D+EH LI  Y   L  ++  +  R P  +  + ++ +  +  +++A+L
Sbjct  1069  PTKSVLDSPSRLDEEHRLIARYAARLAAEAG-NVTRPPTDLSFNFDANK--QQRQLIAEL  1239

Query  1041  EEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLE  1100
             E +NR +  E  RL+ +HE              PT  ++ ++  L+AE +LLRQ K  LE
Sbjct  1240  ENKNREILQEIQRLRLEHEQAS----------QPTPEKAQQNPTLLAELRLLRQRKDELE  1389

Query  1101  ARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVG  1160
              RM  L++  ++L  QL  L +LL     +A+  G+  +SP+    R     PM +R   
Sbjct  1390  QRMSALQESRRELMVQLEELMKLL-----KAQATGSPHTSPTHGGGR---PMPMPVRSTS  1545

Query  1161  SQTSDSMGEEDLLS  1174
             + ++ +   +D LS
Sbjct  1546  AGSTPTHCPQDSLS  1587


>gb|AY889124.1| Synthetic construct Homo sapiens clone FLH109814.01X dystrobrevin 
beta (DTNB) mRNA, complete cds
Length=1683

 Score =  186 bits (471),  Expect = 8e-44, Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 263/554 (47%), Gaps = 66/554 (11%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  76    NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  255

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  256   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  429

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  430   MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  597

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  598   -QQRKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  774

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK  928
              +  NY +CQ+CF+ G     H   + M E+          +  AK L +          
Sbjct  775   QQCHNYQLCQNCFWRGHAGGPHSNQHQMKEH-------SSWKSPAKKLSHAISKS-----  918

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSI-S  987
                +G +P +        E P     L+H             L  M ++  S+++  + +
Sbjct  919   ---LGCVPTREPPHPVFPEQPEKPLDLAHIVP-------PRPLTNMNDTMVSHMSSGVPT  1068

Query  988   PNESI-------DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADL  1040
             P +S+       D+EH LI  Y   L  ++  +  R P  +  + ++ +  +  +++A+L
Sbjct  1069  PTKSVLDSPSRLDEEHRLIARYAARLAAEAG-NVTRPPTDLSFNFDANK--QQRQLIAEL  1239

Query  1041  EEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLE  1100
             E +NR +  E  RL+ +HE              PT  ++ ++  L+AE +LLRQ K  LE
Sbjct  1240  ENKNREILQEIQRLRLEHEQAS----------QPTPEKAQQNPTLLAELRLLRQRKDELE  1389

Query  1101  ARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVG  1160
              RM  L++  ++L  QL  L +LL     +A+  G+  +SP+    R     PM +R   
Sbjct  1390  QRMSALQESRRELMVQLEELMKLL-----KAQATGSPHTSPTHGGGR---PMPMPVRSTS  1545

Query  1161  SQTSDSMGEEDLLS  1174
             + ++ +   +D LS
Sbjct  1546  AGSTPTHCPQDSLS  1587


>gb|AY889123.1| Synthetic construct Homo sapiens clone FLH109811.01X dystrobrevin 
beta (DTNB) mRNA, complete cds
Length=1683

 Score =  186 bits (471),  Expect = 8e-44, Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 263/554 (47%), Gaps = 66/554 (11%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  76    NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  255

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  256   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  429

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  430   MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  597

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  598   -QQRKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  774

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK  928
              +  NY +CQ+CF+ G     H   + M E+          +  AK L +          
Sbjct  775   QQCHNYQLCQNCFWRGHAGGPHSNQHQMKEH-------SSWKSPAKKLSHAISKS-----  918

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSI-S  987
                +G +P +        E P     L+H             L  M ++  S+++  + +
Sbjct  919   ---LGCVPTREPPHPVFPEQPEKPLDLAHIVP-------PRPLTNMNDTMVSHMSSGVPT  1068

Query  988   PNESI-------DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADL  1040
             P +S+       D+EH LI  Y   L  ++  +  R P  +  + ++ +  +  +++A+L
Sbjct  1069  PTKSVLDSPSRLDEEHRLIARYAARLAAEAG-NVTRPPTDLSFNFDANK--QQRQLIAEL  1239

Query  1041  EEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLE  1100
             E +NR +  E  RL+ +HE              PT  ++ ++  L+AE +LLRQ K  LE
Sbjct  1240  ENKNREILQEIQRLRLEHEQAS----------QPTPEKAQQNPTLLAELRLLRQRKDELE  1389

Query  1101  ARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVG  1160
              RM  L++  ++L  QL  L +LL     +A+  G+  +SP+    R     PM +R   
Sbjct  1390  QRMSALQESRRELMVQLEELMKLL-----KAQATGSPHTSPTHGGGR---PMPMPVRSTS  1545

Query  1161  SQTSDSMGEEDLLS  1174
             + ++ +   +D LS
Sbjct  1546  AGSTPTHCPQDSLS  1587


>ref|NM_183361.1| Homo sapiens dystrobrevin, beta (DTNB), transcript variant 5, 
mRNA
Length=2315

 Score =  186 bits (471),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 263/554 (47%), Gaps = 66/554 (11%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  326   NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  505

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  506   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  679

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  680   MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  847

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  848   -QQRKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  1024

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK  928
              +  NY +CQ+CF+ G     H   + M E+          +  AK L +          
Sbjct  1025  QQCHNYQLCQNCFWRGHAGGPHSNQHQMKEH-------SSWKSPAKKLSHAISKS-----  1168

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSI-S  987
                +G +P +        E P     L+H             L  M ++  S+++  + +
Sbjct  1169  ---LGCVPTREPPHPVFPEQPEKPLDLAHIVP-------PRPLTNMNDTMVSHMSSGVPT  1318

Query  988   PNESI-------DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADL  1040
             P +S+       D+EH LI  Y   L  ++  +  R P  +  + ++ +  +  +++A+L
Sbjct  1319  PTKSVLDSPSRLDEEHRLIARYAARLAAEAG-NVTRPPTDLSFNFDANK--QQRQLIAEL  1489

Query  1041  EEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLE  1100
             E +NR +  E  RL+ +HE              PT  ++ ++  L+AE +LLRQ K  LE
Sbjct  1490  ENKNREILQEIQRLRLEHEQAS----------QPTPEKAQQNPTLLAELRLLRQRKDELE  1639

Query  1101  ARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVG  1160
              RM  L++  ++L  QL  L +LL     +A+  G+  +SP+    R     PM +R   
Sbjct  1640  QRMSALQESRRELMVQLEELMKLL-----KAQATGSPHTSPTHGGGR---PMPMPVRSTS  1795

Query  1161  SQTSDSMGEEDLLS  1174
             + ++ +   +D LS
Sbjct  1796  AGSTPTHCPQDSLS  1837


>gb|BC016655.1| Homo sapiens dystrobrevin, beta, mRNA (cDNA clone MGC:17163 IMAGE:3868207), 
complete cds
Length=2221

 Score =  186 bits (471),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 263/554 (47%), Gaps = 66/554 (11%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  232   NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  411

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  412   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  585

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  586   MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  753

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  754   -QQRKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  930

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK  928
              +  NY +CQ+CF+ G     H   + M E+          +  AK L +          
Sbjct  931   QQCHNYQLCQNCFWRGHAGGPHSNQHQMKEH-------SSWKSPAKKLSHAISKS-----  1074

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSI-S  987
                +G +P +        E P     L+H             L  M ++  S+++  + +
Sbjct  1075  ---LGCVPTREPPHPVFPEQPEKPLDLAHIVP-------PRPLTNMNDTMVSHMSSGVPT  1224

Query  988   PNESI-------DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADL  1040
             P +S+       D+EH LI  Y   L  ++  +  R P  +  + ++ +  +  +++A+L
Sbjct  1225  PTKSVLDSPSRLDEEHRLIARYAARLAAEAG-NVTRPPTDLSFNFDANK--QQRQLIAEL  1395

Query  1041  EEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLE  1100
             E +NR +  E  RL+ +HE              PT  ++ ++  L+AE +LLRQ K  LE
Sbjct  1396  ENKNREILQEIQRLRLEHEQAS----------QPTPEKAQQNPTLLAELRLLRQRKDELE  1545

Query  1101  ARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVG  1160
              RM  L++  ++L  QL  L +LL     +A+  G+  +SP+    R     PM +R   
Sbjct  1546  QRMSALQESRRELMVQLEELMKLL-----KAQATGSPHTSPTHGGGR---PMPMPVRSTS  1701

Query  1161  SQTSDSMGEEDLLS  1174
             + ++ +   +D LS
Sbjct  1702  AGSTPTHCPQDSLS  1743


>ref|XM_547610.2| PREDICTED: Canis familiaris similar to dystrobrevin alpha isoform 
1 (LOC490488), mRNA
Length=2571

 Score =  185 bits (469),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 183/659 (27%), Positives = 294/659 (44%), Gaps = 107/659 (16%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMD--ILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D  ++  + ++   L
Sbjct  253   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELSVARLEAVL  432

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + + V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  433   STIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  612

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  613   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  777

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  778   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  957

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK--  928
               NY +CQ CF+ G     H   + M EY +        +  AK L N        A   
Sbjct  958   CHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  1116

Query  929   ---HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT------HSRIEHYASRLAEMENS--  977
                HP     P + +     ++T    P  S +DT       S    + +R +  ++S  
Sbjct  1117  EPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEV  1296

Query  978   --------------NGSYLNDSISPNESIDDEHLL-------------------------  998
                            G  +  S++  + + DEH+L                         
Sbjct  1297  EQNKLLARAAPAFLKGKGIQYSLNVADRLADEHVLIGLYVNRLRNNPSCMLESSNRLDEE  1476

Query  999   ---IQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADLEEENRNLQAEYD  1052
                I  Y   L  +S  SQP   RS   I  ++++ +  +  +++A+LE +NR +  E  
Sbjct  1477  HRLIARYAARLAAESTSSQPTQQRSAPDISFTIDANK--QQRQLIAELENKNREILQEIQ  1650

Query  1053  RLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQ  1112
             RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE RM  L++  ++
Sbjct  1651  RLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELEQRMSALQESRRE  1800

Query  1113  LESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDL  1172
             L  QL  L +LL+   A     G+  SSPS ++ R     PM +R   + +S +      
Sbjct  1801  LMVQLEGLMKLLKTQGA-----GSPRSSPSHTISRPI---PMPVRSASACSSPAHT----  1944

Query  1173  LSPPQDTSTGLEEVMEQLNNSFPSSRGHNV-GSLFHMADDLGRAMESLVSVMTDEEGAE  1230
                PQD+ TG   V   +  +F  S   N+   L   AD +   M SLV  +  E G+E
Sbjct  1945  ---PQDSLTG---VGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSEVGSE  2103


>gb|U26744.1|HSU26744 Human dystrobrevin-gamma mRNA, complete cds
Length=2419

 Score =  184 bits (468),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 153/516 (29%), Positives = 253/516 (49%), Gaps = 53/516 (10%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQND--QPMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  134   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTELNVSRLEAVL  313

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  314   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  493

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P ++ E  SFG +  E S RSCF   + 
Sbjct  494   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTEVLEGPSFGYT--EQSARSCF---SQ  658

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  659   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  838

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK--  928
               NY +CQ CF+ G     H   + M EY +        +  AK L N        A   
Sbjct  839   CHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  997

Query  929   ---HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYL  982
                HP     P + +     ++T    P  S +DT   HS           + +S   ++
Sbjct  998   EPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHS-----------VPSSGSPFI  1144

Query  983   NDS-ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILA  1038
               S +  +  +D+EH LI  Y   L  +S  SQP   RS   I  ++++ ++    +++A
Sbjct  1145  TRSMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANKQQ--RQLIA  1318

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGR  1098
             +LE +NR +  E  RL+ +HE     P P   +  PT         L+AE +LLRQ K  
Sbjct  1319  ELENKNREILQEIQRLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDE  1468

Query  1099  LEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVN  1134
             LE RM  L++  ++L  QL  L +LL++ + +  V+
Sbjct  1469  LEQRMSALQESRRELMVQLEGLMKLLKEEELKQGVS  1576


>emb|X95227.1| M.musculus mRNA for dystrobrevin (clone m32)
Length=1883

 Score =  184 bits (467),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 153/516 (29%), Positives = 252/516 (48%), Gaps = 53/516 (10%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  251   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  430

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  431   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  610

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  611   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  775

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  776   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPLECSYCHSESMMGFRYRCQQ  955

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK--  928
               NY +CQ CF+ G     H   + M EY +        +  AK L N        A   
Sbjct  956   CHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  1114

Query  929   ---HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYL  982
                HP     P + +     ++T    P  S +DT   HS           + +S   ++
Sbjct  1115  EPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHS-----------VPSSGSPFI  1261

Query  983   NDS-ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILA  1038
               S +  +  +D+EH LI  Y   L  +S  SQP   RS   I  ++++ +  +  +++A
Sbjct  1262  TRSMLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDISFTIDANK--QQRQLIA  1435

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGR  1098
             +LE +NR +  E  RL+ +HE     P P   +  PT         L+AE +LLRQ K  
Sbjct  1436  ELENKNREILQEIQRLRVEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDE  1585

Query  1099  LEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVN  1134
             LE RM  L++  ++L  QL  L +LL++ + +  V+
Sbjct  1586  LEQRMSALQESRRELMVQLEGLMKLLKEEELKQGVS  1693


>ref|NM_032979.4| Homo sapiens dystrobrevin, alpha (DTNA), transcript variant 5, 
mRNA
Length=4553

 Score =  184 bits (467),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 153/516 (29%), Positives = 252/516 (48%), Gaps = 53/516 (10%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQND--QPMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  427   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTELNVSRLEAVL  606

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  607   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  786

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  787   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  951

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  952   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  1131

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK--  928
               NY +CQ CF+ G     H   + M EY +        +  AK L N        A   
Sbjct  1132  CHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  1290

Query  929   ---HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYL  982
                HP     P + +     ++T    P  S +DT   HS           + +S   ++
Sbjct  1291  EPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHS-----------VPSSGSPFI  1437

Query  983   NDS-ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILA  1038
               S +  +  +D+EH LI  Y   L  +S  SQP   RS   I  ++++ ++    +++A
Sbjct  1438  TRSMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANKQQ--RQLIA  1611

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGR  1098
             +LE +NR +  E  RL+ +HE     P P   +  PT         L+AE +LLRQ K  
Sbjct  1612  ELENKNREILQEIQRLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDE  1761

Query  1099  LEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVN  1134
             LE RM  L++  ++L  QL  L +LL++ + +  V+
Sbjct  1762  LEQRMSALQESRRELMVQLEGLMKLLKEEELKQGVS  1869


>dbj|AK019477.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched 
library, clone:4631433M03 product:dystrobrevin alpha, full 
insert sequence
Length=3861

 Score =  184 bits (467),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 180/658 (27%), Positives = 294/658 (44%), Gaps = 101/658 (15%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  563   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  742

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  743   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  922

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  923   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  1087

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    I+GFRYR  +
Sbjct  1088  QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESIMGFRYRCQQ  1267

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFA--K  928
               NY +CQ CF+ G     H   + M EY +        +  AK L N        A  +
Sbjct  1268  CHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  1426

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT------HSRIEHYASRLAEMENS-----  977
              P     P Q     +        P  S +DT       S    + +R +  ++S     
Sbjct  1427  EPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEVEQN  1606

Query  978   -----------NGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPL--------------  1012
                         G  +  S++  + + DEH+LI  Y   L  D P               
Sbjct  1607  KMLARAAPAFLKGRGIQYSLNVADRLADEHVLIGLYVNMLRNDPPCMLESSNRLDEEHRL  1786

Query  1013  --------------SQP---RSPAQILISLESEERGELERILADLEEENRNLQAEYDRLK  1055
                           SQP   RS   I  ++++ +  +  +++A+LE +NR +  E  RL+
Sbjct  1787  IARYAARLAAESSSSQPTQQRSAPDISFTIDANK--QQRQLIAELENKNREILQEIQRLR  1960

Query  1056  QQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLES  1115
              +HE              PT  ++ ++  L+AE +LLRQ K  LE RM  L++  ++L  
Sbjct  1961  VEHEQAS----------QPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMV  2110

Query  1116  QLHRLRQLLEQPQAEAKVNGTTV--SSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLL  1173
             QL  L +LL++ + +    G +   SSPS ++ R     PM +R   +  + +       
Sbjct  2111  QLEGLMKLLKEEELKQGTQGASSPRSSPSHTISRPI---PMPIRSASACPTPTHT-----  2266

Query  1174  SPPQDTSTGLEEVMEQLNNSFPSSRGHNVGS-LFHMADDLGRAMESLVSVMTDEEGAE  1230
               PQD+ TG   V   +  +F  S   N+ S L   AD +   M SLV  +  E  +E
Sbjct  2267  --PQDSLTG---VGGDVQEAFAQSSRRNLRSDLLVAADSITNTMSSLVKELNSEVASE  2425


>gb|DQ516346.1| Danio rerio gamma-dystrobrevin (GDTN) mRNA, complete cds
Length=2570

 Score =  184 bits (467),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 170/619 (27%), Positives = 280/619 (45%), Gaps = 64/619 (10%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCL-DLLSLSAACDALDQHNLKQND--QPMDILQIINC  693
             + + +R S YRTA KLR +QK   L  L+ +    +A   + L   D    + + ++   
Sbjct  103   NYDTIRLSTYRTACKLRFVQKKCNLMHLVDVWNMIEAFRDNGLNTLDVCTEISVARLETI  282

Query  694   LTTIYDRLEQE--HNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHL  751
             LT IY +L +     + ++V     + LN++   +DT   GR+ V S K  +  LC   L
Sbjct  283   LTCIYQQLNKRLPTTHQISVQHNTSLLLNFMATAHDTDAQGRLTVFSVKMMLSVLCGGKL  462

Query  752   EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN  811
              DK RY+F Q++ S G  +  +    L +++++P  + E  SFG   ++   RSCF    
Sbjct  463   VDKLRYIFSQISDSHGAMEMSKFDHFLREALKLPAAVFEGPSFG--YLDHLARSCFP---  627

Query  812   NKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  869
              + ++   +FLD +  +P  Q ++WLP++HR+   E   H   C+ C+   + GFRYR  
Sbjct  628   QQKKVMLNMFLDALMSDPPPQCLIWLPLVHRMGNVENVHHPVSCSFCRSDGMTGFRYRCQ  807

Query  870   KHFNYDICQSCFFSGRVAKGHKMHYPMVEYC---TPTTS-GEDVRDFAKVLKNKFRTKRY  925
             + FNY +CQ+CF+ G  +  H  H+ M E+    +P    G  +      + ++  +   
Sbjct  808   QCFNYQLCQNCFWRGHASGNHSNHHEMKEHSSWKSPVKKLGRAISKSLGCVPSREPSHPI  987

Query  926   FAKHPR-----MGYLPVQTVLEGDNMETPASSPQLSHDDTHSR---IEHYASRLAEMENS  977
             + ++P         +P + +    NM  PA  P LS   + ++       A R+ E    
Sbjct  988   YPEYPEKPLNLSNIVPPRPI---GNMNEPA--PPLSTGSSPTKRLPTLAAAQRMNEEHAL  1152

Query  978   NGSYLNDSISPNESI------DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERG  1031
               +Y+N   S   ++      D+EH LI  Y   L  D P    R PA        ++R 
Sbjct  1153  IAAYVNKLQSSPRALDSPVRSDEEHKLIARYASRLATD-PGHTAR-PADFSYDTNKQQR-  1323

Query  1032  ELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKL  1091
                 ++  LE +NR +  E  RL+ +HE +   P P   +  PT         L+AE + 
Sbjct  1324  ---ELIMQLENKNREILQEIQRLRVEHE-QACQPTPERVQQNPT---------LLAELRQ  1464

Query  1092  LRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSS  1151
             LRQ K  LE RM  L++  ++L  QL  L +LL     +A+  G   SSPS +  R   S
Sbjct  1465  LRQRKDELEQRMSSLQESRRELMVQLEGLMKLL-----KAQAAG---SSPSHASPR---S  1611

Query  1152  QPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADD  1211
              PM +R   S  + +         PQD+  G+   +++  +  P     N   L   AD 
Sbjct  1612  MPMPIRSPSSGPAPTYTGHTPTHGPQDSLAGVGGDVQEAFSQGPRRNLRN--DLLVAADS  1785

Query  1212  LGRAMESLVSVMTDEEGAE  1230
             +   M SLV  +   E  +
Sbjct  1786  ITNTMSSLVKELNSAEDGD  1842


>ref|XM_512087.2| PREDICTED: Pan troglodytes dystrobrevin alpha (DTNA), mRNA
Length=4928

 Score =  184 bits (466),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 183/660 (27%), Positives = 297/660 (45%), Gaps = 109/660 (16%)
 Frame = +3

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQH---NLKQNDQPMDILQIINC  693
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++   NL  N + +++ ++   
Sbjct  291   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTE-LNVSRLEAV  467

Query  694   LTTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHL  751
             L+TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   +
Sbjct  468   LSTIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKI  647

Query  752   EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN  811
              DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   +
Sbjct  648   MDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---S  812

Query  812   NKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  869
              + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  
Sbjct  813   QQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQ  992

Query  870   KHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK-  928
             +  NY +CQ CF+ G     H   + M EY +        +  AK L N        A  
Sbjct  993   QCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASS  1151

Query  929   ----HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT------HSRIEHYASRLAEMENS-  977
                 HP     P + +     ++T    P  S +DT       S    + +R +  ++S 
Sbjct  1152  REPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSE  1331

Query  978   ---------------NGSYLNDSISPNESIDDEHLL------------------------  998
                             G  +  S++  + + DEH+L                        
Sbjct  1332  VEQNKLLARAAPAFLKGKGIQYSLNVADRLADEHVLIGLYVNMLRNNPSCMLESSNRLDE  1511

Query  999   ----IQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADLEEENRNLQAEY  1051
                 I  Y   L  +S  SQP   RS   I  ++++ +  +  +++A+LE +NR +  E 
Sbjct  1512  EHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANK--QQRQLIAELENKNREILQEI  1685

Query  1052  DRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNK  1111
              RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE RM  L++  +
Sbjct  1686  QRLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELEQRMSALQESRR  1835

Query  1112  QLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEED  1171
             +L  QL  L +LL+   A     G+  SSPS ++ R     PM +R   + ++ +     
Sbjct  1836  ELMVQLEGLMKLLKTQGA-----GSPRSSPSHTISRPI---PMPIRSASACSTPTHT---  1982

Query  1172  LLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV-GSLFHMADDLGRAMESLVSVMTDEEGAE  1230
                 PQD+ TG   V   +  +F  S   N+   L   AD +   M SLV  +  E G+E
Sbjct  1983  ----PQDSLTG---VGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSEVGSE  2141


>ref|XM_001495981.1| PREDICTED: Equus caballus dystrobrevin, alpha, transcript variant 
2 (DTNA), mRNA
Length=2232

 Score =  184 bits (466),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 182/659 (27%), Positives = 294/659 (44%), Gaps = 107/659 (16%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  76    DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  255

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + + V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  256   STIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  435

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  436   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  600

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  601   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  780

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK--  928
               NY +CQ CF+ G     H   + M EY +        +  AK L N        A   
Sbjct  781   CHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  939

Query  929   ---HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT------HSRIEHYASRLAEMENS--  977
                HP     P + +     ++T    P  S +DT       S    + +R +  ++S  
Sbjct  940   EPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEV  1119

Query  978   --------------NGSYLNDSISPNESIDDEHLL-------------------------  998
                            G  +  S++  + + DEH+L                         
Sbjct  1120  EQNKLLARAAPAFLKGKGIQYSLNVADRLADEHVLIGLYVNMLRNNPSCMLESSNRLDEE  1299

Query  999   ---IQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADLEEENRNLQAEYD  1052
                I  Y   L  +S  SQP   RS   I  ++++ +  +  +++A+LE +NR +  E  
Sbjct  1300  HRLIARYAARLAAESTSSQPTQQRSAPDISFTIDANK--QQRQLIAELENKNREILQEIQ  1473

Query  1053  RLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQ  1112
             RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE RM  L++  ++
Sbjct  1474  RLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELEQRMSALQESRRE  1623

Query  1113  LESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDL  1172
             L  QL  L +LL+   A     G+  SSPS ++ R     PM +R   + ++ +      
Sbjct  1624  LMVQLEGLMKLLKTQGA-----GSPRSSPSHTISRPI---PMPVRSASACSTPTHT----  1767

Query  1173  LSPPQDTSTGLEEVMEQLNNSFPSSRGHNV-GSLFHMADDLGRAMESLVSVMTDEEGAE  1230
                PQD+ TG   V   +  +F  S   N+   L   AD +   M SLV  +  E G+E
Sbjct  1768  ---PQDSLTG---VGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSEAGSE  1926


>ref|XM_001369068.1| PREDICTED: Monodelphis domestica similar to dystrobrevin, alpha,, 
transcript variant 5 (LOC100023710), mRNA
Length=1704

 Score =  184 bits (466),  Expect = 4e-43, Method: Compositional matrix adjust.
 Identities = 164/562 (29%), Positives = 266/562 (47%), Gaps = 91/562 (16%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  76    DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  255

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  256   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  435

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R  L L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  436   DKLRYIFSMISDSSGVMVYGRYDLFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  600

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  601   QKKVTLNAFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  780

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK--  928
               NY +CQ CF+ G  +  H   + M EY +        +  AK L N        A   
Sbjct  781   CHNYQLCQDCFWRGHASGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  939

Query  929   ---HPRMG-----------YLPVQTVLEGDNM----ETPAS-SPQLSHDDTHSRIE----  965
                HP               +P + V   ++       P+S SP ++   +H   E    
Sbjct  940   EPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSSSHKNTEVEQS  1119

Query  966   ----------------HY----ASRLAE----------MENSNGSYLNDSISPNESIDDE  995
                             HY    A RLA+          M  SN S + D  SPN  +D+E
Sbjct  1120  KLLARAAPIFLKGKGLHYSLDVADRLADEHVLIGLYVNMLQSNPSRMLD--SPNR-LDEE  1290

Query  996   HLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADLEEENRNLQAEYD  1052
             H LI  Y   L  ++  +QP   R P+ I  ++++ +  +  +++A+LE +NR +  E  
Sbjct  1291  HRLIARYAARLAAETSSTQPSQQRGPSDISFTIDANK--QQRQLIAELENKNREILQEIQ  1464

Query  1053  RLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQ  1112
             RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE RM  L++  ++
Sbjct  1465  RLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELEQRMSALQESRRE  1614

Query  1113  LESQLHRLRQLLEQPQAEAKVN  1134
             L  QL  L +LL++ + +  V+
Sbjct  1615  LMVQLEGLMKLLKEEELKQGVS  1680


>ref|NM_001390.4| Homo sapiens dystrobrevin, alpha (DTNA), transcript variant 1, 
mRNA
Length=6358

 Score =  184 bits (466),  Expect = 4e-43, Method: Compositional matrix adjust.
 Identities = 183/660 (27%), Positives = 297/660 (45%), Gaps = 109/660 (16%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQH---NLKQNDQPMDILQIINC  693
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++   NL  N + +++ ++   
Sbjct  77    DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTE-LNVSRLEAV  253

Query  694   LTTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHL  751
             L+TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   +
Sbjct  254   LSTIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKI  433

Query  752   EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN  811
              DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   +
Sbjct  434   MDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---S  598

Query  812   NKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  869
              + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  
Sbjct  599   QQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQ  778

Query  870   KHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK-  928
             +  NY +CQ CF+ G     H   + M EY +        +  AK L N        A  
Sbjct  779   QCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASS  937

Query  929   ----HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT------HSRIEHYASRLAEMENS-  977
                 HP     P + +     ++T    P  S +DT       S    + +R +  ++S 
Sbjct  938   REPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSE  1117

Query  978   ---------------NGSYLNDSISPNESIDDEHLL------------------------  998
                             G  +  S++  + + DEH+L                        
Sbjct  1118  VEQNKLLARAAPAFLKGKGIQYSLNVADRLADEHVLIGLYVNMLRNNPSCMLESSNRLDE  1297

Query  999   ----IQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADLEEENRNLQAEY  1051
                 I  Y   L  +S  SQP   RS   I  ++++ +  +  +++A+LE +NR +  E 
Sbjct  1298  EHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANK--QQRQLIAELENKNREILQEI  1471

Query  1052  DRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNK  1111
              RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE RM  L++  +
Sbjct  1472  QRLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELEQRMSALQESRR  1621

Query  1112  QLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEED  1171
             +L  QL  L +LL+   A     G+  SSPS ++ R     PM +R   + ++ +     
Sbjct  1622  ELMVQLEGLMKLLKTQGA-----GSPRSSPSHTISRPI---PMPIRSASACSTPTHT---  1768

Query  1172  LLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV-GSLFHMADDLGRAMESLVSVMTDEEGAE  1230
                 PQD+ TG   V   +  +F  S   N+   L   AD +   M SLV  +  E G+E
Sbjct  1769  ----PQDSLTG---VGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSEVGSE  1927


>ref|XM_001054112.1| PREDICTED: Rattus norvegicus similar to dystrobrevin alpha isoform 
1 (predicted), transcript variant 2 (RGD1561985_predicted), 
mRNA
Length=2039

 Score =  183 bits (464),  Expect = 5e-43, Method: Compositional matrix adjust.
 Identities = 151/516 (29%), Positives = 252/516 (48%), Gaps = 53/516 (10%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  409   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  588

Query  695   TTIYDRLEQE--HNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +T++ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  589   STMFYQLNKRMPSTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  768

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  769   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  933

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  934   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  1113

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK--  928
               NY +CQ CF+ G     H   + M EY +        +  AK L N        A   
Sbjct  1114  CHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  1272

Query  929   ---HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYL  982
                HP     P + +     ++T    P  S +DT   HS           + +S   ++
Sbjct  1273  EPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHS-----------VPSSGSPFI  1419

Query  983   NDS-ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILA  1038
               S +  +  +D+EH LI  Y   L  +S  SQP   RS   +  ++++ +  +  +++A
Sbjct  1420  TRSMLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDVSFTIDANK--QQRQLIA  1593

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGR  1098
             +LE +NR +  E  RL+ +HE     P P   +  PT         L+AE +LLRQ K  
Sbjct  1594  ELENKNREILQEIQRLRVEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDE  1743

Query  1099  LEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVN  1134
             LE RM  L++  ++L  QL  L +LL++ + +  V+
Sbjct  1744  LEQRMSALQESRRELMVQLEGLMKLLKEEELKQGVS  1851


>ref|XM_001102769.1| PREDICTED: Macaca mulatta similar to dystrobrevin alpha isoform 
1 (LOC707887), mRNA
Length=6588

 Score =  183 bits (464),  Expect = 6e-43, Method: Compositional matrix adjust.
 Identities = 182/659 (27%), Positives = 295/659 (44%), Gaps = 107/659 (16%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  326   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVSRLEAVL  505

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  506   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  685

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  686   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  850

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  851   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  1030

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK--  928
               NY +CQ CF+ G     H   + M EY +        +  AK L N        A   
Sbjct  1031  CHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  1189

Query  929   ---HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT------HSRIEHYASRLAEMENS--  977
                HP     P + +     ++T    P  S +DT       S    + +R +  ++S  
Sbjct  1190  EPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEV  1369

Query  978   --------------NGSYLNDSISPNESIDDEHLL-------------------------  998
                            G  +  S++  + + DEH+L                         
Sbjct  1370  EQNKLLARAAPAFLKGKGIQYSLNVADRLADEHVLIGLYVNMLRNNPSCMLESSNRLDEE  1549

Query  999   ---IQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADLEEENRNLQAEYD  1052
                I  Y   L  +S  SQP   RS   I  ++++ +  +  +++A+LE +NR +  E  
Sbjct  1550  HRLIARYAARLAAESSSSQPTQQRSAPDISFTIDANK--QQRQLIAELENKNREILQEIQ  1723

Query  1053  RLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQ  1112
             RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE RM  L++  ++
Sbjct  1724  RLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELEQRMSALQESRRE  1873

Query  1113  LESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDL  1172
             L  QL  L +LL+   A     G+  SSPS ++ R     PM +R   + ++ +      
Sbjct  1874  LMVQLEGLMKLLKTQGA-----GSPRSSPSHTISRPI---PMPVRSASACSTPTHT----  2017

Query  1173  LSPPQDTSTGLEEVMEQLNNSFPSSRGHNV-GSLFHMADDLGRAMESLVSVMTDEEGAE  1230
                PQD+ TG   V   +  +F  S   N+   L   AD +   M SLV  +  E G+E
Sbjct  2018  ---PQDSLTG---VGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSEVGSE  2176


>ref|XM_001369046.1| PREDICTED: Monodelphis domestica similar to dystrobrevin, alpha,, 
transcript variant 4 (LOC100023710), mRNA
Length=1713

 Score =  182 bits (463),  Expect = 8e-43, Method: Compositional matrix adjust.
 Identities = 164/565 (29%), Positives = 266/565 (47%), Gaps = 94/565 (16%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  76    DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  255

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  256   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  435

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R  L L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  436   DKLRYIFSMISDSSGVMVYGRYDLFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  600

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  601   QKKVTLNAFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  780

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK--  928
               NY +CQ CF+ G  +  H   + M EY +        +  AK L N        A   
Sbjct  781   CHNYQLCQDCFWRGHASGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  939

Query  929   ---HPRMGYLPVQTVLEGDNMET------------------PAS-SPQLSHDDTHSRIE-  965
                HP     P + +     ++T                  P+S SP ++   +H   E 
Sbjct  940   EPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHSVPSSGSPFITRSSSHKNTEV  1119

Query  966   -------------------HY----ASRLAE----------MENSNGSYLNDSISPNESI  992
                                HY    A RLA+          M  SN S + D  SPN  +
Sbjct  1120  EQSKLLARAAPIFLKGKGLHYSLDVADRLADEHVLIGLYVNMLQSNPSRMLD--SPNR-L  1290

Query  993   DDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADLEEENRNLQA  1049
             D+EH LI  Y   L  ++  +QP   R P+ I  ++++ +  +  +++A+LE +NR +  
Sbjct  1291  DEEHRLIARYAARLAAETSSTQPSQQRGPSDISFTIDANK--QQRQLIAELENKNREILQ  1464

Query  1050  EYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDH  1109
             E  RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE RM  L++ 
Sbjct  1465  EIQRLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELEQRMSALQES  1614

Query  1110  NKQLESQLHRLRQLLEQPQAEAKVN  1134
              ++L  QL  L +LL++ + +  V+
Sbjct  1615  RRELMVQLEGLMKLLKEEELKQGVS  1689


>emb|X65468.1| R.norvegicus mRNA for apodystrophin-I
Length=384

 Score =  182 bits (463),  Expect = 8e-43, Method: Compositional matrix adjust.
 Identities = 86/86 (100%), Positives = 86/86 (100%), Gaps = 0/86 (0%)
 Frame = +1

Query  616  HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQ  675
            HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQ
Sbjct  127  HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQ  306

Query  676  HNLKQNDQPMDILQIINCLTTIYDRL  701
            HNLKQNDQPMDILQIINCLTTIYDRL
Sbjct  307  HNLKQNDQPMDILQIINCLTTIYDRL  384


>ref|XM_001054548.1| PREDICTED: Rattus norvegicus similar to dystrobrevin alpha isoform 
1 (predicted), transcript variant 7 (RGD1561985_predicted), 
mRNA
Length=3402

 Score =  182 bits (462),  Expect = 9e-43, Method: Compositional matrix adjust.
 Identities = 164/588 (27%), Positives = 271/588 (46%), Gaps = 91/588 (15%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  257   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  436

Query  695   TTIYDRLEQE--HNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +T++ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  437   STMFYQLNKRMPSTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  616

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  617   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  781

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  782   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  961

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFA--K  928
               NY +CQ CF+ G     H   + M EY +        +  AK L N        A  +
Sbjct  962   CHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  1120

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYLNDS  985
              P     P Q     +        P  S +DT   HS           + +S   ++  S
Sbjct  1121  EPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHS-----------VPSSGSPFITRS  1267

Query  986   ISPNES---------------------------IDDEHLLIQHYCQSLNQDSPLSQP---  1015
               P +S                           +D+EH LI  Y   L  +S  SQP   
Sbjct  1268  SPPKDSEVEQNKILARAAPAFLKGKGMLESSNRLDEEHRLIARYAARLAAESSSSQPTQQ  1447

Query  1016  RSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPT  1075
             RS   +  ++++ +  +  +++A+LE +NR +  E  RL+ +HE              PT
Sbjct  1448  RSAPDVSFTIDANK--QQRQLIAELENKNREILQEIQRLRVEHEQAS----------QPT  1591

Query  1076  SPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNG  1135
               ++ ++  L+AE +LLRQ K  LE RM  L++  ++L  QL  L +LL+   A     G
Sbjct  1592  PEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKTQGA-----G  1756

Query  1136  TTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGL  1183
             +  SSPS ++ R     PM +R   + ++ +         PQD+ TG+
Sbjct  1757  SPRSSPSHTISRPI---PMPIRSTSACSTPAYT-------PQDSLTGV  1870


>gb|L05649.1|HUMDYSTR15 Homo sapiens dystrophin (DMD) gene, exon 59
Length=500

 Score =  182 bits (462),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 92/101 (91%), Positives = 94/101 (93%), Gaps = 0/101 (0%)
 Frame = +1

Query  420  GLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQEL  479
            GL+  +    ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQEL
Sbjct  181  GLKPCHIANLELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQEL  360

Query  480  QEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKA  520
            QEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVK 
Sbjct  361  QEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKV  483


>dbj|AK291156.1| Homo sapiens cDNA FLJ77455 complete cds, highly similar to Homo 
sapiens dystrobrevin, alpha (DTNA), transcript variant 5, 
mRNA
Length=1869

 Score =  181 bits (459),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 150/512 (29%), Positives = 249/512 (48%), Gaps = 48/512 (9%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQH---NLKQNDQPMDILQIINC  693
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++   NL  N + +++ ++   
Sbjct  226   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTE-LNVSRLEAV  402

Query  694   LTTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHL  751
             L+TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   +
Sbjct  403   LSTIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKI  582

Query  752   EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN  811
              DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   +
Sbjct  583   MDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---S  747

Query  812   NKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  869
              + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  
Sbjct  748   QQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQ  927

Query  870   KHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKH  929
             +  NY +CQ CF+ G     H   + M EY   T+     +     L          ++ 
Sbjct  928   QCHNYQLCQDCFWRGHAGGSHSNQHQMKEY---TSWKSPAKKLTNALSKSLSCAS--SRE  1092

Query  930   PRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSRIEHYASRLAEMENSNGSYLNDS-  985
             P     P Q     +        P  S +DT   HS           + +S   ++  S 
Sbjct  1093  PLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHS-----------VPSSGSPFITRSM  1239

Query  986   ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADLEE  1042
             +  +  +D+EH LI  Y   L  +S  SQP   RS   I  ++++ +  +  +++A+LE 
Sbjct  1240  LESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANK--QQRQLIAELEN  1413

Query  1043  ENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEAR  1102
             +NR +  E  RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE R
Sbjct  1414  KNREILQEIQRLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELEQR  1563

Query  1103  MQILEDHNKQLESQLHRLRQLLEQPQAEAKVN  1134
             M  L++  ++L  QL  L +LL++ + +  V+
Sbjct  1564  MSALQESRRELMVQLEGLMKLLKEEELKQGVS  1659


>gb|AC079177.21| Homo sapiens Xp BAC RP11-147B14 (Roswell Park Cancer Institute 
Human BAC Library) complete sequence
Length=155533

 Score =  180 bits (457),  Expect = 4e-42, Method: Compositional matrix adjust.
 Identities = 91/101 (90%), Positives = 94/101 (93%), Gaps = 0/101 (0%)
 Frame = -1

Query  420     GLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQEL  479
               GL+  +    ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERL+EL
Sbjct  132907  GLKPCHIANLELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLREL  132728

Query  480     QEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKA  520
               QEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVK 
Sbjct  132727  QEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKV  132605


 Score =  111 bits (278),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%), Gaps = 0/55 (0%)
 Frame = -3

Query  336     IRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRA  390
                RSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHR 
Sbjct  151451  FRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRV  151287


 Score =  103 bits (257),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 50/52 (96%), Positives = 52/52 (100%), Gaps = 0/52 (0%)
 Frame = -2

Query  519    KALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVA  570
              +ALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQV+
Sbjct  99132  QALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVS  98977


 Score = 84.3 bits (207),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 40/43 (93%), Positives = 42/43 (97%), Gaps = 0/43 (0%)
 Frame = -2

Query  387     VHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPR  429
               + +AFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPR
Sbjct  133614  ISQAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPR  133486


 Score = 60.5 bits (145),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 27/28 (96%), Positives = 28/28 (100%), Gaps = 0/28 (0%)
 Frame = -1

Query  568   QVAVEDRVRQLHEAHRDFGPASQHFLST  595
             QVAVEDRVRQLHEAHRDFGPASQHFLS+
Sbjct  3139  QVAVEDRVRQLHEAHRDFGPASQHFLSS  3056


>ref|XM_001054600.1| PREDICTED: Rattus norvegicus similar to dystrobrevin alpha isoform 
1 (predicted), transcript variant 8 (RGD1561985_predicted), 
mRNA
Length=3504

 Score =  180 bits (456),  Expect = 5e-42, Method: Compositional matrix adjust.
 Identities = 170/611 (27%), Positives = 279/611 (45%), Gaps = 103/611 (16%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  257   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  436

Query  695   TTIYDRLEQE--HNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +T++ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  437   STMFYQLNKRMPSTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  616

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  617   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  781

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  782   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  961

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK--  928
               NY +CQ CF+ G     H   + M EY +        +  AK L N        A   
Sbjct  962   CHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  1120

Query  929   ---HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---------------------HSRI  964
                HP     P + +     ++T    P  S +DT                      S +
Sbjct  1121  EPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEV  1300

Query  965   E------------------HY----ASRLAEMENSNGSYLN-------DSISPNESIDDE  995
             E                  HY    A RLA+     G Y+N         +  +  +D+E
Sbjct  1301  EQNKILARAAPAFLKGKGIHYSLNVADRLADEHVLIGLYVNMLRNNPSCMLESSNRLDEE  1480

Query  996   HLLIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADLEEENRNLQAEYD  1052
             H LI  Y   L  +S  SQP   RS   +  ++++ +  +  +++A+LE +NR +  E  
Sbjct  1481  HRLIARYAARLAAESSSSQPTQQRSAPDVSFTIDANK--QQRQLIAELENKNREILQEIQ  1654

Query  1053  RLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQ  1112
             RL+ +HE              PT  ++ ++  L+AE +LLRQ K  LE RM  L++  ++
Sbjct  1655  RLRVEHEQAS----------QPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRE  1804

Query  1113  LESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDL  1172
             L  QL  L +LL+   A     G+  SSPS ++ R     PM +R   + ++ +      
Sbjct  1805  LMVQLEGLMKLLKTQGA-----GSPRSSPSHTISRPI---PMPIRSTSACSTPAYT----  1948

Query  1173  LSPPQDTSTGL  1183
                PQD+ TG+
Sbjct  1949  ---PQDSLTGV  1972


>ref|XM_001843534.1| Culex quinquefasciatus dystrobrevin, mRNA
Length=1989

 Score =  178 bits (451),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 153/545 (28%), Positives = 254/545 (46%), Gaps = 61/545 (11%)
 Frame = +1

Query  635   LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK----QNDQPMDILQI  690
             +   + +RF++YRTA KLR +QK+  L L+ +    +A  ++ L     QN+  +  L+ 
Sbjct  43    IQSFDTIRFASYRTACKLRYVQKSTNLHLVDIWNVIEAFRENGLNTLEPQNEVSVSRLET  222

Query  691   INCLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCK  748
             +  ++++Y  L +       VP+     + LNWLL  Y    +G+IRV S K  +  +C 
Sbjct  223   L--VSSLYHNLNKRLPPTQQVPVDSKASLLLNWLLAAYSGDNSGKIRVFSIKVALAIMCA  396

Query  749   AHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQ  808
               + DK RY+F Q++   G     +LG  L + + +P  + E  +F   + + ++ S   
Sbjct  397   GKMVDKLRYVFSQISDGAGQLIHWKLGDFLREVLALPAAVFESPTF---HYQEALESEIF  567

Query  809   FANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
                NK  +   +        P  +VWL +LHR+A  ET  H   C++C      GFRYR 
Sbjct  568   PVENKITVNDFMAALMSEPGPSCLVWLSLLHRLATVETVVHPTICSVCLRENFTGFRYRC  747

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRT--KRYF  926
              +   Y +CQ CF+ GRV+  H+  + + EY +  +  + +      L+  FR   ++  
Sbjct  748   QRCHAYQLCQDCFWQGRVSLNHQNDHEVKEYSSYKSPSKQI---GHSLRKSFRCVPEKPN  918

Query  927   AKHPRMGYLPVQTVLEGDNMETPASSPQLSHD--------------DTHSRIEHYASRLA  972
                PR    P +T L   ++  P  SP  SH+              D  S ++  A+ L+
Sbjct  919   QVLPRFPEQPEKT-LNLSHIVPP--SPLPSHNGFNDGGGAMIPGMYDRSSTLDSRATGLS  1089

Query  973   EMENSNGSYLN---DSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEE  1029
                +SNG+ +           S D+EH LI  Y   L Q+S      +P  + I L+S  
Sbjct  1090  --LDSNGTSVTRGGGGGGGANSNDEEHRLIARYAARLAQESRTPGGSAPDPVQIGLDS-S  1260

Query  1030  RGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEA  1089
             R + E I+  LE +N+ +  E  +L++Q E + +            +P+SP    L+ E 
Sbjct  1261  RAQRELIM-QLESKNKEIMREIQKLRRQQEAEQV------------APESP---ALMTEL  1392

Query  1090  KLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSD  1149
             + LRQ KG LE  +  L+D  +QL  QL  L ++L+  Q ++    T  SSP     RS 
Sbjct  1393  RALRQRKGELEGHLGALQDSRRQLMGQLEGLMRMLKNHQTQSP-RSTPNSSP-----RSG  1554

Query  1150  SSQPM  1154
              S P+
Sbjct  1555  KSPPL  1569


>ref|XM_001650730.1| Aedes aegypti dystrobrevin partial mRNA
Length=1998

 Score =  178 bits (451),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 147/536 (27%), Positives = 249/536 (46%), Gaps = 50/536 (9%)
 Frame = +1

Query  635   LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK----QNDQPMDILQI  690
             +   + +RF++YRTA KLR +QK+  L L+ +    +A  ++ L     QN+  +  L+ 
Sbjct  124   IQSFDTIRFASYRTACKLRYVQKSTNLHLVDIWNVIEAFRENGLNTLEHQNEVSVSRLET  303

Query  691   INCLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCK  748
             +  ++++Y  L +       VP+     + LNWLL  Y    +G+IRV S K  +  +C 
Sbjct  304   L--VSSLYHNLNKRLPPTQQVPVDSKASLLLNWLLAAYSGDNSGKIRVFSIKVALAIMCA  477

Query  749   AHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQ  808
               + DK RY+F Q++   G     +LG  L + + +P  + E  +F   + +  + S   
Sbjct  478   GKMVDKLRYIFSQISDGAGQLIHWKLGDFLREVLALPAAVFESPTF---HYQEGLESEIF  648

Query  809   FANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
                NK  +   + +      P  +VWL +LHR+A  E   H   C++C      GFRYR 
Sbjct  649   PVENKITVNDFMAVLMSEPGPACLVWLSLLHRLATVEAVVHPTICSVCLRENFTGFRYRC  828

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRT--KRYF  926
              +   Y +CQ CF+ GRV+  H+  + + EY +  +  + +      L+  FR   ++  
Sbjct  829   QRCHAYQLCQDCFWQGRVSLNHQNDHEVKEYSSYKSPSKQI---GHSLRKSFRCVPEKPN  999

Query  927   AKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEME--------NSN  978
                PR    P +T L   ++  P+  P  +       I     R + ++        +SN
Sbjct  1000  QVLPRFPEQPEKT-LNLSHIVPPSPLPSHNGFQDGGMIPGMYDRSSTLDSRGTGLSLDSN  1176

Query  979   GSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILA  1038
             G+ +    +   S D+EH LI  Y   L Q+S      +P  + I L+S  R + E I+ 
Sbjct  1177  GTSVTRGGA--NSNDEEHRLIARYAARLAQESRTPGSSAPDPVQIGLDS-SRAQRELIM-  1344

Query  1039  DLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGR  1098
              LE +N+ +  E  +L++Q E +         ++ P SP       L+ E + LRQ KG 
Sbjct  1345  QLESKNKEIMREIQKLRRQQEAE---------QVQPESP------ALMNELRALRQRKGE  1479

Query  1099  LEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPM  1154
             LE  +  L+D  +QL +QL  L ++L+  Q ++    T  SSP     RS  S P+
Sbjct  1480  LEGHLGALQDSRRQLMAQLEGLMRMLKNHQTQSP-RSTPNSSP-----RSGKSPPL  1629


>ref|XM_001975870.1| Drosophila erecta GG20305 (Dere\GG20305), mRNA
Length=2184

 Score =  177 bits (450),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 139/550 (25%), Positives = 243/550 (44%), Gaps = 59/550 (10%)
 Frame = +1

Query  635   LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIIN  692
             L   +++RF++YRTA KLR +QK+  L L+ +    +A  ++ L   +    + + ++  
Sbjct  43    LQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSEVSVARLET  222

Query  693   CLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
              ++++Y  L +       VP+     + LNWLL  Y +  +G+IRV S K  + ++C   
Sbjct  223   LVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAYTSDNSGKIRVFSIKVALATMCSGK  402

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             L DK RY+F Q++   G     +LG  L + + +P  + E  +F   + +  +      A
Sbjct  403   LVDKLRYIFSQISDGAGQMVAWKLGEFLREVLALPAAVYESPTF---HYKEGLEEEIFPA  573

Query  811   NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
              NK  +   +        P  +VWLP++HR+A  ET  H   C++C +    GFRYR  +
Sbjct  574   ENKVTVNDFMATLMSEPGPSCLVWLPLVHRLATVETIVHPTVCSVCHKENFTGFRYRCQR  753

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDV-----RDFAKVLKNKFRTKRY  925
                Y +CQ CF+ G+ +  H+  + + EY +  +  + +     + F  V +   +    
Sbjct  754   CHAYQLCQECFWHGKTSLNHQNDHEVKEYSSYKSPSKQIGHSLRKSFRCVPEKTVQVLPR  933

Query  926   FAKHPRM-----------------GYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYA  968
             F   P                   G+     ++ G + + P    Q    D  S ++  A
Sbjct  934   FPDQPEKTLNLSHIVPPSPLPSHNGFSDPSGLVHGHHGQHPGLPGQHGLFDRSSTLDSRA  1113

Query  969   S-RLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQI---LIS  1024
             + R  +  +         ++   + D+EH LI  Y   L Q++     R+P+ +      
Sbjct  1114  TGRSLDSASGTAGTTMSRVAAASANDEEHRLIARYAARLAQEN-----RAPSNLPDNATP  1278

Query  1025  LESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAE  1084
             + ++       ++A LE +N+ +  E  RL++Q E               T   +P +  
Sbjct  1279  IGTDNSRAQRELIAQLESKNKEIMREIARLRRQQE---------------TEQMAPENPA  1413

Query  1085  LIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTS  1144
             LI E + LRQ KG LE  +  L+D  +QL  QL  L ++L+  Q  A    T  SSP   
Sbjct  1414  LINELRALRQRKGELEGHLGALQDSRRQLMEQLEGLMRMLKN-QQTASPRSTPNSSP---  1581

Query  1145  LQRSDSSQPM  1154
               RS  S PM
Sbjct  1582  --RSGKSPPM  1605


>ref|XM_002004299.1| Drosophila mojavensis GI19671 (Dmoj\GI19671), mRNA
Length=2367

 Score =  177 bits (450),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 143/545 (26%), Positives = 245/545 (44%), Gaps = 56/545 (10%)
 Frame = +1

Query  635   LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK----QNDQPMDILQI  690
             L   +++RF++YRTA KLR +QK+  L L+ +    +A  ++ L     Q+D  + + ++
Sbjct  43    LQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSD--VSVARL  216

Query  691   INCLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCK  748
                ++++Y  L +       VP+     + LNWLL  Y +  +G+IRV S K  + ++C 
Sbjct  217   ETLVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAYSSDNSGKIRVFSIKVALATMCS  396

Query  749   AHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQ  808
               L DK RY+F Q++   G     +LG  L + + +P  + E  +F   + +  +     
Sbjct  397   GKLVDKLRYIFSQISDGAGQLVAWKLGEFLREVLALPAAVYESPTF---HYKDGLEEEIF  567

Query  809   FANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
              A NK  +   +        P  +VWLP+LHR+A  ET  H   C++C +    GFRYR 
Sbjct  568   PAENKVTVNDFMATLMSEPGPSCLVWLPLLHRLATVETIVHPTICSVCHKENFTGFRYRC  747

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR-----TK  923
              +   Y +CQ CF+ G+ +  H+  + + EY +  +  + +      L+  FR     T 
Sbjct  748   QRCHAYQLCQECFWHGKTSLNHQNDHEVKEYSSYKSPSKQI---GHSLRKSFRCVPEKTT  918

Query  924   RYFAKHPRMG--------YLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEME  975
             +   + P            +P   +   +    PA                   R + ++
Sbjct  919   QVLPRFPDQPEKTLNLSHIVPPSPLPSHNGFSDPALGHLHGPGPGPGHHPGIFDRSSTLD  1098

Query  976   N-SNGSYLNDSIS---PNESIDDEHLLIQHYCQSLNQD--SPLSQPRSPAQILISLESEE  1029
             + + G  L+ ++S      + D+EH LI  Y   L Q+  +P + P   A+ +  + ++ 
Sbjct  1099  SRATGRSLDTTMSRVAAASANDEEHRLIARYAARLAQENRAPSNMPN--AESITPIGTDN  1272

Query  1030  RGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEA  1089
                   ++A LE +N+ +  E  RL++Q E               T   +P +  LI E 
Sbjct  1273  SRAQRELIAQLESKNKEIMREIARLRRQQE---------------TEQMAPENPALINEL  1407

Query  1090  KLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSD  1149
             + LRQ KG LE  +  L+D  +QL  QL  L ++L+  Q  A    T  SSP     RS 
Sbjct  1408  RALRQRKGELEGHLGALQDSRRQLMEQLEGLMRMLKN-QQTASPRSTPNSSP-----RSG  1569

Query  1150  SSQPM  1154
              S PM
Sbjct  1570  KSPPM  1584


>ref|NM_001032237.1| Drosophila melanogaster Dystrobrevin-like (Dyb), transcript variant 
D, mRNA
Length=3387

 Score =  177 bits (450),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 141/549 (25%), Positives = 241/549 (43%), Gaps = 57/549 (10%)
 Frame = +3

Query  635   LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIIN  692
             L   +++RF++YRTA KLR +QK+  L L+ +    +A  ++ L   +    + + ++  
Sbjct  606   LQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSEVSVARLET  785

Query  693   CLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
              ++++Y  L +       VP+     + LNWLL  Y +  +G+IRV S K  + ++C   
Sbjct  786   LVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAYTSDNSGKIRVFSIKVALATMCSGK  965

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             L DK RY+F Q++   G     +LG  L + + +P  + E  +F   + +  +      A
Sbjct  966   LVDKLRYIFSQISDGAGQLVAWKLGEFLREVLALPAAVYESPTF---HYKEGLEEEIFPA  1136

Query  811   NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
              NK  +   +        P  +VWLP++HR+A  ET  H   C++C +    GFRYR  +
Sbjct  1137  ENKVTVNDFMATLMSEPGPSCLVWLPLVHRLATVETIVHPTVCSVCHKENFTGFRYRCQR  1316

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDV-----RDFAKVLKNKFRTKRY  925
                Y +CQ CF+ G+ +  H+  + + EY +  +  + +     + F  V +   +    
Sbjct  1317  CHAYQLCQECFWHGKTSLNHQNDHEVKEYSSYKSPSKQIGHSLRKSFRCVPEKTVQVLPR  1496

Query  926   FAKHPRM-----------------GYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYA  968
             F   P                   G+     ++ G +   P    Q    D  S ++  A
Sbjct  1497  FPDQPEKTLNLSHIVPPSPLPSHNGFSDPSGLVHGHHGPHPGLPGQHGLFDRSSTLDSRA  1676

Query  969   S-RLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQD--SPLSQPRSPAQILISL  1025
             + R  +  +         ++   + D+EH LI  Y   L Q+  +P + P +   I    
Sbjct  1677  TGRSLDSASGTAGTTMSRVAAASANDEEHRLIARYAARLAQENRAPSNLPDNATPIGTDN  1856

Query  1026  ESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAEL  1085
                +R     ++A LE +N+ +  E  RL++Q E               T   +P +  L
Sbjct  1857  SRAQR----ELIAQLESKNKEIMREIARLRRQQE---------------TEQMAPENPAL  1979

Query  1086  IAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSL  1145
             I E + LRQ KG LE  +  L+D  +QL  QL  L ++L+  Q  A    T  SSP    
Sbjct  1980  INELRALRQRKGELEGHLGALQDSRRQLMEQLEGLMRMLKN-QQTASPRSTPNSSP----  2144

Query  1146  QRSDSSQPM  1154
              RS  S PM
Sbjct  2145  -RSGKSPPM  2168


>ref|NM_165905.2| Drosophila melanogaster Dystrobrevin-like (Dyb), transcript variant 
C, mRNA
Length=2851

 Score =  177 bits (450),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 141/549 (25%), Positives = 241/549 (43%), Gaps = 57/549 (10%)
 Frame = +2

Query  635   LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIIN  692
             L   +++RF++YRTA KLR +QK+  L L+ +    +A  ++ L   +    + + ++  
Sbjct  125   LQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSEVSVARLET  304

Query  693   CLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
              ++++Y  L +       VP+     + LNWLL  Y +  +G+IRV S K  + ++C   
Sbjct  305   LVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAYTSDNSGKIRVFSIKVALATMCSGK  484

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             L DK RY+F Q++   G     +LG  L + + +P  + E  +F   + +  +      A
Sbjct  485   LVDKLRYIFSQISDGAGQLVAWKLGEFLREVLALPAAVYESPTF---HYKEGLEEEIFPA  655

Query  811   NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
              NK  +   +        P  +VWLP++HR+A  ET  H   C++C +    GFRYR  +
Sbjct  656   ENKVTVNDFMATLMSEPGPSCLVWLPLVHRLATVETIVHPTVCSVCHKENFTGFRYRCQR  835

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDV-----RDFAKVLKNKFRTKRY  925
                Y +CQ CF+ G+ +  H+  + + EY +  +  + +     + F  V +   +    
Sbjct  836   CHAYQLCQECFWHGKTSLNHQNDHEVKEYSSYKSPSKQIGHSLRKSFRCVPEKTVQVLPR  1015

Query  926   FAKHPRM-----------------GYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYA  968
             F   P                   G+     ++ G +   P    Q    D  S ++  A
Sbjct  1016  FPDQPEKTLNLSHIVPPSPLPSHNGFSDPSGLVHGHHGPHPGLPGQHGLFDRSSTLDSRA  1195

Query  969   S-RLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQD--SPLSQPRSPAQILISL  1025
             + R  +  +         ++   + D+EH LI  Y   L Q+  +P + P +   I    
Sbjct  1196  TGRSLDSASGTAGTTMSRVAAASANDEEHRLIARYAARLAQENRAPSNLPDNATPIGTDN  1375

Query  1026  ESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAEL  1085
                +R     ++A LE +N+ +  E  RL++Q E               T   +P +  L
Sbjct  1376  SRAQR----ELIAQLESKNKEIMREIARLRRQQE---------------TEQMAPENPAL  1498

Query  1086  IAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSL  1145
             I E + LRQ KG LE  +  L+D  +QL  QL  L ++L+  Q  A    T  SSP    
Sbjct  1499  INELRALRQRKGELEGHLGALQDSRRQLMEQLEGLMRMLKN-QQTASPRSTPNSSP----  1663

Query  1146  QRSDSSQPM  1154
              RS  S PM
Sbjct  1664  -RSGKSPPM  1687


>ref|XM_002081157.1| Drosophila simulans GD10888 (Dsim\GD10888), mRNA
Length=2226

 Score =  177 bits (449),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 139/550 (25%), Positives = 242/550 (44%), Gaps = 59/550 (10%)
 Frame = +1

Query  635   LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIIN  692
             L   +++RF++YRTA KLR +QK+  L L+ +    +A  ++ L   +    + + ++  
Sbjct  70    LQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSEVSVARLET  249

Query  693   CLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
              ++++Y  L +       VP+     + LNWLL  Y +  +G+IRV S K  + ++C   
Sbjct  250   LVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAYTSDNSGKIRVFSIKVALATMCSGK  429

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             L DK RY+F Q++   G     +LG  L + + +P  + E  +F   + +  +      A
Sbjct  430   LVDKLRYIFSQISDGAGQLVAWKLGEFLREVLALPAAVYESPTF---HYKEGLEEEIFPA  600

Query  811   NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
              NK  +   +        P  +VWLP++HR+A  ET  H   C++C +    GFRYR  +
Sbjct  601   ENKVTVNDFMATLMSEPGPSCLVWLPLVHRLATVETIVHPTVCSVCHKENFTGFRYRCQR  780

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDV-----RDFAKVLKNKFRTKRY  925
                Y +CQ CF+ G+ +  H+  + + EY +  +  + +     + F  V +   +    
Sbjct  781   CHAYQLCQECFWHGKTSLNHQNDHEVKEYSSYKSPSKQIGHSLRKSFRCVPEKTVQVLPR  960

Query  926   FAKHPRM-----------------GYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYA  968
             F   P                   G+     ++ G +   P    Q    D  S ++  A
Sbjct  961   FPDQPEKTLNLSHIVPPSPLPSHNGFSDPSGLVHGHHGPHPGLPGQHGLFDRSSTLDSRA  1140

Query  969   S-RLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQI---LIS  1024
             + R  +  +         ++   + D+EH LI  Y   L Q++     R+P+ +      
Sbjct  1141  TGRSLDSASGTAGTTMSRVAAASANDEEHRLIARYAARLAQEN-----RAPSNLPDNATP  1305

Query  1025  LESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAE  1084
             + ++       ++A LE +N+ +  E  RL++Q E               T   +P +  
Sbjct  1306  IGTDNSRAQRELIAQLESKNKEIMREIARLRRQQE---------------TEQMAPENPA  1440

Query  1085  LIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTS  1144
             LI E + LRQ KG LE  +  L+D  +QL  QL  L ++L+  Q  A    T  SSP   
Sbjct  1441  LINELRALRQRKGELEGHLGALQDSRRQLMEQLEGLMRMLKN-QQTASPRSTPNSSP---  1608

Query  1145  LQRSDSSQPM  1154
               RS  S PM
Sbjct  1609  --RSGKSPPM  1632


>ref|NM_165904.1| Drosophila melanogaster Dystrobrevin-like (Dyb), transcript variant 
A, mRNA
Length=3332

 Score =  177 bits (448),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 139/550 (25%), Positives = 242/550 (44%), Gaps = 59/550 (10%)
 Frame = +3

Query  635   LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIIN  692
             L   +++RF++YRTA KLR +QK+  L L+ +    +A  ++ L   +    + + ++  
Sbjct  606   LQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSEVSVARLET  785

Query  693   CLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
              ++++Y  L +       VP+     + LNWLL  Y +  +G+IRV S K  + ++C   
Sbjct  786   LVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAYTSDNSGKIRVFSIKVALATMCSGK  965

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             L DK RY+F Q++   G     +LG  L + + +P  + E  +F   + +  +      A
Sbjct  966   LVDKLRYIFSQISDGAGQLVAWKLGEFLREVLALPAAVYESPTF---HYKEGLEEEIFPA  1136

Query  811   NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
              NK  +   +        P  +VWLP++HR+A  ET  H   C++C +    GFRYR  +
Sbjct  1137  ENKVTVNDFMATLMSEPGPSCLVWLPLVHRLATVETIVHPTVCSVCHKENFTGFRYRCQR  1316

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDV-----RDFAKVLKNKFRTKRY  925
                Y +CQ CF+ G+ +  H+  + + EY +  +  + +     + F  V +   +    
Sbjct  1317  CHAYQLCQECFWHGKTSLNHQNDHEVKEYSSYKSPSKQIGHSLRKSFRCVPEKTVQVLPR  1496

Query  926   FAKHPRM-----------------GYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYA  968
             F   P                   G+     ++ G +   P    Q    D  S ++  A
Sbjct  1497  FPDQPEKTLNLSHIVPPSPLPSHNGFSDPSGLVHGHHGPHPGLPGQHGLFDRSSTLDSRA  1676

Query  969   S-RLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQI---LIS  1024
             + R  +  +         ++   + D+EH LI  Y   L Q++     R+P+ +      
Sbjct  1677  TGRSLDSASGTAGTTMSRVAAASANDEEHRLIARYAARLAQEN-----RAPSNLPDNATP  1841

Query  1025  LESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAE  1084
             + ++       ++A LE +N+ +  E  RL++Q E               T   +P +  
Sbjct  1842  IGTDNSRAQRELIAQLESKNKEIMREIARLRRQQE---------------TEQMAPENPA  1976

Query  1085  LIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTS  1144
             LI E + LRQ KG LE  +  L+D  +QL  QL  L ++L+  Q  A    T  SSP   
Sbjct  1977  LINELRALRQRKGELEGHLGALQDSRRQLMEQLEGLMRMLKN-QQTASPRSTPNSSP---  2144

Query  1145  LQRSDSSQPM  1154
               RS  S PM
Sbjct  2145  --RSGKSPPM  2168


>ref|NM_001032236.1| Drosophila melanogaster Dystrobrevin-like (Dyb), transcript variant 
E, mRNA
Length=3511

 Score =  177 bits (448),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 139/550 (25%), Positives = 242/550 (44%), Gaps = 59/550 (10%)
 Frame = +3

Query  635   LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIIN  692
             L   +++RF++YRTA KLR +QK+  L L+ +    +A  ++ L   +    + + ++  
Sbjct  606   LQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSEVSVARLET  785

Query  693   CLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
              ++++Y  L +       VP+     + LNWLL  Y +  +G+IRV S K  + ++C   
Sbjct  786   LVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAYTSDNSGKIRVFSIKVALATMCSGK  965

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             L DK RY+F Q++   G     +LG  L + + +P  + E  +F   + +  +      A
Sbjct  966   LVDKLRYIFSQISDGAGQLVAWKLGEFLREVLALPAAVYESPTF---HYKEGLEEEIFPA  1136

Query  811   NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
              NK  +   +        P  +VWLP++HR+A  ET  H   C++C +    GFRYR  +
Sbjct  1137  ENKVTVNDFMATLMSEPGPSCLVWLPLVHRLATVETIVHPTVCSVCHKENFTGFRYRCQR  1316

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDV-----RDFAKVLKNKFRTKRY  925
                Y +CQ CF+ G+ +  H+  + + EY +  +  + +     + F  V +   +    
Sbjct  1317  CHAYQLCQECFWHGKTSLNHQNDHEVKEYSSYKSPSKQIGHSLRKSFRCVPEKTVQVLPR  1496

Query  926   FAKHPRM-----------------GYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYA  968
             F   P                   G+     ++ G +   P    Q    D  S ++  A
Sbjct  1497  FPDQPEKTLNLSHIVPPSPLPSHNGFSDPSGLVHGHHGPHPGLPGQHGLFDRSSTLDSRA  1676

Query  969   S-RLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQI---LIS  1024
             + R  +  +         ++   + D+EH LI  Y   L Q++     R+P+ +      
Sbjct  1677  TGRSLDSASGTAGTTMSRVAAASANDEEHRLIARYAARLAQEN-----RAPSNLPDNATP  1841

Query  1025  LESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAE  1084
             + ++       ++A LE +N+ +  E  RL++Q E               T   +P +  
Sbjct  1842  IGTDNSRAQRELIAQLESKNKEIMREIARLRRQQE---------------TEQMAPENPA  1976

Query  1085  LIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTS  1144
             LI E + LRQ KG LE  +  L+D  +QL  QL  L ++L+  Q  A    T  SSP   
Sbjct  1977  LINELRALRQRKGELEGHLGALQDSRRQLMEQLEGLMRMLKN-QQTASPRSTPNSSP---  2144

Query  1145  LQRSDSSQPM  1154
               RS  S PM
Sbjct  2145  --RSGKSPPM  2168


>ref|XM_002091011.1| Drosophila yakuba GE12465 (Dyak\GE12465), mRNA
Length=2208

 Score =  177 bits (448),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 139/550 (25%), Positives = 242/550 (44%), Gaps = 59/550 (10%)
 Frame = +1

Query  635   LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIIN  692
             L   +++RF++YRTA KLR +QK+  L L+ +    +A  ++ L   +    + + ++  
Sbjct  43    LQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSEVSVARLET  222

Query  693   CLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
              ++++Y  L +       VP+     + LNWLL  Y +  +G+IRV S K  + ++C   
Sbjct  223   LVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAYTSDNSGKIRVFSIKVALATMCSGK  402

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             L DK RY+F Q++   G     +LG  L + + +P  + E  +F   + +  +      A
Sbjct  403   LVDKLRYIFSQISDGAGQLVAWKLGEFLREVLALPAAVYESPTF---HYKEGLEEEIFPA  573

Query  811   NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
              NK  +   +        P  +VWLP++HR+A  ET  H   C++C +    GFRYR  +
Sbjct  574   ENKVTVNDFMATLMSEPGPSCLVWLPLVHRLATVETIVHPTVCSVCHKENFTGFRYRCQR  753

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDV-----RDFAKVLKNKFRTKRY  925
                Y +CQ CF+ G+ +  H+  + + EY +  +  + +     + F  V +   +    
Sbjct  754   CHAYQLCQECFWHGKTSLNHQNDHEVKEYSSYKSPSKQIGHSLRKSFRCVPEKTVQVLPR  933

Query  926   FAKHPRM-----------------GYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYA  968
             F   P                   G+     ++ G +   P    Q    D  S ++  A
Sbjct  934   FPDQPEKTLNLSHIVPPSPLPSHNGFSDPSGLVHGHHGPHPGLPGQHGLFDRSSTLDSRA  1113

Query  969   S-RLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQI---LIS  1024
             + R  +  +         ++   + D+EH LI  Y   L Q++     R+P+ +      
Sbjct  1114  TGRSLDSASGTAGTTMSRVAAASANDEEHRLIARYAARLAQEN-----RAPSNLPDNATP  1278

Query  1025  LESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAE  1084
             + ++       ++A LE +N+ +  E  RL++Q E               T   +P +  
Sbjct  1279  IGTDNSRAQRELIAQLESKNKEIMREIARLRRQQE---------------TEQMAPENPA  1413

Query  1085  LIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTS  1144
             LI E + LRQ KG LE  +  L+D  +QL  QL  L ++L+  Q  A    T  SSP   
Sbjct  1414  LINELRALRQRKGELEGHLGALQDSRRQLMEQLEGLMRMLKN-QQTASPRSTPNSSP---  1581

Query  1145  LQRSDSSQPM  1154
               RS  S PM
Sbjct  1582  --RSGKSPPM  1605


>gb|AF277387.2|AF277387 Drosophila melanogaster dystrobrevin-like protein DYB (Dyb) mRNA, 
complete cds
Length=2818

 Score =  177 bits (448),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 140/551 (25%), Positives = 245/551 (44%), Gaps = 61/551 (11%)
 Frame = +2

Query  635   LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIIN  692
             L   +++RF++YRTA KLR +QK+  L L+ +    +A  ++ L   +    + + ++  
Sbjct  92    LQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSEVSVARLET  271

Query  693   CLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
              ++++Y  L +       VP+     + LNWLL  Y +  +G+IRV S K  + ++C   
Sbjct  272   LVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAYTSDNSGKIRVFSIKVALATMCSGK  451

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             L DK RY+F Q++   G     +LG  L + + +P  + E  +F   + +  +      A
Sbjct  452   LVDKLRYIFSQISDGAGQLVAWKLGEFLREVLALPAAVYESPTF---HYKEGLEEEIFPA  622

Query  811   NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
              NK  +   +        P  +VWLP++HR+A  ET  H   C++C +    GFRYR  +
Sbjct  623   ENKVTVNDFMATLMSEPGPSCLVWLPLVHRLATVETIVHPTVCSVCHKENFTGFRYRCQR  802

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDV-----RDFAKVLKNKFRTKRY  925
                Y +CQ CF+ G+ +  H+  + + EY +  +  + +     + F  V +   +    
Sbjct  803   CHAYQLCQECFWHGKTSLNHQNDHEVKEYSSYKSPSKQIGHSLRKSFRCVPEKTVQVLPR  982

Query  926   FAKHPRM-----------------GYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYA  968
             F   P                   G+     ++ G +   P    Q    D  S ++  A
Sbjct  983   FPDQPEKTLNLSHIVPPSPLPSHNGFSDPSGLVHGHHGPHPGLPGQHGLFDRSSTLDSRA  1162

Query  969   S--RLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQI---LI  1023
             +   L     + G+ ++  ++   + D+EH LI  Y   L Q++     R+P+ +     
Sbjct  1163  TGRSLDSARGTAGTTMS-RVAAASANDEEHRLIARYAARLAQEN-----RAPSNLPDNAT  1324

Query  1024  SLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDA  1083
              + ++       ++A LE +N+ +  E  RL++Q E               T   +P + 
Sbjct  1325  PIGTDNSRAQRELIAQLESKNKEIMREIARLRRQQE---------------TEQMAPENP  1459

Query  1084  ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPST  1143
              LI E + LRQ KG LE  +  L+D  +QL  QL  L ++L+  Q  A    T  SSP  
Sbjct  1460  ALINELRALRQRKGELEGHLGALQDSRRQLMEQLEGLMRMLKN-QQTASPRSTPNSSP--  1630

Query  1144  SLQRSDSSQPM  1154
                RS  S PM
Sbjct  1631  ---RSGKSPPM  1654


>ref|XM_001604052.1| PREDICTED: Nasonia vitripennis similar to dystrobrevin-like protein 
DYB (LOC100120463), mRNA
Length=3042

 Score =  177 bits (448),  Expect = 5e-41, Method: Compositional matrix adjust.
 Identities = 148/546 (27%), Positives = 249/546 (45%), Gaps = 67/546 (12%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIINCL  694
             + + +RF++YRTA KLR +QK + L  + +    +A  +++L   +    + + ++   L
Sbjct  883   NFDIIRFASYRTACKLRFIQKKVNLHNVDIWNVIEAFRENSLNTLEPSSTLSVSRLETLL  1062

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             ++++  L +    +    V     + +NWLL  Y +G   +I V S K  + +LC   L 
Sbjct  1063  SSLFHALNKRVPISQQAKVDATTALLMNWLLASYTSGENSKISVFSVKVALATLCAGKLM  1242

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK+RY+F Q+    G     R    L + + +P  + E  SFG S+    + S    +N 
Sbjct  1243  DKFRYIFSQITDGNGHMIHWRFADYLKEVLALPAAVYESPSFGYSD---GLASSIFPSNA  1413

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             K  I    FLD +  EP    ++WLP+ HR+AA E+  H   C+ C      GFRYR  K
Sbjct  1414  K--ITVNDFLDTLMSEPGPHCLIWLPLYHRMAAVESVTHPIMCDACHRENFTGFRYRCQK  1587

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYC---TPTTS-GEDVRDFAKVLKNKFRTK-RY  925
               +Y +CQ CF+ G+V+  H   +   EY    +P+   G  +R   + + +K R     
Sbjct  1588  CHSYQLCQDCFWRGKVSGTHNNDHETREYSSFKSPSKQIGHSLRKSFRCVPDKGRNSLPR  1767

Query  926   FAKHPRMG-----YLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGS  980
             F + P         +P   +   +    P            SR     S L  M+++   
Sbjct  1768  FPEQPEKTLDLSHIVPPSPIPSHNGFPDPGFMGPFDSGSLDSR-----STLRSMDSAR--  1926

Query  981   YLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADL  1040
                        +DDEH LI  Y Q L+Q++  +Q R+P+ + ++     R + E +++ L
Sbjct  1927  -----------VDDEHKLIAIYAQRLSQEA-RTQSRAPSDVNLAAIDPSRAQRE-LISQL  2067

Query  1041  EEENRNLQAEYDRLKQQH--EHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGR  1098
             E +N+ +  E  RL++Q   E  GL                  +  L++E + LRQ K  
Sbjct  2068  EAKNKEIMREITRLRRQQEIEAAGL-----------------ENPALMSELRALRQRKDE  2196

Query  1099  LEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRV  1158
             LE+ +  L+D  +QL  QL  L ++L+  QA  +      S+P++S  RS  S P+    
Sbjct  2197  LESHLATLQDSRRQLMVQLEGLMKMLKIHQASPR------STPNSS-PRSTKSPPLPPGA  2355

Query  1159  VGSQTS  1164
             V S  S
Sbjct  2356  VPSSRS  2373


>ref|NM_078988.2| Drosophila melanogaster Dystrobrevin-like (Dyb), transcript variant 
B, mRNA
Length=2818

 Score =  177 bits (448),  Expect = 5e-41, Method: Compositional matrix adjust.
 Identities = 139/550 (25%), Positives = 242/550 (44%), Gaps = 59/550 (10%)
 Frame = +2

Query  635   LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIIN  692
             L   +++RF++YRTA KLR +QK+  L L+ +    +A  ++ L   +    + + ++  
Sbjct  92    LQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSEVSVARLET  271

Query  693   CLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
              ++++Y  L +       VP+     + LNWLL  Y +  +G+IRV S K  + ++C   
Sbjct  272   LVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAYTSDNSGKIRVFSIKVALATMCSGK  451

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             L DK RY+F Q++   G     +LG  L + + +P  + E  +F   + +  +      A
Sbjct  452   LVDKLRYIFSQISDGAGQLVAWKLGEFLREVLALPAAVYESPTF---HYKEGLEEEIFPA  622

Query  811   NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
              NK  +   +        P  +VWLP++HR+A  ET  H   C++C +    GFRYR  +
Sbjct  623   ENKVTVNDFMATLMSEPGPSCLVWLPLVHRLATVETIVHPTVCSVCHKENFTGFRYRCQR  802

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDV-----RDFAKVLKNKFRTKRY  925
                Y +CQ CF+ G+ +  H+  + + EY +  +  + +     + F  V +   +    
Sbjct  803   CHAYQLCQECFWHGKTSLNHQNDHEVKEYSSYKSPSKQIGHSLRKSFRCVPEKTVQVLPR  982

Query  926   FAKHPRM-----------------GYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYA  968
             F   P                   G+     ++ G +   P    Q    D  S ++  A
Sbjct  983   FPDQPEKTLNLSHIVPPSPLPSHNGFSDPSGLVHGHHGPHPGLPGQHGLFDRSSTLDSRA  1162

Query  969   S-RLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQI---LIS  1024
             + R  +  +         ++   + D+EH LI  Y   L Q++     R+P+ +      
Sbjct  1163  TGRSLDSASGTAGTTMSRVAAASANDEEHRLIARYAARLAQEN-----RAPSNLPDNATP  1327

Query  1025  LESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAE  1084
             + ++       ++A LE +N+ +  E  RL++Q E               T   +P +  
Sbjct  1328  IGTDNSRAQRELIAQLESKNKEIMREIARLRRQQE---------------TEQMAPENPA  1462

Query  1085  LIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTS  1144
             LI E + LRQ KG LE  +  L+D  +QL  QL  L ++L+  Q  A    T  SSP   
Sbjct  1463  LINELRALRQRKGELEGHLGALQDSRRQLMEQLEGLMRMLKN-QQTASPRSTPNSSP---  1630

Query  1145  LQRSDSSQPM  1154
               RS  S PM
Sbjct  1631  --RSGKSPPM  1654


>ref|XM_001958633.1| Drosophila ananassae GF12513 (Dana\GF12513), mRNA
Length=2145

 Score =  176 bits (447),  Expect = 5e-41, Method: Compositional matrix adjust.
 Identities = 139/534 (26%), Positives = 246/534 (46%), Gaps = 55/534 (10%)
 Frame = +1

Query  635   LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIIN  692
             L   +++RF++YRTA KLR +QK+  L L+ +    +A  ++ L   +    + + ++  
Sbjct  43    LQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSEVSVARLET  222

Query  693   CLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
              ++++Y  L +       VP+     + LNWLL  Y +  +G+IRV S K  + ++C   
Sbjct  223   LVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAYTSDNSGKIRVFSIKVALATMCSGK  402

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             L DK RY+F Q++   G     +LG  L + + +P  + E  +F   + +  +      A
Sbjct  403   LVDKLRYIFSQISDGAGQLVAWKLGEFLREVLALPAAVYESPTF---HYKEGLEEEIFPA  573

Query  811   NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
              NK  +   +        P  +VWLP++HR+A  ET  H   C++C +    GFRYR  +
Sbjct  574   ENKVTVNDFMATLMSEPGPSCLVWLPLVHRLATVETIVHPTVCSVCHKENFTGFRYRCQR  753

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR-----TKRY  925
                Y +CQ CF+ G+ +  H+  + + EY +  +  + +      L+  FR     T + 
Sbjct  754   CHAYQLCQECFWHGKTSLNHQNDHEVKEYSSYKSPSKQI---GHSLRKSFRCVPEKTTQV  924

Query  926   FAKHP-------RMGYLPVQTVLEGDNMETPASSPQL-----SHD----DTHSRIEHYAS  969
               + P        + ++   + L   N  +  S P L      H     D  S ++  A+
Sbjct  925   LPRFPDQPEKTLNLSHIVPPSPLPSHNGFSDPSGPGLVPGHHGHPPGLFDRSSTLDSRAT  1104

Query  970   RLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQD--SPLSQPRSPAQILISLES  1027
               + ++++ G+ ++  ++   + D+EH LI  Y   L Q+  +P + P +   I      
Sbjct  1105  GRS-LDSATGTTMS-RVAAASANDEEHRLIARYAARLAQENRAPSNLPDNATPIGTDNSR  1278

Query  1028  EERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIA  1087
              +R     ++A LE +N+ +  E  RL++Q E               T   +P +  LI 
Sbjct  1279  AQR----ELIAQLESKNKEIMREIARLRRQQE---------------TEQMAPENPALIN  1401

Query  1088  EAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSP  1141
             E + LRQ KG LE  +  L+D  +QL  QL  L ++L+  Q  A    T  SSP
Sbjct  1402  ELRALRQRKGELEGHLGALQDSRRQLMEQLEGLMRMLKN-QQTASPRSTPNSSP  1560


>ref|XM_002059767.1| Drosophila virilis GJ15037 (Dvir\GJ15037), mRNA
Length=2379

 Score =  176 bits (447),  Expect = 6e-41, Method: Compositional matrix adjust.
 Identities = 151/565 (26%), Positives = 255/565 (45%), Gaps = 67/565 (11%)
 Frame = +1

Query  635   LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK----QNDQPMDILQI  690
             L   +++RF++YRTA KLR +QK+  L L+ +    +A  ++ L     Q+D  + + ++
Sbjct  46    LQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSD--VSVARL  219

Query  691   INCLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCK  748
                ++++Y  L +       VP+     + LNWLL  Y +  +G+IRV S K  + ++C 
Sbjct  220   ETLVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAYTSDNSGKIRVFSIKVALATMCS  399

Query  749   AHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQ  808
               L DK RY+F Q++   G     +LG  L + + +P  + E  +F   + +  +     
Sbjct  400   GKLVDKLRYIFSQISDGAGQLVAWKLGEFLREVLALPAAVYESPTF---HYKDGLEEEIF  570

Query  809   FANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
              A NK  +   +        P  +VWLP+LHR+A  ET  H   C++C +    GFRYR 
Sbjct  571   PAENKVTVNDFMATLMSEPGPSCLVWLPLLHRLATVETIVHPTICSVCHKENFTGFRYRC  750

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRT--KRYF  926
              +   Y +CQ CF+ G+ +  H+  + + EY +  +  + +      L+  FR   ++  
Sbjct  751   QRCHAYQLCQECFWHGKTSLNHQNDHEVKEYSSYKSPSKQI---GHSLRKSFRCVPEKTT  921

Query  927   AKHPRMGYLPVQTVLEGDNMETPA--------SSPQLSH---------DDTHSRIEHYAS  969
                PR    P +T L   ++  P+        S P L H                     
Sbjct  922   QVLPRFPDQPEKT-LNLSHIVPPSPLPSHNGFSDPTLGHLHGPGPGSGSGPGPGHPGIFD  1098

Query  970   RLAEMEN-SNGSYLNDSIS---PNESIDDEHLLIQHYCQSLNQD--SPLSQPRSPAQILI  1023
             R + +++ + G  L+ ++S      + D+EH LI  Y   L Q+  +P + P   A+ + 
Sbjct  1099  RSSTLDSRATGRSLDTTMSRVAAASANDEEHRLIARYAARLAQENRAPSNMPN--AESIT  1272

Query  1024  SLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDA  1083
              + ++       ++A LE +N+ +  E  RL++Q E               T   +P + 
Sbjct  1273  PIGTDNSRAQRELIAQLESKNKEIMREIARLRRQQE---------------TEQMAPENP  1407

Query  1084  ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPST  1143
              LI E + LRQ KG LE  +  L+D  +QL  QL  L ++L+  Q  A    T  SSP  
Sbjct  1408  ALINELRALRQRKGELEGHLGALQDSRRQLMEQLEGLMRMLKN-QQTASPRSTPNSSP--  1578

Query  1144  SLQRSDSSQPMLLRVVGSQTSDSMG  1168
                RS  S PM     G   + S G
Sbjct  1579  ---RSGKSPPM----PGGTATTSAG  1632


>ref|NM_001103817.1| Drosophila melanogaster Dystrobrevin-like (Dyb), transcript variant 
F, mRNA
Length=3014

 Score =  175 bits (444),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 142/550 (25%), Positives = 244/550 (44%), Gaps = 59/550 (10%)
 Frame = +3

Query  635   LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIIN  692
             L   +++RF++YRTA KLR +QK+  L L+ +    +A  ++ L   +    + + ++  
Sbjct  606   LQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSEVSVARLET  785

Query  693   CLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
              ++++Y  L +       VP+     + LNWLL  Y +  +G+IRV S K  + ++C   
Sbjct  786   LVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAYTSDNSGKIRVFSIKVALATMCSGK  965

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             L DK RY+F Q++   G     +LG  L + + +P  + E  +F   + +  +      A
Sbjct  966   LVDKLRYIFSQISDGAGQLVAWKLGEFLREVLALPAAVYESPTF---HYKEGLEEEIFPA  1136

Query  811   NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
              NK  +   +        P  +VWLP++HR+A  ET  H   C++C +    GFRYR  +
Sbjct  1137  ENKVTVNDFMATLMSEPGPSCLVWLPLVHRLATVETIVHPTVCSVCHKENFTGFRYRCQR  1316

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDV-----RDFAKVLKNKFRTKRY  925
                Y +CQ CF+ G+ +  H+  + + EY +  +  + +     + F  V +   +    
Sbjct  1317  CHAYQLCQECFWHGKTSLNHQNDHEVKEYSSYKSPSKQIGHSLRKSFRCVPEKTVQVLPR  1496

Query  926   FAKHPRM-----------------GYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYA  968
             F   P                   G+     ++ G +   P    Q    D  S ++  A
Sbjct  1497  FPDQPEKTLNLSHIVPPSPLPSHNGFSDPSGLVHGHHGPHPGLPGQHGLFDRSSTLDSRA  1676

Query  969   S--RLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQD--SPLSQPRSPAQILIS  1024
             +   L     + G+ ++  ++   + D+EH LI  Y   L Q+  +P + P +   I   
Sbjct  1677  TGRSLDSASGTAGTTMS-RVAAASANDEEHRLIARYAARLAQENRAPSNLPDNATPIGTD  1853

Query  1025  LESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAE  1084
                 +R     ++A LE +N+ +  E  RL++Q E               T   +P +  
Sbjct  1854  NSRAQR----ELIAQLESKNKEIMREIARLRRQQE---------------TEQMAPENPA  1976

Query  1085  LIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTS  1144
             LI E + LRQ KG LE  +  L+D  +QL  QL  L ++L+  Q  A    T  SSP   
Sbjct  1977  LINELRALRQRKGELEGHLGALQDSRRQLMEQLEGLMRMLKN-QQTASPRSTPNSSP---  2144

Query  1145  LQRSDSSQPM  1154
               RS  S PM
Sbjct  2145  --RSGKSPPM  2168


>gb|DQ516345.1| Danio rerio beta-dystrobrevin (BDTN) mRNA, complete cds
Length=2204

 Score =  175 bits (444),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 154/593 (25%), Positives = 271/593 (45%), Gaps = 86/593 (14%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D    +++ ++   L
Sbjct  76    NFDVIRLSTYRTACKLRFVQKRCNLHLVDVWNMIEAFRDNGLSTLDHNAEINVSRLETIL  255

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++I+     RL   H   +NV   + + LN+++  YD+   G++ V + K  + ++C   
Sbjct  256   SSIFYQLNKRLPTTHQ--INVEQSIGLLLNFIVATYDSEGHGKLTVFAMKAMLATMCGGK  429

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  430   ILDKLRYVFSQISDSNGVMVFAKFDQFLREVLKLPTAVFEGPSFGYT--EHSVRTCFP--  597

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I    FLD +  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  598   -QQKKILLNTFLDVLMADPPPQCLVWLPLMHRLANVENVFHPVECSYCRSESMMGFRYRC  774

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK  928
              +   Y +CQSCF+ G  +  H   + M E+          +  AK L +        A 
Sbjct  775   QQCHGYQLCQSCFWRGHASGPHSNQHQMKEH-------SSWKSPAKKLSH--------AI  909

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISP  988
                +G +P+         E P           H      A R  ++ ++       ++  
Sbjct  910   SKSLGCMPIG--------EPP-----------HPVFPEAAERPQDLAHTT------TLES  1014

Query  989   NESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQ  1048
                +D+EH LI  Y   L  ++  S    P+ +  + ++ +  +  +++A+LE +NR + 
Sbjct  1015  PSRLDEEHRLIARYAARLAAEASNSTQCPPSDLSFNFDANK--QQRQLIAELENKNREIL  1188

Query  1049  AEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILED  1108
              E  RL+ +HE     P P   +  PT         L+AE +LLR  K  LE RM  L++
Sbjct  1189  QEIQRLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRHRKDELERRMSALQE  1338

Query  1109  HNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMG  1168
               ++L  QL  L +LL+          T  S  S+    +  + PM +R   + ++ +  
Sbjct  1339  SRRELMVQLEGLMRLLKA--------QTGTSPHSSPSHSASCTMPMPIRSTSAGSTPT--  1488

Query  1169  EEDLLSPPQDTSTGL-EEVMEQLNNSFPSSRGHNVGSLFHMADDLGRAMESLV  1220
                    PQD   G+ ++V++  +   P +  ++   L   AD +   M SLV
Sbjct  1489  -----HTPQDCLAGVGDDVLDAFSQGVPRNLRND---LLVAADSITNTMSSLV  1623


>ref|XM_002033526.1| Drosophila sechellia GM21392 (Dsec\GM21392), mRNA
Length=2511

 Score =  175 bits (444),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 141/550 (25%), Positives = 243/550 (44%), Gaps = 59/550 (10%)
 Frame = +1

Query  635   LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIIN  692
             L   +++RF++YRTA KLR +QK+  L L+ +    +A  ++ L   +    + + ++  
Sbjct  70    LQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSEVSVARLET  249

Query  693   CLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
              ++++Y  L +       VP+     + LNWLL  Y +  +G+IRV S K  + ++C   
Sbjct  250   LVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAYTSDNSGKIRVFSIKVALATMCSGK  429

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             L DK RY+F Q++   G     +LG  L + + +P  + E  +F   + +  +       
Sbjct  430   LVDKLRYIFSQISDGAGQLVAWKLGEFLREVLALPAAVYESPTF---HYKEGLEEEIFPT  600

Query  811   NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
              NK  +   +        P  +VWLP++HR+A  ET  H   C++C +    GFRYR  +
Sbjct  601   ENKVTVNDFMATLMSEPGPSCLVWLPLVHRLATVETIVHPTVCSVCHKENFTGFRYRCQR  780

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDV-----RDFAKVLKNKFRTKRY  925
                Y +CQ CF+ G+ +  H+  + + EY +  +  + +     + F  V +   +    
Sbjct  781   CHAYQLCQECFWHGKTSLNHQNDHEVKEYSSYKSPSKQIGHSLRKSFRCVPEKTVQVLPR  960

Query  926   FAKHPRM-----------------GYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYA  968
             F   P                   G+     ++ G +   P    Q    D  S ++  A
Sbjct  961   FPDQPEKTLNLSHIVPPSPLPSHNGFSDPSGLVHGHHGPHPGLPGQHGLFDRSSTLDSRA  1140

Query  969   S--RLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQD--SPLSQPRSPAQILIS  1024
             +   L     + G+ ++  ++   + D+EH LI  Y   L Q+  +P + P +   I   
Sbjct  1141  TGRSLDSASGTAGTTMS-RVAAASANDEEHRLIARYAARLAQENRAPSNLPDNATPIGTD  1317

Query  1025  LESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAE  1084
                 +R     ++A LE +N+ +  E  RL++Q E               T   +P +  
Sbjct  1318  NSRAQR----ELIAQLESKNKEIMREIARLRRQQE---------------TEQMAPENPA  1440

Query  1085  LIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTS  1144
             LI E + LRQ KG LE  +  L+D  +QL  QL  L ++L+  Q  A    T  SSP   
Sbjct  1441  LINELRALRQRKGELEGHLGALQDSRRQLMEQLEGLMRMLKN-QQTASPRSTPNSSP---  1608

Query  1145  LQRSDSSQPM  1154
               RS  S PM
Sbjct  1609  --RSGKSPPM  1632


>ref|XM_395141.3| PREDICTED: Apis mellifera similar to Dystrobrevin-like CG8529-PA, 
isoform A, transcript variant 1 (LOC411673), partial mRNA
Length=3816

 Score =  175 bits (444),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 150/536 (27%), Positives = 251/536 (46%), Gaps = 47/536 (8%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIINCL  694
             + + +RF++YRTA KLR +QK + L  + +    +A  ++ L   +    + + ++   L
Sbjct  112   NFDTIRFASYRTACKLRFIQKKVHLHNVDIWNVIEAFRENGLNTLEPSSTLGVSRLETLL  291

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             ++++  L +    +    V     + +NWL+  Y TG   +I V S K  + +LC   L 
Sbjct  292   SSLFHALNKRVPVSQQAKVDATTALLMNWLIAAYTTGENNKISVFSVKVALATLCAGKLM  471

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK+RY++ Q++ S G     R    L + + +   + E  SFG S  E    S F   N+
Sbjct  472   DKFRYIYSQISDSNGHMIHWRFSEYLKEVLSLTAAVYESPSFGYS--EGLANSIFP-QNS  642

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             K  +    FLD +  +P    ++WLP+ HR+AA ET  H   C+ C +    GFRYR  K
Sbjct  643   KVTVND--FLDTLMSDPGPHCLIWLPLYHRMAAVETVAHPVMCDACHKENFTGFRYRCQK  816

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKH-  929
               +Y +CQ CF+ G+V+  H   +   EY +  +  + +      L+  FR      K+ 
Sbjct  817   CHSYQLCQDCFWRGKVSGTHNNDHETREYSSFKSPSKQI---GHSLRKSFRCVPEKGKNS  987

Query  930   -PRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSISP  988
              PR    P +T L+  ++  P  SP  SH+               M++ +     DS   
Sbjct  988   LPRFPEQPEKT-LDLSHIVPP--SPLPSHNGFPDPGFMAPFDSGSMDSRSTLRSMDS---  1149

Query  989   NESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQ  1048
                +DDEH LI  Y Q L Q++  +  R+P+   ++     R + E +++ LE +N+ + 
Sbjct  1150  -SRLDDEHKLIARYAQRLAQEA-RTMGRTPSDANLASLDASRAQRE-LISQLEAKNKEIM  1320

Query  1049  AEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILED  1108
              E  RL++Q E +    L +P               L++E + LRQ K  LE  +  L+D
Sbjct  1321  REIARLRRQQEIEAAG-LENP--------------ALMSELRALRQRKDELETHLATLQD  1455

Query  1109  HNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTS  1164
               +QL  QL  L ++L+  QA  +      S+P++S  RS  S P+    V S  S
Sbjct  1456  SRRQLMVQLEGLMKMLKNHQASPR------STPNSS-PRSTKSPPLPPGAVPSSRS  1602


>ref|XM_001191124.1| PREDICTED: Strongylocentrotus purpuratus similar to dystrobrevin 
alpha isoform 2 variant (LOC592642), mRNA
Length=2184

 Score =  175 bits (444),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 237/526 (45%), Gaps = 74/526 (14%)
 Frame = +1

Query  694   LTTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKA  749
             L++IY     RL   H   +NV   + +  N+L   YD G TG++ V + K  + +LC  
Sbjct  226   LSSIYYQLNKRLPAVHQ--INVDQFLSLLCNFLQTAYDDGATGKMTVFALKVALSTLCAG  399

Query  750   HLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQF  809
              L DK RY+F Q++   G     +    L   +Q+P  + E  SFG    E + ++CF  
Sbjct  400   KLSDKLRYIFSQISDGNGILIHSKFDEYLKLVLQLPTAVFEGPSFGYD--ENTAKACFG-  570

Query  810   ANNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYR  867
             AN +  +    FLD +  EP  Q ++WL ++HR++  E   H  +C+ C    ++GFRY+
Sbjct  571   ANRRVTLND--FLDTVLAEPGPQCLMWLSLMHRMSNVENVFHPVECSHCHSDSMMGFRYK  744

Query  868   SLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFA  927
               +  NY +CQ+CF+ G  +  H   + M EY   ++     +   K LK  F++     
Sbjct  745   CQRCSNYQLCQNCFWRGYTSGNHSTDHEMKEY---SSYKSPAKKMGKALKKPFKSP---L  906

Query  928   KHPRMGYLP--VQTVLEGDNMETPASSPQLSHDDTHS-RIEHYASRLAEMENSNGSYLND  984
             K PR+ + P   +  L+  ++  P+    L++D   S RI        +M NS  S    
Sbjct  907   KQPRVQHYPEEPERPLDLSHIVPPSPITILTYDSPDSTRILRTEEDFKKMNNSLDS----  1074

Query  985   SISPNESIDDEHLLIQHYCQSLNQDS--PLSQPRSPAQILISLESEERGELERILADLEE  1042
                    +DDEH LI  Y   L   S  P S P  P  +  + E  E      ++  LE 
Sbjct  1075  -----ARLDDEHRLIARYAARLANASANPNSGPELPPGLDANREQRE------LIMQLES  1221

Query  1043  ENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEAR  1102
             +NR +  E  RL+Q+H+                S  S R+  L+AE +LLRQ K  LE R
Sbjct  1222  KNREIMREIQRLRQEHDEA------------VRSSHSQRNPTLLAELRLLRQRKDELELR  1365

Query  1103  MQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTS------LQRSDSSQPMLL  1156
             M  L++  ++L  QL  L +LL       K +G+  +SP+ S      L    S+QP   
Sbjct  1366  MAALQESRRELMVQLEGLMKLL-------KNHGSPRNSPNHSPRPNQPLTPGSSTQPSRA  1524

Query  1157  RVV------GSQTSDSMGE----EDLLSPPQDTSTGLEEVMEQLNN  1192
                      G QT  + G      DLL      +  +  ++ +LN+
Sbjct  1525  ATTTDTVRNGEQTGGTTGSRSLRNDLLVAADSVTNAMSSLVRELNS  1662


>ref|XM_792154.2| PREDICTED: Strongylocentrotus purpuratus similar to dystrobrevin 
alpha isoform 2 variant (LOC592642), mRNA
Length=2184

 Score =  175 bits (444),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 237/526 (45%), Gaps = 74/526 (14%)
 Frame = +1

Query  694   LTTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKA  749
             L++IY     RL   H   +NV   + +  N+L   YD G TG++ V + K  + +LC  
Sbjct  226   LSSIYYQLNKRLPAVHQ--INVDQFLSLLCNFLQTAYDDGATGKMTVFALKVALSTLCAG  399

Query  750   HLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQF  809
              L DK RY+F Q++   G     +    L   +Q+P  + E  SFG    E + ++CF  
Sbjct  400   KLSDKLRYIFSQISDGNGILIHSKFDEYLKLVLQLPTAVFEGPSFGYD--ENTAKACFG-  570

Query  810   ANNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYR  867
             AN +  +    FLD +  EP  Q ++WL ++HR++  E   H  +C+ C    ++GFRY+
Sbjct  571   ANRRVTLND--FLDTVLAEPGPQCLMWLSLMHRMSNVENVFHPVECSHCHSDSMMGFRYK  744

Query  868   SLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFA  927
               +  NY +CQ+CF+ G  +  H   + M EY   ++     +   K LK  F++     
Sbjct  745   CQRCSNYQLCQNCFWRGYTSGNHSTDHEMKEY---SSYKSPAKKMGKALKKPFKSP---L  906

Query  928   KHPRMGYLP--VQTVLEGDNMETPASSPQLSHDDTHS-RIEHYASRLAEMENSNGSYLND  984
             K PR+ + P   +  L+  ++  P+    L++D   S RI        +M NS  S    
Sbjct  907   KQPRVQHYPEEPERPLDLSHIVPPSPITILTYDSPDSTRILRTEEDFKKMNNSLDS----  1074

Query  985   SISPNESIDDEHLLIQHYCQSLNQDS--PLSQPRSPAQILISLESEERGELERILADLEE  1042
                    +DDEH LI  Y   L   S  P S P  P  +  + E  E      ++  LE 
Sbjct  1075  -----ARLDDEHRLIARYAARLANASANPNSGPELPPGLDANREQRE------LIMQLES  1221

Query  1043  ENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEAR  1102
             +NR +  E  RL+Q+H+                S  S R+  L+AE +LLRQ K  LE R
Sbjct  1222  KNREIMREIQRLRQEHDEA------------VRSSHSQRNPTLLAELRLLRQRKDELELR  1365

Query  1103  MQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTS------LQRSDSSQPMLL  1156
             M  L++  ++L  QL  L +LL       K +G+  +SP+ S      L    S+QP   
Sbjct  1366  MAALQESRRELMVQLEGLMKLL-------KNHGSPRNSPNHSPRPNQPLTPGSSTQPSRA  1524

Query  1157  RVV------GSQTSDSMGE----EDLLSPPQDTSTGLEEVMEQLNN  1192
                      G QT  + G      DLL      +  +  ++ +LN+
Sbjct  1525  ATTTDTVRNGEQTGGTTGSRSLRNDLLVAADSVTNAMSSLVRELNS  1662


>ref|XM_002187356.1| PREDICTED: Taeniopygia guttata similar to dystrotelin (LOC100224327), 
mRNA
Length=1701

 Score =  174 bits (442),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 100/291 (34%), Positives = 153/291 (52%), Gaps = 8/291 (2%)
 Frame = +1

Query  638  LNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ-PMDILQIINCLTT  696
             ++V  S YRTA+KLR +Q+   LDL+ +S     L     ++ +Q  +++ QI   L  
Sbjct  25   FSDVESSVYRTALKLRSVQRLCQLDLIDVSLIQHILSSEQRQREEQISLNMQQISRMLMK  204

Query  697  IYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYR  756
            ++ R   E    V+ P   +  L  L+ +YD   TG ++  S    +ISL    L  KYR
Sbjct  205  LFQRARLEKPGQVD-PRAAEFTLGLLIAMYDRSGTGYVKTRSAAAALISLSGDTLLAKYR  381

Query  757  YLFKQVASSTG---FCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNK  813
              F+  A   G         L  LL D  QIP  +GE  +   S +E ++  CF    N 
Sbjct  382  AFFQFYAVHDGKETLITCSALRSLLRDLNQIPAIVGEGCTL--SCVEIAIHDCFHGVLNA  555

Query  814  PEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFN  873
              +E   FL W+R EP  ++WLP  +R++A E   HQA+C +CK  PI G RYR LK  N
Sbjct  556  AIVEEK-FLSWLRSEPALLLWLPTCYRLSAMEMVSHQARCRVCKVFPITGIRYRCLKCLN  732

Query  874  YDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKR  924
            +D+CQ+CFF+GR+ K HK  +P+VE+C   ++  + + F + ++N    +R
Sbjct  733  FDLCQACFFTGRLCKPHKRSHPVVEHCVQMSAKANAKHFLRTIRNNLFQER  885


>ref|XM_001987489.1| Drosophila grimshawi GH21967 (Dgri\GH21967), mRNA
Length=2469

 Score =  174 bits (442),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 143/534 (26%), Positives = 246/534 (46%), Gaps = 56/534 (10%)
 Frame = +1

Query  635   LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK----QNDQPMDILQI  690
             L   +++RF++YRTA KLR +QK+  L L+ +    +A  ++ L     Q+D  + + ++
Sbjct  43    LQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSD--VSVARL  216

Query  691   INCLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCK  748
                ++++Y  L +       VP+     + LNWLL  Y +  +G+IRV S K  + ++C 
Sbjct  217   ETLVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAYTSDNSGKIRVFSIKVALATMCS  396

Query  749   AHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQ  808
               L DK RY+F Q++   G     +LG  L + + +P  + E  +F   + +  +     
Sbjct  397   GKLVDKLRYIFSQISDGAGQLVAWKLGEFLREVLALPAAVYESPTF---HYKEGLEEEIF  567

Query  809   FANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
              A NK  +   +        P  +VWLP+LHR+A  ET  H   C++C +    GFRYR 
Sbjct  568   PAENKVTVNDFMATLMSEPGPSCLVWLPLLHRLATVETIVHPTICSVCHKENFTGFRYRC  747

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRT--KRYF  926
              +   Y +CQ CF+ G+ +  H+  + + EY +  +  + +      L+  FR   ++  
Sbjct  748   QRCHAYQLCQECFWHGKTSLNHQNDHEVKEYSSYKSPSKQI---GHSLRKSFRCVPEKTT  918

Query  927   AKHPRMGYLPVQTVLEGDNMETPASSPQLSHDD-------------THSRIEHYASRLAE  973
                PR    P +T L   ++  P  SP  SH+                        R + 
Sbjct  919   QVLPRFPDQPEKT-LNLSHIVPP--SPLPSHNGFSDPALAHLHGPGPGPGHSGIFDRSST  1089

Query  974   MEN-SNGSYLNDSIS---PNESIDDEHLLIQHYCQSLNQD--SPLSQPRSPAQILISLES  1027
             +++ + G  L+ ++S      + D+EH LI  Y   L Q+  +P + P   A+ +  + +
Sbjct  1090  LDSRATGRSLDTTMSRVAAASANDEEHRLIARYAARLAQENRAPSNMPN--AESITPIGT  1263

Query  1028  EERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIA  1087
             +       ++A LE +N+ +  E  RL++Q E               T   +P +  LI 
Sbjct  1264  DNSRAQRELIAQLESKNKEIMREIARLRRQQE---------------TEQMAPENPALIN  1398

Query  1088  EAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSP  1141
             E + LRQ KG LE  +  L+D  +QL  QL  L ++L+  Q  A    T  SSP
Sbjct  1399  ELRALRQRKGELEGHLGALQDSRRQLMEQLEGLMRMLKN-QQTASPRSTPNSSP  1557


>ref|XM_001948373.1| PREDICTED: Acyrthosiphon pisum similar to Dystrobrevin-like CG8529-PF 
(LOC100163134), mRNA
Length=2267

 Score =  174 bits (441),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 143/520 (27%), Positives = 245/520 (47%), Gaps = 60/520 (11%)
 Frame = +3

Query  641   VRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIINCLTTIY  698
             +RF++YRTA KLR +QK + L ++ +    +A  ++ L   ++   +++ +    +T++Y
Sbjct  315   IRFASYRTACKLRYVQKKVYLHMIDIWNVIEAFRENGLNTLESHVEVNVSKFETLITSLY  494

Query  699   DRLE-----QEHNNLVNVPLCVDMCLNWLLNVYDTGRT-GRIRVLSFKTGIISLCKAHLE  752
               L      Q+H   V+  L   + LNW+++VY    T GRIRVLS K  ++++C   L 
Sbjct  495   LNLNKRLPTQQH---VHDDLLTTILLNWIMSVYSANDTMGRIRVLSIKVALVTMCSGKLM  665

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSN-IEPSVRSCFQFAN  811
             DK RY+F Q+    G     +    L + + +P  + E  SF  ++ I   +     F+ 
Sbjct  666   DKLRYIFSQICDQNGHMVAWKFREYLQEVLVLPSAVYESPSFHYTDQISAEI-----FSG  830

Query  812   NKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  869
             N  ++    F+D M  +P    +VWLP+LHR+A  E   H   C+ C+     GFRYR  
Sbjct  831   NG-KVTVNDFMDSMMSDPGPACLVWLPLLHRLANVENVTHPISCDACRRDNFTGFRYRCQ  1007

Query  870   KHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRT--KRYFA  927
             K  N+ +CQ CF+ GRVA  H + + + EY   T+     +     L+  FR   ++  A
Sbjct  1008  KCHNFQMCQECFWRGRVASSHTIEHDVKEY---TSYKSPSKQIGHSLRKSFRCVPEKEKA  1178

Query  928   KHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSIS  987
               PR    P +T+    N+        L   +  S +   +S+   +++   S   D  +
Sbjct  1179  NIPRFPEEPEKTI----NLSHIIPPSPLPCHNGFSELS-ISSQFNTLDSKTSSRSPDKRT  1343

Query  988   PN---ESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEEN  1044
              +    S+DDEH LI  Y   L  +         A+++  + ++       ++  LE +N
Sbjct  1344  MSLDYTSMDDEHKLIARYAARLAAE---------AKVVSCIIAQ-----RELIIQLESKN  1481

Query  1045  RNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQ  1104
             R +  E  +L++Q E +G             S  S  +  L++E + LR  K  LE+ + 
Sbjct  1482  REIMKEISKLRKQQEMEGF-----------CSGYSEDNPALMSELRALRNRKHELESHLT  1628

Query  1105  ILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTS  1144
              L+D  +QL  QL  L +LL+  Q   +   T  SSP ++
Sbjct  1629  SLQDSRRQLMDQLEGLMKLLKNHQGSPR--STPNSSPRST  1742


>emb|BX323090.7| Zebrafish DNA sequence from clone CH211-274B7 in linkage group 
1, complete sequence
Length=166353

 Score =  101 bits (251),  Expect(2) = 1e-39, Method: Compositional matrix adjust.
 Identities = 45/46 (97%), Positives = 46/46 (100%), Gaps = 0/46 (0%)
 Frame = +3

Query  903     TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET  948
               TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQT+LEGDNMET
Sbjct  117315  TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTILEGDNMET  117452


 Score = 92.4 bits (228),  Expect(2) = 1e-39, Method: Compositional matrix adjust.
 Identities = 37/41 (90%), Positives = 39/41 (95%), Gaps = 0/41 (0%)
 Frame = +1

Query  864     FRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTT  904
               +RYRSLKHFNYDICQSCFFSGRVAKGHKM YPMVEYCTP +
Sbjct  117082  YRYRSLKHFNYDICQSCFFSGRVAKGHKMQYPMVEYCTPVS  117204


 Score =  150 bits (380),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 74/82 (90%), Positives = 78/82 (95%), Gaps = 0/82 (0%)
 Frame = +2

Query  1045    RNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQ  1104
               R LQAEYDRLK+ H+HKGLSPLPSPP+M+P SPQSPRDAELIAEAKLLRQHKGRLEARMQ
Sbjct  134822  RKLQAEYDRLKKAHDHKGLSPLPSPPQMLPVSPQSPRDAELIAEAKLLRQHKGRLEARMQ  135001

Query  1105    ILEDHNKQLESQLHRLRQLLEQ  1126
               ILEDHNKQLESQL RLRQLLEQ
Sbjct  135002  ILEDHNKQLESQLTRLRQLLEQ  135067


 Score =  135 bits (340),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 71/160 (44%), Positives = 97/160 (60%), Gaps = 28/160 (17%)
 Frame = +3

Query  389    RAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEK------------LYQEPR-------  429
              +AF+REL  KEPVI  TL+  + FL E P EGL++             Y   R       
Sbjct  74820  QAFRRELGAKEPVINGTLDNAKTFLAEMPREGLKQRPGQKGIAFVLPFYTYSRYNHRL*P  74999

Query  430    ---------ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
                       ++ PEER QNV R+LRK+ E+V   W+ L   S DWQ++++  LERL ELQ
Sbjct  75000  VFLPLM*CADVSPEERVQNVGRILRKEVEDVTVRWKNLGAASVDWQQQLELALERLMELQ  75179

Query  481    EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKA  520
              +A D+LD KLRQAE +K SW+PVG+LL+D LQ+H+++VK 
Sbjct  75180  DAQDQLDYKLRQAESVKNSWKPVGELLVDDLQNHIDRVKV  75299


 Score =  126 bits (316),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 55/68 (80%), Positives = 64/68 (94%), Gaps = 1/68 (1%)
 Frame = +1

Query  810     ANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS-  868
               ANNKPE+EA++FLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRY   
Sbjct  114835  ANNKPELEASVFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYGPF  115014

Query  869     LKHFNYDI  876
               L+++++ +
Sbjct  115015  LQYYSFRV  115038


 Score =  122 bits (307),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 59/97 (60%), Positives = 73/97 (75%), Gaps = 17/97 (17%)
 Frame = +3

Query  661     LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
               +DLLS+ AAC+A +QHNLKQN+Q MDI+Q+INCLT+IYDRLEQ+H++LVNVPLCVDMCLN
Sbjct  102840  VDLLSMPAACEAFEQHNLKQNEQFMDIVQVINCLTSIYDRLEQQHSSLVNVPLCVDMCLN  103019

Query  721     WLLNVYDT-----------------GRTGRIRVLSFK  740
               WLLNVYDT                    G+IR+L F+
Sbjct  103020  WLLNVYDTYV*PVYYCCFACLNGSLFTRGKIRLLCFQ  103130


 Score =  110 bits (275),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 54/55 (98%), Gaps = 0/55 (0%)
 Frame = +2

Query  758     LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
               LF++VAS+TGFCDQRRLGLLLHD+IQIPRQLGEVASFGGSNIEPSVRSCFQF +N
Sbjct  112436  LFREVASATGFCDQRRLGLLLHDAIQIPRQLGEVASFGGSNIEPSVRSCFQFVSN  112600


 Score = 96.7 bits (239),  Expect = 8e-17, Method: Compositional matrix adjust.
 Identities = 45/53 (84%), Positives = 51/53 (96%), Gaps = 0/53 (0%)
 Frame = +3

Query  993     DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  1045
               DDEHLLIQHYCQSLNQ SPLSQP+SPAQILIS+E+EE+GELER+L DLE+ENR
Sbjct  128427  DDEHLLIQHYCQSLNQGSPLSQPQSPAQILISMETEEKGELERVLNDLEQENR  128585


 Score = 60.8 bits (146),  Expect(2) = 3e-15, Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 41/53 (77%), Gaps = 0/53 (0%)
 Frame = +1

Query  164    KQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKR  216
              +QL+KDL+QWQT ++V N+LA KLL  Y+ DDT KV  +TE++N +W +I KR
Sbjct  61951  QQLSKDLQQWQTQMNVTNELANKLLTLYADDDTSKVKQMTESMNLAWANIKKR  62109


 Score = 50.8 bits (120),  Expect(2) = 3e-15, Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 0/71 (0%)
 Frame = +2

Query  94     IERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTV  153
              +E++Q  W++    L  R   L  M KDS+ WLEA++  E ++ +A  KLESWK+  ++V
Sbjct  61667  VEKLQAHWEDSHAKLTARVLTLQNMYKDSSDWLEARKRVEPLIKKANEKLESWKKVSHSV  61846

Query  154    DAIQKKITETK  164
              + ++ +  + K
Sbjct  61847  EDLKGQNADVK  61879


 Score = 80.9 bits (198),  Expect = 4e-12, Method: Compositional matrix adjust.
 Identities = 37/67 (55%), Positives = 51/67 (76%), Gaps = 0/67 (0%)
 Frame = +2

Query  271    VKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELR  330
              V +L   WQDLQ EI+AH + YH+LDEN  +I+ SLEG+D+AV+LQ+RLD+M  +W EL 
Sbjct  70259  VCDLF*SWQDLQAEIDAHRETYHSLDENGHRIVSSLEGTDNAVVLQKRLDDMGQRWHELC  70438

Query  331    KKSLNIR  337
               K ++IR
Sbjct  70439  NKVMSIR  70459


 Score = 76.3 bits (186),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 40/63 (63%), Positives = 47/63 (74%), Gaps = 0/63 (0%)
 Frame = +1

Query  217    VSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMK  276
                ++EA LE   R LQ + LDLEKFL WLTEAETTANVLQDAT KE LLE+   V+ L++
Sbjct  63910  AGDKEADLEAGLRQLQHYYLDLEKFLNWLTEAETTANVLQDATFKEGLLENPATVRHLLE  64089

Query  277    QWQ  279
              QWQ
Sbjct  64090  QWQ  64098


 Score = 70.1 bits (170),  Expect = 8e-09, Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 0/63 (0%)
 Frame = +1

Query  336    IRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKREL  395
              +R +L+A  DQWK LH+SLQELL WLQLK +EL +Q P+GGD P V +Q   H+    ++
Sbjct  71902  LRPYLDAGVDQWKHLHMSLQELLNWLQLKREELEKQKPVGGDVPTVHQQLLTHKVSPGQI  72081

Query  396    KTK  398
              + K
Sbjct  72082  QFK  72090


 Score = 65.5 bits (158),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 38/46 (82%), Gaps = 0/46 (0%)
 Frame = +1

Query  10     PALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKA  55
               AL  FN++WTEL DWL+LLD ++++QRVMVGDL++INEM +K K 
Sbjct  58012  AALDKFNKSWTELDDWLALLDHMVQTQRVMVGDLDEINEMTVKLKV  58149


 Score = 61.6 bits (148),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 0/51 (0%)
 Frame = +1

Query  519    KALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQV  569
              +A + EIAP+++NV+HVN LA       IQLSP NLS ++DLN RW+LLQV
Sbjct  78775  QAFQEEIAPIQDNVNHVNQLASTFRPSDIQLSPDNLSRIDDLNMRWRLLQV  78927


 Score = 58.2 bits (139),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 26/31 (83%), Positives = 27/31 (87%), Gaps = 0/31 (0%)
 Frame = +1

Query  729     GRTGRIRVLSFKTGIISLCKAHLEDKYRYLF  759
               GR G+IR LSFKTGIISLCKAHLEDKYR  F
Sbjct  109951  GRAGKIRTLSFKTGIISLCKAHLEDKYRCKF  110043


 Score = 55.1 bits (131),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 26/35 (74%), Positives = 28/35 (80%), Gaps = 0/35 (0%)
 Frame = +1

Query  636     ADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAAC  670
               ADLNNVRFSAYRTAMKLRR+QKALC     L+  C
Sbjct  100579  ADLNNVRFSAYRTAMKLRRMQKALCCKSTPLTFYC  100683


 Score = 54.7 bits (130),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 26/40 (65%), Positives = 32/40 (80%), Gaps = 0/40 (0%)
 Frame = +3

Query  54     KATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR  93
              ++ +QD+EQR PQL + ITAAQNLKNKT+N E R  ITDR
Sbjct  59928  QSALQDMEQRCPQLNKQITAAQNLKNKTNNPETRATITDR  60047


 Score = 53.5 bits (127),  Expect = 8e-04, Method: Compositional matrix adjust.
 Identities = 23/34 (67%), Positives = 28/34 (82%), Gaps = 0/34 (0%)
 Frame = +2

Query  1194    FPSSRGHNVGSLFHMADDLGRAMESLVSVMTDEE  1227
               FPS  G NVGSLFHM D++G AMESLV V+T+E+
Sbjct  151334  FPSPSGPNVGSLFHMVDNIGHAMESLVHVITEEQ  151435


 Score = 49.7 bits (117),  Expect = 0.010, Method: Compositional matrix adjust.
 Identities = 23/26 (88%), Positives = 24/26 (92%), Gaps = 0/26 (0%)
 Frame = +3

Query  945     NMETPASSPQLSHDDTHSRIEHYASR  970
               +M  PASSPQLSHDDTHSRIEHYASR
Sbjct  122844  SMLRPASSPQLSHDDTHSRIEHYASR  122921


 Score = 48.9 bits (115),  Expect = 0.016, Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 28/32 (87%), Gaps = 0/32 (0%)
 Frame = +2

Query  1168    GEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG  1199
               G+++L SP QD STGLE+V+EQLNNSFP S+G
Sbjct  147566  GDDELSSPTQDASTGLEDVIEQLNNSFPHSQG  147661


 Score = 47.0 bits (110),  Expect = 0.064, Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
 Frame = +2

Query  1127    PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGE  1169
               PQ E+KVNGT +SSPST+  RSD+S    LRV  SQT+++MG+
Sbjct  141356  PQTESKVNGTALSSPSTASPRSDTSL-ASLRVAASQTTETMGK  141481


 Score = 47.0 bits (110),  Expect = 0.069, Method: Compositional matrix adjust.
 Identities = 19/25 (76%), Positives = 22/25 (88%), Gaps = 0/25 (0%)
 Frame = +1

Query  616    HETQTTCWDHPKMTELYQSLADLNN  640
              H+TQTTCWDHPKM ELYQSL  L++
Sbjct  98158  HQTQTTCWDHPKMAELYQSLGWLDS  98232


 Score = 42.7 bits (99),  Expect = 1.4, Method: Compositional matrix adjust.
 Identities = 18/23 (78%), Positives = 22/23 (95%), Gaps = 0/23 (0%)
 Frame = +2

Query  970     RLAEMENSNGSYLNDSISPNESI  992
               RLAEMEN NGSY+ND++SPNES+
Sbjct  126248  RLAEMENRNGSYVNDNVSPNESM  126316


>emb|AL645857.11| Mouse DNA sequence from clone RP23-167N2 on chromosome X Contains 
part of the Dmd gene for dystrophin muscular dystrophy, 
complete sequence
Length=137904

 Score =  171 bits (432),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 86/92 (93%), Positives = 87/92 (94%), Gaps = 0/92 (0%)
 Frame = +2

Query  430    ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLK  489
              ELPPEERAQNVTRLLRKQAEEVN EW+KLNL SADWQRKIDE LERLQELQEA DELDLK
Sbjct  39110  ELPPEERAQNVTRLLRKQAEEVNAEWDKLNLRSADWQRKIDEALERLQELQEAADELDLK  39289

Query  490    LRQAEVIKGSWQPVGDLLIDSLQDHLEKVKAL  521
              LRQAEVIKGSWQPVGDLLIDSLQDHLEKVK L
Sbjct  39290  LRQAEVIKGSWQPVGDLLIDSLQDHLEKVKVL  39385


 Score =  111 bits (277),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 52/55 (94%), Positives = 53/55 (96%), Gaps = 0/55 (0%)
 Frame = +1

Query  336   IRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRA  390
              RSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQND+HR 
Sbjct  2998  FRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDIHRV  3162


 Score = 95.5 bits (236),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 46/52 (88%), Positives = 49/52 (94%), Gaps = 0/52 (0%)
 Frame = +3

Query  520    ALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVAV  571
              ALRGEIAPLKENV+ VNDLA QLTTLGIQLSPYNLSTLEDLNTRW+LLQV +
Sbjct  69732  ALRGEIAPLKENVNRVNDLAHQLTTLGIQLSPYNLSTLEDLNTRWRLLQVGM  69887


 Score = 84.3 bits (207),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 40/43 (93%), Positives = 42/43 (97%), Gaps = 0/43 (0%)
 Frame = +3

Query  387    VHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPR  429
              + +AFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPR
Sbjct  38373  ISQAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPR  38501


>gb|AY423026.1| Danio rerio dystrobrevin, beta (DTNB) mRNA, complete cds
Length=3069

 Score =  170 bits (431),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 154/568 (27%), Positives = 256/568 (45%), Gaps = 61/568 (10%)
 Frame = +1

Query  685   MDILQIINCLTTIYDRLEQE--HNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTG  742
             + + ++   LT IY +L +     + ++V     + LN++   +DT   GR+ V S K  
Sbjct  172   ISVARLETILTCIYQQLNKRLPTTHQISVQHNTSLLLNFMATAHDTDAQGRLTVFSVKMM  351

Query  743   IISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPS  802
             +  LC   L DK RY+F Q++ S G  +  +    L +++++P  + E  SFG   ++  
Sbjct  352   LSVLCGGKLVDKLRYIFSQISDSHGAMEMSKFDHFLREALKLPAAVFEGPSFG--YLDHL  525

Query  803   VRSCFQFANNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECP  860
              RSCF     + ++   +FLD +  +P  Q ++WLP++HR+   E   H   C+ C+   
Sbjct  526   ARSCFP---QQKKVMLNMFLDALMSDPPPQCLIWLPLVHRMGNVENVHHPVSCSFCRSDG  696

Query  861   IIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYC---TPTTS-GEDVRDFAKVL  916
             + GFRYR  + FNY +CQ+CF+ G  +  H  H+ M E+    +P    G  +      +
Sbjct  697   MTGFRYRCQQCFNYQLCQNCFWRGHASGNHSNHHEMKEHSSWKSPVKKLGRAISKSLGCV  876

Query  917   KNKFRTKRYFAKHPR-----MGYLPVQTVLEGDNMETPASSPQLSHDDTHSR---IEHYA  968
              ++  +   + ++P         +P + +    NM  PA  P LS   + ++       A
Sbjct  877   PSREPSHPIYPEYPEKPLNLSNIVPPRPI---GNMNEPA--PPLSTGSSPTKRLPTLAAA  1041

Query  969   SRLAEMENSNGSYLNDSISPNESI------DDEHLLIQHYCQSLNQDSPLSQPRSPAQIL  1022
              R+ E      +Y+N   S   ++      D+EH LI  Y   L  D P    R PA   
Sbjct  1042  QRMNEEHALIAAYVNKLQSSPRALDSPVRSDEEHKLIARYASRLATD-PGHTAR-PADFS  1215

Query  1023  ISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRD  1082
                  ++R     ++  LE +NR +  E  RL+ +HE +   P P   +  PT       
Sbjct  1216  YDTNKQQR----ELIMQLENKNREILQEIQRLRVEHE-QACQPTPERVQQNPT-------  1359

Query  1083  AELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPS  1142
               L+AE + LRQ K  LE RM  L++  ++L  QL  L +LL     +A+  G   SSPS
Sbjct  1360  --LLAELRQLRQRKDELEQRMSSLQESRRELMVQLEGLMKLL-----KAQAAG---SSPS  1509

Query  1143  TSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
              +  R   S PM +R   S  + +         PQD+  G+   +++  +  P     N 
Sbjct  1510  HASPR---SMPMPIRSPSSGPAPTYTGHTPTHGPQDSLAGVGGDVQEAFSQGPRRNLRN-  1677

Query  1203  GSLFHMADDLGRAMESLVSVMTDEEGAE  1230
               L   AD +   M SLV  +   E  +
Sbjct  1678  -DLLVAADSITNTMSSLVKELNSAEDGD  1758


>ref|XM_001054726.1| PREDICTED: Rattus norvegicus similar to dystrobrevin alpha isoform 
1 (predicted), transcript variant 10 (RGD1561985_predicted), 
mRNA
Length=3516

 Score =  170 bits (431),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 163/610 (26%), Positives = 277/610 (45%), Gaps = 97/610 (15%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  257   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  436

Query  695   TTIYDRLEQE--HNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +T++ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  437   STMFYQLNKRMPSTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  616

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  617   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  781

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  782   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  961

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFA--K  928
               NY +CQ CF+ G     H   + M EY +        +  AK L N        A  +
Sbjct  962   CHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASSR  1120

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT------HSRIEHYASRLAEMENS-----  977
              P     P Q     +        P  S +DT       S    + +R +  ++S     
Sbjct  1121  EPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEVEQN  1300

Query  978   -----------NGSYLNDSISPNESIDDEHLLI---------------------------  999
                         G  ++ S++  + + DEH+LI                           
Sbjct  1301  KILARAAPAFLKGKGIHYSLNVADRLADEHVLIGLYVNMLRNNPSCMLESSNRLDEEHRL  1480

Query  1000  -QHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADLEEENRNLQAEYDRLK  1055
                Y   L  +S  SQP   RS   +  ++++ +  +  +++A+LE +NR +  E  RL+
Sbjct  1481  IARYAARLAAESSSSQPTQQRSAPDVSFTIDANK--QQRQLIAELENKNREILQEIQRLR  1654

Query  1056  QQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLES  1115
              +HE              PT  ++ ++  L+AE +LLRQ K  LE RM  L++  ++L  
Sbjct  1655  VEHEQAS----------QPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMV  1804

Query  1116  QLHRLRQLL--EQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLL  1173
             QL  L +LL  E+ +   +  G+  SSPS ++ R     PM +R   + ++ +       
Sbjct  1805  QLEGLMKLLKEEELKQGTQGAGSPRSSPSHTISRPI---PMPIRSTSACSTPAYT-----  1960

Query  1174  SPPQDTSTGL  1183
               PQD+ TG+
Sbjct  1961  --PQDSLTGV  1984


>gb|M86899.1|HUMDYST16 H.sapiens dystrophin gene, exon 75
Length=365

 Score =  170 bits (431),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 87/102 (85%), Positives = 89/102 (87%), Gaps = 0/102 (0%)
 Frame = +1

Query  1044  NRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARM  1103
             NRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARM
Sbjct  28    NRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARM  207

Query  1104  QILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSL  1145
             QILEDHNKQLESQLHRLRQLLEQ + E     T +    T L
Sbjct  208   QILEDHNKQLESQLHRLRQLLEQVRREMGFLQTFIFPS*TKL  333


>ref|XM_001089125.1| PREDICTED: Macaca mulatta similar to dystrophin related protein 
2 (LOC700789), partial mRNA
Length=325

 Score =  170 bits (430),  Expect = 5e-39, Method: Composition-based stats.
 Identities = 75/107 (70%), Positives = 90/107 (84%), Gaps = 0/107 (0%)
 Frame = +3

Query  758  LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIE  817
            LF QVA+S   CDQR LG+LLH++IQ+PRQLGEVA+FGGSN+EPSVRSCF+F+  KP IE
Sbjct  3    LFSQVANSGSQCDQRHLGVLLHEAIQVPRQLGEVAAFGGSNVEPSVRSCFRFSTGKPVIE  182

Query  818  AALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGF  864
            A+ FL+W+ LEPQSMVWL VLHRV  AE  KHQ KC+IC++CPI GF
Sbjct  183  ASQFLEWVNLEPQSMVWLAVLHRVTIAEQVKHQTKCSICRQCPIKGF  323


>gb|AC193904.3| Pan troglodytes BAC clone CH251-277B20 from chromosome x, complete 
sequence
Length=146903

 Score =  169 bits (428),  Expect = 9e-39, Method: Compositional matrix adjust.
 Identities = 83/83 (100%), Positives = 83/83 (100%), Gaps = 0/83 (0%)
 Frame = -3

Query  1044   NRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARM  1103
              NRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARM
Sbjct  70176  NRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARM  69997

Query  1104   QILEDHNKQLESQLHRLRQLLEQ  1126
              QILEDHNKQLESQLHRLRQLLEQ
Sbjct  69996  QILEDHNKQLESQLHRLRQLLEQ  69928


 Score =  143 bits (360),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 67/68 (98%), Positives = 68/68 (100%), Gaps = 0/68 (0%)
 Frame = -2

Query  661     LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
               +DLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  132121  VDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  131942

Query  721     WLLNVYDT  728
               WLLNVYDT
Sbjct  131941  WLLNVYDT  131918


 Score =  132 bits (331),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 62/74 (83%), Positives = 63/74 (85%), Gaps = 0/74 (0%)
 Frame = -3

Query  793     SFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAK  852
               SF  S   PS+      ANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAK
Sbjct  105534  SFLSSFCPPSLSLLSLQANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAK  105355

Query  853     CNICKECPIIGFRY  866
               CNICKECPIIGFRY
Sbjct  105354  CNICKECPIIGFRY  105313


 Score =  115 bits (288),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 53/58 (91%), Positives = 54/58 (93%), Gaps = 0/58 (0%)
 Frame = -1

Query  758     LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPE  815
               LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQF +  P 
Sbjct  126551  LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFVSYSPS  126378


 Score =  107 bits (268),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 54/55 (98%), Positives = 54/55 (98%), Gaps = 0/55 (0%)
 Frame = -3

Query  991    SIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  1045
              S DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR
Sbjct  92283  SRDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  92119


 Score =  102 bits (253),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 48/61 (78%), Positives = 53/61 (86%), Gaps = 5/61 (8%)
 Frame = -3

Query  893     HYPMVEYCTP-----TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME  947
               ++P++   +P     TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME
Sbjct  101427  NHPVLNLISP*SPF*TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME  101248

Query  948     T  948
               T
Sbjct  101247  T  101245


 Score = 92.8 bits (229),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 38/40 (95%), Positives = 39/40 (97%), Gaps = 0/40 (0%)
 Frame = -2

Query  865     RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTT  904
               RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTP +
Sbjct  103060  RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPVS  102941


 Score = 85.5 bits (210),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 42/43 (97%), Positives = 43/43 (100%), Gaps = 0/43 (0%)
 Frame = -3

Query  1127   PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGE  1169
              PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMG+
Sbjct  69069  PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGK  68941


 Score = 70.1 bits (170),  Expect = 8e-09, Method: Compositional matrix adjust.
 Identities = 34/37 (91%), Positives = 34/37 (91%), Gaps = 3/37 (8%)
 Frame = -1

Query  1194   FPSSRGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
              FP   GHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  44657  FP---GHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  44556


 Score = 68.6 bits (166),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 32/32 (100%), Positives = 32/32 (100%), Gaps = 0/32 (0%)
 Frame = -3

Query  1168   GEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG  1199
              GEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG
Sbjct  56856  GEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG  56761


 Score = 63.5 bits (153),  Expect = 6e-07, Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 32/34 (94%), Gaps = 0/34 (0%)
 Frame = -3

Query  723     LNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYR  756
               L +++ GRTGRIRVLSFKTGIISLCKAHLEDKYR
Sbjct  129108  LILHNRGRTGRIRVLSFKTGIISLCKAHLEDKYR  129007


 Score = 54.3 bits (129),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 25/25 (100%), Positives = 25/25 (100%), Gaps = 0/25 (0%)
 Frame = -2

Query  636     ADLNNVRFSAYRTAMKLRRLQKALC  660
               ADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  145489  ADLNNVRFSAYRTAMKLRRLQKALC  145415


 Score = 52.8 bits (125),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 28/32 (87%), Gaps = 0/32 (0%)
 Frame = -1

Query  970    RLAEMENSNGSYLNDSISPNESIDDEHLLIQH  1001
              RLAEMENSNGSYLNDSISPNES+   HL +Q+
Sbjct  95084  RLAEMENSNGSYLNDSISPNESM*VSHLFLQN  94989


 Score = 48.9 bits (115),  Expect = 0.019, Method: Compositional matrix adjust.
 Identities = 22/23 (95%), Positives = 22/23 (95%), Gaps = 0/23 (0%)
 Frame = -1

Query  949    PASSPQLSHDDTHSRIEHYASRL  971
              PASSPQLSHDDTHSRIEHYASR 
Sbjct  96269  PASSPQLSHDDTHSRIEHYASRY  96201


>emb|CT573323.2| CH251-58D24, complete sequence
Length=66462

 Score =  169 bits (428),  Expect = 9e-39, Method: Compositional matrix adjust.
 Identities = 83/83 (100%), Positives = 83/83 (100%), Gaps = 0/83 (0%)
 Frame = +3

Query  1044   NRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARM  1103
              NRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARM
Sbjct  41238  NRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARM  41417

Query  1104   QILEDHNKQLESQLHRLRQLLEQ  1126
              QILEDHNKQLESQLHRLRQLLEQ
Sbjct  41418  QILEDHNKQLESQLHRLRQLLEQ  41486


 Score =  132 bits (331),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 62/74 (83%), Positives = 63/74 (85%), Gaps = 0/74 (0%)
 Frame = +1

Query  793   SFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAK  852
             SF  S   PS+      ANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAK
Sbjct  5881  SFLSSFCPPSLSLLSLQANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAK  6060

Query  853   CNICKECPIIGFRY  866
             CNICKECPIIGFRY
Sbjct  6061  CNICKECPIIGFRY  6102


 Score =  107 bits (268),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 54/55 (98%), Positives = 54/55 (98%), Gaps = 0/55 (0%)
 Frame = +3

Query  991    SIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  1045
              S DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR
Sbjct  19131  SRDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  19295


 Score =  102 bits (253),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 48/61 (78%), Positives = 53/61 (86%), Gaps = 5/61 (8%)
 Frame = +1

Query  893    HYPMVEYCTP-----TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME  947
              ++P++   +P     TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME
Sbjct  9988   NHPVLNLISP*SPF*TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME  10167

Query  948    T  948
              T
Sbjct  10168  T  10170


 Score = 92.8 bits (229),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 38/40 (95%), Positives = 39/40 (97%), Gaps = 0/40 (0%)
 Frame = +3

Query  865   RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTT  904
             RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTP +
Sbjct  8355  RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPVS  8474


 Score = 85.5 bits (210),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 42/43 (97%), Positives = 43/43 (100%), Gaps = 0/43 (0%)
 Frame = +3

Query  1127   PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGE  1169
              PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMG+
Sbjct  42345  PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGK  42473


 Score = 68.6 bits (166),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 32/32 (100%), Positives = 32/32 (100%), Gaps = 0/32 (0%)
 Frame = +2

Query  1168   GEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG  1199
              GEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG
Sbjct  54560  GEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG  54655


 Score = 52.8 bits (125),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 28/32 (87%), Gaps = 0/32 (0%)
 Frame = +2

Query  970    RLAEMENSNGSYLNDSISPNESIDDEHLLIQH  1001
              RLAEMENSNGSYLNDSISPNES+   HL +Q+
Sbjct  16331  RLAEMENSNGSYLNDSISPNESM*VSHLFLQN  16426


 Score = 48.9 bits (115),  Expect = 0.019, Method: Compositional matrix adjust.
 Identities = 22/23 (95%), Positives = 22/23 (95%), Gaps = 0/23 (0%)
 Frame = +2

Query  949    PASSPQLSHDDTHSRIEHYASRL  971
              PASSPQLSHDDTHSRIEHYASR 
Sbjct  15146  PASSPQLSHDDTHSRIEHYASRY  15214


>gb|AC078958.30| Homo sapiens X BAC RP11-609C15 (Roswell Park Cancer Institute 
Human BAC Library) complete sequence
Length=187547

 Score =  169 bits (428),  Expect = 9e-39, Method: Compositional matrix adjust.
 Identities = 83/83 (100%), Positives = 83/83 (100%), Gaps = 0/83 (0%)
 Frame = -2

Query  1044   NRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARM  1103
              NRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARM
Sbjct  19936  NRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARM  19757

Query  1104   QILEDHNKQLESQLHRLRQLLEQ  1126
              QILEDHNKQLESQLHRLRQLLEQ
Sbjct  19756  QILEDHNKQLESQLHRLRQLLEQ  19688


 Score =  142 bits (357),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 67/68 (98%), Positives = 68/68 (100%), Gaps = 0/68 (0%)
 Frame = -3

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              +DLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  82113  VDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  81934

Query  721    WLLNVYDT  728
              WLLNVYDT
Sbjct  81933  WLLNVYDT  81910


 Score =  130 bits (327),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 65/90 (72%), Positives = 69/90 (76%), Gaps = 6/90 (6%)
 Frame = -3

Query  777    LLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLP  836
              L++ S  I      + SF  S   PS+      ANNKPEIEAALFLDWMRLEPQSMVWLP
Sbjct  55398  LIYTSFAI------LPSFLSSFCPPSLSLLSLQANNKPEIEAALFLDWMRLEPQSMVWLP  55237

Query  837    VLHRVAAAETAKHQAKCNICKECPIIGFRY  866
              VLHRVAAAETAKHQAKCNICKECPIIGFRY
Sbjct  55236  VLHRVAAAETAKHQAKCNICKECPIIGFRY  55147


 Score =  115 bits (288),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 53/58 (91%), Positives = 54/58 (93%), Gaps = 0/58 (0%)
 Frame = -1

Query  758    LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPE  815
              LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQF +  P 
Sbjct  76529  LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFVSYSPS  76356


 Score =  107 bits (268),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 54/55 (98%), Positives = 54/55 (98%), Gaps = 0/55 (0%)
 Frame = -2

Query  991    SIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  1045
              S DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR
Sbjct  42019  SRDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  41855


 Score =  102 bits (253),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 48/61 (78%), Positives = 53/61 (86%), Gaps = 5/61 (8%)
 Frame = -1

Query  893    HYPMVEYCTP-----TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME  947
              ++P++   +P     TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME
Sbjct  51263  NHPVLNLISP*SPF*TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME  51084

Query  948    T  948
              T
Sbjct  51083  T  51081


 Score = 92.8 bits (229),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 38/40 (95%), Positives = 39/40 (97%), Gaps = 0/40 (0%)
 Frame = -3

Query  865    RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTT  904
              RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTP +
Sbjct  52896  RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPVS  52777


 Score = 85.5 bits (210),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 42/43 (97%), Positives = 43/43 (100%), Gaps = 0/43 (0%)
 Frame = -1

Query  1127   PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGE  1169
              PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMG+
Sbjct  18827  PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGK  18699


 Score = 68.6 bits (166),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 32/32 (100%), Positives = 32/32 (100%), Gaps = 0/32 (0%)
 Frame = -1

Query  1168  GEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG  1199
             GEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG
Sbjct  6608  GEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG  6513


 Score = 63.5 bits (153),  Expect = 6e-07, Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 32/34 (94%), Gaps = 0/34 (0%)
 Frame = -1

Query  723    LNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYR  756
              L +++ GRTGRIRVLSFKTGIISLCKAHLEDKYR
Sbjct  79097  LILHNRGRTGRIRVLSFKTGIISLCKAHLEDKYR  78996


 Score = 54.3 bits (129),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 25/25 (100%), Positives = 25/25 (100%), Gaps = 0/25 (0%)
 Frame = -3

Query  636    ADLNNVRFSAYRTAMKLRRLQKALC  660
              ADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  95535  ADLNNVRFSAYRTAMKLRRLQKALC  95461


 Score = 52.8 bits (125),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 28/32 (87%), Gaps = 0/32 (0%)
 Frame = -1

Query  970    RLAEMENSNGSYLNDSISPNESIDDEHLLIQH  1001
              RLAEMENSNGSYLNDSISPNES+   HL +Q+
Sbjct  44828  RLAEMENSNGSYLNDSISPNESM*VSHLFLQN  44733


 Score = 50.8 bits (120),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 26/35 (74%), Gaps = 3/35 (8%)
 Frame = -3

Query  605     ISPNKVPYYI---NHETQTTCWDHPKMTELYQSLA  636
               I   KV  Y+   +HETQTTCWDHPKMTELYQSL 
Sbjct  133470  IVNAKVFLYVLCFSHETQTTCWDHPKMTELYQSLG  133366


 Score = 48.9 bits (115),  Expect = 0.019, Method: Compositional matrix adjust.
 Identities = 22/23 (95%), Positives = 22/23 (95%), Gaps = 0/23 (0%)
 Frame = -1

Query  949    PASSPQLSHDDTHSRIEHYASRL  971
              PASSPQLSHDDTHSRIEHYASR 
Sbjct  46016  PASSPQLSHDDTHSRIEHYASRY  45948


>emb|CT573090.2| RP43-052E01, complete sequence
Length=161118

 Score =  169 bits (428),  Expect = 9e-39, Method: Compositional matrix adjust.
 Identities = 83/83 (100%), Positives = 83/83 (100%), Gaps = 0/83 (0%)
 Frame = +3

Query  1044   NRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARM  1103
              NRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARM
Sbjct  61539  NRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARM  61718

Query  1104   QILEDHNKQLESQLHRLRQLLEQ  1126
              QILEDHNKQLESQLHRLRQLLEQ
Sbjct  61719  QILEDHNKQLESQLHRLRQLLEQ  61787


 Score =  132 bits (331),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 62/74 (83%), Positives = 63/74 (85%), Gaps = 0/74 (0%)
 Frame = +3

Query  793    SFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAK  852
              SF  S   PS+      ANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAK
Sbjct  26127  SFLSSFCPPSLSLLSLQANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAK  26306

Query  853    CNICKECPIIGFRY  866
              CNICKECPIIGFRY
Sbjct  26307  CNICKECPIIGFRY  26348


 Score =  115 bits (288),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 53/58 (91%), Positives = 54/58 (93%), Gaps = 0/58 (0%)
 Frame = +3

Query  758   LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPE  815
             LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQF +  P 
Sbjct  5070  LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFVSYSPS  5243


 Score =  107 bits (268),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 54/55 (98%), Positives = 54/55 (98%), Gaps = 0/55 (0%)
 Frame = +3

Query  991    SIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  1045
              S DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR
Sbjct  39447  SRDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  39611


 Score =  102 bits (253),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 48/61 (78%), Positives = 53/61 (86%), Gaps = 5/61 (8%)
 Frame = +3

Query  893    HYPMVEYCTP-----TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME  947
              ++P++   +P     TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME
Sbjct  30234  NHPVLNLISP*SPF*TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME  30413

Query  948    T  948
              T
Sbjct  30414  T  30416


 Score = 92.8 bits (229),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 38/40 (95%), Positives = 39/40 (97%), Gaps = 0/40 (0%)
 Frame = +2

Query  865    RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTT  904
              RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTP +
Sbjct  28601  RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPVS  28720


 Score = 85.5 bits (210),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 42/43 (97%), Positives = 43/43 (100%), Gaps = 0/43 (0%)
 Frame = +3

Query  1127   PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGE  1169
              PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMG+
Sbjct  62646  PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGK  62774


 Score = 70.1 bits (170),  Expect = 8e-09, Method: Compositional matrix adjust.
 Identities = 34/37 (91%), Positives = 34/37 (91%), Gaps = 3/37 (8%)
 Frame = +1

Query  1194   FPSSRGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
              FP   GHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  87091  FP---GHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  87192


 Score = 68.6 bits (166),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 32/32 (100%), Positives = 32/32 (100%), Gaps = 0/32 (0%)
 Frame = +2

Query  1168   GEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG  1199
              GEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG
Sbjct  74852  GEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG  74947


 Score = 63.5 bits (153),  Expect = 6e-07, Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 32/34 (94%), Gaps = 0/34 (0%)
 Frame = +1

Query  723   LNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYR  756
             L +++ GRTGRIRVLSFKTGIISLCKAHLEDKYR
Sbjct  2509  LILHNRGRTGRIRVLSFKTGIISLCKAHLEDKYR  2610


 Score = 52.8 bits (125),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 28/32 (87%), Gaps = 0/32 (0%)
 Frame = +1

Query  970    RLAEMENSNGSYLNDSISPNESIDDEHLLIQH  1001
              RLAEMENSNGSYLNDSISPNES+   HL +Q+
Sbjct  36646  RLAEMENSNGSYLNDSISPNESM*VSHLFLQN  36741


 Score = 48.9 bits (115),  Expect = 0.019, Method: Compositional matrix adjust.
 Identities = 22/23 (95%), Positives = 22/23 (95%), Gaps = 0/23 (0%)
 Frame = +2

Query  949    PASSPQLSHDDTHSRIEHYASRL  971
              PASSPQLSHDDTHSRIEHYASR 
Sbjct  35465  PASSPQLSHDDTHSRIEHYASRY  35533


>emb|AL645477.8| Mouse DNA sequence from clone RP23-155L18 on chromosome X Contains 
the 3' end of the Dmd gene for dystrophin muscular dystrophy, 
a novel pseudogene similar to family with sequence similarity 
112 member A FAM112A (Homo sapiens), a ribosomal protein 
S6 (Rps6) pseudogene and the gene for a novel protein 
similar to ferritin, heavy polypeptide 1 FTH1 (Homo sapiens), 
complete sequence
Length=189131

 Score =  168 bits (426),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%), Gaps = 0/82 (0%)
 Frame = +3

Query  1045   RNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQ  1104
              RNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQ
Sbjct  89193  RNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQ  89372

Query  1105   ILEDHNKQLESQLHRLRQLLEQ  1126
              ILEDHNKQLESQLHRLRQLLEQ
Sbjct  89373  ILEDHNKQLESQLHRLRQLLEQ  89438


 Score =  144 bits (364),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 67/68 (98%), Positives = 68/68 (100%), Gaps = 0/68 (0%)
 Frame = +2

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              +DLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  16634  VDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  16813

Query  721    WLLNVYDT  728
              WLLNVYDT
Sbjct  16814  WLLNVYDT  16837


 Score =  128 bits (321),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 58/60 (96%), Positives = 58/60 (96%), Gaps = 0/60 (0%)
 Frame = +2

Query  807    FQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRY  866
              F  ANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRY
Sbjct  50810  FSQANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRY  50989


 Score =  113 bits (282),  Expect = 7e-22, Method: Compositional matrix adjust.
 Identities = 52/54 (96%), Positives = 53/54 (98%), Gaps = 0/54 (0%)
 Frame = +1

Query  758    LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN  811
              LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQF +
Sbjct  21436  LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFVS  21597


 Score =  107 bits (268),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 54/55 (98%), Positives = 54/55 (98%), Gaps = 0/55 (0%)
 Frame = +1

Query  991    SIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  1045
              S DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR
Sbjct  64513  SRDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  64677


 Score =  101 bits (252),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 46/46 (100%), Positives = 46/46 (100%), Gaps = 0/46 (0%)
 Frame = +2

Query  903    TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET  948
              TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET
Sbjct  55520  TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET  55657


 Score = 93.2 bits (230),  Expect = 9e-16, Method: Compositional matrix adjust.
 Identities = 39/43 (90%), Positives = 40/43 (93%), Gaps = 0/43 (0%)
 Frame = +1

Query  862    IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTT  904
              I  RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTP +
Sbjct  53206  IFIRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPVS  53334


 Score = 83.6 bits (205),  Expect = 7e-13, Method: Compositional matrix adjust.
 Identities = 41/43 (95%), Positives = 43/43 (100%), Gaps = 0/43 (0%)
 Frame = +1

Query  1127   PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGE  1169
              PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTS+SMG+
Sbjct  90190  PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSESMGK  90318


 Score = 70.5 bits (171),  Expect = 6e-09, Method: Compositional matrix adjust.
 Identities = 35/41 (85%), Positives = 36/41 (87%), Gaps = 3/41 (7%)
 Frame = +3

Query  1190    LNNSFPSSRGHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
               L+  FP   GHNVGSLFHMADDLGRAMESLVSVMTDEEGAE
Sbjct  113943  LSLCFP---GHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  114056


 Score = 69.7 bits (169),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 32/35 (91%), Positives = 34/35 (97%), Gaps = 0/35 (0%)
 Frame = +1

Query  1168    GEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNV  1202
               GEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG ++
Sbjct  102100  GEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGKDL  102204


 Score = 63.5 bits (153),  Expect = 7e-07, Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 32/34 (94%), Gaps = 0/34 (0%)
 Frame = +1

Query  723    LNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYR  756
              L +++ GRTGRIRVLSFKTGIISLCKAHLEDKYR
Sbjct  19054  LLLHNRGRTGRIRVLSFKTGIISLCKAHLEDKYR  19155


 Score = 54.7 bits (130),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 25/25 (100%), Positives = 25/25 (100%), Gaps = 0/25 (0%)
 Frame = +2

Query  636   ADLNNVRFSAYRTAMKLRRLQKALC  660
             ADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  1307  ADLNNVRFSAYRTAMKLRRLQKALC  1381


 Score = 51.6 bits (122),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 28/32 (87%), Gaps = 0/32 (0%)
 Frame = +1

Query  970    RLAEMENSNGSYLNDSISPNESIDDEHLLIQH  1001
              RLAEMENSNGSYLNDSISPNES+   HL +Q+
Sbjct  61702  RLAEMENSNGSYLNDSISPNESM*VWHLFLQN  61797


 Score = 48.9 bits (115),  Expect = 0.019, Method: Compositional matrix adjust.
 Identities = 22/23 (95%), Positives = 22/23 (95%), Gaps = 0/23 (0%)
 Frame = +1

Query  949    PASSPQLSHDDTHSRIEHYASRL  971
              PASSPQLSHDDTHSRIEHYASR 
Sbjct  60622  PASSPQLSHDDTHSRIEHYASRY  60690


>ref|XM_001361515.2| Drosophila pseudoobscura pseudoobscura GA21140 (Dpse\GA21140), 
mRNA
Length=2445

 Score =  167 bits (422),  Expect = 5e-38, Method: Compositional matrix adjust.
 Identities = 144/542 (26%), Positives = 240/542 (44%), Gaps = 63/542 (11%)
 Frame = +1

Query  635   LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIIN  692
             L   +++RF++YRTA KLR +QK+  L L+ +    +A  ++ L   +    + + ++  
Sbjct  43    LQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSEVSVARLET  222

Query  693   CLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
              ++++Y  L +       VP+     + LNWLL  Y +  +G+IRV S K  + ++C   
Sbjct  223   LVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAYTSDNSGKIRVFSIKVALATMCSGK  402

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             L DK RY+F Q++   G     +LG  L + + +P  + E  +F   + +  +      A
Sbjct  403   LVDKLRYIFSQISDGAGQLVAWKLGEFLREVLALPAAVYESPTF---HYKEGLEEEIFPA  573

Query  811   NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
              NK  +   +        P  +VWLP+LHR+A  ET  H   C++C +    GFRYR  +
Sbjct  574   ENKVTVNDFMATLMSEPGPSCLVWLPLLHRLATVETIVHPTICSVCHKENFTGFRYRCQR  753

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRT--KRYFAK  928
                Y +CQ CF+ G+ +  H+  + + EY +  +  + +      L+  FR   ++    
Sbjct  754   CHAYQLCQECFWHGKTSLNHQNDHEVKEYSSYKSPSKQI---GHSLRKSFRCVPEKTTQV  924

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLSH----DDTHSRIEHYASRLAEMENSNGSYLND  984
              PR    P +T L   ++  P  SP  SH    D T +    +   L        S L D
Sbjct  925   LPRFPDQPEKT-LNLSHIVPP--SPLPSHNGFNDPTLALAGVHHGHLPPGIFDRSSTL-D  1092

Query  985   SISPNESI-------------------------DDEHLLIQHYCQSLNQDSPLSQPRSPA  1019
             S +   SI                         D+EH LI  Y   L Q++    P + +
Sbjct  1093  SRATGRSIDSANCTGGGGGGGTTISRLAAASANDEEHRLIARYAARLAQEN--RAPSNMS  1266

Query  1020  QILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQS  1079
             +    + ++       ++A LE +N+ +  E  RL++Q E               T   +
Sbjct  1267  ESATPIGTDNSRAQRELIAQLESKNKEIMREIARLRRQQE---------------TEQMA  1401

Query  1080  PRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVS  1139
             P +  LI E + LRQ KG LE  +  L+D  +QL  QL  L ++L+  Q  A    T  S
Sbjct  1402  PENPALINELRALRQRKGELEGHLGALQDSRRQLMEQLEGLMRMLKN-QQTASPRSTPNS  1578

Query  1140  SP  1141
             SP
Sbjct  1579  SP  1584


>ref|XM_001502889.1| PREDICTED: Equus caballus dystrobrevin, beta (DTNB), mRNA
Length=2219

 Score =  166 bits (421),  Expect = 6e-38, Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 232/502 (46%), Gaps = 80/502 (15%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  76    NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  255

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  256   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  429

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  430   MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  597

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  598   -QQKKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  774

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEY-------------------CTPTT-----  904
              +  NY +CQ+CF+ G  +  H   + M E+                   C PT      
Sbjct  775   QQCHNYQLCQNCFWRGHASGPHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPTREPPHP  954

Query  905   ----SGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHD--  958
                   E   D A ++  +  T         M    V  +  G  + TP    Q S D  
Sbjct  955   VFPEQPEKPLDLANIVPPRPLTN--------MNDTMVSHMSSG--VPTPTKRLQYSQDRP  1104

Query  959   ----DTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQ  1014
                 D H+ I  Y +RL      + + + DS S    +D+EH LI  Y   L  ++  + 
Sbjct  1105  RHLADEHALIASYVARL-----QHCARVLDSPS---RLDEEHRLIARYAARLAAEAG-NM  1257

Query  1015  PRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMP  1074
              R P  +  + ++ +  +  +++A+LE +NR +  E  RL+ +HE              P
Sbjct  1258  TRPPTDLSFNFDANK--QQRQLIAELENKNREILQEIQRLRLEHEQAS----------QP  1401

Query  1075  TSPQSPRDAELIAEAKLLRQHK  1096
             T  ++ ++  L+AE +LLRQ K
Sbjct  1402  TPEKAQQNPTLLAELRLLRQRK  1467


>ref|XM_540111.2| PREDICTED: Canis familiaris similar to dystrobrevin, beta isoform 
1 (LOC482997), mRNA
Length=2013

 Score =  166 bits (419),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 135/502 (26%), Positives = 229/502 (45%), Gaps = 80/502 (15%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  76    NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHSTEISVSRLETVI  255

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             +++Y     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  256   SSLYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  429

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  430   MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  597

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  598   -QQKKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  774

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEY-------------------CTPTT-----  904
              +  NY +CQ+CF+ G  +  H   + M E+                   C PT      
Sbjct  775   QQCHNYQLCQNCFWRGHASGPHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPTREPPHP  954

Query  905   ----SGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHD--  958
                   E   D A ++  +          P               + TP    Q S D  
Sbjct  955   VFPEQPEKPLDLANIVPPR----------PLANMNDTMVSHMSSGVPTPTKRLQYSQDIP  1104

Query  959   ----DTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQ  1014
                 D H+ I  Y +RL      + + + DS S    +D+EH LI  Y   L  ++  + 
Sbjct  1105  SHLADEHALIASYVARL-----QHCARVLDSPS---RLDEEHRLIARYAARLAAEAG-NM  1257

Query  1015  PRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMP  1074
              R PA +  + ++ +  +  +++A+LE +NR +  E  RL+ +HE              P
Sbjct  1258  TRPPADLSFNFDANK--QQRQLIAELENKNREILQEIQRLRLEHEQAS----------QP  1401

Query  1075  TSPQSPRDAELIAEAKLLRQHK  1096
             T  ++ ++  L+AE +LLRQ K
Sbjct  1402  TPEKAQQNPTLLAELRLLRQRK  1467


>emb|AJ003007.1| Mus musculus mRNA for beta-dystrobrevin
Length=2428

 Score =  166 bits (419),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 237/493 (48%), Gaps = 62/493 (12%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  202   NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHSTEISVSRLETVI  381

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  382   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMVAAYDSEGRGKLTVFSVKAMLATMCGGK  555

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +L   L +++++P  + E  SFG +  E +VR+CF   
Sbjct  556   MLDKLRYIFSQMSDSNGLMMFGKLDQFLKEALKLPTAVFEGPSFGYT--EHAVRTCFP--  723

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C    ++GFRYR 
Sbjct  724   -QQKKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCHCESMMGFRYRC  900

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGED----VRDFAKVLKNKFRTKR  924
              +  NY +CQ+CF+ G  +  H   + M E+ +  +  +     +      + ++     
Sbjct  901   QQCHNYQLCQNCFWRGHASGAHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPSREPPHP  1080

Query  925   YFAKHPR----MGYL----PVQ----TVLE--GDNMETPASSPQLSHD------DTHSRI  964
              F + P     + +L    P+     TV+      + TP    Q S D      D H+ I
Sbjct  1081  VFPEQPEKPLDLAHLVPPRPLTNMNDTVVSHMSSGVPTPTKRLQYSQDMPNLLADEHALI  1260

Query  965   EHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSP-LSQPRSPAQILI  1023
               Y +RL      + + + DS S    +D+EH LI  Y   L  ++  +++P + A    
Sbjct  1261  ASYVARL-----QHCTRVLDSPS---RLDEEHRLIARYAARLAAEAGNMTRPPTDASFNF  1416

Query  1024  SLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDA  1083
                 ++R    +++A+LE +NR +  E  RL+ +HE              PT  ++ ++ 
Sbjct  1417  DANKQQR----QLIAELENKNREILQEIQRLRLEHEQA----------FQPTPEKAQQNP  1554

Query  1084  ELIAEAKLLRQHK  1096
              L+AE +LLRQ K
Sbjct  1555  MLLAELRLLRQRK  1593


>ref|NM_001391.5| Homo sapiens dystrobrevin, alpha (DTNA), transcript variant 3, 
mRNA
Length=4374

 Score =  165 bits (418),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 155/563 (27%), Positives = 258/563 (45%), Gaps = 90/563 (15%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQH---NLKQNDQPMDILQIINC  693
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++   NL  N + +++ ++   
Sbjct  77    DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTE-LNVSRLEAV  253

Query  694   LTTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHL  751
             L+TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   +
Sbjct  254   LSTIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKI  433

Query  752   EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN  811
              DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   +
Sbjct  434   MDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---S  598

Query  812   NKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  869
              + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  
Sbjct  599   QQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQ  778

Query  870   KHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAK-  928
             +  NY +CQ CF+ G     H   + M EY +        +  AK L N        A  
Sbjct  779   QCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------WKSPAKKLTNALSKSLSCASS  937

Query  929   ----HPRMGYLPVQTVLEGDNMETPASSPQLSHDDT------HSRIEHYASRLAEMENS-  977
                 HP     P + +     ++T    P  S +DT       S    + +R +  ++S 
Sbjct  938   REPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSE  1117

Query  978   ---------------NGSYLNDSISPNESIDDEHL-------------------------  997
                             G  +  S++  + + DEH+                         
Sbjct  1118  VEQNKLLARAAPAFLKGKGIQYSLNVADRLADEHVLIGLYVNMLRNNPSCMLESSNRLDE  1297

Query  998   ---LIQHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADLEEENRNLQAEY  1051
                LI  Y   L  +S  SQP   RS   I  ++++ +  +  +++A+LE +NR +  E 
Sbjct  1298  EHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANK--QQRQLIAELENKNREILQEI  1471

Query  1052  DRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNK  1111
              RL+ +HE     P P   +  PT         L+AE +LLRQ K  LE RM  L++  +
Sbjct  1472  QRLRLEHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELEQRMSALQESRR  1621

Query  1112  QLESQLHRLRQLLEQPQAEAKVN  1134
             +L  QL  L +LL++ + +  V+
Sbjct  1622  ELMVQLEGLMKLLKEEELKQGVS  1690


>dbj|AK043436.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length 
enriched library, clone:A730095I17 product:dystrobrevin, beta, 
full insert sequence
Length=2359

 Score =  165 bits (418),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 237/493 (48%), Gaps = 62/493 (12%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  292   NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHSTEISVSRLETVI  471

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  472   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMVAAYDSEGRGKLTVFSVKAMLATMCGGK  645

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +L   L +++++P  + E  SFG +  E +VR+CF   
Sbjct  646   MLDKLRYIFSQMSDSNGLMMFGKLDQFLKEALKLPTAVFEGPSFGYT--EHAVRTCFP--  813

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C    ++GFRYR 
Sbjct  814   -QQKKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCHCESMMGFRYRC  990

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGED----VRDFAKVLKNKFRTKR  924
              +  NY +CQ+CF+ G  +  H   + M E+ +  +  +     +      + ++     
Sbjct  991   QQCHNYQLCQNCFWRGHASGAHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPSREPPHP  1170

Query  925   YFAKHPR----MGYL----PVQ----TVLE--GDNMETPASSPQLSHD------DTHSRI  964
              F + P     + +L    P+     TV+      + TP    Q S D      D H+ I
Sbjct  1171  VFPEQPEKPLDLAHLVPPRPLTNMNDTVVSHMSSGVPTPTKRLQYSQDMPNLLADEHALI  1350

Query  965   EHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSP-LSQPRSPAQILI  1023
               Y +RL      + + + DS S    +D+EH LI  Y   L  ++  +++P + A    
Sbjct  1351  ASYVARL-----QHCTRVLDSPS---RLDEEHRLIARYAARLAAEAGNMTRPPTDASFNF  1506

Query  1024  SLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDA  1083
                 ++R    +++A+LE +NR +  E  RL+ +HE              PT  ++ ++ 
Sbjct  1507  DANKQQR----QLIAELENKNREILQEIQRLRLEHEQAS----------QPTPEKAQQNP  1644

Query  1084  ELIAEAKLLRQHK  1096
              L+AE +LLRQ K
Sbjct  1645  MLLAELRLLRQRK  1683


>gb|BC030924.1| Mus musculus dystrobrevin, beta, mRNA (cDNA clone MGC:31669 IMAGE:4910166), 
complete cds
Length=2329

 Score =  165 bits (417),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 237/493 (48%), Gaps = 62/493 (12%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  269   NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHSTEISVSRLETVI  448

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  449   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMVAAYDSEGRGKLTVFSVKAMLATMCGGK  622

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +L   L +++++P  + E  SFG +  E +VR+CF   
Sbjct  623   MLDKLRYIFSQMSDSNGLMMFGKLDQFLKEALKLPTAVFEGPSFGYT--EHAVRTCFP--  790

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C    ++GFRYR 
Sbjct  791   -QQKKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCHCESMMGFRYRC  967

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGED----VRDFAKVLKNKFRTKR  924
              +  NY +CQ+CF+ G  +  H   + M E+ +  +  +     +      + ++     
Sbjct  968   QQCHNYQLCQNCFWRGHASGAHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPSREPPHP  1147

Query  925   YFAKHPR----MGYL----PVQ----TVLE--GDNMETPASSPQLSHD------DTHSRI  964
              F + P     + +L    P+     TV+      + TP    Q S D      D H+ I
Sbjct  1148  VFPEQPEKPLDLAHLVPPRPLTNMNDTVVSHMSSGVPTPTKRLQYSQDMPNLLADEHALI  1327

Query  965   EHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSP-LSQPRSPAQILI  1023
               Y +RL      + + + DS S    +D+EH LI  Y   L  ++  +++P + A    
Sbjct  1328  ASYVARL-----QHCTRVLDSPS---RLDEEHRLIARYAARLAAEAGNMTRPPTDASFNF  1483

Query  1024  SLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDA  1083
                 ++R    +++A+LE +NR +  E  RL+ +HE              PT  ++ ++ 
Sbjct  1484  DANKQQR----QLIAELENKNREILQEIQRLRLEHEQAS----------QPTPEKAQQNP  1621

Query  1084  ELIAEAKLLRQHK  1096
              L+AE +LLRQ K
Sbjct  1622  MLLAELRLLRQRK  1660


>gb|DQ160290.1| Homo sapiens dystrobrevin beta isoform 6 (DTNB) mRNA, complete 
cds
Length=1809

 Score =  164 bits (416),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 231/502 (46%), Gaps = 80/502 (15%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  76    NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  255

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  256   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  429

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  430   MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  597

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  598   -QQRKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  774

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEY-------------------CTPTT-----  904
              +  NY +CQ+CF+ G     H   + M E+                   C PT      
Sbjct  775   QQCHNYQLCQNCFWRGHAGGPHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPTREPPHP  954

Query  905   ----SGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHD--  958
                   E   D A ++  +  T         M    V  +  G  + TP    Q S D  
Sbjct  955   VFPEQPEKPLDLAHIVPPRPLTN--------MNDTMVSHMSSG--VPTPTKRLQYSQDIP  1104

Query  959   ----DTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQ  1014
                 D H+ I  Y +RL      + + + DS S    +D+EH LI  Y   L  ++  + 
Sbjct  1105  SHLADEHALIASYVARL-----QHCARVLDSPS---RLDEEHRLIARYAARLAAEAG-NV  1257

Query  1015  PRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMP  1074
              R P  +  + ++ +  +  +++A+LE +NR +  E  RL+ +HE              P
Sbjct  1258  TRPPTDLSFNFDANK--QQRQLIAELENKNREILQEIQRLRLEHEQAS----------QP  1401

Query  1075  TSPQSPRDAELIAEAKLLRQHK  1096
             T  ++ ++  L+AE +LLRQ K
Sbjct  1402  TPEKAQQNPTLLAELRLLRQRK  1467


>emb|Y15718.1| Homo sapiens mRNA for dystrobrevin B DTN-B2
Length=2573

 Score =  164 bits (416),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 231/502 (46%), Gaps = 80/502 (15%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  76    NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  255

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  256   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  429

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  430   MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  597

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  598   -QQRKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  774

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEY-------------------CTPTT-----  904
              +  NY +CQ+CF+ G     H   + M E+                   C PT      
Sbjct  775   QQCHNYQLCQNCFWRGHAGGPHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPTREPPHP  954

Query  905   ----SGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHD--  958
                   E   D A ++  +  T         M    V  +  G  + TP    Q S D  
Sbjct  955   VFPEQPEKPLDLAHIVPPRPLTN--------MNDTMVSHMSSG--VPTPTKRLQYSQDIP  1104

Query  959   ----DTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQ  1014
                 D H+ I  Y +RL      + + + DS S    +D+EH LI  Y   L  ++  + 
Sbjct  1105  SHLADEHALIASYVARL-----QHCARVLDSPS---RLDEEHRLIARYAARLAAEAG-NV  1257

Query  1015  PRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMP  1074
              R P  +  + ++ +  +  +++A+LE +NR +  E  RL+ +HE              P
Sbjct  1258  TRPPTDLSFNFDANK--QQRQLIAELENKNREILQEIQRLRLEHEQAS----------QP  1401

Query  1075  TSPQSPRDAELIAEAKLLRQHK  1096
             T  ++ ++  L+AE +LLRQ K
Sbjct  1402  TPEKAQQNPTLLAELRLLRQRK  1467


>emb|Y15722.1| Homo sapiens mRNA for dystrobrevin B DTN-B1
Length=2244

 Score =  164 bits (416),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 231/502 (46%), Gaps = 80/502 (15%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  76    NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  255

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  256   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  429

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  430   MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  597

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  598   -QQRKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  774

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEY-------------------CTPTT-----  904
              +  NY +CQ+CF+ G     H   + M E+                   C PT      
Sbjct  775   QQCHNYQLCQNCFWRGHAGGPHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPTREPPHP  954

Query  905   ----SGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHD--  958
                   E   D A ++  +  T         M    V  +  G  + TP    Q S D  
Sbjct  955   VFPEQPEKPLDLAHIVPPRPLTN--------MNDTMVSHMSSG--VPTPTKRLQYSQDIP  1104

Query  959   ----DTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQ  1014
                 D H+ I  Y +RL      + + + DS S    +D+EH LI  Y   L  ++  + 
Sbjct  1105  SHLADEHALIASYVARL-----QHCARVLDSPS---RLDEEHRLIARYAARLAAEAG-NV  1257

Query  1015  PRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMP  1074
              R P  +  + ++ +  +  +++A+LE +NR +  E  RL+ +HE              P
Sbjct  1258  TRPPTDLSFNFDANK--QQRQLIAELENKNREILQEIQRLRLEHEQAS----------QP  1401

Query  1075  TSPQSPRDAELIAEAKLLRQHK  1096
             T  ++ ++  L+AE +LLRQ K
Sbjct  1402  TPEKAQQNPTLLAELRLLRQRK  1467


>ref|XM_001621487.1| Nematostella vectensis predicted protein (NEMVEDRAFT_v1g221874) 
partial mRNA
Length=588

 Score =  164 bits (415),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 77/185 (41%), Positives = 119/185 (64%), Gaps = 2/185 (1%)
 Frame = +1

Query  601  WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
            WER+ + + +PYYINHET+ T WDHP M +L Q LA+LNN++++AYRTAMKLR + K   
Sbjct  34   WERSETTSGIPYYINHETEKTQWDHPAMIQLMQDLAELNNIKYAAYRTAMKLRAIHKKTQ  213

Query  661  LDLLSLSAACDALDQHNLKQN--DQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMC  718
            L L+ +      LD+ ++     ++ + I +    +T ++     +  + +++P+  D+ 
Sbjct  214  LYLVEIPILTATLDEEDVPDGYTEKALSIPEASKIITALFINQNGDRQDFIDIPMASDLT  393

Query  719  LNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLL  778
            LN +LN+YD GRTG I+ LS K GI  LC A L+DKYRYLF+Q+ +S    D++RL L L
Sbjct  394  LNLMLNIYDPGRTGYIQALSLKIGISLLCAAKLQDKYRYLFRQMCNSRAVLDRKRLTLFL  573

Query  779  HDSIQ  783
             + +Q
Sbjct  574  QECLQ  588


>gb|AF143543.1|AF143543 Mus musculus alpha-dystrobrevin 2a mRNA, complete cds
Length=3144

 Score =  164 bits (415),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 149/549 (27%), Positives = 247/549 (44%), Gaps = 81/549 (14%)
 Frame = +3

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  357   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  536

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  537   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  716

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  717   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  881

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  882   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  1061

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHP  930
               NY +CQ CF+ G     H   + M EY   T+     +     L          ++ P
Sbjct  1062  CHNYQLCQDCFWRGHAGGSHSNQHQMKEY---TSWKSPAKKLTNALSKSLSCAS--SREP  1226

Query  931   RMGYLPVQTVLEGDNMETPASSPQLSHDDT------HSRIEHYASRLAEMENS-------  977
                  P Q     +        P  S +DT       S    + +R +  ++S       
Sbjct  1227  LHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEVEQNKM  1406

Query  978   ---------NGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPL----------------  1012
                       G  +  S++  + + DEH+LI  Y   L  + P                 
Sbjct  1407  LARAAPAFLKGRGIQYSLNVADRLADEHVLIGLYVNMLRNNPPCMLESSNRLDEEHRLIA  1586

Query  1013  ------------SQP---RSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQ  1057
                         SQP   RS   I  ++++ +  +  +++A+LE +NR +  E  RL+ +
Sbjct  1587  RYAARLAAESSSSQPTQQRSAPDISFTIDANK--QQRQLIAELENKNREILQEIQRLRVE  1760

Query  1058  HEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQL  1117
             HE     P P   +  PT         L+AE +LLRQ K  LE RM  L++  ++L  QL
Sbjct  1761  HEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELEQRMSALQESRRELMVQL  1910

Query  1118  HRLRQLLEQ  1126
               L +LL++
Sbjct  1911  EGLMKLLKE  1937


>gb|AF143544.1|AF143544 Mus musculus alpha-dystrobrevin 2b mRNA, complete cds
Length=1969

 Score =  164 bits (415),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 147/549 (26%), Positives = 248/549 (45%), Gaps = 81/549 (14%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  266   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  445

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  446   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  625

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  626   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  790

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  791   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCPQ  970

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHP  930
               NY +CQ CF+ G     H   + M EY   T+     +     L          ++ P
Sbjct  971   CHNYQLCQDCFWRGHAGGSHSNQHQMKEY---TSWKSPAKKLTNALSKSLSCAS--SREP  1135

Query  931   RMGYLPVQTVLEGDNMETPASSPQLSHDDT------HSRIEHYASRLAEMENS-------  977
                  P Q     +        P  S +DT       S    + +R +  ++S       
Sbjct  1136  LHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEVEQNKM  1315

Query  978   ---------NGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPL----------------  1012
                       G  +  S++  + + DEH+LI  Y   L  + P                 
Sbjct  1316  LARAAPAFLKGRGIQYSLNVADRLADEHVLIGLYVNMLRNNPPCMLESSNRLDEEHRLIA  1495

Query  1013  ------------SQP---RSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQ  1057
                         SQP   RS   I  ++++ +  +  +++A+LE +NR +  E  RL+ +
Sbjct  1496  RYAARLAAESSSSQPTQQRSAPDISFTIDANK--QQRQLIAELENKNREILQEIQRLRVE  1669

Query  1058  HEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQL  1117
             HE              PT  ++ ++  L+AE +LLRQ K  LE RM  L++  ++L  QL
Sbjct  1670  HEQAS----------QPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQL  1819

Query  1118  HRLRQLLEQ  1126
               L +LL++
Sbjct  1820  EGLMKLLKE  1846


>ref|XM_515336.2| PREDICTED: Pan troglodytes dystrobrevin, beta (DTNB), mRNA
Length=2487

 Score =  164 bits (415),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 231/502 (46%), Gaps = 80/502 (15%)
 Frame = +3

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  339   NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  518

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  519   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  692

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  693   MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  860

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  861   -QQRKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  1037

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEY-------------------CTPTT-----  904
              +  NY +CQ+CF+ G     H   + M E+                   C PT      
Sbjct  1038  QQCHNYQLCQNCFWRGHAGGPHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPTREPPHP  1217

Query  905   ----SGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHD--  958
                   E   D A ++  +  T         M    V  +  G  + TP    Q S D  
Sbjct  1218  VFPEQPEKPLDLAHIVPPRPLTN--------MNDTVVSHMSSG--VPTPTKRLQYSQDIP  1367

Query  959   ----DTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQ  1014
                 D H+ I  Y +RL      + + + DS S    +D+EH LI  Y   L  ++  + 
Sbjct  1368  SHLADEHALIASYVARL-----QHCARVLDSPS---RLDEEHRLIARYAARLAAEAG-NV  1520

Query  1015  PRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMP  1074
              R P  +  + ++ +  +  +++A+LE +NR +  E  RL+ +HE              P
Sbjct  1521  TRPPTDLSFNFDANK--QQRQLIAELENKNREILQEIQRLRLEHEQAS----------QP  1664

Query  1075  TSPQSPRDAELIAEAKLLRQHK  1096
             T  ++ ++  L+AE +LLRQ K
Sbjct  1665  TPEKAQQNPTLLAELRLLRQRK  1730


>dbj|AK300019.1| Homo sapiens cDNA FLJ60874 complete cds, highly similar to Dystrobrevin 
beta
Length=2050

 Score =  164 bits (414),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 231/502 (46%), Gaps = 80/502 (15%)
 Frame = +3

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  216   NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  395

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  396   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  569

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  570   MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  737

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  738   -QQRKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  914

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEY-------------------CTPTT-----  904
              +  NY +CQ+CF+ G     H   + M E+                   C PT      
Sbjct  915   QQCHNYQLCQNCFWRGHAGGPHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPTREPPHP  1094

Query  905   ----SGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHD--  958
                   E   D A ++  +  T         M    V  +  G  + TP    Q S D  
Sbjct  1095  VFPEQPEKPLDLAHIVPPRPLTN--------MNDTMVSHMSSG--VPTPTKRLQYSQDIP  1244

Query  959   ----DTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQ  1014
                 D H+ I  Y +RL      + + + DS S    +D+EH LI  Y   L  ++  + 
Sbjct  1245  SHLADEHALIASYVARL-----QHCARVLDSPS---RLDEEHRLIARYAARLAAEAG-NV  1397

Query  1015  PRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMP  1074
              R P  +  + ++ +  +  +++A+LE +NR +  E  RL+ +HE              P
Sbjct  1398  TRPPTDLSFNFDANK--QQRQLIAELENKNREILQEIQRLRLEHEQAS----------QP  1541

Query  1075  TSPQSPRDAELIAEAKLLRQHK  1096
             T  ++ ++  L+AE +LLRQ K
Sbjct  1542  TPEKAQQNPTLLAELRLLRQRK  1607


>ref|NM_021907.3| Homo sapiens dystrobrevin, beta (DTNB), transcript variant 1, 
mRNA
Length=2496

 Score =  164 bits (414),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 231/502 (46%), Gaps = 80/502 (15%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  326   NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  505

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  506   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  679

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  680   MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  847

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  848   -QQRKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  1024

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEY-------------------CTPTT-----  904
              +  NY +CQ+CF+ G     H   + M E+                   C PT      
Sbjct  1025  QQCHNYQLCQNCFWRGHAGGPHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPTREPPHP  1204

Query  905   ----SGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHD--  958
                   E   D A ++  +  T         M    V  +  G  + TP    Q S D  
Sbjct  1205  VFPEQPEKPLDLAHIVPPRPLTN--------MNDTMVSHMSSG--VPTPTKRLQYSQDIP  1354

Query  959   ----DTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQ  1014
                 D H+ I  Y +RL      + + + DS S    +D+EH LI  Y   L  ++  + 
Sbjct  1355  SHLADEHALIASYVARL-----QHCARVLDSPS---RLDEEHRLIARYAARLAAEAG-NV  1507

Query  1015  PRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMP  1074
              R P  +  + ++ +  +  +++A+LE +NR +  E  RL+ +HE              P
Sbjct  1508  TRPPTDLSFNFDANK--QQRQLIAELENKNREILQEIQRLRLEHEQAS----------QP  1651

Query  1075  TSPQSPRDAELIAEAKLLRQHK  1096
             T  ++ ++  L+AE +LLRQ K
Sbjct  1652  TPEKAQQNPTLLAELRLLRQRK  1717


>ref|NM_033147.2| Homo sapiens dystrobrevin, beta (DTNB), transcript variant 2, 
mRNA
Length=2406

 Score =  164 bits (414),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 231/502 (46%), Gaps = 80/502 (15%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  326   NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  505

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  506   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  679

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  680   MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  847

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  848   -QQRKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  1024

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEY-------------------CTPTT-----  904
              +  NY +CQ+CF+ G     H   + M E+                   C PT      
Sbjct  1025  QQCHNYQLCQNCFWRGHAGGPHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPTREPPHP  1204

Query  905   ----SGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHD--  958
                   E   D A ++  +  T         M    V  +  G  + TP    Q S D  
Sbjct  1205  VFPEQPEKPLDLAHIVPPRPLTN--------MNDTMVSHMSSG--VPTPTKRLQYSQDIP  1354

Query  959   ----DTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQ  1014
                 D H+ I  Y +RL      + + + DS S    +D+EH LI  Y   L  ++  + 
Sbjct  1355  SHLADEHALIASYVARL-----QHCARVLDSPS---RLDEEHRLIARYAARLAAEAG-NV  1507

Query  1015  PRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMP  1074
              R P  +  + ++ +  +  +++A+LE +NR +  E  RL+ +HE              P
Sbjct  1508  TRPPTDLSFNFDANK--QQRQLIAELENKNREILQEIQRLRLEHEQAS----------QP  1651

Query  1075  TSPQSPRDAELIAEAKLLRQHK  1096
             T  ++ ++  L+AE +LLRQ K
Sbjct  1652  TPEKAQQNPTLLAELRLLRQRK  1717


>ref|NM_183360.1| Homo sapiens dystrobrevin, beta (DTNB), transcript variant 4, 
mRNA
Length=2433

 Score =  164 bits (414),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 231/502 (46%), Gaps = 80/502 (15%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  326   NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  505

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  506   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  679

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  680   MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  847

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  848   -QQRKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  1024

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEY-------------------CTPTT-----  904
              +  NY +CQ+CF+ G     H   + M E+                   C PT      
Sbjct  1025  QQCHNYQLCQNCFWRGHAGGPHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPTREPPHP  1204

Query  905   ----SGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHD--  958
                   E   D A ++  +  T         M    V  +  G  + TP    Q S D  
Sbjct  1205  VFPEQPEKPLDLAHIVPPRPLTN--------MNDTMVSHMSSG--VPTPTKRLQYSQDIP  1354

Query  959   ----DTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQ  1014
                 D H+ I  Y +RL      + + + DS S    +D+EH LI  Y   L  ++  + 
Sbjct  1355  SHLADEHALIASYVARL-----QHCARVLDSPS---RLDEEHRLIARYAARLAAEAG-NV  1507

Query  1015  PRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMP  1074
              R P  +  + ++ +  +  +++A+LE +NR +  E  RL+ +HE              P
Sbjct  1508  TRPPTDLSFNFDANK--QQRQLIAELENKNREILQEIQRLRLEHEQAS----------QP  1651

Query  1075  TSPQSPRDAELIAEAKLLRQHK  1096
             T  ++ ++  L+AE +LLRQ K
Sbjct  1652  TPEKAQQNPTLLAELRLLRQRK  1717


>gb|AF022728.1|AF022728 Homo sapiens beta-dystrobrevin (BDTN) mRNA, complete cds
Length=2407

 Score =  164 bits (414),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 231/502 (46%), Gaps = 80/502 (15%)
 Frame = +3

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  237   NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  416

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  417   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  590

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  591   MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  758

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  759   -QQRKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  935

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEY-------------------CTPTT-----  904
              +  NY +CQ+CF+ G     H   + M E+                   C PT      
Sbjct  936   QQCHNYQLCQNCFWRGHAGGPHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPTREPPHP  1115

Query  905   ----SGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHD--  958
                   E   D A ++  +  T         M    V  +  G  + TP    Q S D  
Sbjct  1116  VFPEQPEKPLDLAHIVPPRPLTN--------MNDTMVSHMSSG--VPTPTKRLQYSQDIP  1265

Query  959   ----DTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQ  1014
                 D H+ I  Y +RL      + + + DS S    +D+EH LI  Y   L  ++  + 
Sbjct  1266  SHLADEHALIASYVARL-----QHCARVLDSPS---RLDEEHRLIARYAARLAAEAG-NV  1418

Query  1015  PRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMP  1074
              R P  +  + ++ +  +  +++A+LE +NR +  E  RL+ +HE              P
Sbjct  1419  TRPPTDLSFNFDANK--QQRQLIAELENKNREILQEIQRLRLEHEQAS----------QP  1562

Query  1075  TSPQSPRDAELIAEAKLLRQHK  1096
             T  ++ ++  L+AE +LLRQ K
Sbjct  1563  TPEKAQQNPTLLAELRLLRQRK  1628


>gb|BC081889.1| Rattus norvegicus dystrobrevin, beta, mRNA (cDNA clone MGC:93784 
IMAGE:7109493), complete cds
Length=3431

 Score =  164 bits (414),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 137/498 (27%), Positives = 231/498 (46%), Gaps = 76/498 (15%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  362   NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHATEISVSRLETVI  541

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   +NV   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  542   SSIYYQLNKRLPSTHQ--INVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  715

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +L   L +++++P  + E  SFG +  E +VR+CF   
Sbjct  716   MLDKLRYIFSQMSDSNGLMMFGKLDQFLKEALKLPTAVFEGPSFGYT--EHAVRTCFP--  883

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C    ++GFRYR 
Sbjct  884   -QQKKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCHCESMMGFRYRC  1060

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEY-------------------CTPTT-----  904
              +  NY +CQ+CF+ G     H   + M E                    C P+      
Sbjct  1061  QQCHNYQLCQNCFWRGHAGGPHSNQHQMKELSSWKSPAKKLSHAISKSLGCVPSREPPHP  1240

Query  905   ----SGEDVRDFAKVLKNKFRTKR--YFAKHPRMGY-LPVQTVLEGDNMETPASSPQLSH  957
                   E   D A ++  +  T        H   G   P + +  G +M      P L  
Sbjct  1241  VFPEQPEKPLDLAHIVPPRPLTNMNDTMVSHMSSGVPTPTKRLQYGQDM------PNLLA  1402

Query  958   DDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSP-LSQPR  1016
             D+ H+ I  Y +RL      + + + DS S    +D+EH LI  Y   L  ++  +++P 
Sbjct  1403  DE-HALIASYVARL-----QHCTRVLDSPS---RLDEEHRLIARYAARLAAEAGNMTRPP  1555

Query  1017  SPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTS  1076
             + A        ++R    +++A+LE +NR +  E  RL+ +HE              PT 
Sbjct  1556  TDASFNFDANKQQR----QLIAELENKNREILQEIQRLRLEHEQAS----------QPTP  1693

Query  1077  PQSPRDAELIAEAKLLRQ  1094
              ++ ++  L+AE +LLRQ
Sbjct  1694  EKAQQNPTLLAELRLLRQ  1747


>emb|Y15742.1| Mus musculus mRNA for dystrobrevin B, partial
Length=2192

 Score =  163 bits (413),  Expect = 5e-37, Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 236/493 (47%), Gaps = 62/493 (12%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  166   NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHSTEISVSRLETVI  345

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  346   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMVAAYDSEGRGKLTVFSVKAMLATMCGGK  519

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +L   L +++++P  + E  SFG +  E +VR+CF   
Sbjct  520   MLDKLRYIFSQMSDSNGLMMFGKLDQFLKEALKLPTAVFEGPSFGYT--EHAVRTCFP--  687

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C    ++GFRYR 
Sbjct  688   -QQKKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCHCESMMGFRYRC  864

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGED----VRDFAKVLKNKFRTKR  924
              +  NY +CQ+CF+ G  +  H   + M E+ +  +  +     +      + ++     
Sbjct  865   QQCHNYQLCQNCFWRGHASGAHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPSREPPHP  1044

Query  925   YFAKHPR----MGYL----PVQ----TVLE--GDNMETPASSPQLSHD------DTHSRI  964
              F + P     + +L    P+     TV+      + TP    Q S D      D H+ I
Sbjct  1045  VFPEQPEKPLDLAHLVPPRPLTNMNDTVVSHMSSGVPTPTKRLQYSQDMPNLLADEHALI  1224

Query  965   EHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHY-CQSLNQDSPLSQPRSPAQILI  1023
               Y +RL      + + + DS S    +D+EH LI  Y  +   +   +++P + A    
Sbjct  1225  ASYVARL-----QHCTRVLDSPS---RLDEEHRLIARYAARPAAEAGNMTRPPTDASFNF  1380

Query  1024  SLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDA  1083
                 ++R    +++A+LE +NR +  E  RL+ +HE              PT  ++ ++ 
Sbjct  1381  DANKQQR----QLIAELENKNREILQEIQRLRLEHEQAS----------QPTPEKAQQNP  1518

Query  1084  ELIAEAKLLRQHK  1096
              L+AE +LLRQ K
Sbjct  1519  MLLAELRLLRQRK  1557


>gb|BC049366.1| Homo sapiens dystrobrevin, beta, mRNA (cDNA clone MGC:57126 IMAGE:4817552), 
complete cds
Length=2435

 Score =  163 bits (412),  Expect = 7e-37, Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 230/502 (45%), Gaps = 80/502 (15%)
 Frame = +3

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  330   NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  509

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN++   YD+   G++ V S K  + ++C   
Sbjct  510   SSIYYQLNKRLHSTHQ--ISVEQSISLLLNFMTAAYDSEGRGKLTVFSVKAMLATMCGGK  683

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  684   MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  851

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  852   -QQRKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  1028

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEY-------------------CTPTT-----  904
              +  NY +CQ+CF+ G     H   + M E+                   C PT      
Sbjct  1029  QQCHNYQLCQNCFWRGHAGGPHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPTREPPHP  1208

Query  905   ----SGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHD--  958
                   E   D A ++  +  T         M    V  +  G  + TP    Q S D  
Sbjct  1209  VFPEQPEKPLDLAHIVPPRPLTN--------MNDTMVSHMSSG--VPTPTKRLQYSQDIP  1358

Query  959   ----DTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQ  1014
                 D H+ I  Y +RL      + + + DS S    +D+EH LI  Y   L  ++  + 
Sbjct  1359  SHLADEHALIASYVARL-----QHCARVLDSPS---RLDEEHRLIARYAARLAAEAG-NV  1511

Query  1015  PRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMP  1074
              R P  +  + ++ +  +  +++A+LE +NR +  E  RL+ +HE              P
Sbjct  1512  TRPPTDLSFNFDANK--QQRQLIAELENKNREILQEIQRLRLEHEQAS----------QP  1655

Query  1075  TSPQSPRDAELIAEAKLLRQHK  1096
             T  ++ ++  L+AE +LLRQ K
Sbjct  1656  TPEKAQQNPTLLAELRLLRQRK  1721


>gb|U46745.1|HSU46745 Human dystrobrevin-beta mRNA, complete cds
Length=2817

 Score =  163 bits (412),  Expect = 7e-37, Method: Compositional matrix adjust.
 Identities = 150/550 (27%), Positives = 256/550 (46%), Gaps = 83/550 (15%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQH---NLKQNDQPMDILQIINC  693
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++   NL  N + +++ ++   
Sbjct  347   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTE-LNVSRLEAV  523

Query  694   LTTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHL  751
             L+TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   +
Sbjct  524   LSTIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKI  703

Query  752   EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN  811
              DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   +
Sbjct  704   MDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---S  868

Query  812   NKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  869
              + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  
Sbjct  869   QQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQ  1048

Query  870   KHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRD-FAKVLKNKFRTKRYFAK  928
             +  NY +CQ CF+ G     H   + M EY +  +  + + +  +K L      K     
Sbjct  1049  QCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSRKPLHPM  1228

Query  929   HP-------RMGYL----PVQTVLE----------GDNMETPASSPQLSHDDTHSRIEHY  967
              P        + ++    PV ++ +          G    T +S P+ S  + +  +   
Sbjct  1229  FPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEVEQNKLLARA  1408

Query  968   ASRLAEMENSNGSYLNDSISPNESIDDEHLLI----------------------------  999
             A    +     G  +  S++  + + DEH+LI                            
Sbjct  1409  APAFLK-----GKGIQYSLNVADRLADEHVLIGLYVNMLRNNPSCMLESSNRLDEEHRLI  1573

Query  1000  QHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQ  1056
               Y   L  +S  SQP   RS   I  ++++ +  +  +++A+LE +NR +  E  RL+ 
Sbjct  1574  ARYAARLAAESSSSQPPQQRSAPDISFTIDANK--QQRQLIAELENKNREILQEIQRLRL  1747

Query  1057  QHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQ  1116
             +HE     P P   +  PT         L+AE +LLRQ K  LE RM  L++  ++L  Q
Sbjct  1748  EHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELEQRMSALQESRRELMVQ  1897

Query  1117  LHRLRQLLEQ  1126
             L  L +LL++
Sbjct  1898  LEGLMKLLKE  1927


>ref|NM_058459.4| Caenorhabditis elegans DYstroBrevin homolog family member (dyb-1) 
(dyb-1) mRNA, complete cds
Length=1948

 Score =  162 bits (411),  Expect = 8e-37, Method: Compositional matrix adjust.
 Identities = 140/499 (28%), Positives = 220/499 (44%), Gaps = 73/499 (14%)
 Frame = +3

Query  635   LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIIN--  692
             L D +++RF+ YR A KLR +Q+   + L+ +    +A  ++ L  N  P+  +   +  
Sbjct  156   LQDFDSIRFATYRAACKLRFIQQKTKVHLVDIWNMIEAFRENGL--NALPLHTVIKTSRA  329

Query  693   --CLTTIYDRLEQE--HNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCK  748
                LTT++  L +    +  V+  + + + L +LL  YD   TGR+ V S K  + +LC 
Sbjct  330   ELLLTTVFHNLNKRLVASQHVDTDVSISLLLAFLLGAYDKQNTGRLTVFSIKVALATLCA  509

Query  749   AHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQ  808
               L DK RY+F Q+A S G  D  +    L   + +   + E  +FG S  E +V  CF 
Sbjct  510   GKLVDKLRYIFSQIADSNGLMDHIKFTDFLQQILSLTTAVFEAPTFGFS--ENAVNQCF-  680

Query  809   FANNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRY  866
               +   ++   +FLD    +P    ++WLP+LHR+A+     H   C+ C+     GFRY
Sbjct  681   --HKDEKVSLNVFLDTFLSDPCPPCIMWLPLLHRMASVSNVYHPVVCDACQVRSFTGFRY  854

Query  867   RSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYF  926
             +  +  NY +CQSCF+ GR ++ H   + M EY +                 K  TK+  
Sbjct  855   KCQRCANYQLCQSCFWRGRTSQNHSNEHEMKEYSS----------------YKSPTKQLV  986

Query  927   -AKHPRMGYLPVQTVLEGDNMET-------PASSPQ---------LSHDDTHSRIEHYAS  969
              + H  +  +P  + +   N++        P SS           +    T  R +H A+
Sbjct  987   HSIHKSLQCIPATSTVGDANIDIFNAKIGGPVSSKPARPLNLNNIVPATPTTIRRQHAAT  1166

Query  970   RLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN--QDSPLSQPRSPAQILISLES  1027
               A+   S    L    S    IDDEH LI  Y   L+   D PLS  R       S+ S
Sbjct  1167  SSADWPTS-PVLLPGQASHGGVIDDEHKLIARYAAKLSGRADYPLSNGR-------SMNS  1322

Query  1028  EERGELERILADLEEENRNLQAEYDRLKQQ-HEHKGLSPLPSPPEMMPTSPQSPRDAELI  1086
                G+   ++A LEEEN  +  E  RL+ Q     GL+ L              RD ++ 
Sbjct  1323  SMVGDERTLIAQLEEENSMMVREMARLESQTTSDDGLAGL--------------RDRKME  1460

Query  1087  AEAKLLRQHKGRLEARMQI  1105
              E K+    + R E  MQ+
Sbjct  1461  LEEKMFEMQQRRRELMMQL  1517


>emb|AJ131742.1| Caenorhabditis elegans mRNA for dystrobrevin
Length=1773

 Score =  162 bits (411),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 140/499 (28%), Positives = 220/499 (44%), Gaps = 73/499 (14%)
 Frame = +1

Query  635   LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIIN--  692
             L D +++RF+ YR A KLR +Q+   + L+ +    +A  ++ L  N  P+  +   +  
Sbjct  133   LQDFDSIRFATYRAACKLRFIQQKTKVHLVDIWNMIEAFRENGL--NALPLHTVIKTSRA  306

Query  693   --CLTTIYDRLEQE--HNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCK  748
                LTT++  L +    +  V+  + + + L +LL  YD   TGR+ V S K  + +LC 
Sbjct  307   ELLLTTVFHNLNKRLVASQHVDTDVSISLLLAFLLGAYDKQNTGRLTVFSIKVALATLCA  486

Query  749   AHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQ  808
               L DK RY+F Q+A S G  D  +    L   + +   + E  +FG S  E +V  CF 
Sbjct  487   GKLVDKLRYIFSQIADSNGLMDHIKFTDFLQQILSLTTAVFEAPTFGFS--ENAVNQCF-  657

Query  809   FANNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRY  866
               +   ++   +FLD    +P    ++WLP+LHR+A+     H   C+ C+     GFRY
Sbjct  658   --HKDEKVSLNVFLDTFLSDPCPPCIMWLPLLHRMASVSNVYHPVVCDACQVRSFTGFRY  831

Query  867   RSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYF  926
             +  +  NY +CQSCF+ GR ++ H   + M EY +                 K  TK+  
Sbjct  832   KCQRCANYQLCQSCFWRGRTSQNHSNEHEMKEYSS----------------YKSPTKQLV  963

Query  927   -AKHPRMGYLPVQTVLEGDNMET-------PASSPQ---------LSHDDTHSRIEHYAS  969
              + H  +  +P  + +   N++        P SS           +    T  R +H A+
Sbjct  964   HSIHKSLQCIPATSTVGDANIDIFNAKIGGPVSSKPARPLNLNNIVPATPTTIRRQHAAT  1143

Query  970   RLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN--QDSPLSQPRSPAQILISLES  1027
               A+   S    L    S    IDDEH LI  Y   L+   D PLS  R       S+ S
Sbjct  1144  SSADWPTS-PVLLPGQASHGGVIDDEHKLIARYAAKLSGRADYPLSNGR-------SMNS  1299

Query  1028  EERGELERILADLEEENRNLQAEYDRLKQQ-HEHKGLSPLPSPPEMMPTSPQSPRDAELI  1086
                G+   ++A LEEEN  +  E  RL+ Q     GL+ L              RD ++ 
Sbjct  1300  SMVGDERTLIAQLEEENSMMVREMARLESQTTSDDGLAGL--------------RDRKME  1437

Query  1087  AEAKLLRQHKGRLEARMQI  1105
              E K+    + R E  MQ+
Sbjct  1438  LEEKMFEMQQRRRELMMQL  1494


>ref|XM_001380100.1| PREDICTED: Monodelphis domestica similar to beta-dystrobrevin 
(LOC100030691), mRNA
Length=2139

 Score =  162 bits (411),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 232/501 (46%), Gaps = 78/501 (15%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDI----LQIIN  692
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I    L+ I 
Sbjct  76    NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHNTEISVSRLETI-  252

Query  693   CLTTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCK  748
              +++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C 
Sbjct  253   -ISSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCG  423

Query  749   AHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQ  808
               + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF 
Sbjct  424   GKMLDKLRYIFSQMSDSNGLMIFNKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP  597

Query  809   FANNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRY  866
                 + +I   +FLD +  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRY
Sbjct  598   ---QQKKIMLNMFLDTLMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRY  768

Query  867   RSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEY-------------------CTPTT---  904
             R  +  NY +CQ+CF+ G     H   + M E+                   C PT    
Sbjct  769   RCQQCHNYQLCQNCFWRGHANGPHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPTREPP  948

Query  905   ------SGEDVRDFAKVLKNKFRTKR--YFAKHPRMGYLPVQTVLEGDNMETPASSPQLS  956
                     E   D A ++  +  T        H   G +P  T     + E P      S
Sbjct  949   HPVFPEQPEKPLDLAHIVPPRPLTNMNDTMVSHMSSG-VPTPTKRLQYSQEIP------S  1107

Query  957   H-DDTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQP  1015
             H  D H+ I  Y SRL      + + + DS S    +D+EH LI  Y   L  ++  +  
Sbjct  1108  HLADEHALIASYVSRL-----QHCARVLDSPS---RLDEEHRLIARYAARLAAEAG-NVT  1260

Query  1016  RSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPT  1075
             R P  +  + ++ +  +  +++A+LE +NR +  E  RL+ +HE              PT
Sbjct  1261  RPPTDLSFNFDANK--QQRQLIAELENKNREILQEIQRLRLEHEQAS----------QPT  1404

Query  1076  SPQSPRDAELIAEAKLLRQHK  1096
               ++ ++  L+AE +LLRQ K
Sbjct  1405  PEKAQQNPTLLAELRLLRQRK  1467


>ref|NM_032978.6| Homo sapiens dystrobrevin, alpha (DTNA), transcript variant 4, 
mRNA
Length=4579

 Score =  162 bits (410),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 150/550 (27%), Positives = 249/550 (45%), Gaps = 83/550 (15%)
 Frame = +3

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQH---NLKQNDQPMDILQIINC  693
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++   NL  N + +++ ++   
Sbjct  291   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTE-LNVSRLEAV  467

Query  694   LTTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHL  751
             L+TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   +
Sbjct  468   LSTIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKI  647

Query  752   EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN  811
              DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   +
Sbjct  648   MDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---S  812

Query  812   NKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  869
              + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  
Sbjct  813   QQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQ  992

Query  870   KHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKH  929
             +  NY +CQ CF+ G     H   + M EY   T+     +     L          ++ 
Sbjct  993   QCHNYQLCQDCFWRGHAGGSHSNQHQMKEY---TSWKSPAKKLTNALSKSLSCAS--SRE  1157

Query  930   PRMGYLPVQTVLEGDNMETPASSPQLSHDDT------HSRIEHYASRLAEMENS------  977
             P     P Q     +        P  S +DT       S    + +R +  ++S      
Sbjct  1158  PLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEVEQNK  1337

Query  978   ----------NGSYLNDSISPNESIDDEHLLI----------------------------  999
                        G  +  S++  + + DEH+LI                            
Sbjct  1338  LLARAAPAFLKGKGIQYSLNVADRLADEHVLIGLYVNMLRNNPSCMLESSNRLDEEHRLI  1517

Query  1000  QHYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQ  1056
               Y   L  +S  SQP   RS   I  ++++ +  +  +++A+LE +NR +  E  RL+ 
Sbjct  1518  ARYAARLAAESSSSQPPQQRSAPDISFTIDANK--QQRQLIAELENKNREILQEIQRLRL  1691

Query  1057  QHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQ  1116
             +HE     P P   +  PT         L+AE +LLRQ K  LE RM  L++  ++L  Q
Sbjct  1692  EHEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELEQRMSALQESRRELMVQ  1841

Query  1117  LHRLRQLLEQ  1126
             L  L +LL++
Sbjct  1842  LEGLMKLLKE  1871


>dbj|AK301386.1| Homo sapiens cDNA FLJ58632 complete cds, highly similar to Dystrobrevin 
beta
Length=2330

 Score =  162 bits (410),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 230/502 (45%), Gaps = 80/502 (15%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  212   NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  391

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H    +V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  392   SSIYYQLNKRLPSTHQ--TSVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  565

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  566   MLDKLRYVFSQMSDSNGLMIFSKFDQFLTEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  733

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  734   -QQRKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  910

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEY-------------------CTPTT-----  904
              +  NY +CQ+CF+ G     H   + M E+                   C PT      
Sbjct  911   QQCHNYQLCQNCFWRGHAGGPHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPTREPPHP  1090

Query  905   ----SGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHD--  958
                   E   D A ++  +  T         M    V  +  G  + TP    Q S D  
Sbjct  1091  VFPEQPEKPLDLAHIVPPRPLTN--------MNDTMVSHMSSG--VPTPTKRLQYSQDIP  1240

Query  959   ----DTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQ  1014
                 D H+ I  Y +RL      + + + DS S    +D+EH LI  Y   L  ++  + 
Sbjct  1241  SHLADEHALIASYVARL-----QHCARVLDSPS---RLDEEHRLIARYAARLAAEAG-NV  1393

Query  1015  PRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMP  1074
              R P  +  + ++ +  +  +++A+LE +NR +  E  RL+ +HE              P
Sbjct  1394  TRPPTDLSFNFDANK--QQRQLIAELENKNREILQEIQRLRLEHEQAS----------QP  1537

Query  1075  TSPQSPRDAELIAEAKLLRQHK  1096
             T  ++ ++  L+AE +LLRQ K
Sbjct  1538  TPEKAQQNPTLLAELRLLRQRK  1603


>ref|XM_001667709.1| Caenorhabditis briggsae hypothetical protein CBG22285 partial 
mRNA
Length=1755

 Score =  161 bits (408),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 140/495 (28%), Positives = 217/495 (43%), Gaps = 68/495 (13%)
 Frame = +1

Query  635   LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIIN--  692
             L D +++RF+ YR A KLR +Q+   + L+ +    +A  ++ L  N  P+  +   +  
Sbjct  127   LQDFDSIRFATYRAACKLRFIQQKTKVHLVDIWNMIEAFRENGL--NALPLHTVIKTSRA  300

Query  693   --CLTTIYDRLEQE--HNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCK  748
                LTT++  L +    +  V+  + + + L +LL  YD   TGR+ V S K  + +LC 
Sbjct  301   ELLLTTVFHNLNKRLVASQHVDTDVSISLLLAFLLGAYDKQNTGRLTVFSIKVALATLCA  480

Query  749   AHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQ  808
               L DK RY+F Q+A S G  D  +    L   + +   + E  +FG S  E +V  CF 
Sbjct  481   GKLVDKLRYIFSQIADSNGLMDHIKFTDFLQQVLSLTTAVFEAPTFGFS--ESAVTQCF-  651

Query  809   FANNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRY  866
               +   ++   +FLD    +P    ++WLP+LHR+AA     H   C+ C+     GFRY
Sbjct  652   --HKDDKVSLNVFLDTFLSDPCPPCIMWLPLLHRMAAVSNVYHPVVCDACQVRSFTGFRY  825

Query  867   RSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYF  926
             +  +  NY +CQSCF+ GR ++ H   + M EY          +  AK L +        
Sbjct  826   KCQRCANYQLCQSCFWRGRTSQNHSNEHEMKEY-------SSYKSPAKQLVHSI------  966

Query  927   AKHPRMGYLPVQTVLEG-----DNMETPASSPQ--------LSHDDTHSRIEHYASRLAE  973
               H  +  +P  +  +      +    P   P         +    T  R +H A+  A+
Sbjct  967   --HKSLQCIPASSSGDANIDILNTTGVPIGKPTRPLNLNNIVPATPTTIRRQHAATSSAD  1140

Query  974   MENSNGSYLNDSISPNESIDDEHLLIQHYCQSLN--QDSPLSQPRSPAQILISLESEERG  1031
                S    L    S    IDDEH LI  Y   L+   D PLS  RS    +I    +ER 
Sbjct  1141  WPTS-PVLLPGQASHGGVIDDEHKLIARYAAKLSGRADYPLSNGRSMNSSMI---EDER-  1305

Query  1032  ELERILADLEEENRNLQAEYDRLKQQ-HEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAK  1090
                 ++A LEEEN  +  E  RL+ Q     GL+ L              RD ++  E K
Sbjct  1306  ---TLIAQLEEENSMMVREMARLESQTTSDDGLAGL--------------RDRKMELEEK  1434

Query  1091  LLRQHKGRLEARMQI  1105
             +    + R E  MQ+
Sbjct  1435  MFEMQQRRRELMMQL  1479


>ref|XM_001054053.1| PREDICTED: Rattus norvegicus similar to dystrobrevin alpha isoform 
1 (predicted), transcript variant 1 (RGD1561985_predicted), 
mRNA
Length=2111

 Score =  161 bits (407),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 145/549 (26%), Positives = 249/549 (45%), Gaps = 81/549 (14%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  409   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  588

Query  695   TTIYDRLEQE--HNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +T++ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  589   STMFYQLNKRMPSTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  768

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  769   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  933

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  934   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  1113

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHP  930
               NY +CQ CF+ G     H   + M EY   T+     +     L          ++ P
Sbjct  1114  CHNYQLCQDCFWRGHAGGSHSNQHQMKEY---TSWKSPAKKLTNALSKSLSCAS--SREP  1278

Query  931   RMGYLPVQTVLEGDNMETPASSPQLSHDDT------HSRIEHYASRLAEMENS-------  977
                  P Q     +        P  S +DT       S    + +R +  ++S       
Sbjct  1279  LHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEVEQNKI  1458

Query  978   ---------NGSYLNDSISPNESIDDEHLLI----------------------------Q  1000
                       G  ++ S++  + + DEH+LI                             
Sbjct  1459  LARAAPAFLKGKGIHYSLNVADRLADEHVLIGLYVNMLRNNPSCMLESSNRLDEEHRLIA  1638

Query  1001  HYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQ  1057
              Y   L  +S  SQP   RS   +  ++++ +  +  +++A+LE +NR +  E  RL+ +
Sbjct  1639  RYAARLAAESSSSQPTQQRSAPDVSFTIDANK--QQRQLIAELENKNREILQEIQRLRVE  1812

Query  1058  HEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQL  1117
             HE              PT  ++ ++  L+AE +LLRQ K  LE RM  L++  ++L  QL
Sbjct  1813  HEQAS----------QPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQL  1962

Query  1118  HRLRQLLEQ  1126
               L +LL++
Sbjct  1963  EGLMKLLKE  1989


>ref|XM_001054243.1| PREDICTED: Rattus norvegicus similar to dystrobrevin alpha isoform 
1 (predicted), transcript variant 3 (RGD1561985_predicted), 
mRNA
Length=2080

 Score =  160 bits (406),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 147/549 (26%), Positives = 248/549 (45%), Gaps = 81/549 (14%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  257   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  436

Query  695   TTIYDRLEQE--HNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +T++ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  437   STMFYQLNKRMPSTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  616

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  617   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  781

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  782   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  961

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHP  930
               NY +CQ CF+ G     H   + M EY   T+     +     L          ++ P
Sbjct  962   CHNYQLCQDCFWRGHAGGSHSNQHQMKEY---TSWKSPAKKLTNALSKSLSCAS--SREP  1126

Query  931   RMGYLPVQTVLEGDNMETPASSPQLSHDDT------HSRIEHYASRLAEMENS-------  977
                  P Q     +        P  S +DT       S    + +R +  ++S       
Sbjct  1127  LHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEVEQNKI  1306

Query  978   ---------NGSYLNDSISPNESIDDEHLLI----------------------------Q  1000
                       G  ++ S++  + + DEH+LI                             
Sbjct  1307  LARAAPAFLKGKGIHYSLNVADRLADEHVLIGLYVNMLRNNPSCMLESSNRLDEEHRLIA  1486

Query  1001  HYCQSLNQDSPLSQP---RSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQ  1057
              Y   L  +S  SQP   RS   +  ++++ +  +  +++A+LE +NR +  E  RL+ +
Sbjct  1487  RYAARLAAESSSSQPTQQRSAPDVSFTIDANK--QQRQLIAELENKNREILQEIQRLRVE  1660

Query  1058  HEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQL  1117
             HE     P P   +  PT         L+AE +LLRQ K  LE RM  L++  ++L  QL
Sbjct  1661  HEQAS-QPTPEKAQQNPT---------LLAELRLLRQRKDELEQRMSALQESRRELMVQL  1810

Query  1118  HRLRQLLEQ  1126
               L +LL++
Sbjct  1811  EGLMKLLKE  1837


>tpd|BR000175.1| TPA_exp: Ciona intestinalis Ci-ZF(ZZ)-4 mRNA for zinc finger 
protein, complete cds
Length=2253

 Score =  159 bits (403),  Expect = 8e-36, Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 205/431 (47%), Gaps = 44/431 (10%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQI--INCL  694
             + ++++FS YRT++KL R+Q A  L  ++ +     + +  L + +  +D +    +N  
Sbjct  140   EFHDIKFSVYRTSLKLGRIQDAFHLRGITTTTLYSKVKKLILNKTNTSIDNVTTEGMN--  313

Query  695   TTIYDRLEQ-----EHNNLVNVP--LCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLC  747
                Y+ LE       H++L  V   LC  +C   +   +      R+ V++     I L 
Sbjct  314   ---YEELEGLVRSLYHDSLSKVSKKLCECLC-TLVFQTFQDFTENRVSVIAVVLFFIILG  481

Query  748   KAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCF  807
                L  KY+ LF   + S     + R GL+L   +++   +GE  +FG  NI  ++ SCF
Sbjct  482   GEELVKKYKLLFSLYSGSLRMLTRSRCGLMLAHCVRLTDVVGEDINFG--NISSAIASCF  655

Query  808   QFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYR  867
                      E  L L W+  EPQS+VWLP +HR+  A+++ H+ +C  CK  PIIG R++
Sbjct  656   SGVLGASISEQQL-LQWLFKEPQSLVWLPTMHRLNLAKSSVHEVQCAECKIRPIIGLRFQ  832

Query  868   SLKHFNYDICQSCFFS-GRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYF  926
              LK  +YD C  CF +    ++ HK+++P  EYCTP    E V  FA+ ++N   TKRY 
Sbjct  833   CLKCLDYDTCHHCFLTQSNSSRSHKLNHPRQEYCTPAGGREKVNAFARTIRN-IVTKRYK  1009

Query  927   AKHPRMGYLPVQTVLEGDN--METPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLND  984
              K     +LP+      DN  MET     +L+       I H A+  AE E      L  
Sbjct  1010  QKPLSSSFLPIDQSPSSDNVVMET---RDKLNESSDFVEINHLAA--AEREE-----LEK  1159

Query  985   SISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEEN  1044
              +S  +  +D+        +S   D P            S E E+R  L+  L  + ++N
Sbjct  1160  LVSKLKEENDKMSGTVQLLESTKHDVP------------SNEIEDRLILQSHLDTVTQQN  1303

Query  1045  RNLQAEYDRLK  1055
             ++LQ+E D LK
Sbjct  1304  KSLQSELDNLK  1336


>gb|DQ516347.1| Homo sapiens dystrotelin mRNA, complete cds
Length=2051

 Score =  158 bits (400),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 156/291 (53%), Gaps = 12/291 (4%)
 Frame = +1

Query  638   LNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNL-KQNDQPMDILQIINCLTT  696
             LN++  S YRTA KL+ +Q    LDL+  S     L + +  +     + + Q+   L  
Sbjct  142   LNSIENSIYRTAFKLQSVQTLCQLDLIDSSLIQQVLLRPSFWEARKHSLSVQQLSQALQE  321

Query  697   IYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYR  756
             ++ +  +E+   V+ P   ++ L+ L  +Y++  TG ++++     +I+L       KYR
Sbjct  322   LFQKAREENPGQVH-PRAPELTLSLLTTMYNSKGTGFLQLMPAAAALITLSGDSPLSKYR  498

Query  757   YLFKQVA-SSTGFCD------QRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQF  809
              LF+  A +S G  D      +R L  LL D  QIP  +GE  +     +E + RSCFQ 
Sbjct  499   ALFQLYAENSRGGYDSGPRMTRRVLRKLLTDLQQIPTFVGESRAL--CPVESATRSCFQG  672

Query  810   ANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  869
               + P I+   FL W++ EP  ++WLP  HR++AAE   H A+C +C+  PI G RYR L
Sbjct  673   VLS-PAIKEEKFLSWVQSEPPILLWLPTCHRLSAAERVTHPARCTLCRTFPITGLRYRCL  849

Query  870   KHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKF  920
             K  N+DICQ CF SG  +K H+  +P++E+C   ++ ++ +   + L+N  
Sbjct  850   KCLNFDICQMCFLSGLHSKSHQKSHPVIEHCIQMSAMQNTKLLFRTLRNNL  1002


>dbj|AK020881.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, 
clone:A930021A21 product:utrophin, full insert sequence
Length=885

 Score =  158 bits (399),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 73/154 (47%), Positives = 113/154 (73%), Gaps = 4/154 (2%)
 Frame = +1

Query  279  QDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRS  338
            +D+Q EI+AH D++ ++D N QK++++L  S++A +LQ RLD+MN +W++L+ KS +IR+
Sbjct  400  KDIQAEIDAHNDIFKSIDGNRQKMVKALGNSEEATMLQHRLDDMNQRWNDLKAKSASIRA  579

Query  339  HLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTK  398
            HLEAS+++W RL  SL+EL+ WL +KD+EL +Q PIGGD PA+Q Q D  +  +RELK K
Sbjct  580  HLEASAEKWNRLLASLEELIKWLNMKDEELKKQMPIGGDVPALQLQYDHCKVLRRELKEK  759

Query  399  EPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELP  432
            E  +++ ++  R+FL +QP+E  E    EPR  P
Sbjct  760  EYSVLNAVDQARVFLADQPIEAPE----EPRRNP  849


>ref|XM_001787345.1| PREDICTED: Bos taurus similar to Dystrotelin (LOC100137960), 
mRNA
Length=2013

 Score =  154 bits (388),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 151/291 (51%), Gaps = 12/291 (4%)
 Frame = +1

Query  638   LNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNL-KQNDQPMDILQIINCLTT  696
             LN++  S YRTA KLR +Q    LDL+  S     L   +L +  +  + + Q+   L  
Sbjct  280   LNSIENSTYRTAFKLRSVQTLCQLDLIGSSLIQHVLRHQSLWEAGESTLSVQQLFQALQE  459

Query  697   IYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYR  756
             ++ ++  E    ++ P   ++ L+ L  +YD+  TG I++      +I+L       KY 
Sbjct  460   MFQKVRVEKPGQMH-PRASELTLSLLTTMYDSTGTGFIKLAPAAAALITLSGDSPLTKYT  636

Query  757   YLFKQVA-SSTGFCD------QRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQF  809
              LF+  A ++ G  D      +R L  LL D  QIP  +GE  +    ++E + RSCFQ 
Sbjct  637   ALFQLYAENNRGGHDLGARMTRRVLRNLLTDLQQIPTVVGESRAL--CSVESATRSCFQG  810

Query  810   ANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  869
               + P I+   FL W++ EP  ++W+P  +R++A E A H  +C IC+  PI G RYR L
Sbjct  811   VLS-PVIKEEKFLSWLQSEPPILLWIPTCYRLSATEMATHPVRCRICRNFPITGLRYRCL  987

Query  870   KHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKF  920
             K  N+DICQ+CF S    + H+  +P+VE C   ++ +D R   +  +N  
Sbjct  988   KCLNFDICQACFLSSFQGESHQKSHPVVENCIQMSAKDDTRLVLRTPRNNL  1140


>gb|S60973.1| dystrophin {out-of-frame deletion of exon 50} [human, fibroblasts, 
mRNA Mutant, 362 nt]
Length=362

 Score =  154 bits (388),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 75/75 (100%), Positives = 75/75 (100%), Gaps = 0/75 (0%)
 Frame = +3

Query  1    MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
            MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  138  MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  317

Query  61   EQRRPQLEELITAAQ  75
            EQRRPQLEELITAAQ
Sbjct  318  EQRRPQLEELITAAQ  362


>gb|M63072.1|HUMDMDC Human Duchenne muscular dystrophy protein (DMD) mRNA, 3' end
Length=362

 Score =  154 bits (388),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 75/75 (100%), Positives = 75/75 (100%), Gaps = 0/75 (0%)
 Frame = +3

Query  1    MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
            MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL
Sbjct  138  MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  317

Query  61   EQRRPQLEELITAAQ  75
            EQRRPQLEELITAAQ
Sbjct  318  EQRRPQLEELITAAQ  362


>gb|BC046265.1| Xenopus laevis dystrobrevin, alpha, mRNA (cDNA clone MGC:53516 
IMAGE:5572622), complete cds
Length=3736

 Score =  151 bits (382),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 215/477 (45%), Gaps = 71/477 (14%)
 Frame = +3

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL +++L   D    +++ ++   L
Sbjct  201   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNIIEALRENSLNNVDPNVELNVARLEAVL  380

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + +NV   + + LN+LL  YD+   G+I V + K  + +LC   + 
Sbjct  381   STIFYQLNKRMPTTHQINVEQSISLMLNFLLAAYDSEGHGKITVFAVKMALATLCGGKIM  560

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY++  ++ + G          L + +++P  + E  SFG +  E + RSCF   + 
Sbjct  561   DKLRYIYSMISDANGVMVSGCYDQFLREVLKLPTAIFEGPSFGYT--EQAARSCF---SQ  725

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  726   QKKVTLNSFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  905

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKR------  924
               NY +CQ CF+ G  +  H   + M EY   T+     +  +  L              
Sbjct  906   CHNYQLCQDCFWRGHASGSHSNQHQMKEY---TSWKSPAKKLSTALSKSLSCASSREPLH  1076

Query  925   -YFAKHPRMG-----YLPVQTVLE-GDNM---ETPASSPQLS-----HDDTHSRIEHY--  967
               F   P M       +P + V    DN+     P+S    +     H  T      Y  
Sbjct  1077  PMFPDQPEMPLNLAHIVPPRPVTSMNDNIFSHSVPSSGSPFTNKISPHKSTEVEQSKYLA  1256

Query  968   ------------------ASRLAEMENSNGSYLN----------DSISPNESIDDEHLLI  999
                               A RLA+     G Y N          DS S    +D+EH LI
Sbjct  1257  RAAPTLLKGKGLQYSLGVADRLADEHALIGVYANMLQNNLPRMLDSPS---RLDEEHRLI  1427

Query  1000  QHYCQSL-NQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLK  1055
               Y   L  ++S   Q R  + I  ++++ +  +  +++A+LE +NR +  E  RL+
Sbjct  1428  ARYAARLAAENSSSVQQRGGSDITFTIDANK--QQRQLIAELENKNREILQEIQRLR  1592


>emb|AJ544617.1| Takifugu rubripes dmd gene for putative dystrophin, exons 74-82
Length=17490

 Score =  150 bits (379),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 74/83 (89%), Positives = 78/83 (93%), Gaps = 0/83 (0%)
 Frame = +2

Query  1044  NRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARM  1103
             NR LQ+EYDRLK+ H+ KGLSPLPSPPEM+P SPQS RDAELIAEAKLLRQHKGRLEARM
Sbjct  7343  NRKLQSEYDRLKKAHDRKGLSPLPSPPEMLPVSPQSARDAELIAEAKLLRQHKGRLEARM  7522

Query  1104  QILEDHNKQLESQLHRLRQLLEQ  1126
             QILEDHNKQLESQLHRLRQLLEQ
Sbjct  7523  QILEDHNKQLESQLHRLRQLLEQ  7591


 Score =  106 bits (265),  Expect = 8e-20, Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 52/54 (96%), Gaps = 0/54 (0%)
 Frame = +2

Query  993   DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRN  1046
             DDEH+LIQHYCQSLNQ SPLSQPRSPAQILIS+E+EE+GELER+L DLE+ENR+
Sbjct  6677  DDEHMLIQHYCQSLNQGSPLSQPRSPAQILISMETEEKGELERVLNDLEQENRS  6838


 Score = 97.8 bits (242),  Expect = 3e-17, Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 52/62 (83%), Gaps = 9/62 (14%)
 Frame = +1

Query  903  TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDTHS  962
            TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQT+LEGDNMET          DTH+
Sbjct  196  TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTILEGDNMET---------*DTHT  348

Query  963  RI  964
            +I
Sbjct  349  QI  354


 Score = 58.9 bits (141),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 26/32 (81%), Positives = 30/32 (93%), Gaps = 0/32 (0%)
 Frame = +3

Query  1199  GHNVGSLFHMADDLGRAMESLVSVMTDEEGAE  1230
             G ++GSLFHMADDLGRAMESLVS+MTDE+ AE
Sbjct  9453  GRSIGSLFHMADDLGRAMESLVSIMTDEQSAE  9548


 Score = 46.2 bits (108),  Expect(2) = 4e-05, Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 27/32 (84%), Gaps = 1/32 (3%)
 Frame = +2

Query  1168  GEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG  1199
             G+++L SP QD S GLEEVMEQLNNSFP S+G
Sbjct  8168  GDDELSSPSQDAS-GLEEVMEQLNNSFPHSQG  8260


 Score = 31.2 bits (69),  Expect(2) = 4e-05, Method: Compositional matrix adjust.
 Identities = 29/42 (69%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
 Frame = +1

Query  1128  QAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGE  1169
             Q ++KVNGT +SSPSTS QRSDSS P LLRV  SQT+D+MG+
Sbjct  7966  QTDSKVNGTALSSPSTSSQRSDSSLP-LLRVAASQTTDTMGK  8088


 Score = 45.4 bits (106),  Expect = 0.19, Method: Compositional matrix adjust.
 Identities = 21/23 (91%), Positives = 22/23 (95%), Gaps = 0/23 (0%)
 Frame = +2

Query  970   RLAEMENSNGSYLNDSISPNESI  992
             RLAEMEN NGSYLNDSISPNES+
Sbjct  4826  RLAEMENRNGSYLNDSISPNESM  4894


 Score = 45.4 bits (106),  Expect = 0.20, Method: Compositional matrix adjust.
 Identities = 19/22 (86%), Positives = 21/22 (95%), Gaps = 0/22 (0%)
 Frame = +3

Query  949   PASSPQLSHDDTHSRIEHYASR  970
             P SSPQLSHDDTH+RIEHYA+R
Sbjct  1716  PGSSPQLSHDDTHTRIEHYANR  1781


>ref|XM_002245696.1| Branchiostoma floridae hypothetical protein (BRAFLDRAFT_131875) 
mRNA, complete cds
Length=1915

 Score =  150 bits (379),  Expect = 5e-33, Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 204/454 (44%), Gaps = 81/454 (17%)
 Frame = +1

Query  742   GIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEP  801
              + ++C   L DK RY+F Q++ S G     +    L +++ +P  + E  SFG +  E 
Sbjct  4     ALSTMCAGKLVDKLRYIFSQISDSRGQLVYPKFDQFLQEALALPSAVYEGPSFGYN--ET  177

Query  802   SVRSCFQFANNKPEIEAALFLDWMRLEPQ--SMVWLPVLHRVAAAETAKHQAKCNICKEC  859
             + +SCFQ A     +    FLD M  +P    +VWLP++HR+A  E  +    C  C+  
Sbjct  178   AAKSCFQSAQ---RVTINDFLDVMMADPGPPCLVWLPLMHRMANVENVE----CAYCQRE  336

Query  860   PIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNK  919
              ++GFRY+  + FNY +CQ+CF+ G  +  H   + M EY   ++     + F   LK  
Sbjct  337   SMMGFRYKCQRCFNYQLCQNCFWRGYTSGNHTTDHEMKEY---SSWKSPAKQFGHALKKS  507

Query  920   FRT--KRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDD---THSRIEHYASRLAEM  974
             FR   K     HPR    P QT L+  N+  P+  P L+++    T    EH        
Sbjct  508   FRCVPKHAEPNHPRFPDEPEQT-LDLSNIVPPSPPPALANESALATSISSEHTTP-----  669

Query  975   ENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQD-----------SP-LSQPRSPA-QI  1021
               +  ++  D++     +DDEH LI  Y   L  +           SP L Q RSP  ++
Sbjct  670   --TKRAFPVDTMDSTTRMDDEHRLIARYAARLAAEQNEQNTTPVDVSPLLHQSRSPGTEL  843

Query  1022  LISLESEER-----GELER--------------------ILADLEEENRNLQAEYDRLKQ  1056
              ++L++  +      ELE                     +L++ + +NR +  E  RL+Q
Sbjct  844   ALNLDANRQQRELIAELEHKNSPREVAEKLAQWLREQTDLLSECQHKNREIMREIQRLRQ  1023

Query  1057  QHEH--KGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLE  1114
             +H+   +G+                 R+  L+AE +LLRQ K  LE RM  L++  ++L 
Sbjct  1024  EHDEASRGM--------------DESRNPTLLAELRLLRQRKDELELRMSALQESRRELM  1161

Query  1115  SQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRS  1148
              QL  L +LL+   +      T   SP T   +S
Sbjct  1162  VQLEGLMKLLKSHGSSPTPRSTPGGSPLTGSAKS  1263


>gb|EF120476.1| Schistosoma bovis dystrophin mRNA, partial cds
Length=3107

 Score =  149 bits (377),  Expect = 7e-33, Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 96/162 (59%), Gaps = 16/162 (9%)
 Frame = +1

Query  711   VPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCD  770
             V +CVD+ LNWLLNVYD  R G IRVLSFK  +  +  A+L++KYRYLF  ++   G  D
Sbjct  721   VNVCVDLILNWLLNVYDRMRCGTIRVLSFKVALALMSMANLDEKYRYLFSLISDRDGCVD  900

Query  771   QRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQ----------------FANNKP  814
             ++RLG LL++ + IPR LGE   FG  +    V++CFQ                  ++KP
Sbjct  901   EQRLGALLYECVLIPRNLGETGQFGNEDFNQYVKTCFQQVLEISKHSDKIDGTLTYHSKP  1080

Query  815   EIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNIC  856
                   FL W+RL PQ + WLP+LHR+A +E   H  +C++C
Sbjct  1081  TARIVHFLTWLRLNPQMLTWLPLLHRLALSEPVIHHIRCSVC  1206


>emb|AJ544616.1| Takifugu rubripes dmd gene for putative dystrophin, exons 67-73
Length=14923

 Score =  149 bits (377),  Expect = 8e-33, Method: Compositional matrix adjust.
 Identities = 73/123 (59%), Positives = 85/123 (69%), Gaps = 27/123 (21%)
 Frame = +1

Query  661   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
             +DLLS+  AC+  DQH LKQN+Q +DI Q++ CLT++Y RLEQ H++LVNVPLCVDMCLN
Sbjct  8218  VDLLSMPLACEVFDQHGLKQNEQLLDISQLVTCLTSLYQRLEQSHSHLVNVPLCVDMCLN  8397

Query  721   WLLNVYDT---------------------------GRTGRIRVLSFKTGIISLCKAHLED  753
             WLLNVYDT                           GRTG+IR LSFKTGIISLCKAHLED
Sbjct  8398  WLLNVYDTYDWHTQAFLARLGVLVLIFGFCFVLGSGRTGKIRTLSFKTGIISLCKAHLED  8577

Query  754   KYR  756
             KYR
Sbjct  8578  KYR  8586


 Score =  128 bits (321),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 59/72 (81%), Positives = 63/72 (87%), Gaps = 1/72 (1%)
 Frame = +2

Query  803    VRSCFQF-ANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  861
              V  CF   ANNKPE+EAA+FLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI
Sbjct  12350  VVICFCIQANNKPELEAAMFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI  12529

Query  862    IGFRYRSLKHFN  873
              IGFR   L H++
Sbjct  12530  IGFRSVELPHYS  12565


 Score =  112 bits (281),  Expect = 9e-22, Method: Compositional matrix adjust.
 Identities = 51/57 (89%), Positives = 53/57 (92%), Gaps = 0/57 (0%)
 Frame = +2

Query  758    LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKP  814
              LF+QVAS+TGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQF    P
Sbjct  9836   LFRQVASATGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFVRRAP  10006


 Score = 93.2 bits (230),  Expect = 8e-16, Method: Composition-based stats.
 Identities = 39/47 (82%), Positives = 40/47 (85%), Gaps = 0/47 (0%)
 Frame = +2

Query  865    RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRD  911
              RYRSLKHFNYDICQSCFFSGRVAKGHKM YPMVEYCTP     DV +
Sbjct  14447  RYRSLKHFNYDICQSCFFSGRVAKGHKMQYPMVEYCTPV*MPPDVSN  14587


 Score = 54.3 bits (129),  Expect(2) = 7e-12, Method: Compositional matrix adjust.
 Identities = 25/26 (96%), Positives = 25/26 (96%), Gaps = 0/26 (0%)
 Frame = +1

Query  636   ADLNNVRFSAYRTAMKLRRLQKALCL  661
             ADLNNVRFSAYRTAMKLRRLQKALC 
Sbjct  7423  ADLNNVRFSAYRTAMKLRRLQKALCC  7500


 Score = 45.8 bits (107),  Expect(2) = 7e-12, Method: Compositional matrix adjust.
 Identities = 18/22 (81%), Positives = 20/22 (90%), Gaps = 0/22 (0%)
 Frame = +3

Query  615   NHETQTTCWDHPKMTELYQSLA  636
             +H+TQTTCWDHPKM ELYQSL 
Sbjct  7257  SHQTQTTCWDHPKMAELYQSLG  7322


>gb|EF120477.1| Schistosoma haematobium dystrophin mRNA, partial cds
Length=3104

 Score =  149 bits (377),  Expect = 8e-33, Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 96/162 (59%), Gaps = 16/162 (9%)
 Frame = +1

Query  711   VPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCD  770
             V +CVD+ LNWLLNVYD  R G IRVLSFK  +  +  A+L++KYRYLF  ++   G  D
Sbjct  721   VNVCVDLILNWLLNVYDRMRCGTIRVLSFKVALALMSMANLDEKYRYLFSLISDRDGCVD  900

Query  771   QRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQ----------------FANNKP  814
             ++RLG LL++ + IPR LGE   FG  +    V++CFQ                  ++KP
Sbjct  901   EQRLGALLYECVLIPRNLGETGQFGNEDFNQYVKTCFQQVLEISKHSDKIDGTLTYHSKP  1080

Query  815   EIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNIC  856
                   FL W+RL PQ + WLP+LHR+A +E   H  +C++C
Sbjct  1081  TARIVHFLTWLRLNPQMLTWLPLLHRLALSEQVIHHIRCSVC  1206


>gb|AC093167.11| Homo sapiens Xp BAC RP11-593P4 (Roswell Park Cancer Institute 
Human BAC Library) complete sequence
Length=75001

 Score =  146 bits (368),  Expect = 9e-32, Method: Compositional matrix adjust.
 Identities = 72/76 (94%), Positives = 73/76 (96%), Gaps = 0/76 (0%)
 Frame = -3

Query  94     IERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTV  153
              +ERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTV
Sbjct  19430  VERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTV  19251

Query  154    DAIQKKITETKQLAKD  169
              DAIQKKITETK   KD
Sbjct  19250  DAIQKKITETKVSIKD  19203


 Score = 79.3 bits (194),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 39/40 (97%), Positives = 40/40 (100%), Gaps = 0/40 (0%)
 Frame = -2

Query  54     KATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR  93
              +ATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR
Sbjct  69594  QATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR  69475


>gb|AF213438.1|AF213438 Homo sapiens dystrophin (DMD) gene, exon 53 and partial cds
Length=677

 Score =  146 bits (368),  Expect = 9e-32, Method: Compositional matrix adjust.
 Identities = 72/76 (94%), Positives = 73/76 (96%), Gaps = 0/76 (0%)
 Frame = +1

Query  94   IERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTV  153
            +ERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTV
Sbjct  277  VERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTV  456

Query  154  DAIQKKITETKQLAKD  169
            DAIQKKITETK   KD
Sbjct  457  DAIQKKITETKVSIKD  504


>gb|AC193238.3| Pan troglodytes BAC clone CH251-308A5 from chromosome x, complete 
sequence
Length=177586

 Score =  145 bits (366),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 71/76 (93%), Positives = 73/76 (96%), Gaps = 0/76 (0%)
 Frame = -2

Query  94      IERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTV  153
               +ERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYT+
Sbjct  117393  VERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTI  117214

Query  154     DAIQKKITETKQLAKD  169
               DAIQKKITETK   KD
Sbjct  117213  DAIQKKITETKVSIKD  117166


 Score =  129 bits (323),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 67/74 (90%), Positives = 68/74 (91%), Gaps = 0/74 (0%)
 Frame = -1

Query  206    INASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  265
              I AS   +  RVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL
Sbjct  64156  IIASEHLVLCRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  63977

Query  266    EDSKGVKELMKQWQ  279
              EDSKGVKELMKQWQ
Sbjct  63976  EDSKGVKELMKQWQ  63935


 Score =  104 bits (259),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 50/52 (96%), Positives = 50/52 (96%), Gaps = 0/52 (0%)
 Frame = -2

Query  165    QLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKR  216
              QLAKDLRQWQ NVDVANDLALKLLRDYSADDTRKVHMITENINASW SIHKR
Sbjct  94374  QLAKDLRQWQINVDVANDLALKLLRDYSADDTRKVHMITENINASWGSIHKR  94219


 Score = 79.3 bits (194),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 39/40 (97%), Positives = 40/40 (100%), Gaps = 0/40 (0%)
 Frame = -2

Query  54      KATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR  93
               +ATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR
Sbjct  167313  QATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR  167194


>emb|CT476801.2| RP43-004N07, complete sequence
Length=182257

 Score =  145 bits (366),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 71/76 (93%), Positives = 73/76 (96%), Gaps = 0/76 (0%)
 Frame = -3

Query  94      IERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTV  153
               +ERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYT+
Sbjct  122201  VERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTI  122022

Query  154     DAIQKKITETKQLAKD  169
               DAIQKKITETK   KD
Sbjct  122021  DAIQKKITETKVSIKD  121974


 Score =  129 bits (323),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 67/74 (90%), Positives = 68/74 (91%), Gaps = 0/74 (0%)
 Frame = -3

Query  206    INASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  265
              I AS   +  RVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL
Sbjct  68960  IIASEHLVLCRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  68781

Query  266    EDSKGVKELMKQWQ  279
              EDSKGVKELMKQWQ
Sbjct  68780  EDSKGVKELMKQWQ  68739


 Score =  104 bits (259),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 50/52 (96%), Positives = 50/52 (96%), Gaps = 0/52 (0%)
 Frame = -1

Query  165    QLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKR  216
              QLAKDLRQWQ NVDVANDLALKLLRDYSADDTRKVHMITENINASW SIHKR
Sbjct  99178  QLAKDLRQWQINVDVANDLALKLLRDYSADDTRKVHMITENINASWGSIHKR  99023


 Score = 79.3 bits (194),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 39/40 (97%), Positives = 40/40 (100%), Gaps = 0/40 (0%)
 Frame = -2

Query  54      KATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR  93
               +ATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR
Sbjct  172137  QATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR  172018


>emb|CR972866.3| RP43-009N23, complete sequence
Length=201804

 Score =  145 bits (366),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 71/76 (93%), Positives = 73/76 (96%), Gaps = 0/76 (0%)
 Frame = -1

Query  94      IERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTV  153
               +ERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYT+
Sbjct  145938  VERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTI  145759

Query  154     DAIQKKITETKQLAKD  169
               DAIQKKITETK   KD
Sbjct  145758  DAIQKKITETKVSIKD  145711


 Score =  129 bits (323),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 67/74 (90%), Positives = 68/74 (91%), Gaps = 0/74 (0%)
 Frame = -1

Query  206    INASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  265
              I AS   +  RVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL
Sbjct  92697  IIASEHLVLCRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  92518

Query  266    EDSKGVKELMKQWQ  279
              EDSKGVKELMKQWQ
Sbjct  92517  EDSKGVKELMKQWQ  92476


 Score =  104 bits (259),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 50/52 (96%), Positives = 50/52 (96%), Gaps = 0/52 (0%)
 Frame = -2

Query  165     QLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKR  216
               QLAKDLRQWQ NVDVANDLALKLLRDYSADDTRKVHMITENINASW SIHKR
Sbjct  122915  QLAKDLRQWQINVDVANDLALKLLRDYSADDTRKVHMITENINASWGSIHKR  122760


 Score = 79.3 bits (194),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 39/40 (97%), Positives = 40/40 (100%), Gaps = 0/40 (0%)
 Frame = -3

Query  54      KATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR  93
               +ATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR
Sbjct  195874  QATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR  195755


>emb|CT485784.2| RP43-026J01, complete sequence
Length=201375

 Score =  145 bits (366),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 71/76 (93%), Positives = 73/76 (96%), Gaps = 0/76 (0%)
 Frame = -2

Query  94      IERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTV  153
               +ERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYT+
Sbjct  108317  VERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTI  108138

Query  154     DAIQKKITETKQLAKD  169
               DAIQKKITETK   KD
Sbjct  108137  DAIQKKITETKVSIKD  108090


 Score =  129 bits (323),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 67/74 (90%), Positives = 68/74 (91%), Gaps = 0/74 (0%)
 Frame = -2

Query  206    INASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  265
              I AS   +  RVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL
Sbjct  55076  IIASEHLVLCRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  54897

Query  266    EDSKGVKELMKQWQ  279
              EDSKGVKELMKQWQ
Sbjct  54896  EDSKGVKELMKQWQ  54855


 Score =  104 bits (259),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 50/52 (96%), Positives = 50/52 (96%), Gaps = 0/52 (0%)
 Frame = -3

Query  165    QLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKR  216
              QLAKDLRQWQ NVDVANDLALKLLRDYSADDTRKVHMITENINASW SIHKR
Sbjct  85294  QLAKDLRQWQINVDVANDLALKLLRDYSADDTRKVHMITENINASWGSIHKR  85139


 Score = 79.3 bits (194),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 39/40 (97%), Positives = 40/40 (100%), Gaps = 0/40 (0%)
 Frame = -1

Query  54      KATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR  93
               +ATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR
Sbjct  158253  QATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR  158134


>ref|XM_002017724.1| Drosophila persimilis GL17134 (Dper\GL17134), mRNA
Length=2451

 Score =  144 bits (364),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 209/466 (44%), Gaps = 47/466 (10%)
 Frame = +1

Query  635   LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIIN  692
             L   +++RF++YRTA KLR +QK+  L L+ +    +A  ++ L   +    + + ++  
Sbjct  43    LQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSEVSVARLET  222

Query  693   CLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
              ++++Y  L +       VP+     + LNWLL  Y +  +G+IRV S K  + ++C   
Sbjct  223   LVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAYTSDNSGKIRVFSIKVALATMCSGK  402

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             L DK RY+F Q++   G     +LG  L + + +P  + E  +F   + +  +      A
Sbjct  403   LVDKLRYIFSQISDGAGQLVAWKLGEFLREVLALPAAVYESPTF---HYKEGLEEEIFPA  573

Query  811   NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
              NK  +   +        P  +VWLP+LHR+A  ET  H   C++C +    GFRYR  +
Sbjct  574   ENKVTVNDFMATLMSEPGPSCLVWLPLLHRLATVETIVHPTICSVCHKENFTGFRYRCQR  753

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRT--KRYFAK  928
                Y +CQ CF+ G+ +  H+  + + EY +  +  + +      L+  FR   ++    
Sbjct  754   CHAYQLCQECFWHGKTSLNHQNDHEVKEYSSYKSPSKQI---GHSLRKSFRCVPEKTTQV  924

Query  929   HPRMGYLPVQTVLEGDNMETPASSPQLSH----DDTHSRIEHYASRLAEMENSNGSYLND  984
              PR    P +T L   ++  P  SP  SH    D T +    +   L        S L D
Sbjct  925   LPRFPDQPEKT-LNLSHIVPP--SPLPSHNGFNDPTLALAGVHHGHLPPGIFDRSSTL-D  1092

Query  985   SISPNESI-------------------------DDEHLLIQHYCQSLNQDSPLSQPRSPA  1019
             S +   SI                         D+EH LI  Y   L Q++    P + +
Sbjct  1093  SRATGRSIDSANCTGGGGGGGTTISRLAAASANDEEHRLIARYAARLAQEN--RAPSNMS  1266

Query  1020  QILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSP  1065
             +    + ++       ++A LE +N+ +  E  RL++Q E + ++P
Sbjct  1267  ESATPIGTDNSRAQRELIAQLESKNKEIMREIARLRRQQETEQMAP  1404


>gb|AC193178.3| Pan troglodytes BAC clone CH251-299A18 from chromosome x, complete 
sequence
Length=168302

 Score =  143 bits (360),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 67/68 (98%), Positives = 68/68 (100%), Gaps = 0/68 (0%)
 Frame = -2

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              +DLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  47995  VDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  47816

Query  721    WLLNVYDT  728
              WLLNVYDT
Sbjct  47815  WLLNVYDT  47792


 Score =  132 bits (331),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 62/74 (83%), Positives = 63/74 (85%), Gaps = 0/74 (0%)
 Frame = -3

Query  793    SFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAK  852
              SF  S   PS+      ANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAK
Sbjct  21408  SFLSSFCPPSLSLLSLQANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAK  21229

Query  853    CNICKECPIIGFRY  866
              CNICKECPIIGFRY
Sbjct  21228  CNICKECPIIGFRY  21187


 Score =  115 bits (288),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 53/58 (91%), Positives = 54/58 (93%), Gaps = 0/58 (0%)
 Frame = -1

Query  758    LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPE  815
              LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQF +  P 
Sbjct  42425  LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFVSYSPS  42252


 Score =  107 bits (268),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 54/55 (98%), Positives = 54/55 (98%), Gaps = 0/55 (0%)
 Frame = -3

Query  991   SIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  1045
             S DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR
Sbjct  8157  SRDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  7993


 Score =  102 bits (253),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 48/61 (78%), Positives = 53/61 (86%), Gaps = 5/61 (8%)
 Frame = -3

Query  893    HYPMVEYCTP-----TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME  947
              ++P++   +P     TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME
Sbjct  17301  NHPVLNLISP*SPF*TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME  17122

Query  948    T  948
              T
Sbjct  17121  T  17119


 Score = 92.8 bits (229),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 38/40 (95%), Positives = 39/40 (97%), Gaps = 0/40 (0%)
 Frame = -2

Query  865    RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTT  904
              RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTP +
Sbjct  18934  RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPVS  18815


 Score = 63.5 bits (153),  Expect = 6e-07, Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 32/34 (94%), Gaps = 0/34 (0%)
 Frame = -3

Query  723    LNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYR  756
              L +++ GRTGRIRVLSFKTGIISLCKAHLEDKYR
Sbjct  44982  LILHNRGRTGRIRVLSFKTGIISLCKAHLEDKYR  44881


 Score = 54.3 bits (129),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 25/25 (100%), Positives = 25/25 (100%), Gaps = 0/25 (0%)
 Frame = -2

Query  636    ADLNNVRFSAYRTAMKLRRLQKALC  660
              ADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  61363  ADLNNVRFSAYRTAMKLRRLQKALC  61289


 Score = 52.8 bits (125),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 21/24 (87%), Positives = 22/24 (91%), Gaps = 0/24 (0%)
 Frame = -3

Query  613    YINHETQTTCWDHPKMTELYQSLA  636
              Y +HETQTTCWDHPKMTELYQSL 
Sbjct  98385  YFSHETQTTCWDHPKMTELYQSLG  98314


 Score = 52.8 bits (125),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 28/32 (87%), Gaps = 0/32 (0%)
 Frame = -1

Query  970    RLAEMENSNGSYLNDSISPNESIDDEHLLIQH  1001
              RLAEMENSNGSYLNDSISPNES+   HL +Q+
Sbjct  10958  RLAEMENSNGSYLNDSISPNESM*VSHLFLQN  10863


 Score = 50.8 bits (120),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 21/23 (91%), Positives = 21/23 (91%), Gaps = 0/23 (0%)
 Frame = -3

Query  592     FLSTSVQGPWERAISPNKVPYYI  614
               F S SVQGPWERAISPNKVPYYI
Sbjct  161502  FFSASVQGPWERAISPNKVPYYI  161434


 Score = 48.9 bits (115),  Expect = 0.019, Method: Compositional matrix adjust.
 Identities = 22/23 (95%), Positives = 22/23 (95%), Gaps = 0/23 (0%)
 Frame = -1

Query  949    PASSPQLSHDDTHSRIEHYASRL  971
              PASSPQLSHDDTHSRIEHYASR 
Sbjct  12143  PASSPQLSHDDTHSRIEHYASRY  12075


>emb|CU302226.2| CH251-299A18, complete sequence
Length=168302

 Score =  143 bits (360),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 67/68 (98%), Positives = 68/68 (100%), Gaps = 0/68 (0%)
 Frame = +2

Query  661     LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
               +DLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  120308  VDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  120487

Query  721     WLLNVYDT  728
               WLLNVYDT
Sbjct  120488  WLLNVYDT  120511


 Score =  132 bits (331),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 62/74 (83%), Positives = 63/74 (85%), Gaps = 0/74 (0%)
 Frame = +3

Query  793     SFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAK  852
               SF  S   PS+      ANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAK
Sbjct  146895  SFLSSFCPPSLSLLSLQANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAK  147074

Query  853     CNICKECPIIGFRY  866
               CNICKECPIIGFRY
Sbjct  147075  CNICKECPIIGFRY  147116


 Score =  115 bits (288),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 53/58 (91%), Positives = 54/58 (93%), Gaps = 0/58 (0%)
 Frame = +1

Query  758     LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPE  815
               LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQF +  P 
Sbjct  125878  LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFVSYSPS  126051


 Score =  107 bits (268),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 54/55 (98%), Positives = 54/55 (98%), Gaps = 0/55 (0%)
 Frame = +3

Query  991     SIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  1045
               S DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR
Sbjct  160146  SRDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  160310


 Score =  102 bits (253),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 48/61 (78%), Positives = 53/61 (86%), Gaps = 5/61 (8%)
 Frame = +3

Query  893     HYPMVEYCTP-----TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME  947
               ++P++   +P     TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME
Sbjct  151002  NHPVLNLISP*SPF*TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME  151181

Query  948     T  948
               T
Sbjct  151182  T  151184


 Score = 92.8 bits (229),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 38/40 (95%), Positives = 39/40 (97%), Gaps = 0/40 (0%)
 Frame = +2

Query  865     RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTT  904
               RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTP +
Sbjct  149369  RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPVS  149488


 Score = 63.5 bits (153),  Expect = 6e-07, Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 32/34 (94%), Gaps = 0/34 (0%)
 Frame = +3

Query  723     LNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYR  756
               L +++ GRTGRIRVLSFKTGIISLCKAHLEDKYR
Sbjct  123321  LILHNRGRTGRIRVLSFKTGIISLCKAHLEDKYR  123422


 Score = 54.3 bits (129),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 25/25 (100%), Positives = 25/25 (100%), Gaps = 0/25 (0%)
 Frame = +2

Query  636     ADLNNVRFSAYRTAMKLRRLQKALC  660
               ADLNNVRFSAYRTAMKLRRLQKALC
Sbjct  106940  ADLNNVRFSAYRTAMKLRRLQKALC  107014


 Score = 52.8 bits (125),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 21/24 (87%), Positives = 22/24 (91%), Gaps = 0/24 (0%)
 Frame = +3

Query  613    YINHETQTTCWDHPKMTELYQSLA  636
              Y +HETQTTCWDHPKMTELYQSL 
Sbjct  69918  YFSHETQTTCWDHPKMTELYQSLG  69989


 Score = 52.8 bits (125),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 28/32 (87%), Gaps = 0/32 (0%)
 Frame = +1

Query  970     RLAEMENSNGSYLNDSISPNESIDDEHLLIQH  1001
               RLAEMENSNGSYLNDSISPNES+   HL +Q+
Sbjct  157345  RLAEMENSNGSYLNDSISPNESM*VSHLFLQN  157440


 Score = 50.8 bits (120),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 21/23 (91%), Positives = 21/23 (91%), Gaps = 0/23 (0%)
 Frame = +3

Query  592   FLSTSVQGPWERAISPNKVPYYI  614
             F S SVQGPWERAISPNKVPYYI
Sbjct  6801  FFSASVQGPWERAISPNKVPYYI  6869


 Score = 48.9 bits (115),  Expect = 0.019, Method: Compositional matrix adjust.
 Identities = 22/23 (95%), Positives = 22/23 (95%), Gaps = 0/23 (0%)
 Frame = +1

Query  949     PASSPQLSHDDTHSRIEHYASRL  971
               PASSPQLSHDDTHSRIEHYASR 
Sbjct  156160  PASSPQLSHDDTHSRIEHYASRY  156228


>gb|BC150093.1| Bos taurus cDNA clone IMAGE:8324137
Length=2369

 Score =  142 bits (358),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 144/271 (53%), Gaps = 15/271 (5%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  217   NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHSTEISVSRLETVI  396

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  397   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  570

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  571   MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  738

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR 
Sbjct  739   -QQKKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRC  915

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEY  899
              +  NY +CQ+CF+ G  +  H   + M E+
Sbjct  916   QQCHNYQLCQNCFWRGHASGPHSNQHQMKEH  1008


>ref|XM_001918076.1| PREDICTED: Equus caballus dystrotelin (DYTN), mRNA
Length=1713

 Score =  142 bits (358),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 97/263 (36%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
 Frame = +1

Query  644  SAYRTAMKLRRLQKALCLDLLSLSAACDAL-DQHNLKQNDQPMDILQIINCLTTIYDRLE  702
            S YRTA KLR +Q    LDL+  S     L  Q   +  + P  + Q++  L  ++ R+ 
Sbjct  43   SIYRTAFKLRSVQTLCQLDLVHSSLIRHVLLRQCFWEARESPFSVQQLLQTLQELFRRVS  222

Query  703  QEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQV  762
             E+   V+ P   ++ L+ L  +YD+ RT  +++      +I+L       KYR LF+  
Sbjct  223  VENPGQVH-PRASELTLSLLTALYDSTRTSFVKLTPAAAALIALSGDSPLTKYRALFQLY  399

Query  763  ASST-GFCD------QRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPE  815
            A S  G  D      +R L  LL D  QIP  +GE  S   S++E +VRSCFQ   + P 
Sbjct  400  AGSYRGANDSGARMTRRVLRNLLVDLQQIPTVVGE--SRVPSSVESAVRSCFQGVLS-PA  570

Query  816  IEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYD  875
            I+   FL W++ EP  + WLP  HR++A ET    A+C IC++ PI G RY  LK  N+D
Sbjct  571  IKEEKFLSWLQAEPPILQWLPTCHRLSATETVTRPARCGICRDFPITGLRYHCLKCLNFD  750

Query  876  ICQSCFFSGRVAKGHKMHYPMVE  898
            ICQ CF SG   K H +  P V+
Sbjct  751  ICQVCFLSGLHTKAHPVTEPRVQ  819


>gb|M86889.1|HUMDYST06 H.sapiens dystrophin gene, exon 65
Length=351

 Score =  142 bits (357),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 67/68 (98%), Positives = 68/68 (100%), Gaps = 0/68 (0%)
 Frame = +3

Query  661  LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
            +DLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN
Sbjct  99   VDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  278

Query  721  WLLNVYDT  728
            WLLNVYDT
Sbjct  279  WLLNVYDT  302


>dbj|AK083752.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length 
enriched library, clone:D030074O22 product:dystrobrevin, beta, 
full insert sequence
Length=3768

 Score =  141 bits (356),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 145/271 (53%), Gaps = 15/271 (5%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  290   NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHSTEISVSRLETVI  469

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  470   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMVAAYDSEGRGKLTVFSVKAMLATMCGGK  643

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             + DK RY+F Q++ S G     +L   L +++++P  + E  SFG +  E +VR+CF   
Sbjct  644   MLDKLRYIFSQMSDSNGLMMFGKLDQFLKEALKLPTAVFEGPSFGYT--EHAVRTCFP--  811

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C    ++GFRYR 
Sbjct  812   -QQKKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCHCESMMGFRYRC  988

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEY  899
              +  NY +CQ+CF+ G  +  H   + M E+
Sbjct  989   QQCHNYQLCQNCFWRGHASGAHSNQHQMKEH  1081


>gb|BC078203.1| Danio rerio dystrobrevin, gamma, mRNA (cDNA clone IMAGE:7152475), 
partial cds
Length=1275

 Score =  141 bits (356),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 141/271 (52%), Gaps = 15/271 (5%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDI----LQIIN  692
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I    L+ I 
Sbjct  304   NYDTIRLSTYRTACKLRFVQKKCNLHLVDVWNMIEAFRDNGLNTLDVCTEISVARLETI-  480

Query  693   CLTTIYDRLEQE--HNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
              LT IY +L +     + ++V     + LN++   +DT   GR+ V S K  +  LC   
Sbjct  481   -LTCIYQQLNKRLPTTHQISVQHNTSLLLNFMATAHDTDAQGRLTVFSVKMMLSVLCGGK  657

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             L DK RY+F Q++ S G  +  +    L +++++P  + E  SFG   ++   RSCF   
Sbjct  658   LVDKLRYIFSQISDSHGAMEMSKFDHFLREALKLPAAVFEGPSFG--YLDHLARSCFP--  825

Query  811   NNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRS  868
               + ++   +FLD +  +P  Q ++WLP++HR+   E   H   C+ C+   + GFRYR 
Sbjct  826   -QQKKVMLNMFLDALMSDPPPQCLIWLPLVHRMGNVENVHHPVSCSFCRSDGMTGFRYRC  1002

Query  869   LKHFNYDICQSCFFSGRVAKGHKMHYPMVEY  899
              + FNY +CQ+CF+ G  +  H  H+ M E+
Sbjct  1003  QQCFNYQLCQNCFWRGHASGNHSNHHDMKEH  1095


>gb|S62620.1| (mdx3Cv)=dystrophin gene {5'region, alternatively spliced} [mice, 
mRNA Partial Mutant, 374 nt]
Length=374

 Score =  140 bits (354),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 66/66 (100%), Positives = 66/66 (100%), Gaps = 0/66 (0%)
 Frame = +3

Query  616  HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQ  675
            HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQ
Sbjct  177  HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQ  356

Query  676  HNLKQN  681
            HNLKQN
Sbjct  357  HNLKQN  374


>ref|XM_002066076.1| Drosophila willistoni GK22187 (Dwil\GK22187), mRNA
Length=2388

 Score =  140 bits (352),  Expect = 7e-30, Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 137/271 (50%), Gaps = 7/271 (2%)
 Frame = +1

Query  635  LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIIN  692
            L   +++RF++YRTA KLR +QK+  L L+ +    +A  ++ L   +Q   + + ++  
Sbjct  43   LQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEQQSEVSVARLET  222

Query  693  CLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
             ++++Y  L +       VP+     + LNWLL  Y +  +G+IRV S K  + ++C   
Sbjct  223  LVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAYTSDNSGKIRVFSIKVALATMCSGK  402

Query  751  LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
            L DK RY+F Q++   G     +L   L + + +P  + E  +F   + +  +      A
Sbjct  403  LVDKLRYIFSQISDGAGQLVAWKLSEFLREVLALPAAVYESPTF---HYKDGLEEEIFPA  573

Query  811  NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             NK  +   +        P  +VWLP+LHR+A  ET  H   C++C +    GFRYR  +
Sbjct  574  ENKVTVNDFMATLMSEPGPSCLVWLPLLHRLATVETIVHPTICSVCHKENFTGFRYRCQR  753

Query  871  HFNYDICQSCFFSGRVAKGHKMHYPMVEYCT  901
               Y +CQ CF+ G+ +  H+  + + EY +
Sbjct  754  CHAYQLCQECFWHGKTSLNHQNDHEVKEYSS  846


>gb|AF043067.1|AF043067 Gallus gallus dystrophin mRNA, alternatively spliced, partial 
cds
Length=216

 Score =  139 bits (349),  Expect = 1e-29, Method: Composition-based stats.
 Identities = 72/94 (76%), Positives = 72/94 (76%), Gaps = 22/94 (23%)
 Frame = +1

Query  898  EYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSH  957
            EYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET         
Sbjct  1    EYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET---------  153

Query  958  DDTHSRIEHYASRLAEMENSNGSYLNDSISPNES  991
                         LAEMENSNGSYLNDSISPNES
Sbjct  154  -------------LAEMENSNGSYLNDSISPNES  216


>emb|AJ720148.1| Gallus gallus mRNA for hypothetical protein, clone 11i20
Length=4001

 Score =  138 bits (347),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 147/284 (51%), Gaps = 28/284 (9%)
 Frame = +3

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             + + +R S YRTA KLR +QK   L L+ +    +A   + L   D    +++ ++   +
Sbjct  243   NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHNTEINVSRLETII  422

Query  695   TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDT-----GRT--------GRIRVL  737
             ++IY     RL   H   ++V   + + LN+++  YD+     GR         G++ V 
Sbjct  423   SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSTQ*GGGRG*PTVSEGHGKLTVF  596

Query  738   SFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGS  797
             S K  + ++C   + DK RY+F Q++ S G     +    L + +++P  + E  SFG +
Sbjct  597   SVKAMLATMCGGKILDKLRYIFSQISDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT  776

Query  798   NIEPSVRSCFQFANNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNI  855
               E SVR+CF     + +I   +FLD +  +P  Q +VWLP++HR+A  E   H  +C+ 
Sbjct  777   --EHSVRTCFP---QQKKITLNMFLDTLMADPPPQCLVWLPLMHRLAHVENVFHPVECSY  941

Query  856   CKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEY  899
             C+   ++GFRYR  +  NY +CQ+CF+ G  +  H   + M E+
Sbjct  942   CRCESMMGFRYRCQQCHNYQLCQNCFWRGHASGPHSNQHQMKEH  1073


>gb|BT011443.1| Drosophila melanogaster RE48865 full insert cDNA
Length=3395

 Score =  137 bits (346),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 144/291 (49%), Gaps = 10/291 (3%)
 Frame = +3

Query  635   LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIIN  692
             L   +++RF++YRTA KLR +QK+  L L+ +    +A  ++ L   +    + + ++  
Sbjct  606   LQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSEVSVARLET  785

Query  693   CLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
              ++++Y  L +       VP+     + LNWLL  Y +  +G+IRV S K  + ++C   
Sbjct  786   LVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAYTSDNSGKIRVFSIKVALATMCSGK  965

Query  751   LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             L DK RY+F Q++   G     +LG  L + + +P  + E  +F   + +  +      A
Sbjct  966   LVDKLRYIFSQISDGAGQLVAWKLGEFLREVLALPAAVYESPTF---HYKEGLEEEIFPA  1136

Query  811   NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
              NK  +   +        P  +VWLP++HR+A  ET  H   C++C +    GFRYR  +
Sbjct  1137  ENKVTVNDFMATLMSEPGPSCLVWLPLVHRLATVETIVHPTVCSVCHKENFTGFRYRCQR  1316

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
                Y +CQ CF+ G+ +  H+  + + EY +  +  + +      L+  FR
Sbjct  1317  CHAYQLCQECFWHGKTSLNHQNDHEVKEYSSYKSPSKQI---GHSLRKSFR  1460


>gb|AF533682.1| Homo sapiens IL1RAPL1/dystrophin fusion protein mRNA, partial 
cds
Length=400

 Score =  137 bits (346),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 68/73 (93%), Positives = 70/73 (95%), Gaps = 0/73 (0%)
 Frame = +2

Query  88   TIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWK  147
            T +T  +ERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWK
Sbjct  182  TELTVTVERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWK  361

Query  148  EGPYTVDAIQKKI  160
            EGPYTVDAIQKKI
Sbjct  362  EGPYTVDAIQKKI  400


>gb|DQ443726.1| Danio rerio dystrotelin mRNA, complete cds
Length=2092

 Score =  137 bits (346),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 164/349 (46%), Gaps = 46/349 (13%)
 Frame = +2

Query  638   LNNVRFSAYRTAMKLRRLQKALCLDLLSL-------------SAACDALDQHNLKQNDQP  684
             LN VR + YR A+KLR LQK   ++L+ L               +  +L Q +++Q+ + 
Sbjct  62    LNEVRLAVYRAALKLRSLQKLCQMNLVLLQDLRPILNTLWSSGESTISLAQEDVQQHLEE  241

Query  685   MDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGII  744
             +          +I   L  +      V    D     L  ++D G+TG I + S +  +I
Sbjct  242   L--------FRSISPELPDQ-----AVTEATDQTTRLLFKLFDRGQTGVILLRSVEAALI  382

Query  745   SLCKAHLEDKYRYLFKQVASSTGFCDQRR-------LGLLLHDSIQIPRQLGEVASFGGS  797
             +LC   L  K R LF+   S +G  +  R       L +LL D  Q+P  + E   FG  
Sbjct  383   ALCGDTLSAKQRALFRLAESYSGNQESDRGSISRSALRVLLEDLSQVPAVVQENHVFG--  556

Query  798   NIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICK  857
             + E +V SCF    +    E   F+ W++ EP+ ++WL  L+R++ +E  +H+  C+ CK
Sbjct  557   HAETAVSSCFNGVISAGVTEEH-FIWWLQSEPRLLLWLSTLYRISVSEAVQHRVHCHACK  733

Query  858   ECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLK  917
               PI G RYR LK  N  +CQSCF + R ++ HK  + ++EYCT  +  E +   A   +
Sbjct  734   AFPITGLRYRCLKCLNVHLCQSCFLTERRSRKHKPSHSVLEYCTQPSWKESMASLASSAR  913

Query  918   NKFRTKRYFAKHPRMGYLPVQTVLEGDNME--TPASSPQL---SHDDTH  961
             +         +H R      + +  G + E    AS+P L   ++ DTH
Sbjct  914   HAL-----VPRHTRREAERKRALRAGSSAELRYSASNPALQFAAYADTH  1045


>gb|BC118294.1| Bos taurus dystrobrevin, alpha, mRNA (cDNA clone MGC:140020 IMAGE:8286407), 
complete cds
Length=1764

 Score =  137 bits (344),  Expect = 6e-29, Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 143/269 (53%), Gaps = 11/269 (4%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPM--DILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D  M  ++ ++   L
Sbjct  379   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNVDPNMELNVARLEAVL  558

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + + V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  559   STIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  738

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  739   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  903

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  904   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMLGFRYRCQQ  1083

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEY  899
               NY +CQ CF+ G     H   + M EY
Sbjct  1084  CHNYQLCQDCFWRGHAGGSHSNQHQMKEY  1170


>ref|NM_010087.3| Mus musculus dystrobrevin alpha (Dtna), transcript variant 2, 
mRNA
Length=1708

 Score =  135 bits (340),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 144/269 (53%), Gaps = 11/269 (4%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  415   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  594

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  595   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  774

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  775   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  939

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  940   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  1119

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEY  899
               NY +CQ CF+ G     H   + M EY
Sbjct  1120  CHNYQLCQDCFWRGHAGGSHSNQHQMKEY  1206


>dbj|AK003829.2| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length 
enriched library, clone:1110019N08 product:dystrobrevin alpha, 
full insert sequence
Length=1609

 Score =  135 bits (340),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 144/269 (53%), Gaps = 11/269 (4%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  341   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  520

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  521   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  700

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  701   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  865

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  866   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  1045

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEY  899
               NY +CQ CF+ G     H   + M EY
Sbjct  1046  CHNYQLCQDCFWRGHAGGSHSNQHQMKEY  1132


>gb|AF143542.1|AF143542 Mus musculus alpha-dystrobrevin 3 mRNA, complete cds
Length=1593

 Score =  135 bits (340),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 144/269 (53%), Gaps = 11/269 (4%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  320   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVARLEAVL  499

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  500   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  679

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  680   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  844

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  845   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  1024

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEY  899
               NY +CQ CF+ G     H   + M EY
Sbjct  1025  CHNYQLCQDCFWRGHAGGSHSNQHQMKEY  1111


>gb|BT006937.1| Homo sapiens dystrobrevin, alpha mRNA, complete cds
Length=1116

 Score =  135 bits (340),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 144/269 (53%), Gaps = 11/269 (4%)
 Frame = +1

Query  637  DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQND--QPMDILQIINCL  694
            DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  76   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTELNVSRLEAVL  255

Query  695  TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
            +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  256  STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  435

Query  753  DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
            DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  436  DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  600

Query  813  KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
            + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  601  QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  780

Query  871  HFNYDICQSCFFSGRVAKGHKMHYPMVEY  899
              NY +CQ CF+ G     H   + M EY
Sbjct  781  CHNYQLCQDCFWRGHAGGSHSNQHQMKEY  867


>ref|NM_001392.4| Homo sapiens dystrobrevin, alpha (DTNA), transcript variant 7, 
mRNA
Length=1763

 Score =  135 bits (339),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 144/269 (53%), Gaps = 11/269 (4%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQND--QPMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  427   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTELNVSRLEAVL  606

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  607   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  786

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  787   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  951

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  952   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  1131

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEY  899
               NY +CQ CF+ G     H   + M EY
Sbjct  1132  CHNYQLCQDCFWRGHAGGSHSNQHQMKEY  1218


>gb|U26742.1|HSU26742 Human dystrobrevin-delta mRNA, complete cds
Length=1707

 Score =  135 bits (339),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 144/269 (53%), Gaps = 11/269 (4%)
 Frame = +1

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQND--QPMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  400   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTELNVSRLEAVL  579

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  580   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  759

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  760   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  924

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  925   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  1104

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEY  899
               NY +CQ CF+ G     H   + M EY
Sbjct  1105  CHNYQLCQDCFWRGHAGGSHSNQHQMKEY  1191


>gb|EU831619.1| Synthetic construct Homo sapiens clone HAIB:100066648; DKFZo007D0419 
dystrobrevin, alpha protein (DTNA) gene, encodes complete 
protein
Length=1159

 Score =  135 bits (339),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 144/269 (53%), Gaps = 11/269 (4%)
 Frame = +2

Query  637  DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQND--QPMDILQIINCL  694
            DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  98   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTELNVSRLEAVL  277

Query  695  TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
            +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  278  STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  457

Query  753  DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
            DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  458  DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  622

Query  813  KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
            + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  623  QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  802

Query  871  HFNYDICQSCFFSGRVAKGHKMHYPMVEY  899
              NY +CQ CF+ G     H   + M EY
Sbjct  803  CHNYQLCQDCFWRGHAGGSHSNQHQMKEY  889


>emb|AJ009668.1| Homo sapiens mRNA for alpha-dystrobrevin-3
Length=1644

 Score =  135 bits (339),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 144/269 (53%), Gaps = 11/269 (4%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQND--QPMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  335   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRKNALNNLDPNTELNVSRLEAVL  514

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  515   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  694

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  695   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  859

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  860   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  1039

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEY  899
               NY +CQ CF+ G     H   + M EY
Sbjct  1040  CHNYQLCQDCFWRGHAGGSHSNQHQMKEY  1126


>ref|NM_001128175.1| Homo sapiens dystrobrevin, alpha (DTNA), transcript variant 9, 
mRNA
Length=1728

 Score =  134 bits (338),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 144/269 (53%), Gaps = 11/269 (4%)
 Frame = +3

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQND--QPMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  423   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTELNVSRLEAVL  602

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  603   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  782

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  783   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  947

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  948   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  1127

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEY  899
               NY +CQ CF+ G     H   + M EY
Sbjct  1128  CHNYQLCQDCFWRGHAGGSHSNQHQMKEY  1214


>gb|BC005300.1| Homo sapiens dystrobrevin, alpha, mRNA (cDNA clone MGC:12368 
IMAGE:3933795), complete cds
Length=1710

 Score =  134 bits (338),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 144/269 (53%), Gaps = 11/269 (4%)
 Frame = +2

Query  637   DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQND--QPMDILQIINCL  694
             DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  383   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTELNVSRLEAVL  562

Query  695   TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  563   STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  742

Query  753   DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  743   DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  907

Query  813   KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  908   QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  1087

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEY  899
               NY +CQ CF+ G     H   + M EY
Sbjct  1088  CHNYQLCQDCFWRGHAGGSHSNQHQMKEY  1174


>emb|CR611269.1| full-length cDNA clone CS0DN002YF11 of Adult brain of Homo sapiens 
(human)
Length=1481

 Score =  134 bits (337),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 144/269 (53%), Gaps = 11/269 (4%)
 Frame = +2

Query  637  DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQND--QPMDILQIINCL  694
            DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  206  DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTELNVSRLEAVL  385

Query  695  TTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
            +TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   + 
Sbjct  386  STIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIM  565

Query  753  DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
            DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   + 
Sbjct  566  DKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---SQ  730

Query  813  KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
            + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  +
Sbjct  731  QKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQ  910

Query  871  HFNYDICQSCFFSGRVAKGHKMHYPMVEY  899
              NY +CQ CF+ G     H   + M EY
Sbjct  911  CHNYQLCQDCFWRGHAGGSHSNQHQMKEY  997


>gb|BT007812.1| Synthetic construct Homo sapiens dystrobrevin, alpha mRNA, partial 
cds
Length=1116

 Score =  134 bits (337),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 146/270 (54%), Gaps = 13/270 (4%)
 Frame = +1

Query  637  DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQH---NLKQNDQPMDILQIINC  693
            DL+ +R S YRTA KLR +QK   L L+ +    +AL ++   NL  N + +++ ++   
Sbjct  76   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTE-LNVSRLEAV  252

Query  694  LTTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHL  751
            L+TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   +
Sbjct  253  LSTIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKI  432

Query  752  EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN  811
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   +
Sbjct  433  MDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---S  597

Query  812  NKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  869
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  
Sbjct  598  QQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQ  777

Query  870  KHFNYDICQSCFFSGRVAKGHKMHYPMVEY  899
            +  NY +CQ CF+ G     H   + M EY
Sbjct  778  QCHNYQLCQDCFWRGHAGGSHSNQHQMKEY  867


>gb|EU831705.1| Synthetic construct Homo sapiens clone HAIB:100066734; DKFZo003D0420 
dystrobrevin, alpha protein (DTNA) gene, encodes complete 
protein
Length=1159

 Score =  134 bits (337),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 146/270 (54%), Gaps = 13/270 (4%)
 Frame = +2

Query  637  DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQH---NLKQNDQPMDILQIINC  693
            DL+ +R S YRTA KLR +QK   L L+ +    +AL ++   NL  N + +++ ++   
Sbjct  98   DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNTE-LNVSRLEAV  274

Query  694  LTTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHL  751
            L+TI+ +L +     + ++V   + + LN+LL  +D    G+I V + K  + +LC   +
Sbjct  275  LSTIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKI  454

Query  752  EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN  811
             DK RY+F  ++ S+G     R    L + +++P  + E  SFG +  E S RSCF   +
Sbjct  455  MDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYT--EQSARSCF---S  619

Query  812  NKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  869
             + ++    FLD +  +P  Q +VWLP+LHR+A  E   H  +C+ C    ++GFRYR  
Sbjct  620  QQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQ  799

Query  870  KHFNYDICQSCFFSGRVAKGHKMHYPMVEY  899
            +  NY +CQ CF+ G     H   + M EY
Sbjct  800  QCHNYQLCQDCFWRGHAGGSHSNQHQMKEY  889


>ref|XM_426570.2| PREDICTED: Gallus gallus similar to dystrophin-like protein (LOC429012), 
mRNA
Length=1928

 Score =  134 bits (336),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 191/431 (44%), Gaps = 44/431 (10%)
 Frame = +1

Query  694   LTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLED  753
             L  +++R   E    V+ P   +  L+ L  +YD   TG I+  S    +I+L +  L  
Sbjct  4     LKELFERARLEKPGQVD-PRAAEFTLSLLEAMYDRSGTGHIKTRSAAAALIALSRDTLLA  180

Query  754   KYRYLFKQVASSTG---FCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
             KYR  F+  A   G      +  L  LL D  QIP  +GE  +   S +E +  SCF   
Sbjct  181   KYRAFFEFYAVPDGKKALITRSALRGLLTDLNQIPAAVGEGCT--SSCVEIATHSCFHGV  354

Query  811   NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
                  +E   FL W+R  P  + WLP  +R++A E   H+ +C +CK  PI G RYR LK
Sbjct  355   LKSGIVEEK-FLSWLRSGPTLLQWLPTCYRLSATEMVSHRVRCRVCKTFPITGLRYRCLK  531

Query  871   HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKF-----RTK--  923
               N+D+CQ CFF+GR +K HK  +P+VE+C   ++  + + F   ++N       R K  
Sbjct  532   CLNFDLCQVCFFTGRHSKPHKSSHPVVEHCVQMSAKANAKHFLCTVRNNLFQDCCRRKEA  711

Query  924   -----------RYFAKHPRM---GYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYAS  969
                        R+F  H  +     L     L  +N+  P ++P L      S+     +
Sbjct  712   QGGKVLEITEERHFPTHKNILPPAELSASPFLRRENLSLPVNNPILESPKFTSK-----N  876

Query  970   RLAEMENSNGSYL----NDSISPNESIDDEHLLIQHYCQSLNQDS-----PLSQPRSPAQ  1020
             R    +N N S +       I    S + + L +    +S++  S      L++ +   Q
Sbjct  877   RTVLHKNDNNSKILEQGKTKIQAISSFEADVLKMHGSIKSIHNKSRYMKKQLNKWKHKMQ  1056

Query  1021  ILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSP  1080
              L + + ++  ++E  L  L   + NLQ E  ++KQ  E K +    + P         P
Sbjct  1057  FLHNCQEDKSFKIEAKLQSLRASHENLQMELCKMKQ--EVKTVLQSTAHPSFSLCQNMIP  1230

Query  1081  RDAELIAEAKL  1091
              D  ++ E+K+
Sbjct  1231  GDQHVLQESKM  1263


>emb|BX004756.7| Zebrafish DNA sequence from clone CH211-59A4 in linkage group 
1, complete sequence
Length=169530

 Score =  133 bits (335),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 70/160 (43%), Positives = 96/160 (60%), Gaps = 28/160 (17%)
 Frame = -1

Query  389   RAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEK------------LYQEPR-------  429
             +AF+REL  KEPVI  TL+  + FL E P EGL++             Y   R       
Sbjct  6495  QAFRRELGAKEPVINGTLDNAKTFLAEMPREGLKQRPGQKGIAFVLPFYTYSRYNHRL*P  6316

Query  430   ---------ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
                      ++ PEER QNV R+LRK+ E+V   W+ L   S DWQ++++  LERL ELQ
Sbjct  6315  VFLPLM*CADVSPEERVQNVGRILRKEVEDVTVRWKNLGAASVDWQQQLELALERLMELQ  6136

Query  481   EATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKA  520
             +A D+LD KLRQ E +K SW+PVG+LL+D LQ+H+++VK 
Sbjct  6135  DAQDQLDYKLRQTESVKNSWKPVGELLVDDLQNHIDRVKV  6016


 Score = 60.8 bits (146),  Expect(2) = 1e-14, Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 41/53 (77%), Gaps = 0/53 (0%)
 Frame = -2

Query  164    KQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKR  216
              +QL+KDL+QWQT ++V N+LA KLL  Y+ DDT KV  +TE++N +W +I KR
Sbjct  19460  QQLSKDLQQWQTQMNVTNELANKLLTLYADDDTSKVKQMTESMNLAWANIKKR  19302


 Score = 48.9 bits (115),  Expect(2) = 1e-14, Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 0/71 (0%)
 Frame = -3

Query  94     IERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTV  153
              +E++Q  W++    L  R   L  M KDS+ WLEA++  E ++ +A  KLESWK+  ++V
Sbjct  19744  VEKLQAHWEDSHAKLTARVLTLQNMYKDSSDWLEARKRVEPLIKKANEKLESWKKVSHSV  19565

Query  154    DAIQKKITETK  164
              + ++ +  + K
Sbjct  19564  EDLKGQNADVK  19532


 Score = 80.9 bits (198),  Expect = 4e-12, Method: Compositional matrix adjust.
 Identities = 37/67 (55%), Positives = 51/67 (76%), Gaps = 0/67 (0%)
 Frame = -3

Query  271    VKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELR  330
              V +L   WQDLQ EI+AH + YH+LDEN  +I+ SLEG+D+AV+LQ+RLD+M  +W EL 
Sbjct  11248  VCDLF*SWQDLQAEIDAHRETYHSLDENGHRIVSSLEGTDNAVVLQKRLDDMGQRWHELC  11069

Query  331    KKSLNIR  337
               K ++IR
Sbjct  11068  NKVMSIR  11048


 Score = 76.3 bits (186),  Expect = 9e-11, Method: Compositional matrix adjust.
 Identities = 40/63 (63%), Positives = 47/63 (74%), Gaps = 0/63 (0%)
 Frame = -3

Query  217    VSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMK  276
                ++EA LE   R LQ + LDLEKFL WLTEAETTANVLQDAT KE LLE+   V+ L++
Sbjct  17500  AGDKEADLEAGLRQLQHYYLDLEKFLNWLTEAETTANVLQDATFKEGLLENPTTVRHLLE  17321

Query  277    QWQ  279
              QWQ
Sbjct  17320  QWQ  17312


 Score = 70.1 bits (170),  Expect = 8e-09, Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 0/63 (0%)
 Frame = -1

Query  336   IRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKREL  395
             +R +L+A  DQWK LH+SLQELL WLQLK +EL +Q P+GGD P V +Q   H+    ++
Sbjct  9612  LRPYLDAGVDQWKHLHMSLQELLNWLQLKREELEKQKPVGGDVPTVHQQLLTHKVSPGQI  9433

Query  396   KTK  398
             + K
Sbjct  9432  QFK  9424


 Score = 65.5 bits (158),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 38/46 (82%), Gaps = 0/46 (0%)
 Frame = -1

Query  10     PALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKA  55
               AL  FN++WTEL DWL+LLD ++++QRVMVGDL++INEM +K K 
Sbjct  23832  AALDKFNKSWTELDDWLALLDHMVQTQRVMVGDLDEINEMTVKLKV  23695


 Score = 61.6 bits (148),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 0/51 (0%)
 Frame = -3

Query  519   KALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQV  569
             +A + EIAP+++NV+HVN LA       IQLSP NLS ++DLN RW+LLQV
Sbjct  3907  QAFQEEIAPIQDNVNHVNQLASTFRPSDIQLSPDNLSRIDDLNMRWRLLQV  3755


 Score = 54.7 bits (130),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 26/40 (65%), Positives = 32/40 (80%), Gaps = 0/40 (0%)
 Frame = -2

Query  54     KATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR  93
              ++ +QD+EQR PQL + ITAAQNLKNKT+N E R  ITDR
Sbjct  21932  QSALQDMEQRCPQLNKQITAAQNLKNKTNNPETRATITDR  21813


>gb|AC094963.9| Rattus norvegicus X BAC CH230-6L20 (Children's Hospital Oakland 
Research Institute) complete sequence
Length=213440

 Score =  132 bits (331),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 65/75 (86%), Positives = 70/75 (93%), Gaps = 0/75 (0%)
 Frame = +2

Query  94     IERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTV  153
              +ERIQ QWDEVQE LQNRRQQLNEMLKDSTQWLEAKEEAEQV+GQAR KL+SWKEGP+T+
Sbjct  74708  VERIQIQWDEVQEQLQNRRQQLNEMLKDSTQWLEAKEEAEQVIGQARGKLDSWKEGPHTM  74887

Query  154    DAIQKKITETKQLAK  168
              DAIQKKITETK  AK
Sbjct  74888  DAIQKKITETKVSAK  74932


 Score =  117 bits (292),  Expect = 5e-23, Method: Compositional matrix adjust.
 Identities = 57/64 (89%), Positives = 62/64 (96%), Gaps = 0/64 (0%)
 Frame = +3

Query  216     RVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELM  275
               RVSEREAALEET RLLQQFPLDLEKFLAW+TEAETTANVLQDA+RKE+LLEDS+GV+ELM
Sbjct  129282  RVSEREAALEETQRLLQQFPLDLEKFLAWITEAETTANVLQDASRKEKLLEDSRGVRELM  129461

Query  276     KQWQ  279
               K WQ
Sbjct  129462  KPWQ  129473


 Score = 92.0 bits (227),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 46/52 (88%), Positives = 47/52 (90%), Gaps = 0/52 (0%)
 Frame = +1

Query  165    QLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKR  216
              QLAKDLRQ Q NVDVANDLALKLLRDYSADDTRKVHMITENIN SW +I KR
Sbjct  89557  QLAKDLRQRQINVDVANDLALKLLRDYSADDTRKVHMITENINTSWGNILKR  89712


 Score = 78.6 bits (192),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 38/40 (95%), Positives = 40/40 (100%), Gaps = 0/40 (0%)
 Frame = +1

Query  54     KATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR  93
              +AT+QDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR
Sbjct  29866  QATLQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR  29985


>gb|M86892.1|HUMDYST09 H.sapiens dystrophin gene, exon 68
Length=354

 Score =  130 bits (327),  Expect = 5e-27, Method: Composition-based stats.
 Identities = 62/76 (81%), Positives = 65/76 (85%), Gaps = 4/76 (5%)
 Frame = +1

Query  791  VASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQ  850
            ++SFG     PS+      ANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQ
Sbjct  46   LSSFG----PPSLSLLSLQANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQ  213

Query  851  AKCNICKECPIIGFRY  866
            AKCNICKECPIIGFRY
Sbjct  214  AKCNICKECPIIGFRY  261


>gb|DQ443727.1| Mus musculus dystrotelin mRNA, complete cds
Length=2427

 Score =  130 bits (327),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 144/297 (48%), Gaps = 12/297 (4%)
 Frame = +2

Query  636   ADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDAL-DQHNLKQNDQPMDILQIINCL  694
               LN V  S YRTA KLR +Q    LDL+        L    + +  +  + + Q+   L
Sbjct  320   GTLNRVENSVYRTAFKLRSVQTLCQLDLMDSFLIQQVLWRGRSGESTETSISVQQLFQEL  499

Query  695   TTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDK  754
               ++ R    +   V+ P   ++ L+ L+ ++D   +G ++       +++L       K
Sbjct  500   RELFQRTGMGNAAQVH-PRAPELTLSLLMAMFDRTGSGILKRQPVAAALVALSGDSPLTK  676

Query  755   YRYLFKQVA-------SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCF  807
             YR  F+  A        S     +R L  LL D  QIP  +GE  S+    +E ++ SCF
Sbjct  677   YRAFFQLYAEKNRRGDDSQARMTRRVLRALLTDLQQIPTVVGE--SYTLRPVESAIHSCF  850

Query  808   QFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYR  867
             +   +   I+   FL W + EP  ++WLP  +R++AAET  H  +C++C+  PIIG RY 
Sbjct  851   RGVLSS-GIKEEKFLSWAQSEPLVLLWLPTCYRLSAAETVTHPVRCSVCRTFPIIGLRYH  1027

Query  868   SLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKR  924
              LK  ++DIC+ CF SG     H+  + ++E C   ++ E+ +   + L+N    KR
Sbjct  1028  CLKCLDFDICELCFLSGLHKNSHEKSHTVMEECVQMSATENTKLLFRSLRNNLPQKR  1198


>ref|XM_001606073.1| PREDICTED: Nasonia vitripennis similar to ENSANGP00000002882 
(LOC100122516), mRNA
Length=1842

 Score =  130 bits (326),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 0/171 (0%)
 Frame = +1

Query  751  LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
            LE+KY YLF Q+A       +  L  LL +  +I   LGE  ++G   I  S+ +CF   
Sbjct  211  LEEKYGYLFHQLADHNACLSRVALNTLLTNICKITEMLGENVAYGNHLIRTSIDNCFSVT  390

Query  811  NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
                 +  A F  W+  EP  ++W+  L+R+ +AE   H +KC+ CK  PI G RY  LK
Sbjct  391  QGCLGVSEAEFAAWLMQEPPLLMWITTLNRIKSAEQIVHNSKCSSCKTTPIRGPRYSCLK  570

Query  871  HFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFR  921
               Y+ CQ+CF  G+++  HK+ +P+ EYC  T+S E  +   ++++NK R
Sbjct  571  CTGYNQCQTCFLYGKISGKHKLKHPVREYCIKTSSKEITKLLLELIRNKLR  723


>emb|AL806516.4| Mouse DNA sequence from clone RP23-453N20 on chromosome X Contains 
part of the Dmd gene for dystrophin muscular dystrophy 
and a CpG island, complete sequence
Length=179534

 Score =  130 bits (326),  Expect = 7e-27, Method: Compositional matrix adjust.
 Identities = 63/71 (88%), Positives = 67/71 (94%), Gaps = 0/71 (0%)
 Frame = +1

Query  94      IERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTV  153
               +ERIQ QWDEVQE LQNRRQQLNEMLKDSTQWLEAKEEAEQV+GQ R KL+SWKEGP+TV
Sbjct  106690  VERIQIQWDEVQEQLQNRRQQLNEMLKDSTQWLEAKEEAEQVIGQVRGKLDSWKEGPHTV  106869

Query  154     DAIQKKITETK  164
               DAIQKKITETK
Sbjct  106870  DAIQKKITETK  106902


 Score =  116 bits (291),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 63/64 (98%), Gaps = 0/64 (0%)
 Frame = +2

Query  216     RVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELM  275
               RVSE+EAALEETHRLLQQFPLDLEKFL+W+TEAETTANVLQDA+RKE+LLEDS+GV+ELM
Sbjct  178166  RVSEQEAALEETHRLLQQFPLDLEKFLSWITEAETTANVLQDASRKEKLLEDSRGVRELM  178345

Query  276     KQWQ  279
               K WQ
Sbjct  178346  KPWQ  178357


 Score =  112 bits (279),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 52/55 (94%), Positives = 54/55 (98%), Gaps = 0/55 (0%)
 Frame = +2

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKA  55
             MPSSL+LEVPALADFNRAWTELTDWLSLLD+VIKSQRVMVGDLEDINEMIIKQK 
Sbjct  5336  MPSSLLLEVPALADFNRAWTELTDWLSLLDRVIKSQRVMVGDLEDINEMIIKQKV  5500


 Score = 94.4 bits (233),  Expect = 4e-16, Method: Compositional matrix adjust.
 Identities = 47/56 (83%), Positives = 49/56 (87%), Gaps = 0/56 (0%)
 Frame = +3

Query  161     TETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKR  216
               T   QLAKDLRQ Q +VDVANDLALKLLRDYSADDTRKVHMITENIN SW +IHKR
Sbjct  130215  THV*QLAKDLRQRQISVDVANDLALKLLRDYSADDTRKVHMITENINTSWGNIHKR  130382


 Score = 77.8 bits (190),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 38/40 (95%), Positives = 40/40 (100%), Gaps = 0/40 (0%)
 Frame = +2

Query  54     KATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR  93
              +AT+QDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR
Sbjct  63002  QATLQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR  63121


>emb|AJ544612.1| Takifugu rubripes dmd gene for putative dystrophin, exons 57-65
Length=14136

 Score = 78.2 bits (191),  Expect(2) = 9e-27, Method: Compositional matrix adjust.
 Identities = 34/59 (57%), Positives = 51/59 (86%), Gaps = 0/59 (0%)
 Frame = +3

Query  279   QDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIR  337
             QDLQ EI++HT++YH+LDEN Q+I+ SL  ++DA LL+RRLDNM+ +W++LR K+L++R
Sbjct  3903  QDLQAEIDSHTELYHSLDENGQRIVTSLGDTEDAALLRRRLDNMSQRWNDLRTKTLSMR  4079


 Score = 72.0 bits (175),  Expect(2) = 9e-27, Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 43/60 (71%), Gaps = 0/60 (0%)
 Frame = +2

Query  331   KKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRA  390
             K  L  R+HLE+    WKRLH+SLQELL WL+L++ +L ++ P+GGD PAVQ Q D HR 
Sbjct  4142  KPRLFSRAHLESEMAPWKRLHMSLQELLNWLRLRNQQLEKEPPVGGDVPAVQAQLDTHRV  4321


 Score =  103 bits (258),  Expect = 4e-19, Method: Compositional matrix adjust.
 Identities = 49/91 (53%), Positives = 74/91 (81%), Gaps = 0/91 (0%)
 Frame = +3

Query  430   ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLK  489
             ++ PEERAQNV R++RK+A++V  +W++LN  S +WQ+K++  L+RL ELQEA D LD +
Sbjct  8382  DISPEERAQNVGRVIRKEADDVIMKWDRLNTDSVEWQKKLELALDRLMELQEAEDLLDGQ  8561

Query  490   LRQAEVIKGSWQPVGDLLIDSLQDHLEKVKA  520
             LRQAE++K +W+PVGDLLI+SL ++++K K 
Sbjct  8562  LRQAEMVKEAWEPVGDLLIESLPENIDKAKV  8654


 Score = 76.6 bits (187),  Expect = 7e-11, Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 76/166 (45%), Gaps = 37/166 (22%)
 Frame = +2

Query  88   TIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWK  147
            T     ++R+Q  W++    L +R +QL+ M +DS  WL+AK+  +  + +A  +LESW 
Sbjct  26   TFFVPVVDRLQAHWEDSHTKLLDRMKQLHNMQQDSIDWLDAKKRVDVHISRASDRLESWL  205

Query  148  EGPYTVDAIQKKITETK-------------------------------------QLAKDL  170
            E  YTVD ++K+  E K                                        K+L
Sbjct  206  EITYTVDELKKQNAELKVGLELLTLRMHQVSAGLNW*ERQLLHIYH*PGFPPLQVFMKEL  385

Query  171  RQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKR  216
            +QWQ  VD  N LA  LL  Y+ DDT KV  +  N+ A+W  I KR
Sbjct  386  QQWQGQVDETNALADNLLTLYANDDTHKVTQVNNNMMATWTHISKR  523


 Score = 76.3 bits (186),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 44/78 (56%), Positives = 52/78 (66%), Gaps = 4/78 (5%)
 Frame = +1

Query  202   ITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK  261
             +T  I+A     H  VS+R+ ALE   +LLQQF LDL+KFL WLTEAETT NVL DAT K
Sbjct  826   VTSVISAK---CHSSVSDRKTALEAALKLLQQFYLDLDKFLNWLTEAETTCNVLIDATNK  996

Query  262   ERLLEDSKGVKELMKQWQ  279
             ERL E     K L+ QW+
Sbjct  997   ERLPEQP-AAKNLLAQWK  1047


 Score = 59.3 bits (142),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 0/52 (0%)
 Frame = +3

Query  518   VKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQV  569
             ++  + EIAP+K++V+H+N LA       IQLSP NL  ++DLNTRW+LLQV
Sbjct  9237  MQEFQEEIAPIKDDVTHMNQLASTFGPHDIQLSPANLERIDDLNTRWRLLQV  9392


>gb|AF213440.1|AF213440 Homo sapiens dystrophin (DMD) gene, exon 55 and partial cds
Length=618

 Score =  129 bits (323),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 67/74 (90%), Positives = 68/74 (91%), Gaps = 0/74 (0%)
 Frame = +1

Query  206  INASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  265
            I AS   +  RVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL
Sbjct  70   IIASEHLVLCRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  249

Query  266  EDSKGVKELMKQWQ  279
            EDSKGVKELMKQWQ
Sbjct  250  EDSKGVKELMKQWQ  291


>gb|AC079175.24| Homo sapiens Xp BAC RP11-122N14 (Roswell Park Cancer Institute 
Human BAC Library) complete sequence
Length=163198

 Score =  129 bits (323),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 67/74 (90%), Positives = 68/74 (91%), Gaps = 0/74 (0%)
 Frame = +1

Query  206    INASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  265
              I AS   +  RVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL
Sbjct  34336  IIASEHLVLCRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  34515

Query  266    EDSKGVKELMKQWQ  279
              EDSKGVKELMKQWQ
Sbjct  34516  EDSKGVKELMKQWQ  34557


 Score =  120 bits (300),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 58/58 (100%), Positives = 58/58 (100%), Gaps = 0/58 (0%)
 Frame = +1

Query  280     DLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIR  337
               DLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIR
Sbjct  154777  DLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIR  154950


 Score =  109 bits (272),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 52/52 (100%), Positives = 52/52 (100%), Gaps = 0/52 (0%)
 Frame = +3

Query  165   QLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKR  216
             QLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKR
Sbjct  4086  QLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKR  4241


>gb|AY525165.1| Gallus gallus clone Dp71shoB putative short dystrophin mRNA, 
partial cds
Length=173

 Score =  128 bits (322),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 57/57 (100%), Positives = 57/57 (100%), Gaps = 0/57 (0%)
 Frame = +3

Query  597  VQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLR  653
            VQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLR
Sbjct  3    VQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLR  173


>ref|XM_001892815.1| Brugia malayi Zinc finger, ZZ type family protein partial mRNA
Length=1644

 Score =  128 bits (321),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 127/504 (25%), Positives = 210/504 (41%), Gaps = 91/504 (18%)
 Frame = +1

Query  725   VYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQI  784
             +Y    TGR+ V + K  + +LC   L DK RY F QV++S+G  +  +    L   + +
Sbjct  16    LYFRQHTGRLTVFAIKIALATLCAGKLMDKLRYAFSQVSNSSGTMEWDKFSGYLQQVLAL  195

Query  785   PRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVA  842
                + E  +FG +  E ++  CFQ       +    FLD M  +P    ++WLP+LHR+A
Sbjct  196   ATAVFEGPTFGYT--ETALGQCFQ---KDQRVNLNAFLDVMLADPCPPCLMWLPLLHRMA  360

Query  843   AAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTP  902
             + E   H   C+ C+     GFRY+  +  NY +C+ CF+ GR +  H   + M EY   
Sbjct  361   SVEHVYHPVVCDACQVRSFTGFRYKCQRCTNYQLCEQCFWRGRTSSAHSNEHEMKEY---  531

Query  903   TTSGEDVRDFAKVLKNKFRTKRY--FAKHPRMGYLPVQTVLEGDNMETPASSPQLSHDDT  960
             ++     +  A  +    R       + HP     P + +   D       +P  S    
Sbjct  532   SSYKSPTKQLAHSIHKSLRCVPVPNRSTHPIFPERPERPL---DLANILPITPTTSRRRL  702

Query  961   HSRIEHYASRL--AEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDS--PLSQPR  1016
                ++ + S++   +   +NGS          ++DDEH LI  Y   L+  +  P   P+
Sbjct  703   SEGLKDWTSQILPGQFPVTNGS----------NMDDEHKLIARYSAKLSGRTQYPFVLPK  852

Query  1017  SPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTS  1076
               A  +     +E    + ++A LEEEN  +  E + LKQQ E +               
Sbjct  853   DRATSM-----DENLNEKTLIARLEEENGEMIREMEMLKQQQELENT-------------  978

Query  1077  PQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGT  1136
                  D +L      LR+ K +LE +M+I++   +QL  QL  L   L Q +      G+
Sbjct  979   -----DEQLNG----LRERKAQLEEKMRIMQQTRRQLMQQLEVLMSELNQSKG-----GS  1116

Query  1137  TVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPS  1196
               + P +            L  +GS+                 ST   +   Q  +S P+
Sbjct  1117  MGAIPES------------LTGIGSR----------------VSTAFRDRAVQRASSVPA  1212

Query  1197  SRGHNVGSLFHMADDLGRAMESLV  1220
             ++    G L H ADD+   M +L+
Sbjct  1213  AQLQ--GDLLHAADDITNNMSTLL  1278


>gb|EF473649.1| Danio rerio utrophin-like mRNA, partial sequence
Length=10542

 Score =  127 bits (318),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 102/234 (43%), Positives = 137/234 (58%), Gaps = 52/234 (22%)
 Frame = +2

Query  993    DDEHLLIQHYCQSLN-QDSPLSQPRSPA---------------------QILISLESEER  1030
              D+EH LI  YCQ+L  + S  SQP+SPA                     QIL ++E EER
Sbjct  9620   DEEHALILQYCQTLGGEGSSFSQPQSPAHINRTPTHNTHSPSYLLQSPAQILQAVEREER  9799

Query  1031   GELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAK  1090
              GELERI+A LE++ R LQ EY+ L+ Q+                 +  +P +A+L+AEAK
Sbjct  9800   GELERIIARLEDDQRVLQREYEELRFQYGQP----------GAAAASGAPDEADLLAEAK  9949

Query  1091   LLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDS  1150
              LLRQHKGRLEARMQILEDHNKQLESQL+RLRQLL QP+    +NGT+ SS   SL +  +
Sbjct  9950   LLRQHKGRLEARMQILEDHNKQLESQLYRLRQLLHQPE----LNGTSSSS---SLHQDAA  10108

Query  1151   SQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGS  1204
               QP +              ++ L    ++++ L EVM+Q+N+SFP+    +V S
Sbjct  10109  GQPEI-------------SDEFLHQCANSNSALAEVMDQINHSFPACSPSSVSS  10231


>dbj|AB171279.1| Macaca fascicularis brain cDNA clone: QorA-13928, similar to 
human dystrobrevin, alpha (DTNA), transcript variant 2, mRNA, 
RefSeq: NM_032975.2
Length=1832

 Score =  113 bits (283),  Expect(2) = 7e-26, Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 95/183 (51%), Gaps = 7/183 (3%)
 Frame = +3

Query  719   LNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLL  778
             L   L  +D    G+I V + K  + +LC   + DK RY+F  ++ S+G     R    L
Sbjct  579   LTSCLQRFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFL  758

Query  779   HDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEP--QSMVWLP  836
              + +++P  + E  SFG +  E S RSCF   + + ++    FLD +  +P  Q +VWLP
Sbjct  759   REVLKLPTAVFEGPSFGYT--EQSARSCF---SQQKKVTLNGFLDTLMSDPPPQCLVWLP  923

Query  837   VLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPM  896
             +LHR+A  E   H  +C+ C    ++GFRYR  +  NY +CQ CF+ G     H   + M
Sbjct  924   LLHRLANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQM  1103

Query  897   VEY  899
              EY
Sbjct  1104  KEY  1112


 Score = 34.3 bits (77),  Expect(2) = 7e-26, Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
 Frame = +1

Query  637  DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQ--PMDILQIINCL  694
            DL+ +R S YRTA KLR +QK   L L+ +    +AL ++ L   D    +++ ++   L
Sbjct  319  DLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNIELNVSRLEAVL  498

Query  695  TTIYDRLEQ  703
            +TI+ +L +
Sbjct  499  STIFYQLNK  525


>dbj|AK094494.1| Homo sapiens cDNA FLJ37175 fis, clone BRACE2028410, highly similar 
to Homo sapiens beta-dystrobrevin (BDTN) mRNA
Length=2200

 Score = 79.3 bits (194),  Expect(2) = 4e-25, Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 98/193 (50%), Gaps = 13/193 (6%)
 Frame = +1

Query  637  DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
            + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  202  NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRNNGLNTLDHTTEISVSRLETVI  381

Query  695  TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
            ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  382  SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  555

Query  751  LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
            + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  556  MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  723

Query  811  NNKPEIEAALFLD  823
              + +I   +FLD
Sbjct  724  -QQRKIMLNMFLD  759


 Score = 65.9 bits (159),  Expect(2) = 4e-25, Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 0/71 (0%)
 Frame = +2

Query  829  PQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAK  888
            PQ +VWLP++HR+A  E   H  +C+ C+   ++GFRYR  +  NY +CQ+CF+ G    
Sbjct  779  PQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRCQQCHNYQLCQNCFWRGHAGG  958

Query  889  GHKMHYPMVEY  899
             H   + M E+
Sbjct  959  PHSNQHQMKEH  991


>emb|AJ544620.1| Takifugu rubripes utrn gene for putative utrophin, exons 55-78
Length=56648

 Score = 95.5 bits (236),  Expect(2) = 9e-25, Method: Compositional matrix adjust.
 Identities = 50/84 (59%), Positives = 56/84 (66%), Gaps = 6/84 (7%)
 Frame = +3

Query  652    LRRLQKALCL------DLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEH  705
              L  L   LCL      DLL L+ A +   QH L  N Q + +  IINCLT+IYD LEQEH
Sbjct  34815  LTPLSSVLCLLPSPAVDLLDLNVAQNTFKQHKLANNSQLLSVPDIINCLTSIYDGLEQEH  34994

Query  706    NNLVNVPLCVDMCLNWLLNVYDTG  729
               +LVNVPLCVDMCLNWLLNVYDT 
Sbjct  34995  KDLVNVPLCVDMCLNWLLNVYDTC  35066


 Score = 48.1 bits (113),  Expect(2) = 9e-25, Method: Compositional matrix adjust.
 Identities = 19/28 (67%), Positives = 25/28 (89%), Gaps = 0/28 (0%)
 Frame = +2

Query  729    GRTGRIRVLSFKTGIISLCKAHLEDKYR  756
              GR+G+IRVLS K G++SLCK HLE+KY+
Sbjct  35183  GRSGKIRVLSMKIGLLSLCKGHLEEKYK  35266


 Score =  108 bits (270),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 49/59 (83%), Positives = 53/59 (89%), Gaps = 0/59 (0%)
 Frame = +1

Query  811    NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL  869
              NNK E+E   F+DWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI+GFR  +L
Sbjct  38485  NNKVELEPRQFVDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIVGFR*SAL  38661


 Score =  108 bits (269),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 50/89 (56%), Positives = 66/89 (74%), Gaps = 0/89 (0%)
 Frame = +1

Query  430    ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLK  489
              +L PEE+A+ + R +RKQ  EV   WE+L  H   WQ ++D+ LERLQELQ + D+LDL+
Sbjct  25009  DLTPEEKARGLARAIRKQTGEVRERWERLKGHIGGWQSQVDQALERLQELQSSMDQLDLR  25188

Query  490    LRQAEVIKGSWQPVGDLLIDSLQDHLEKV  518
              L QAE  K +WQPVGDLLID+LQDH++K 
Sbjct  25189  LTQAEEAKAAWQPVGDLLIDALQDHIDKT  25275


 Score = 96.7 bits (239),  Expect = 8e-17, Method: Compositional matrix adjust.
 Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 8/85 (9%)
 Frame = +1

Query  1045   RNLQAEYDRLKQQHEHKGLSPLPSPPEMM---PTSPQSPRDAELIAEAKLLRQHKGRLEA  1101
              RNLQ EY++L++QH  +G     +PPE      TS   P +A+L+AEAKLLRQHKGRLEA
Sbjct  51496  RNLQREYEQLQEQHGQRG-----APPEGQWESETSFSHPDEADLLAEAKLLRQHKGRLEA  51660

Query  1102   RMQILEDHNKQLESQLHRLRQLLEQ  1126
              RM ILE+HNKQLESQLHRLRQLL Q
Sbjct  51661  RMHILEEHNKQLESQLHRLRQLLHQ  51735


 Score = 94.4 bits (233),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 42/53 (79%), Positives = 48/53 (90%), Gaps = 0/53 (0%)
 Frame = +2

Query  903    TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQL  955
              TTSGED+RDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDNMET  ++  L
Sbjct  41618  TTSGEDMRDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNMET*VTTEGL  41776


 Score = 92.0 bits (227),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 42/51 (82%), Positives = 47/51 (92%), Gaps = 0/51 (0%)
 Frame = +1

Query  758    LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQ  808
              LF QVAS+   CDQR+LGLLLH++IQIPRQLGEVA+FGGSNIEPSVRSCFQ
Sbjct  36361  LFSQVASAGDTCDQRQLGLLLHEAIQIPRQLGEVAAFGGSNIEPSVRSCFQ  36513


 Score = 88.2 bits (217),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 36/52 (69%), Positives = 44/52 (84%), Gaps = 2/52 (3%)
 Frame = +2

Query  860    PIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRD  911
              P++  RYRSLKHFNYD+CQSCFFSGR AKGHK++YPMVEYCTP ++   + D
Sbjct  40253  PVV--RYRSLKHFNYDVCQSCFFSGRTAKGHKLNYPMVEYCTPVSAPGCLHD  40402


 Score = 70.5 bits (171),  Expect = 6e-09, Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 49/68 (72%), Gaps = 0/68 (0%)
 Frame = +3

Query  271    VKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELR  330
              +  L   ++D+Q EI+AH D+Y ++D N  K++++L  S++A  LQ RLD+MN +W++L+
Sbjct  18084  ISSLSAVFKDIQAEIDAHNDIYKSVDGNKSKMVKALGSSEEAAFLQHRLDDMNQRWNDLK  18263

Query  331    KKSLNIRS  338
               KS NIRS
Sbjct  18264  AKSANIRS  18287


 Score = 56.2 bits (134),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 25/31 (80%), Positives = 28/31 (90%), Gaps = 0/31 (0%)
 Frame = +3

Query  630    ELYQSLADLNNVRFSAYRTAMKLRRLQKALC  660
               L+  +ADLNNVRFSAYRTAMK+RRLQKALC
Sbjct  32766  SLFLPVADLNNVRFSAYRTAMKIRRLQKALC  32858


 Score = 55.8 bits (133),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
 Frame = +3

Query  337    RSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPA-VQKQN  385
              R+HLEAS+++W RL   L+EL  W+ +KD++L++Q P+GGD P  +Q+QN
Sbjct  19101  RAHLEASAERWSRLLGLLEELWRWICMKDEDLAKQMPVGGDVPTLLQQQN  19250


 Score = 55.5 bits (132),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 0/52 (0%)
 Frame = +1

Query  519    KALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVA  570
              +A R EIAPL+++V  VN+L+ +LT L IQLS      L+ LN RWKLLQVA
Sbjct  26074  QAFREEIAPLRQDVRVVNELSAELTPLDIQLSSTAARQLDQLNMRWKLLQVA  26229


 Score = 51.6 bits (122),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 37/54 (68%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
 Frame = +3

Query  993    DDEHLLIQHYCQSLN-QDSPLSQPRSPAQILISLESEERGELERILADLEEENR  1045
              DDEH LI  YCQ+L  + SP SQP+SPAQIL ++E EERGELERI+A LEEE R
Sbjct  51207  DDEHTLILQYCQTLGGESSPCSQPQSPAQILQAVEREERGELERIIARLEEEQR  51368


 Score = 51.6 bits (122),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 22/29 (75%), Positives = 27/29 (93%), Gaps = 0/29 (0%)
 Frame = +3

Query  567    LQVAVEDRVRQLHEAHRDFGPASQHFLST  595
              +QVAVEDR++ L EAHRDFGP+SQHFLS+
Sbjct  27339  VQVAVEDRLKLLQEAHRDFGPSSQHFLSS  27425


 Score = 47.8 bits (112),  Expect = 0.037, Method: Compositional matrix adjust.
 Identities = 18/21 (85%), Positives = 20/21 (95%), Gaps = 0/21 (0%)
 Frame = +2

Query  616    HETQTTCWDHPKMTELYQSLA  636
              H+TQTTCWDHPKMTELYQ+L 
Sbjct  32030  HQTQTTCWDHPKMTELYQTLG  32092


 Score = 40.0 bits (92),  Expect = 7.4, Method: Compositional matrix adjust.
 Identities = 18/19 (94%), Positives = 18/19 (94%), Gaps = 0/19 (0%)
 Frame = +1

Query  952    SPQLSHDDTHSRIEHYASR  970
              SPQLSHDDTHSRIE YASR
Sbjct  44701  SPQLSHDDTHSRIEQYASR  44757


>gb|AC152831.2| Ornithorhynchus anatinus chromosome UNK clone OABb-168A1, complete 
sequence
Length=139370

 Score = 73.6 bits (179),  Expect(2) = 2e-24, Method: Compositional matrix adjust.
 Identities = 32/49 (65%), Positives = 39/49 (79%), Gaps = 0/49 (0%)
 Frame = +1

Query  900    CTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET  948
              C  TTS E++RDFA  LKNKFR+K YF++HP+ GYLPVQ+VLE D  ET
Sbjct  69037  CPQTTSSENMRDFATTLKNKFRSKHYFSRHPQRGYLPVQSVLEADFSET  69183


 Score = 68.9 bits (167),  Expect(2) = 2e-24, Method: Compositional matrix adjust.
 Identities = 29/47 (61%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
 Frame = +2

Query  860    PIIGF-RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTS  905
              P+  F RYRSLK FN DICQ CF +GR +KG+K+HYP++EY TP  S
Sbjct  68780  PVPPFPRYRSLKQFNVDICQMCFLTGRASKGNKLHYPIMEYYTPVRS  68920


 Score = 94.4 bits (233),  Expect = 4e-16, Method: Compositional matrix adjust.
 Identities = 39/57 (68%), Positives = 49/57 (85%), Gaps = 0/57 (0%)
 Frame = +1

Query  758    LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKP  814
              LF QVA   G CDQR LG+LLH++IQ+PRQLGEVA+FGGSN+EPS+RSCF+F + +P
Sbjct  66739  LFSQVAHPGGLCDQRHLGILLHEAIQVPRQLGEVAAFGGSNVEPSIRSCFRFVSAEP  66909


 Score = 89.0 bits (219),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 37/57 (64%), Positives = 43/57 (75%), Gaps = 0/57 (0%)
 Frame = +3

Query  810    ANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRY  866
              +  KP +E A FL+W  LEPQSMVWL VLHRVA AE  KHQ KC++C+ CPI GFRY
Sbjct  67434  STGKPVVEVAQFLEWANLEPQSMVWLAVLHRVALAEPVKHQTKCSVCRHCPIKGFRY  67604


 Score = 87.4 bits (215),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 37/67 (55%), Positives = 52/67 (77%), Gaps = 0/67 (0%)
 Frame = +3

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              +DL+ LS A +  ++H L+  +  MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LN
Sbjct  64962  VDLVPLSTALEIFNEHELQPGEHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMTLN  65141

Query  721    WLLNVYD  727
              WLLNVYD
Sbjct  65142  WLLNVYD  65162


 Score = 84.0 bits (206),  Expect = 5e-13, Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 0/93 (0%)
 Frame = +3

Query  430    ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLK  489
              ++ P  R QN +RL+ KQA   +  WEKL     D  R I+ TLE+L +++ A +ELD  
Sbjct  60486  DVSPRLRGQNGSRLVWKQATVASELWEKLTARCVDQHRHIERTLEQLLDVRRAMEELDAS  60665

Query  490    LRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALR  522
              L QAE ++ +W+P+GDL IDSL DH++  K  R
Sbjct  60666  LGQAEGVRATWEPIGDLFIDSLPDHIQTTKVGR  60764


 Score = 74.3 bits (181),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 42/71 (59%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
 Frame = +2

Query  1045   RNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQ  1104
              R LQ E  RLK QHE  G +P  +     P + Q P + EL+AEA++LRQHK RLE RMQ
Sbjct  71141  RILQGELRRLKWQHEEAGEAPPLA--AGTPEAAQDPHNEELLAEARILRQHKSRLETRMQ  71314

Query  1105   ILEDHNKQLES  1115
              ILEDHNKQLES
Sbjct  71315  ILEDHNKQLES  71347


 Score = 52.0 bits (123),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
 Frame = +2

Query  588    ASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYR  647
              A Q     SV GP          P   +H+ QTTCWDHPKMTELYQ+L +      + +R
Sbjct  63146  AGQKGHCLSVTGP---------APCVSSHQAQTTCWDHPKMTELYQTLGEKGTTGRAGWR  63298

Query  648    TA  649
               A
Sbjct  63299  RA  63304


 Score = 49.3 bits (116),  Expect = 0.015, Method: Compositional matrix adjust.
 Identities = 22/34 (64%), Positives = 27/34 (79%), Gaps = 0/34 (0%)
 Frame = +2

Query  626    PKMTELYQSLADLNNVRFSAYRTAMKLRRLQKAL  659
              P    L +  A+LNN++FSAYRTAMKLRR+QKAL
Sbjct  63518  PNRVSLCRFPAELNNIKFSAYRTAMKLRRVQKAL  63619


 Score = 48.5 bits (114),  Expect = 0.025, Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 0/57 (0%)
 Frame = +3

Query  337    RSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKR  393
              R+ LEA SDQ  +L   LQE++ WL  KD+ELS Q P+ GD   VQ++ + H    R
Sbjct  59226  RARLEAFSDQSGKLQAPLQEIVDWLGHKDEELSAQLPLRGDVALVQQEKETHAVSSR  59396


 Score = 45.1 bits (105),  Expect = 0.25, Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 25/29 (86%), Gaps = 0/29 (0%)
 Frame = +3

Query  568    QVAVEDRVRQLHEAHRDFGPASQHFLSTS  596
              Q +V +R++QL +AHRDFGP SQHFL+++
Sbjct  61587  QTSVSERLKQLQDAHRDFGPGSQHFLASA  61673


 Score = 44.7 bits (104),  Expect = 0.33, Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 0/47 (0%)
 Frame = +2

Query  524    EIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVA  570
              E++P+K+ V  VND A QL    + LS  N   LE +NTRWK LQV 
Sbjct  61142  ELSPMKDGVKLVNDRAHQLAISDVHLSMENSRALEQINTRWKQLQVG  61282


 Score = 43.5 bits (101),  Expect = 0.79, Method: Compositional matrix adjust.
 Identities = 18/22 (81%), Positives = 19/22 (86%), Gaps = 0/22 (0%)
 Frame = +2

Query  594    STSVQGPWERAISPNKVPYYIN  615
              + SVQ PWERAISPNKVPYYI 
Sbjct  62207  TASVQVPWERAISPNKVPYYIK  62272


 Score = 42.7 bits (99),  Expect = 1.4, Method: Compositional matrix adjust.
 Identities = 22/38 (57%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
 Frame = +3

Query  933    GYLPVQTVLEGDNMETPASSPQLSHDDTHSRIEHYASR  970
              G+L  +T+  G +   PASSP L H DTHSRIEH+ASR
Sbjct  69837  GWL-ARTLGRGCSFR-PASSPVLPHADTHSRIEHFASR  69944


>gb|DQ788696.1| Danio rerio utrophin isoform G mRNA, partial cds, alternatively 
spliced
Length=462

 Score =  121 bits (303),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 54/103 (52%), Positives = 82/103 (79%), Gaps = 0/103 (0%)
 Frame = +1

Query  279  QDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRS  338
            +D+Q EIEAH DV+ +++ N  K++++L GS++AV LQ+RLD+MN +WS+L+ KS NIR+
Sbjct  151  KDIQAEIEAHNDVFRSVEGNKLKMVKALGGSEEAVFLQQRLDDMNQRWSDLKAKSANIRA  330

Query  339  HLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAV  381
            HLEAS+++W RL   L++L  W+ LKD+EL++Q PIGGD P +
Sbjct  331  HLEASAERWNRLLSVLEDLSRWIGLKDEELNKQMPIGGDVPTL  459


>dbj|AK240524.1| Sus scrofa mRNA, clone:UTR010089D01, expressed in uterus
Length=1782

 Score =  120 bits (301),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 168/381 (44%), Gaps = 54/381 (14%)
 Frame = +1

Query  743   IISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPS  802
             + ++C   + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E S
Sbjct  7     LATMCGGKMLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHS  180

Query  803   VRSCFQFANNKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECP  860
             VR+CF     + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   
Sbjct  181   VRTCFP---QQKKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCGS  351

Query  861   IIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEY-------------------CT  901
             ++GFRYR  +  NY +CQ+CF+ G  +  H   + M E+                   C 
Sbjct  352   MMGFRYRCQQCHNYQLCQNCFWRGHASGPHSNQHQMKEHSSWKSPAKKLSHAISKSLGCV  531

Query  902   PTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHD---  958
             PT        F +  +            P                 TP    Q S     
Sbjct  532   PTREPPHP-VFPEQPEKPLDLANIVPPRPLANMNDTMVSHMSSGAPTPTKRLQYSQHIPS  708

Query  959   ---DTHSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQP  1015
                D H+ I  Y +RL      + + + DS S    +D+EH LI  Y   L  ++  +  
Sbjct  709   HLADEHALIASYVARL-----QHCARVLDSPS---RLDEEHRLIARYAARLAAEA-GNVT  861

Query  1016  RSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPT  1075
             R P  +  + ++ +  +  +++A+LE +NR +  E  RL+ +HE              PT
Sbjct  862   RPPTDLSFNFDANK--QQRQLIAELENKNREILQEIQRLRLEHEQAS----------QPT  1005

Query  1076  SPQSPRDAELIAEAKLLRQHK  1096
               ++ ++  L+AE +LLRQ K
Sbjct  1006  PEKAQQNPTLLAELRLLRQRK  1068


>gb|L05647.1|HUMDYSTR13 Homo sapiens dystrophin (DMD) gene, exon 56
Length=360

 Score =  120 bits (300),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 58/58 (100%), Positives = 58/58 (100%), Gaps = 0/58 (0%)
 Frame = +1

Query  280  DLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIR  337
            DLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIR
Sbjct  70   DLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIR  243


>dbj|AK294357.1| Homo sapiens cDNA FLJ57272 complete cds, highly similar to Dystrobrevin 
beta
Length=1495

 Score =  107 bits (266),  Expect(2) = 7e-24, Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 167/375 (44%), Gaps = 72/375 (19%)
 Frame = +2

Query  758   LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIE  817
             +F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF     + +I 
Sbjct  395   VFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP---QQRKIM  559

Query  818   AALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYD  875
               +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR  +  NY 
Sbjct  560   LNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRCQQCHNYQ  739

Query  876   ICQSCFFSGRVAKGHKMHYPMVEY-------------------CTPTT---------SGE  907
             +CQ+CF+ G     H   + M E+                   C PT            E
Sbjct  740   LCQNCFWRGHAGGPHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPTREPPHPVFPEQPE  919

Query  908   DVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHD------DTH  961
                D A ++  +  T         M    V  +  G  + TP    Q S D      D H
Sbjct  920   KPLDLAHIVPPRPLTN--------MNDTMVSHMSSG--VPTPTKRLQYSQDIPSHLADEH  1069

Query  962   SRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQI  1021
             + I  Y +RL      + + + DS S    +D+EH LI  Y   L  ++  +  R P  +
Sbjct  1070  ALIASYVARL-----QHCARVLDSPS---RLDEEHRLIARYAARLAAEA-GNVTRPPTDL  1222

Query  1022  LISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPR  1081
               + ++ +  +  +++A+LE +NR +  E  RL+ +HE              PT  ++ +
Sbjct  1223  SFNFDANK--QQRQLIAELENKNREILQEIQRLRLEHEQAS----------*PTPEKAQQ  1366

Query  1082  DAELIAEAKLLRQHK  1096
             +  L+AE +LLRQ K
Sbjct  1367  NPTLLAELRLLRQRK  1411


 Score = 33.9 bits (76),  Expect(2) = 7e-24, Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
 Frame = +1

Query  637  DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDI--LQIINCL  694
            + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  106  NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  285

Query  695  TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYD  727
            ++IY     RL   H   ++V   + + LN+++  YD
Sbjct  286  SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYD  390


>gb|DQ431251.1| Schistosoma mansoni dystrobrevin mRNA, complete cds
Length=2687

 Score =  118 bits (295),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 136/308 (44%), Gaps = 28/308 (9%)
 Frame = +3

Query  638   LNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQP---MDILQIINCL  694
              +++RF+AYRTA KLR +Q+    +++ L    +   +  L Q + P   +D       L
Sbjct  300   FDSIRFAAYRTASKLRFIQQRTLFNIMDLWRVVETFREFGLHQLNDPQASLDYGSTFRLL  479

Query  695   TTIYDRLEQEHN------------NLVNVP---LCVDMCLNWLLNVYDTGRTGRIRVLSF  739
             + IY  +   +             N +N P   +  ++ L WL    D   TGR+ V   
Sbjct  480   SRIYSHIPTTNMNVTTTTDETTSTNAINRPAVIIAAEILLGWLGYALDLCATGRLSVTGL  659

Query  740   KTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNI  799
             K  + +L  A   DK+RY F  ++  +G     +    L D +++P     ++ F G+N 
Sbjct  660   KITLSTLTNARPADKFRYHFTLLSDPSGALIFSKFEAYLQDLLKLP-----ISVFEGTNF  824

Query  800   EPSVRSC-FQFANNKPEIEAALFLDWMRLE--PQSMVWLPVLHRVAAAETAKHQAKCNIC  856
               + ++    F      +    FLD M  +  PQ +VWL + HR+ +    +H  +C  C
Sbjct  825   YYTPQASQTMFTGRSKNVVLEEFLDRMLSDQGPQVLVWLTIFHRLISVANVRHNVRCEGC  1004

Query  857   KECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVL  916
             K  PI G RY+  +  +Y++CQ CF+ G     H   + + EY     S    R F   L
Sbjct  1005  KREPICGLRYKCTRCPHYNLCQDCFWIGVTTDQHTNAHDVKEYS--AASKSHSRQFGHSL  1178

Query  917   KNKFRTKR  924
             +  F+  R
Sbjct  1179  RKSFQFGR  1202


>gb|M86891.1|HUMDYST08 H.sapiens dystrophin gene, exon 67
Length=433

 Score =  117 bits (292),  Expect = 5e-23, Method: Composition-based stats.
 Identities = 53/57 (92%), Positives = 54/57 (94%), Gaps = 0/57 (0%)
 Frame = +3

Query  758  LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKP  814
            LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQF +  P
Sbjct  168  LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFVSYSP  338


>emb|AL844151.3| Mouse DNA sequence from clone RP23-73O7 on chromosome X Contains 
part of the Dmd gene for dystrophin muscular dystrophy, 
complete sequence
Length=134513

 Score =  116 bits (291),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 63/64 (98%), Gaps = 0/64 (0%)
 Frame = +2

Query  216  RVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELM  275
            RVSE+EAALEETHRLLQQFPLDLEKFL+W+TEAETTANVLQDA+RKE+LLEDS+GV+ELM
Sbjct  632  RVSEQEAALEETHRLLQQFPLDLEKFLSWITEAETTANVLQDASRKEKLLEDSRGVRELM  811

Query  276  KQWQ  279
            K WQ
Sbjct  812  KPWQ  823


 Score =  111 bits (277),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 53/60 (88%), Positives = 56/60 (93%), Gaps = 0/60 (0%)
 Frame = +3

Query  278     WQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIR  337
               W DLQGEIE HTD+YHNLDEN QKILRSLEGSD+A LLQRRLDNMNFKWSEL+KKSLNIR
Sbjct  127173  W*DLQGEIETHTDIYHNLDENGQKILRSLEGSDEAPLLQRRLDNMNFKWSELQKKSLNIR  127352


>emb|CR622461.1| full-length cDNA clone CS0DB006YJ19 of Neuroblastoma Cot 10-normalized 
of Homo sapiens (human)
Length=1775

 Score =  116 bits (290),  Expect = 8e-23, Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 185/411 (45%), Gaps = 62/411 (15%)
 Frame = +1

Query  820   LFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDIC  877
             +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR  +  NY +C
Sbjct  379   MFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRCQQCHNYQLC  558

Query  878   QSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPV  937
             Q+CF+ G     H   + M E+ +        +  AK L +             +G +P 
Sbjct  559   QNCFWRGHAGGPHSNQHQMKEHSS-------WKSPAKKLSHAISKS--------LGCVPT  693

Query  938   QTVLEGDNMETPASSPQLSHDDTHSRIEHYASRLAEMENSNGSYLNDSI-SPNESI----  992
             +        E P     L+H             L  M ++  S+++  + +P +S+    
Sbjct  694   REPPHPVFPEQPEKPLDLAHIVP-------PRPLTNMNDTMVSHMSSGVPTPTKSVLDSP  852

Query  993   ---DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQA  1049
                D+EH LI  Y   L  ++  +  R P  +  + ++ +  +  +++A+LE +NR +  
Sbjct  853   SRLDEEHRLIARYAARLAAEA-GNVTRPPTDLSFNFDANK--QQRQLIAELENKNREILQ  1023

Query  1050  EYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDH  1109
             E  RL+ +HE              PT  ++ ++  L+AE +LLRQ K  LE RM  L++ 
Sbjct  1024  EIQRLRLEHEQAS----------QPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES  1173

Query  1110  NKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGE  1169
              ++L  QL  L +LL     +A+  G+  +SP+    R     PM +R   + ++ +   
Sbjct  1174  RRELMVQLEELMKLL-----KAQATGSPHTSPTHGGGR---PMPMPVRSTSAGSTPTHCP  1329

Query  1170  EDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFHMADDLGRAMESLV  1220
             +D LS        ++E   Q       +R +    L   AD +   M SLV
Sbjct  1330  QDSLS---GVGGDVQEAFAQ------GTRRNLRNDLLVAADSITNTMSSLV  1455


>gb|AC156952.22| Mus musculus 10 BAC RP24-385D2 (Roswell Park Cancer Institute 
(C57BL/6J Male) Mouse BAC Library) complete sequence
Length=179140

 Score =  115 bits (287),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 60/82 (73%), Positives = 70/82 (85%), Gaps = 1/82 (1%)
 Frame = -2

Query  1045    RNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQ  1104
               RNLQ EY++LK+QH  +GL P+ SPP+ + +   +  D+ELIAEAKLLRQHKGRLEARMQ
Sbjct  131475  RNLQVEYEQLKEQHLRRGL-PVGSPPDSIVSPHHTSEDSELIAEAKLLRQHKGRLEARMQ  131299

Query  1105    ILEDHNKQLESQLHRLRQLLEQ  1126
               ILEDHNKQLESQLHRLRQLLEQ
Sbjct  131298  ILEDHNKQLESQLHRLRQLLEQ  131233


 Score =  111 bits (278),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 49/60 (81%), Positives = 53/60 (88%), Gaps = 0/60 (0%)
 Frame = -1

Query  811     NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
               NNKPEI    F+DWM LEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI+GFR  +L+
Sbjct  165169  NNKPEISVKEFIDWMHLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIVGFR*EALR  164990


 Score = 95.5 bits (236),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 43/54 (79%), Positives = 48/54 (88%), Gaps = 0/54 (0%)
 Frame = -1

Query  755     YRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQ  808
               +  LFK+VA  T  CDQR+LGLLLHD+IQIPRQLGEVA+FGGSNIEPSVRSCFQ
Sbjct  167479  FVGLFKEVAGPTEMCDQRQLGLLLHDAIQIPRQLGEVAAFGGSNIEPSVRSCFQ  167318


 Score = 94.4 bits (233),  Expect = 4e-16, Method: Compositional matrix adjust.
 Identities = 41/46 (89%), Positives = 45/46 (97%), Gaps = 0/46 (0%)
 Frame = -1

Query  903     TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET  948
               TTSGEDVRDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDN+ET
Sbjct  147112  TTSGEDVRDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNLET  146975


 Score = 87.8 bits (216),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 35/46 (76%), Positives = 39/46 (84%), Gaps = 0/46 (0%)
 Frame = -1

Query  859     CPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTT  904
               C  +  RYRSLKHFNYD+CQSCFFSGR AKGHK+HYPMVEYC P +
Sbjct  161791  CSFLHHRYRSLKHFNYDVCQSCFFSGRTAKGHKLHYPMVEYCIPVS  161654


 Score = 62.8 bits (151),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 39/53 (73%), Positives = 46/53 (86%), Gaps = 0/53 (0%)
 Frame = -3

Query  993     DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  1045
               +DEH LIQ YCQ+L  +SP+SQP+SPAQIL S+E EERGELERI+ADLEEE R
Sbjct  131972  EDEHALIQQYCQTLGGESPVSQPQSPAQILKSVEREERGELERIIADLEEEQR  131814


 Score = 44.7 bits (104),  Expect = 0.36, Method: Compositional matrix adjust.
 Identities = 19/29 (65%), Positives = 24/29 (82%), Gaps = 0/29 (0%)
 Frame = -2

Query  1168    GEEDLLSPPQDTSTGLEEVMEQLNNSFPS  1196
                 EDLL+PP DTST L +VMEQ+N++FPS
Sbjct  126783  ASEDLLAPPHDTSTDLTDVMEQINSTFPS  126697


 Score = 40.0 bits (92),  Expect = 7.7, Method: Compositional matrix adjust.
 Identities = 17/23 (73%), Positives = 20/23 (86%), Gaps = 0/23 (0%)
 Frame = -3

Query  948     TPASSPQLSHDDTHSRIEHYASR  970
               +P+ SPQL HDDTHSRIE YA+R
Sbjct  140627  SPSQSPQLFHDDTHSRIEQYATR  140559


>gb|AC153893.3| Mus musculus 10 BAC RP23-124O20 (Roswell Park Cancer Institute 
(C57BL/6J Female) Mouse BAC Library) complete sequence
Length=228194

 Score =  115 bits (287),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 60/82 (73%), Positives = 70/82 (85%), Gaps = 1/82 (1%)
 Frame = -2

Query  1045   RNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQ  1104
              RNLQ EY++LK+QH  +GL P+ SPP+ + +   +  D+ELIAEAKLLRQHKGRLEARMQ
Sbjct  14632  RNLQVEYEQLKEQHLRRGL-PVGSPPDSIVSPHHTSEDSELIAEAKLLRQHKGRLEARMQ  14456

Query  1105   ILEDHNKQLESQLHRLRQLLEQ  1126
              ILEDHNKQLESQLHRLRQLLEQ
Sbjct  14455  ILEDHNKQLESQLHRLRQLLEQ  14390


 Score =  111 bits (278),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 49/60 (81%), Positives = 53/60 (88%), Gaps = 0/60 (0%)
 Frame = -1

Query  811    NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
              NNKPEI    F+DWM LEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI+GFR  +L+
Sbjct  48326  NNKPEISVKEFIDWMHLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIVGFR*EALR  48147


 Score =  104 bits (260),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 45/89 (50%), Positives = 68/89 (76%), Gaps = 0/89 (0%)
 Frame = -2

Query  430    ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLK  489
              EL PEERAQ + + +RKQ+ EV  +WE LN  +++WQ+++ + LE+L++LQ A D+LD  
Sbjct  95191  ELTPEERAQKIAKAMRKQSSEVREKWENLNAVTSNWQKQVGKALEKLRDLQGAMDDLDAD  95012

Query  490    LRQAEVIKGSWQPVGDLLIDSLQDHLEKV  518
              +++ E ++  W+PVGDLLIDSLQDH+EK 
Sbjct  95011  MKEVEAVRNGWKPVGDLLIDSLQDHIEKT  94925


 Score = 95.5 bits (236),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 43/54 (79%), Positives = 48/54 (88%), Gaps = 0/54 (0%)
 Frame = -1

Query  755    YRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQ  808
              +  LFK+VA  T  CDQR+LGLLLHD+IQIPRQLGEVA+FGGSNIEPSVRSCFQ
Sbjct  50636  FVGLFKEVAGPTEMCDQRQLGLLLHDAIQIPRQLGEVAAFGGSNIEPSVRSCFQ  50475


 Score = 94.4 bits (233),  Expect = 4e-16, Method: Compositional matrix adjust.
 Identities = 41/46 (89%), Positives = 45/46 (97%), Gaps = 0/46 (0%)
 Frame = -1

Query  903    TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET  948
              TTSGEDVRDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDN+ET
Sbjct  30269  TTSGEDVRDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNLET  30132


 Score = 93.6 bits (231),  Expect = 6e-16, Method: Compositional matrix adjust.
 Identities = 51/90 (56%), Positives = 61/90 (67%), Gaps = 6/90 (6%)
 Frame = -3

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              +DLL L+   +   QH L QNDQ + +  +INCLTT YD LEQ H +LVNVPLCVDMCLN
Sbjct  64101  VDLLELNTTNEVFKQHKLNQNDQLLSVPDVINCLTTTYDGLEQLHKDLVNVPLCVDMCLN  63922

Query  721    WLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
              WLLNVYDT        LSFK  ++S  +AH
Sbjct  63921  WLLNVYDT*VCH----LSFK*SLVS--EAH  63850


 Score = 87.8 bits (216),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 35/46 (76%), Positives = 39/46 (84%), Gaps = 0/46 (0%)
 Frame = -1

Query  859    CPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTT  904
              C  +  RYRSLKHFNYD+CQSCFFSGR AKGHK+HYPMVEYC P +
Sbjct  44948  CSFLHHRYRSLKHFNYDVCQSCFFSGRTAKGHKLHYPMVEYCIPVS  44811


 Score = 68.9 bits (167),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 40/50 (80%), Gaps = 0/50 (0%)
 Frame = -2

Query  337     RSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQND  386
               R+HLEAS+++W RL  SL+EL+ WL +KD+EL +Q PIGGD PA+Q Q D
Sbjct  134032  RAHLEASAEKWNRLLASLEELIKWLNMKDEELKKQMPIGGDVPALQLQYD  133883


 Score = 67.0 bits (162),  Expect = 7e-08, Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 47/59 (79%), Gaps = 0/59 (0%)
 Frame = -2

Query  280     DLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRS  338
               D+Q EI+AH D++ ++D N QK++++L  S++A +LQ RLD+MN +W++L+ KS +IRS
Sbjct  146749  DIQAEIDAHNDIFKSIDGNRQKMVKALGNSEEATMLQHRLDDMNQRWNDLKAKSASIRS  146573


 Score = 62.8 bits (151),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 39/53 (73%), Positives = 46/53 (86%), Gaps = 0/53 (0%)
 Frame = -3

Query  993    DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  1045
              +DEH LIQ YCQ+L  +SP+SQP+SPAQIL S+E EERGELERI+ADLEEE R
Sbjct  15129  EDEHALIQQYCQTLGGESPVSQPQSPAQILKSVEREERGELERIIADLEEEQR  14971


 Score = 53.9 bits (128),  Expect = 5e-04, Method: Compositional matrix adjust.
 Identities = 25/33 (75%), Positives = 29/33 (87%), Gaps = 0/33 (0%)
 Frame = -1

Query  631    LYQSLADLNNVRFSAYRTAMKLRRLQKALCLDL  663
              L+   ADLNNVRFSAYRTA+K+RRLQKALC +L
Sbjct  71912  LFSISADLNNVRFSAYRTAIKIRRLQKALCREL  71814


 Score = 53.1 bits (126),  Expect = 9e-04, Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 29/32 (90%), Gaps = 0/32 (0%)
 Frame = -3

Query  567    LQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQ  598
              +QV+V+DR++QL EAHRDFGP+SQHFLS+  Q
Sbjct  87033  VQVSVDDRLKQLQEAHRDFGPSSQHFLSSKYQ  86938


 Score = 48.1 bits (113),  Expect = 0.034, Method: Compositional matrix adjust.
 Identities = 19/30 (63%), Positives = 24/30 (80%), Gaps = 0/30 (0%)
 Frame = -2

Query  612    YYINHETQTTCWDHPKMTELYQSLADLNNV  641
              +  +H+TQTTCWDHPKMTEL+QSL +   V
Sbjct  73789  FLPSHQTQTTCWDHPKMTELFQSLGECCCV  73700


 Score = 46.6 bits (109),  Expect = 0.097, Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 0/52 (0%)
 Frame = -1

Query  519    KALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVA  570
              +A R EIAP+   V  +NDL+ QL+ L +  S      L+DLN RWKLLQV+
Sbjct  89909  QAFREEIAPINLKVKTMNDLSSQLSPLDLHPSLKMSRQLDDLNMRWKLLQVS  89754


 Score = 44.7 bits (104),  Expect = 0.36, Method: Compositional matrix adjust.
 Identities = 19/29 (65%), Positives = 24/29 (82%), Gaps = 0/29 (0%)
 Frame = -2

Query  1168  GEEDLLSPPQDTSTGLEEVMEQLNNSFPS  1196
               EDLL+PP DTST L +VMEQ+N++FPS
Sbjct  9940  ASEDLLAPPHDTSTDLTDVMEQINSTFPS  9854


 Score = 40.0 bits (92),  Expect = 7.7, Method: Compositional matrix adjust.
 Identities = 17/23 (73%), Positives = 20/23 (86%), Gaps = 0/23 (0%)
 Frame = -3

Query  948    TPASSPQLSHDDTHSRIEHYASR  970
              +P+ SPQL HDDTHSRIE YA+R
Sbjct  23784  SPSQSPQLFHDDTHSRIEQYATR  23716


>gb|L04186.1|HUMDYSDMD Homo sapiens dystrophin (DMD) gene, exon 57
Length=343

 Score =  114 bits (286),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 57/75 (76%), Positives = 63/75 (84%), Gaps = 2/75 (2%)
 Frame = +1

Query  318  RLDNMNFKWSELRKKSL--NIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIG  375
            R+ N   ++S++ +  L    RSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIG
Sbjct  22   RIINYTSRYSDMDRCCLLFFFRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIG  201

Query  376  GDFPAVQKQNDVHRA  390
            GDFPAVQKQNDVHR 
Sbjct  202  GDFPAVQKQNDVHRV  246


>gb|L22094.1|MUSUTROPH Mouse utrophin (Dmd1) gene, one complete exon and two partial 
introns
Length=1286

 Score =  114 bits (286),  Expect = 3e-22, Method: Composition-based stats.
 Identities = 50/64 (78%), Positives = 54/64 (84%), Gaps = 0/64 (0%)
 Frame = +2

Query  807  FQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRY  866
            F   NNKPEI    F+DWM LEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI+GFR 
Sbjct  722  FPQNNNKPEISVKEFIDWMHLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIVGFR*  901

Query  867  RSLK  870
             +L+
Sbjct  902  EALR  913


>gb|AC079864.22| Homo sapiens Xp BAC RP11-662G16 (Roswell Park Cancer Institute 
Human BAC Library) complete sequence
Length=161874

 Score =  114 bits (285),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 54/55 (98%), Positives = 54/55 (98%), Gaps = 0/55 (0%)
 Frame = -2

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKA  55
              MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQK 
Sbjct  40532  MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKV  40368


>gb|AF213436.1|AF213436 Homo sapiens dystrophin (DMD) gene, exon 51 and partial cds
Length=907

 Score =  114 bits (285),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 54/55 (98%), Positives = 54/55 (98%), Gaps = 0/55 (0%)
 Frame = +1

Query  1    MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKA  55
            MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQK 
Sbjct  502  MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKV  666


>emb|X51934.1| Human dystrophin gene, exon 51 with flanking sequence
Length=3159

 Score =  114 bits (285),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 54/55 (98%), Positives = 54/55 (98%), Gaps = 0/55 (0%)
 Frame = +2

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKA  55
             MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQK 
Sbjct  1709  MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKV  1873


>gb|M65035.1|HUMDYSGP Human dystrophin gene deletion junction fragment
Length=2202

 Score =  114 bits (285),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 54/55 (98%), Positives = 54/55 (98%), Gaps = 0/55 (0%)
 Frame = +2

Query  1     MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKA  55
             MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQK 
Sbjct  1046  MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKV  1210


>emb|AL357149.13| Human DNA sequence from clone RP11-352E13 on chromosome 6 Contains 
the 3' end of the UTRN gene for utrophin (homologous to 
dystrophin), complete sequence
Length=201399

 Score =  114 bits (285),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 61/82 (74%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
 Frame = +2

Query  1045   RNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQ  1104
              RNLQ EY++LK QH  +GL P+ SPPE + +   +  D+ELIAEAKLLRQHKGRLEARMQ
Sbjct  27986  RNLQVEYEQLKDQHLRRGL-PVGSPPESIISPHHTSEDSELIAEAKLLRQHKGRLEARMQ  28162

Query  1105   ILEDHNKQLESQLHRLRQLLEQ  1126
              ILEDHNKQLESQLHRLRQLLEQ
Sbjct  28163  ILEDHNKQLESQLHRLRQLLEQ  28228


 Score = 94.4 bits (233),  Expect = 4e-16, Method: Compositional matrix adjust.
 Identities = 41/46 (89%), Positives = 45/46 (97%), Gaps = 0/46 (0%)
 Frame = +2

Query  903    TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET  948
              TTSGEDVRDF KVLKNKFR+K+YFAKHPR+GYLPVQTVLEGDN+ET
Sbjct  12569  TTSGEDVRDFTKVLKNKFRSKKYFAKHPRLGYLPVQTVLEGDNLET  12706


 Score = 61.6 bits (148),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 39/53 (73%), Positives = 46/53 (86%), Gaps = 0/53 (0%)
 Frame = +3

Query  993    DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  1045
              +DEH LIQ YCQ+L  +SP+SQP+SPAQIL S+E EERGELERI+ADLEEE R
Sbjct  27468  EDEHALIQQYCQTLGGESPVSQPQSPAQILKSVEREERGELERIIADLEEEQR  27626


 Score = 45.1 bits (105),  Expect = 0.29, Method: Compositional matrix adjust.
 Identities = 19/28 (67%), Positives = 24/28 (85%), Gaps = 0/28 (0%)
 Frame = +2

Query  1170   EDLLSPPQDTSTGLEEVMEQLNNSFPSS  1197
              EDLL+PP DTST L EVMEQ++++FPS 
Sbjct  32432  EDLLAPPHDTSTDLTEVMEQIHSTFPSC  32515


 Score = 40.0 bits (92),  Expect = 7.7, Method: Compositional matrix adjust.
 Identities = 17/23 (73%), Positives = 20/23 (86%), Gaps = 0/23 (0%)
 Frame = +3

Query  948    TPASSPQLSHDDTHSRIEHYASR  970
              +P+ SPQL HDDTHSRIE YA+R
Sbjct  19296  SPSQSPQLFHDDTHSRIEQYATR  19364


>emb|X16089.1| Human Cf56a/Cf23a region DNA for an exon of Duchenne Muscular 
Dystrophy locus
Length=357

 Score =  114 bits (284),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 54/55 (98%), Positives = 54/55 (98%), Gaps = 0/55 (0%)
 Frame = +1

Query  1    MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKA  55
            MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQK 
Sbjct  61   MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKV  225


>gb|S38776.1| Homo sapiens dystrophin (DMD) mRNA, partial cds, alternatively 
spliced
Length=300

 Score =  112 bits (281),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 52/53 (98%), Positives = 52/53 (98%), Gaps = 0/53 (0%)
 Frame = +1

Query  615  NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLS  667
             HETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLS
Sbjct  142  GHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLS  300


>emb|CR954286.2| Pan troglodytes chromosome X BAC RP43-001A02, complete sequence
Length=186572

 Score =  112 bits (280),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 54/55 (98%), Gaps = 0/55 (0%)
 Frame = -2

Query  1      MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKA  55
              MPSSLMLEVPALADFNRAWTELTDWLSLLD+VIKSQRVMVGDLEDINEMIIKQK 
Sbjct  96403  MPSSLMLEVPALADFNRAWTELTDWLSLLDRVIKSQRVMVGDLEDINEMIIKQKV  96239


 Score = 79.3 bits (194),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 39/40 (97%), Positives = 40/40 (100%), Gaps = 0/40 (0%)
 Frame = -1

Query  54     KATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR  93
              +ATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR
Sbjct  49949  QATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDR  49830


>emb|AL513184.7| Human DNA sequence from clone RP11-386H19 on chromosome 6 Contains 
part of the UTRN gene for utrophin (homologous to dystrophin), 
complete sequence
Length=81461

 Score =  112 bits (279),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 47/89 (52%), Positives = 71/89 (79%), Gaps = 0/89 (0%)
 Frame = +2

Query  430    ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLK  489
              EL PEERAQ + + +RKQ+ EV  +WE LN  +++WQ+++D+ LE+L++LQ A D+LD  
Sbjct  21293  ELTPEERAQKIAKAMRKQSSEVKEKWESLNAVTSNWQKQVDKALEKLRDLQGAMDDLDAD  21472

Query  490    LRQAEVIKGSWQPVGDLLIDSLQDHLEKV  518
              +++AE ++  W+PVGDLLIDSLQDH+EK+
Sbjct  21473  MKEAESVRNGWKPVGDLLIDSLQDHIEKI  21559


 Score =  110 bits (276),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 49/59 (83%), Positives = 51/59 (86%), Gaps = 0/59 (0%)
 Frame = +3

Query  807    FQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFR  865
              F   NNKPEI    F+DWM LEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPI+GFR
Sbjct  70863  FHQNNNKPEISVKEFIDWMHLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIVGFR  71039


 Score = 97.1 bits (240),  Expect = 5e-17, Method: Compositional matrix adjust.
 Identities = 45/61 (73%), Positives = 51/61 (83%), Gaps = 0/61 (0%)
 Frame = +2

Query  748    KAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCF  807
              K +L   +  LFK+VA  T  CDQR+LGLLLHD+IQIPRQLGEVA+FGGSNIEPSVRSCF
Sbjct  66854  KVNLLPLFADLFKEVAGPTEMCDQRQLGLLLHDAIQIPRQLGEVAAFGGSNIEPSVRSCF  67033

Query  808    Q  808
              Q
Sbjct  67034  Q  67036


 Score = 89.0 bits (219),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 42/63 (66%), Positives = 47/63 (74%), Gaps = 0/63 (0%)
 Frame = +3

Query  666    LSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNV  725
              LS   +   QH L QNDQ + +  +INCLTT YD LEQ H +LVNVPLCVDMCLNWLLNV
Sbjct  54984  LSTTNEIFKQHKLNQNDQLLSVPDVINCLTTTYDGLEQMHKDLVNVPLCVDMCLNWLLNV  55163

Query  726    YDT  728
              YDT
Sbjct  55164  YDT  55172


 Score = 87.0 bits (214),  Expect = 6e-14, Method: Compositional matrix adjust.
 Identities = 34/41 (82%), Positives = 38/41 (92%), Gaps = 0/41 (0%)
 Frame = +2

Query  865    RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTS  905
              RYRSLKHFNYD+CQSCFFSGR AKGHK+HYPMVEYC P ++
Sbjct  76082  RYRSLKHFNYDVCQSCFFSGRTAKGHKLHYPMVEYCIPVST  76204


 Score = 54.3 bits (129),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 24/29 (82%), Positives = 27/29 (93%), Gaps = 0/29 (0%)
 Frame = +3

Query  636    ADLNNVRFSAYRTAMKLRRLQKALCLDLL  664
              ADLNNVRFSAYRTA+K+RRLQKALC +L 
Sbjct  47337  ADLNNVRFSAYRTAIKIRRLQKALCCELF  47423


 Score = 52.8 bits (125),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 19/27 (70%), Positives = 25/27 (92%), Gaps = 0/27 (0%)
 Frame = +1

Query  610    VPYYINHETQTTCWDHPKMTELYQSLA  636
              +P++ +H+TQTTCWDHPKMTEL+QSL 
Sbjct  44938  LPFFSSHQTQTTCWDHPKMTELFQSLG  45018


 Score = 52.0 bits (123),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 21/29 (72%), Positives = 28/29 (96%), Gaps = 0/29 (0%)
 Frame = +3

Query  567    LQVAVEDRVRQLHEAHRDFGPASQHFLST  595
              +QV+V+DR++QL EAHRDFGP+SQHFLS+
Sbjct  27762  VQVSVDDRLKQLQEAHRDFGPSSQHFLSS  27848


 Score = 47.8 bits (112),  Expect = 0.038, Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 0/51 (0%)
 Frame = +2

Query  520    ALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVA  570
              A R EIAP+   V  VNDL+ QL+ L +  S      L+DLN RWKLLQV+
Sbjct  24854  AFREEIAPINFKVKTVNDLSSQLSPLDLHPSLKMSRQLDDLNMRWKLLQVS  25006


 Score = 40.0 bits (92),  Expect = 8.5, Method: Compositional matrix adjust.
 Identities = 18/28 (64%), Positives = 22/28 (78%), Gaps = 0/28 (0%)
 Frame = +2

Query  729    GRTGRIRVLSFKTGIISLCKAHLEDKYR  756
              GRTG+IRV S K G++SL K  LE+KYR
Sbjct  62243  GRTGKIRVQSLKIGLMSLSKGLLEEKYR  62326


>gb|AC187490.2| Rhesus macaque BAC clone CH250-77H12 from chromosome unknown, 
complete sequence
Length=176231

 Score =  111 bits (278),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 59/82 (71%), Positives = 67/82 (81%), Gaps = 1/82 (1%)
 Frame = -2

Query  1045    RNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQ  1104
               RNLQ EY++LK QH  +   P+ SPPE + +   +  D+ELIAEAKLLRQHKGRLEARMQ
Sbjct  174148  RNLQVEYEQLKDQHLRRAF-PIGSPPESIVSPHHTSEDSELIAEAKLLRQHKGRLEARMQ  173972

Query  1105    ILEDHNKQLESQLHRLRQLLEQ  1126
               ILEDHNKQLESQLHRLRQLLEQ
Sbjct  173971  ILEDHNKQLESQLHRLRQLLEQ  173906


 Score = 61.6 bits (148),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 39/53 (73%), Positives = 46/53 (86%), Gaps = 0/53 (0%)
 Frame = -1

Query  993     DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  1045
               +DEH LIQ YCQ+L  +SP+SQP+SPAQIL S+E EERGELERI+ADLEEE R
Sbjct  174983  EDEHALIQQYCQTLGGESPVSQPQSPAQILKSVEREERGELERIIADLEEEQR  174825


 Score = 43.9 bits (102),  Expect = 0.52, Method: Compositional matrix adjust.
 Identities = 19/27 (70%), Positives = 24/27 (88%), Gaps = 0/27 (0%)
 Frame = -2

Query  1170    EDLLSPPQDTSTGLEEVMEQLNNSFPS  1196
               EDLL+PP DTST L EVMEQ++++FPS
Sbjct  169708  EDLLAPPHDTSTDLTEVMEQIHSTFPS  169628


>gb|AY390386.1| Rattus norvegicus dystrophin-related mRNA, partial cds
Length=223

 Score =  111 bits (277),  Expect = 3e-21, Method: Composition-based stats.
 Identities = 49/55 (89%), Positives = 51/55 (92%), Gaps = 0/55 (0%)
 Frame = +2

Query  709  VNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVA  763
            +  PLCVDMCLNWLLNV +TGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQV 
Sbjct  56   IACPLCVDMCLNWLLNVCNTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVG  220


>emb|Z81522.1| Caenorhabditis elegans Cosmid F32B4, complete sequence
Length=41212

 Score =  110 bits (276),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 51/92 (55%), Positives = 64/92 (69%), Gaps = 5/92 (5%)
 Frame = -2

Query  851    AKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVR  910
              +KCN+CK  PIIG RYR L  FN D+CQ+CFFS R AK H+ ++PM EYC  TTS +D R
Sbjct  32166  SKCNVCKMFPIIGIRYRCLTCFNCDLCQNCFFSQRTAKSHRTNHPMQEYCEKTTSSDDAR  31987

Query  911    DFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLE  942
              DFAK+++NKFR     A   + GYLP+   LE
Sbjct  31986  DFAKMIRNKFR-----ASKRQKGYLPIDVSLE  31906


 Score = 62.8 bits (151),  Expect(2) = 1e-11, Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 64/153 (41%), Gaps = 50/153 (32%)
 Frame = -1

Query  723    LNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYR-------------YLFK---QVASST  766
              L  +   R G +RVLSFK  +I      LE+KYR             +L     Q++   
Sbjct  33457  LTYFCRSRDGIMRVLSFKIAMIVFSNIPLEEKYRCTLFF*LPVP*NRFLISRSFQISFPG  33278

Query  767    GFCDQRR------------------LG---------------LLLHDSIQIPRQLGEVAS  793
                CD +                   LG               +   DS QIPR +GE A+
Sbjct  33277  RSCDPKTNCIAFI*SYPRKCFIDLFLGNNSFWFLKKIDFW*IIDFFDS-QIPRLVGESAA  33101

Query  794    FGGSNIEPSVRSCFQFANNKPEIEAALFLDWMR  826
              FGG+N+EPSVRSCF+     P I    F+DW++
Sbjct  33100  FGGTNVEPSVRSCFETVRLAPTISEGAFIDWVK  33002


 Score = 37.0 bits (84),  Expect(2) = 1e-11, Method: Compositional matrix adjust.
 Identities = 13/22 (59%), Positives = 18/22 (81%), Gaps = 0/22 (0%)
 Frame = -3

Query  828    EPQSMVWLPVLHRVAAAETAKH  849
              EPQS+VWL V+HR+  +E+ KH
Sbjct  32954  EPQSIVWLAVMHRLVISESTKH  32889


 Score = 77.8 bits (190),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
 Frame = -3

Query  618    TQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHN  677
              ++ T W+HP   E+ + L+  N V+F AYRTAMKLR LQK LCLDL+ L+    A  +  
Sbjct  34535  SEKTQWEHPVWVEIVKELSQFNRVKFLAYRTAMKLRALQKRLCLDLVDLTLLEKAFVRLK  34356

Query  678    LKQNDQPMDILQIINCLTTIYDRLEQEHNNLV-NVPLCVDMCLNWLLNVYD  727
                  ++   +  ++  L  +Y+ L  ++ N V +V L VD+C+N+LLN++D
Sbjct  34355  GLSAEECPGLEGMVCALLPMYEALHAKYPNQVQSVSLAVDICINFLLNLFD  34203


 Score = 53.5 bits (127),  Expect(2) = 2e-08, Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
 Frame = -2

Query  560    LNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAIS-PNKVPYYI  614
              L  R+  L+ A+  R   +  A  DFGP S+HFL+ SV  PW+RAIS  N +PYYI
Sbjct  35235  LRFRYSTLKRAIRIRQAAVRNAASDFGPTSEHFLNQSVTLPWQRAISKSNLLPYYI  35068


 Score = 35.0 bits (79),  Expect(2) = 2e-08, Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 0/121 (0%)
 Frame = -3

Query  448    AEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLL  507
               E +   W +L +    W + +   ++RLQEL+    E  L L  +E    + + V  + 
Sbjct  35654  CERLKKNWAELGIEVESWDKLVQHAMQRLQELERNLAECQLHLTSSENEIETMKAVEKIH  35475

Query  508    IDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL  567
              ++ L+   E+   +   I  ++  V  VND A +L    ++L  +    +E +N R  LL
Sbjct  35474  LEDLKIAREETDQISKRIDEVRLFVDDVNDAAARLLAEDLKLDEHAKGQIEHVNKR*VLL  35295

Query  568    Q  568
              +
Sbjct  35294  E  35292


 Score = 52.8 bits (125),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 0/90 (0%)
 Frame = -3

Query  329    LRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVH  388
              + KK L  R  LE +  +W++L   L +LL W++ K   +  + P GG   AV +Q    
Sbjct  37415  ISKKKLFFRERLEKAEQEWEKLSDGLADLLSWVEAKKQAIMDEQPTGGSLSAVMQQASFV  37236

Query  389    RAFKRELKTKEPVIMSTLETVRIFLTEQPL  418
              +  +RE+++K     ST+E    FL +  L
Sbjct  37235  KGLQREIESKTANYKSTVEEAHSFLMQHDL  37146


 Score = 51.6 bits (122),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 0/125 (0%)
 Frame = -2

Query  212    SIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGV  271
              S H  +  R A LE + R  + F   L +F  WL+  E   + L   T   + ++D+   
Sbjct  38094  STHFSIRIRRAVLEASLRSRRDFHSALSEFEKWLSRQEDNCSKLSADTSNHQAIKDTSKR  37915

Query  272    KELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRK  331
              K   + ++ L  E+ AH DV  ++++  + +  SLE  ++ V L +R+     +W+ LRK
Sbjct  37914  KNWTQSFKTLNAELNAHEDVMKSVEKMGKMLAESLESGNEKVELLKRVGETTRRWTALRK  37735

Query  332    KSLNI  336
               +  I
Sbjct  37734  TTNEI  37720


 Score = 42.4 bits (98),  Expect = 1.7, Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 32/42 (76%), Gaps = 0/42 (0%)
 Frame = -3

Query  1084   ELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLE  1125
              +++ EAK LR HK RLE R +ILE  N+QLE QL RL+++++
Sbjct  29219  QVMDEAKALRLHKQRLEHRSRILEQQNEQLEMQLQRLKKVID  29094


>gb|AC112800.6| Rattus norvegicus X BAC CH230-275F1 (Children's Hospital Oakland 
Research Institute) complete sequence
Length=147560

 Score =  110 bits (276),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 52/55 (94%), Positives = 54/55 (98%), Gaps = 0/55 (0%)
 Frame = +3

Query  1       MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKA  55
               MPSSL+LEVPALADFNRAWTELTDWLSLLD+VIKSQRVMVGDLEDINEMIIKQK 
Sbjct  113562  MPSSLLLEVPALADFNRAWTELTDWLSLLDRVIKSQRVMVGDLEDINEMIIKQKV  113726


>gb|DQ788695.1| Danio rerio dystrophin isoform Dp116 mRNA, partial cds, alternatively 
spliced
Length=315

 Score =  110 bits (276),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 52/86 (60%), Positives = 69/86 (80%), Gaps = 0/86 (0%)
 Frame = +3

Query  279  QDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRS  338
            +DLQ EI+AH + YH+LDEN  +I+ SLEG+D+AV+LQ+RLD+M  +W EL  K ++IR 
Sbjct  54   KDLQAEIDAHRETYHSLDENGHRIVSSLEGTDNAVVLQKRLDDMGQRWHELCNKVMSIRP  233

Query  339  HLEASSDQWKRLHLSLQELLVWLQLK  364
            +L+A  DQWK LH+SLQELL WLQLK
Sbjct  234  YLDAGVDQWKHLHMSLQELLNWLQLK  311


>gb|AF213439.1|AF213439 Homo sapiens dystrophin (DMD) gene, exon 54 and partial cds
Length=589

 Score =  109 bits (272),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 52/52 (100%), Positives = 52/52 (100%), Gaps = 0/52 (0%)
 Frame = +2

Query  165  QLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKR  216
            QLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKR
Sbjct  269  QLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKR  424


>gb|M86898.1|HUMDYST15 H.sapiens dystrophin gene, exon 74
Length=299

 Score =  107 bits (268),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 54/55 (98%), Positives = 54/55 (98%), Gaps = 0/55 (0%)
 Frame = +2

Query  991   SIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  1045
             S DDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR
Sbjct  65    SRDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENR  229


>gb|U01229.1|U01229 Torpedo californica dystrophin mRNA, partial cds
Length=865

 Score =  107 bits (267),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 49/62 (79%), Positives = 59/62 (95%), Gaps = 0/62 (0%)
 Frame = +1

Query  1    MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDL  60
            MPSSL+++VPALADFN+AW ELTDWLSLLD+VIKSQ V VGD+E+IN+MIIKQKAT+QDL
Sbjct  679  MPSSLLMDVPALADFNKAWVELTDWLSLLDRVIKSQLVTVGDVEEINDMIIKQKATLQDL  858

Query  61   EQ  62
            +Q
Sbjct  859  DQ  864


>dbj|AK296450.1| Homo sapiens cDNA FLJ56097 complete cds, highly similar to Homo 
sapiens dystrobrevin, alpha (DTNA), transcript variant 2, 
mRNA
Length=1932

 Score =  107 bits (266),  Expect = 6e-20, Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 172/392 (43%), Gaps = 58/392 (14%)
 Frame = +2

Query  849   HQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGED  908
             H  +C+ C    ++GFRYR  +  NY +CQ CF+ G     H   + M EY +       
Sbjct  209   HPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTS-------  367

Query  909   VRDFAKVLKNKFRTKRYFA--KHPRMGYLPVQTVLEGDNMETPASSPQLSHDDT---HSR  963
              +  AK L N        A  + P     P Q     +        P  S +DT   HS 
Sbjct  368   WKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHS-  544

Query  964   IEHYASRLAEMENSNGSYLNDS-ISPNESIDDEHLLIQHYCQSLNQDSPLSQP---RSPA  1019
                       + +S   ++  S +  +  +D+EH LI  Y   L  +S  SQP   RS  
Sbjct  545   ----------VPSSGSPFITRSMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAP  694

Query  1020  QILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQS  1079
              I  ++++ +  +  +++A+LE +NR +  E  RL+ +HE +   P P   +  PT    
Sbjct  695   DISFTIDANK--QQRQLIAELENKNREILQEIQRLRLEHE-QASQPTPEKAQQNPT----  853

Query  1080  PRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVS  1139
                  L+AE +LLRQ K  LE RM  L++  ++L  QL  L +LL+   A     G+  S
Sbjct  854   -----LLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKTQGA-----GSPRS  1003

Query  1140  SPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRG  1199
             SPS ++ R     PM +R   + ++ +         PQD+ TG   V   +  +F  S  
Sbjct  1004  SPSHTISRPI---PMPIRSASACSTPTHT-------PQDSLTG---VGGDVQEAFAQSSR  1144

Query  1200  HNV-GSLFHMADDLGRAMESLVSVMTDEEGAE  1230
              N+   L   AD +   M SLV  +  E G+E
Sbjct  1145  RNLRNDLLVAADSITNTMSSLVKELNSEVGSE  1240


>gb|AC192936.3| Pan troglodytes BAC clone CH251-433G11 from chromosome x, complete 
sequence
Length=189198

 Score =  103 bits (257),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 50/52 (96%), Positives = 52/52 (100%), Gaps = 0/52 (0%)
 Frame = +1

Query  519   KALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVA  570
             +ALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQV+
Sbjct  3433  QALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVS  3588


 Score = 60.5 bits (145),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 27/28 (96%), Positives = 28/28 (100%), Gaps = 0/28 (0%)
 Frame = +3

Query  568    QVAVEDRVRQLHEAHRDFGPASQHFLST  595
              QVAVEDRVRQLHEAHRDFGPASQHFLS+
Sbjct  99678  QVAVEDRVRQLHEAHRDFGPASQHFLSS  99761


 Score = 50.8 bits (120),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 21/23 (91%), Positives = 21/23 (91%), Gaps = 0/23 (0%)
 Frame = +3

Query  592     FLSTSVQGPWERAISPNKVPYYI  614
               F S SVQGPWERAISPNKVPYYI
Sbjct  129240  FFSASVQGPWERAISPNKVPYYI  129308


>emb|CR955037.3| Pan troglodytes chromosome X BAC RP43-016I09, complete sequence
Length=201964

 Score =  103 bits (257),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 50/52 (96%), Positives = 52/52 (100%), Gaps = 0/52 (0%)
 Frame = +3

Query  519    KALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVA  570
              +ALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQV+
Sbjct  26703  QALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVS  26858


 Score = 60.5 bits (145),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 27/28 (96%), Positives = 28/28 (100%), Gaps = 0/28 (0%)
 Frame = +2

Query  568     QVAVEDRVRQLHEAHRDFGPASQHFLST  595
               QVAVEDRVRQLHEAHRDFGPASQHFLS+
Sbjct  122777  QVAVEDRVRQLHEAHRDFGPASQHFLSS  122860


 Score = 50.8 bits (120),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 21/23 (91%), Positives = 21/23 (91%), Gaps = 0/23 (0%)
 Frame = +2

Query  592     FLSTSVQGPWERAISPNKVPYYI  614
               F S SVQGPWERAISPNKVPYYI
Sbjct  152294  FFSASVQGPWERAISPNKVPYYI  152362


>gb|M86884.1|HUMDYST01 H.sapiens dystrophin gene, exon 60
Length=332

 Score =  103 bits (257),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 50/52 (96%), Positives = 52/52 (100%), Gaps = 0/52 (0%)
 Frame = +2

Query  519  KALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVA  570
            +ALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQV+
Sbjct  143  QALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVS  298


>ref|XM_968674.2| PREDICTED: Tribolium castaneum similar to kakapo (LOC662585), 
mRNA
Length=25598

 Score =  102 bits (255),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 103/474 (21%), Positives = 214/474 (45%), Gaps = 33/474 (6%)
 Frame = +1

Query  59     DLEQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEM  118
              +++Q +P+++++  + ++L  +   +  +  +   IE + N WD +      R + L + 
Sbjct  20863  EIDQTKPEVDQVRASGKDLM-RLCGEPDKPEVKKHIEDLDNAWDNITALYAKREENLIDA  21039

Query  119    LKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYT--VDAIQKKITETKQLAKDLRQWQTN  176
              ++ + ++ E  +     L +A  K    K GP    +DA++K+I + K    ++      
Sbjct  21040  MEKAMEFHETLQNLLAFLDKAEKKFA--KMGPLGTDIDAVKKQIDQLKNFKAEVDPHMVK  21213

Query  177    VDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPL  236
              V+  N  A +L    SAD    +      +N  W  + + + ER+  LE     L QF  
Sbjct  21214  VEALNRQAQELTERTSADQAAAIKEPLSGVNKRWDDLLRGIVERQRQLENALLRLGQFQH  21393

Query  237    DLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLD  296
               L + L W+++ + T + L+      ++LE      EL K  + L  +I+AH      L+
Sbjct  21394  ALNELLVWISKTDKTLDELKPVQGDPQILE-----IELAK-LKVLVNDIQAHQTSVDTLN  21555

Query  297    ENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQE  356
              +  ++I+ + EGSD+A + Q +L+ +N +W  L +K+ + +  LE S ++ +R +  +Q+
Sbjct  21556  DAGRQIIETGEGSDEASITQDKLNTLNTQWRALMQKAADRQRELEDSLNEAQRFNAEIQD  21735

Query  357    LLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQ  416
              LL WL   D  ++   P+GG      +Q +       E++   P + + L   + +L   
Sbjct  21736  LLSWLCDVDGIITASKPVGGLPETASEQLERFMEIYNEIEDNRPKVETVLAQGQEYL---  21906

Query  417    PLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERL  476
                                 +  N    L+     +   W+ +   + D + K++  L+  
Sbjct  21907  ------------------RKGSNAASNLQHNLRTLKQRWDSVTSRANDKKIKLEIALKEA  22032

Query  477    QELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKE  530
               E  EA +     L  AE I  + +PV  +L +++Q  +E+ K  + +++  +E
Sbjct  22033  TEFHEALENFVEWLTNAEKILSNLKPVSRVL-ETIQGQMEEHKIFQKDVSAHRE  22191


 Score = 91.3 bits (225),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 93/400 (23%), Positives = 187/400 (46%), Gaps = 19/400 (4%)
 Frame = +1

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              FN    +L  WL  +D +I + + + G  E  +E + +      ++E  RP++E ++   
Sbjct  21715  FNAEIQDLLSWLCDVDGIITASKPVGGLPETASEQLERFMEIYNEIEDNRPKVETVLAQG  21894

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              Q    K SN  A + +   +  ++ +WD V     +++ +L   LK++T++ EA E   +
Sbjct  21895  QEYLRKGSN--AASNLQHNLRTLKQRWDSVTSRANDKKIKLEIALKEATEFHEALENFVE  22068

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL--LRDYS  192
               L  A   L + K     ++ IQ ++ E K   KD+     + ++  DL  K   L+ +S
Sbjct  22069  WLTNAEKILSNLKPVSRVLETIQGQMEEHKIFQKDV---SAHREIMLDLDKKGTHLKYFS  22239

Query  193    -ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT  251
                 D   +  +  ++   W  +  + +ER  AL+  ++  ++F       + WL E E +
Sbjct  22240  QKQDVILIKNLLVSVQHRWERVASKSAERTRALDLGYKEAKEFHDGWSGLMTWLNETEDS  22419

Query  252    ANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDD  311
               + L      E +  D + +K  + + Q+ Q  + A    Y ++   + K+L+      D
Sbjct  22420  LDRL----LSESVGNDPEAIKSRLHKHQEFQRNLSAKQGTYDHV-MKTGKVLKEKAPKSD  22584

Query  312    AVLLQRRLDNMNFKWSELRKKSLNIRSHLEAS---SDQWKRLHLSLQELLVWLQLKDDEL  368
                 +++ + ++  KW+ +  KS++ +  LE +   S Q+K    ++  LL WL+  + EL
Sbjct  22585  EPTIRQMMSDLKAKWTAVCNKSVDRQRKLEEALLYSGQFKD---AIAALLQWLKKVEKEL  22755

Query  369    SRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLET  408
              S  +P+ GD   V    D+H  F++EL+ +   + S + T
Sbjct  22756  SVDSPVHGDLDTVNHLVDLHNQFEKELERRNEQMESVIRT  22875


 Score = 55.8 bits (133),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 82/390 (21%), Positives = 175/390 (44%), Gaps = 53/390 (13%)
 Frame = +1

Query  205    NINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERL  264
              ++   + ++ K++  ++A +E + R  +QF     K L WL++        +  +  E+L
Sbjct  16732  SVGRQYNALQKKLDHKKAEIEGSLRDGRQFEASCAKTLGWLSD--------ELGSLSEKL  16887

Query  265    LEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSL-EGSD--------DAVLL  315
              L     ++++++Q      ++  H  +Y ++     +++  L +G D        D+  L
Sbjct  16888  L--ISAIRDVLEQ------QLAHHEPIYRDVLAREHEVIMLLNKGRDMLARNNRSDSRSL  17043

Query  316    QRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIG  375
              QR LD +  +W +LRK++++ ++ L+   +  ++ +  L+  L WL+  +D+L    P  
Sbjct  17044  QRDLDKIQQQWEKLRKETVDRQTRLQTCKEHCRKYYKVLESFLPWLRQAEDKLDTLRPSS  17223

Query  376    GDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEE  435
                   ++KQ    +AF+ E+  K     +T      F++   ++              +E
Sbjct  17224  FQRKHIEKQLKELQAFRNEVWKKSGEYENTRTLGDTFVSACDID--------------KE  17361

Query  436    RAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEV  495
                +N    L+++ +++N +  +      D  RK+ +  E ++ELQ   +  + KL   + 
Sbjct  17362  VVKNELNDLKERWDKLNNDLIERTQALEDQSRKLADFNENIRELQHGVERCEDKLASHDA  17541

Query  496    IKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLS  555
              + G+ +             LE++KALR E A L++ +  V   A+ L +   Q +  +  
Sbjct  17542  LGGAARDPK---------LLERIKALREETAKLRKPLQTVKQQAQDLASEAAQ-NGIDAH  17691

Query  556    TLED----LNTRWKLLQVAVEDRVRQLHEA  581
               LED    L  R   L   ++DR  +L  A
Sbjct  17692  HLEDEVDSLGDRIDELTSKLDDRCSELQSA  17781


 Score = 54.7 bits (130),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 82/393 (20%), Positives = 167/393 (42%), Gaps = 23/393 (5%)
 Frame = +1

Query  12     LADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELI  71
              LADFN    EL   +   +  + S   + G   D  +++ + KA  ++  + R  L+ + 
Sbjct  17461  LADFNENIRELQHGVERCEDKLASHDALGGAARD-PKLLERIKALREETAKLRKPLQTVK  17637

Query  72     TAAQNLKNKTS-NQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKE  130
                AQ+L ++ + N      + D ++ + ++ DE+   L +R  +L       TQ+ E  +
Sbjct  17638  QQAQDLASEAAQNGIDAHHLEDEVDSLGDRIDELTSKLDDRCSELQSAATAVTQFNEQVK  17817

Query  131    EAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRD  190
                   L     +L+  K     +  ++ +I +  +    + +   +V+ A     +L+  
Sbjct  17818  GLSHDLTGLETELDEMKPPGRDLKTVRGQIDDIGRFLVKINKATDDVNDAIAAGERLVDS  17997

Query  191    YSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAET  250
                A DT +     E +      +  R   RE +LE+ H+ L+QF +             +
Sbjct  17998  GFAPDTAQTRQQVETLRKQLGKLDDRARSREQSLEDIHKKLEQFYM-------------S  18138

Query  251    TANVL---QDATRKERLLED-SKGVKELMKQWQDLQG----EIEAHTDVYHNLDENSQKI  302
               ANVL    DA+ + R L+     V  +  Q QD +      +E       N +   Q +
Sbjct  18139  HANVLDDIHDASEQLRKLKAVGSEVDSIRAQQQDFKKFRAKTVEPVGKAVENCNRVGQGL  18318

Query  303    LRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQ  362
              ++S     +  +L++ L+ MN +W++L+++  +    L+ +  Q  +   +L  L  WL 
Sbjct  18319  IQSAAPGVNTAILEKDLEKMNEQWNDLKERLNDRERRLDVALLQSGKFQEALDGLAKWLT  18498

Query  363    LKDDELSRQAPIGGDFPAVQKQNDVHRAFKREL  395
                ++ ++ Q P   D+  V+ Q    +  K+ L
Sbjct  18499  DTEELVANQKPPSADYKVVKAQLQEQKFLKKML  18597


 Score = 49.3 bits (116),  Expect = 0.014, Method: Compositional matrix adjust.
 Identities = 111/566 (19%), Positives = 225/566 (39%), Gaps = 54/566 (9%)
 Frame = +1

Query  9      VPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLE  68
              +P +  F+     L DW+   + V++S     GD+  +            DL++ RP LE
Sbjct  19423  LPLVKQFHNNHNRLVDWMQGAESVLQSAEPHEGDIARLE----------LDLQELRPVLE  19572

Query  69     ELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLN-------EMLKD  121
               +      L   +  + A T I   + R   ++D + E +Q R ++++       E+  D
Sbjct  19573  HINLLGPQLCQNSPGEGAST-IEGLVTRDNRRFDAIAEQIQRRAERIHLGKQRALEVTGD  19749

Query  122    STQWLEAKEEAEQVLGQARAKLESWKEGPYT-VDAIQKKITETKQLAKDLRQWQTNVDVA  180
                + LE   E E  +  A        E P    D I+ ++ E K L  D+   +  V   
Sbjct  19750  IDELLEWFREVESQIRDA--------EKPSAEPDLIRVQLKEHKALNDDISSQKGRVRDV  19905

Query  181    NDLALKLLRDY-SADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLE  239
                 A K+LR+   ++DT  +    E++  +  ++    S+R   LE+   L + F     
Sbjct  19906  LSTAKKVLRESPPSEDTSLIREKMEDLRETMDTVSALSSDRLGILEQALPLAEHFHDTHN  20085

Query  240    KFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENS  299
                  WL++ E   ++L     +  L+   +   E+  Q       I  H  +   L++  
Sbjct  20086  VLSNWLSDIEEQISMLAMPAMRPDLIAQQQDRNEMFIQ------SINDHKPLVDKLNKTG  20247

Query  300    QKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLV  359
              + ++R L   DD   +Q  LD+ N +++ L+ +    +  LE +  +  +    L+ +L 
Sbjct  20248  EALIR-LCNDDDGSKVQELLDSDNARYAALKLELRERQQALEQALQESSQFSDKLEGMLR  20424

Query  360    WLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLE  419
               L    D+++   PI    P ++ Q + + A   +L  ++    +        + + P  
Sbjct  20425  ALSNTADQVNNLEPISAHVPKIKDQIEDNDALISDLDKRKEAYAAVQRAADDVINKAP--  20598

Query  420    GLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQEL  479
                              R+    + ++++ +++   W+ +   + +  R +D+TL+  Q+ 
Sbjct  20599  ---------------NRSDPAIKDIKRKLDKLKNLWDDVQKATNNRGRSLDDTLDAAQKF  20733

Query  480    QEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLA  539
               +    +   L+  E    S +P   +   ++Q     ++ +R EI   K  V  V    
Sbjct  20734  WKELHAIMATLKDLEDSLVSQEPPA-VEPKAIQQQQVALQEIRHEIDQTKPEVDQVRASG  20910

Query  540    RQLTTL-GIQLSPYNLSTLEDLNTRW  564
              + L  L G    P     +EDL+  W
Sbjct  20911  KDLMRLCGEPDKPEVKKHIEDLDNAW  20988


 Score = 44.7 bits (104),  Expect = 0.35, Method: Compositional matrix adjust.
 Identities = 59/278 (21%), Positives = 117/278 (42%), Gaps = 10/278 (3%)
 Frame = +1

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F  A   L  WL  +++ +     + GDL+ +N ++       ++LE+R  Q+E +I   
Sbjct  22699  FKDAIAALLQWLKKVEKELSVDSPVHGDLDTVNHLVDLHNQFEKELERRNEQMESVIRTG  22878

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
               +L+ K +  +A T I  ++  +   W+ V +  + R  +L+E L ++ +  ++      
Sbjct  22879  TDLERKANRADA-TQIRSQLTELNELWNSVTKLTRIRSGRLDEALHEAERLHKSVHMLLD  23055

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +A  +L      P       +++    +   +L+  +   +   DLA  +L     D
Sbjct  23056  WLSEAERQLRFVGSTPEDEATAYEQLQALDRFRAELKDKEREKNHTLDLAQSVLAKAHPD  23235

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANV  254
                  +    + I + W  + +   +R   L    + L+     LE+ + WL   E T   
Sbjct  23236  AINVIKNWIKVIQSRWEEVSQWAMQRHQKLTAHMQSLRDLDECLEELIQWLLGLENTLIA  23415

Query  255    LQ------DATRKERLLEDSKGVKELMKQWQDLQGEIE  286
              L+      D    E+L+ D    KE M+  Q  QGE++
Sbjct  23416  LKREDLPMDIPATEQLIADH---KEFMENTQKRQGEVD  23520


 Score = 43.5 bits (101),  Expect = 0.75, Method: Compositional matrix adjust.
 Identities = 85/418 (20%), Positives = 171/418 (40%), Gaps = 38/418 (9%)
 Frame = +1

Query  14     DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITA  73
              +F+ A     +WL+  ++++ + + +   LE I   + + K   +D+   R  + +L   
Sbjct  22036  EFHEALENFVEWLTNAEKILSNLKPVSRVLETIQGQMEEHKIFQKDVSAHREIMLDLDKK  22215

Query  74     AQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQ---------  124
                +LK  +  Q+   +I + +  +Q++W+ V      R + L+   K++ +         
Sbjct  22216  GTHLKYFSQKQDV-ILIKNLLVSVQHRWERVASKSAERTRALDLGYKEAKEFHDGWSGLM  22392

Query  125    -WLEAKEEA-EQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVAND  182
               WL   E++ +++L       ES    P   +AI+ ++ + ++  ++L   Q   D    
Sbjct  22393  TWLNETEDSLDRLLS------ESVGNDP---EAIKSRLHKHQEFQRNLSAKQGTYDHVMK  22545

Query  183    LALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFL  242
                  L       D   +  +  ++ A W ++  +  +R+  LEE      QF   +   L
Sbjct  22546  TGKVLKEKAPKSDEPTIRQMMSDLKAKWTAVCNKSVDRQRKLEEALLYSGQFKDAIAALL  22725

Query  243    AWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKI  302
               WL + E   +V         +  D   V  L+      + E+E   +   ++      +
Sbjct  22726  QWLKKVEKELSV------DSPVHGDLDTVNHLVDLHNQFEKELERRNEQMESVIRTGTDL  22887

Query  303    LRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQ  362
               R    +D A  ++ +L  +N  W+ + K +      L+ +  + +RLH S+  LL WL 
Sbjct  22888  ERKANRAD-ATQIRSQLTELNELWNSVTKLTRIRSGRLDEALHEAERLHKSVHMLLDWLS  23064

Query  363    LKDDELSRQAPIGGDFP-----AVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTE  415
                  E  RQ    G  P     A ++   + R F+ ELK KE     TL+  +  L +
Sbjct  23065  ----EAERQLRFVGSTPEDEATAYEQLQALDR-FRAELKDKEREKNHTLDLAQSVLAK  23223


 Score = 43.1 bits (100),  Expect = 1.1, Method: Compositional matrix adjust.
 Identities = 35/175 (20%), Positives = 86/175 (49%), Gaps = 6/175 (3%)
 Frame = +1

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
               L  F    ++   W + + ++I+S+ +    +E   E  ++ +    + + +RP  EE+
Sbjct  15019  GLTAFLAGASQFEQWHASIVEIIESRELAKLSIE---EYAVRMQEIAANRDDKRPLFEEV  15189

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEA-K  129
              I   ++L NK    +   +  DR++ ++NQW E+   L + +Q+L++   +     EA +
Sbjct  15190  IKCGKDLLNKRDTTDTANV-RDRVKSMENQWRELG-SLLDEKQKLSKQRAEQLNAYEALR  15363

Query  130    EEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLA  184
              ++    L +  A++   +     ++ ++K+  E K + K+ + + + +D  ND+ 
Sbjct  15364  QQVCDWLSRFEARIARLEVVAIDIEILKKQNEELKPITKEYKDYSSTIDKVNDIG  15528


>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence
Length=21146708

 Features in this part of subject sequence:
   Dystrobrevin-like, isoform C
   Dystrobrevin-like, isoform D

 Score = 81.6 bits (200),  Expect(2) = 1e-18, Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
 Frame = +1

Query  731      TGRIRVLSFKTGIISLCKAHLEDKYRY---------------------LFKQVASSTGFC  769
                +G+IRV S K  + ++C   L DK R                      +F Q++   G  
Sbjct  8335675  SGKIRVFSIKVALATMCSGKLVDKLRCE*CTHHLITK*TRLKLFHRTDIFSQISDGAGQL  8335854

Query  770      DQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEP  829
                   +LG  L + + +P  + E  +F   + +  +      A NK  +   +        P
Sbjct  8335855  VAWKLGEFLREVLALPAAVYESPTF---HYKEGLEEEIFPAENKVTVNDFMATLMSEPGP  8336025

Query  830      QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKG  889
                  +VWLP++HR+A  ET  H   C++C +    GFRYR  +   Y +CQ CF+ G+ +  
Sbjct  8336026  SCLVWLPLVHRLATVETIVHPTVCSVCHKENFTGFRYRCQRCHAYQLCQECFWHGKTSLN  8336205

Query  890      HKMHYPMVEY  899
                H+  + + EY
Sbjct  8336206  HQNDHEVKEY  8336235


 Features in this part of subject sequence:
   Dystrobrevin-like, isoform C
   Dystrobrevin-like, isoform D

 Score = 41.2 bits (95),  Expect(2) = 1e-18, Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
 Frame = +2

Query  635      LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIIN  692
                L   +++RF++YRTA KLR +QK+  L L+ +    +A  ++ L   +    + + ++  
Sbjct  8335313  LQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSEVSVARLET  8335492

Query  693      CLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVY  726
                 ++++Y  L +       VP+     + LNWLL  Y
Sbjct  8335493  LVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAY  8335600


 Features in this part of subject sequence:
   short stop, isoform H
   short stop, isoform C

 Score = 49.7 bits (117),  Expect = 0.010, Method: Compositional matrix adjust.
 Identities = 51/256 (19%), Positives = 105/256 (41%), Gaps = 28/256 (10%)
 Frame = -3

Query  160      ITETKQLAKDLRQWQTNVDVANDLALKLLR-DYSADDTRKVHMITENINASWRSIHKRVS  218
                + + K LA D++  Q +VD  ND   +L+  +  + +          +N  W+ + ++ S
Sbjct  9761640  LAKLKVLANDIQAHQNSVDTLNDAGRQLIETEKGSVEASTTQEKLRKLNNEWKQLLQKAS  9761461

Query  219      EREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQW  278
                +R+  LEE  R    +  +++  L WL + +      +             G+ E   + 
Sbjct  9761460  DRQHELEEALREAHGYIAEVQDILGWLGDVDAVIGASKPVG----------GLPETATE-  9761314

Query  279      QDLQGEIEAHTDVYHNLDENSQK-----------ILRSLEGSDDAVLLQRRLDNMNFKWS  327
                     ++E   +VY+ LDEN  K           I R  +    +  LQ  L  +  +W 
Sbjct  9761313  -----QLERFMEVYNELDENRPKVETIQAQGQEYIKRQNQMKVSSSNLQHTLRTLKQRWD  9761149

Query  328      ELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDV  387
                 +  ++ + +  LE +  +    H +LQ  + WL   +  LS   P+      +Q Q + 
Sbjct  9761148  AVVSRASDKKIKLEIALKEATEFHDTLQAFVEWLTQAEKLLSNAEPVSRVLETIQAQMEE  9760969

Query  388      HRAFKRELKTKEPVIM  403
                H+  ++++ T    ++
Sbjct  9760968  HKVLQKDVSTHREAML  9760921


 Features in this part of subject sequence:
   short stop, isoform H
   short stop, isoform C

 Score = 48.9 bits (115),  Expect = 0.018, Method: Compositional matrix adjust.
 Identities = 101/495 (20%), Positives = 201/495 (40%), Gaps = 54/495 (10%)
 Frame = -3

Query  5        LMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRR  64
                L + +    +F+       +WL+  ++++ +   +   LE I   + + K   +D+   R
Sbjct  9761112  LEIALKEATEFHDTLQAFVEWLTQAEKLLSNAEPVSRVLETIQAQMEEHKVLQKDVSTHR  9760933

Query  65       PQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQ  124
                  +  L     +LK  +  Q+   +I + +  +Q++W+ V      R + L+   K++ +
Sbjct  9760932  EAMLLLDKKGTHLKYFSQKQDV-ILIKNLLVSVQHRWERVVSKAAERTRALDHGYKEARE  9760756

Query  125      W-------LEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNV  177
                +       ++  +E EQVL Q   +  + KE       I+K I + K+  + L   Q+  
Sbjct  9760755  FNDAWSGMMQYLQETEQVLDQIIEEATASKEPQ----KIKKYIGKLKETHRQLGAKQSVY  9760588

Query  178      DVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLD  237
                D        LL      D   +  +   +   W  +  +  +R+  LEE   L  QF   
Sbjct  9760587  DGTMRTGKNLLERAPKGDRPVLDKMLIELKEQWTRVWSKSIDRQRKLEEALLLSGQFSDA  9760408

Query  238      LEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDE  297
                L + L WL +A            K RL E+     +L    + +QG  E H  +  +L +
Sbjct  9760407  LGELLDWLKKA------------KSRLNENGPVHGDL----ETVQGLCEHHKHIEQDLQK  9760276

Query  298      NS---QKIL---RSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                 +   Q +L   R LE S +   + R+LD M   W E++         L+ +    ++L+
Sbjct  9760275  RAAQMQGVLKTGRDLERSGNNPEVGRQLDEMQSIWEEVKSAVAKRGERLQVALVDAEKLN  9760096

Query  352      LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
                  +Q L  WL   + +L        D    ++  D+H  F ++L+ +E     T E    
Sbjct  9760095  ARVQALFDWLDHAEHKLRYAKNAPDDEKVSREMMDIHMDFMKDLRVREREKTETFEYAED  9759916

Query  412      FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
                 +         K Y  P  +P          +++     +   WE++   + + + K+++
Sbjct  9759915  IIN--------KAY--PDAIP----------IIKNWLSIIQQRWEEVRQWAINRESKLEQ  9759796

Query  472      TLERLQELQEATDEL  486
                 L+ L++L +  +EL
Sbjct  9759795  HLQSLKDLDDTIEEL  9759751


 Features in this part of subject sequence:
   short stop, isoform H
   short stop, isoform C

 Score = 47.0 bits (110),  Expect = 0.072, Method: Compositional matrix adjust.
 Identities = 67/363 (18%), Positives = 154/363 (42%), Gaps = 25/363 (6%)
 Frame = -1

Query  26       LSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEE----------------  69
                L  L +    Q   + D++D+++   + K    +L+Q R Q E+                
Sbjct  9765485  LKALREFYDHQSQTLDDIQDVSDEFKRMKPVGSELDQIRRQQEDFRNFRERKVEPLAINV  9765306

Query  70       --LITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLE  127
                  +  A ++L     +  + T I   +E++ ++W++++E +  R ++L+  L  S ++ E
Sbjct  9765305  DKVNVAGRDLVRSAGSGVSTTAIEKDLEKLNDRWNDLKERMNERDRRLDVALLQSGKFQE  9765126

Query  128      AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
                A     + L      + + K        ++ ++ E K L K L   Q ++    +L  ++
Sbjct  9765125  ALAGLSKWLSDTEEMVANQKPPSSDYKVVKAQLQEQKFLKKMLLDRQNSMGSLANLGKEV  9764946

Query  188      LRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTE  247
                       +   +     ++   + ++     +RE  LEE   + ++F   +     WL  
Sbjct  9764945  ANHCEPGERASIEKQLNDLMKRFDALTDGAEQRELDLEEAMEVAKRFHDKISPLELWLDN  9764766

Query  248      AETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLE  307
                 E +   +      E +  D + +++ +++   L  EI      + +L + + +++  L 
Sbjct  9764765  TERSVKAM------ELIPTDEEKIQQRIREHDRLHDEILGKKPDFSDLADVTAQLMH-LV  9764607

Query  308      GSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDE  367
                  ++AV L  ++  +  +++ L   S NI + L  S    + L LS Q+L+ W++  + E
Sbjct  9764606  SDEEAVNLGEKVRGVTERYTGLVDASDNIGALLAESRQGLRHLVLSYQDLVAWMESMEAE  9764427

Query  368      LSR  370
                L R
Sbjct  9764426  LKR  9764418


 Features in this part of subject sequence:
   short stop, isoform H
   short stop, isoform C

 Score = 42.4 bits (98),  Expect = 1.5, Method: Compositional matrix adjust.
 Identities = 77/364 (21%), Positives = 157/364 (43%), Gaps = 40/364 (10%)
 Frame = -3

Query  14       DFNRAWTELTDWLS----LLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEE  69
                +FN AW+ +  +L     +LDQ+I+ +     + + I + I K K T + L  ++   + 
Sbjct  9760758  EFNDAWSGMMQYLQETEQVLDQIIE-EATASKEPQKIKKYIGKLKETHRQLGAKQSVYDG  9760582

Query  70       LITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAK  129
                 +   +NL  +    + R ++   +  ++ QW  V     +R+++L E L  S Q+ +A 
Sbjct  9760581  TMRTGKNLLERAPKGD-RPVLDKMLIELKEQWTRVWSKSIDRQRKLEEALLLSGQFSDAL  9760405

Query  130      EEAEQVLGQARAKLESWKEGPYTVD--AIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
                 E    L +A+++L   + GP   D   +Q      K + +DL++    +       LK 
Sbjct  9760404  GELLDWLKKAKSRLN--ENGPVHGDLETVQGLCEHHKHIEQDLQKRAAQMQGV----LKT  9760243

Query  188      LRDYS-ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
                 RD   + +  +V    + + + W  +   V++R   L+      ++    ++    WL 
Sbjct  9760242  GRDLERSGNNPEVGRQLDEMQSIWEEVKSAVAKRGERLQVALVDAEKLNARVQALFDWLD  9760063

Query  247      EAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSL  306
                 AE      ++A       +D K  +E+M          + H D   +L    ++   + 
Sbjct  9760062  HAEHKLRYAKNAP------DDEKVSREMM----------DIHMDFMKDLRVREREKTETF  9759931

Query  307      EGSDDAV---------LLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQEL  357
                E ++D +         +++  L  +  +W E+R+ ++N  S LE      K L  +++EL
Sbjct  9759930  EYAEDIINKAYPDAIPIIKNWLSIIQQRWEEVRQWAINRESKLEQHLQSLKDLDDTIEEL  9759751

Query  358      LVWL  361
                L WL
Sbjct  9759750  LAWL  9759739


 Features in this part of subject sequence:
   short stop, isoform H
   short stop, isoform C

 Score = 42.4 bits (98),  Expect = 1.9, Method: Compositional matrix adjust.
 Identities = 52/250 (20%), Positives = 116/250 (46%), Gaps = 19/250 (7%)
 Frame = -3

Query  281      LQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHL  340
                L  +I+AH +    L++  ++++ + +GS +A   Q +L  +N +W +L +K+ + +  L
Sbjct  9761622  LANDIQAHQNSVDTLNDAGRQLIETEKGSVEASTTQEKLRKLNNEWKQLLQKASDRQHEL  9761443

Query  341      EASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEP  400
                E +  +       +Q++L WL   D  +    P+GG      +Q +       EL    P
Sbjct  9761442  EEALREAHGYIAEVQDILGWLGDVDAVIGASKPVGGLPETATEQLERFMEVYNELDENRP  9761263

Query  401      VIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNL  460
                 +    ET++        +G E + ++ +        Q+  R L+++       W+ +  
Sbjct  9761262  KV----ETIQA-------QGQEYIKRQNQMKVSSSNLQHTLRTLKQR-------WDAVVS  9761137

Query  461      HSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKA  520
                 ++D + K++  L+   E  +        L QAE +  + +PV  +L +++Q  +E+ K 
Sbjct  9761136  RASDKKIKLEIALKEATEFHDTLQAFVEWLTQAEKLLSNAEPVSRVL-ETIQAQMEEHKV  9760960

Query  521      LRGEIAPLKE  530
                L+ +++  +E
Sbjct  9760959  LQKDVSTHRE  9760930


>gb|AC007356.8|AC007356 Drosophila melanogaster, chromosome 2R, region 49A-49B, BAC clone 
BACR24H09, complete sequence
Length=189557

 Score = 81.6 bits (200),  Expect(2) = 1e-18, Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
 Frame = +1

Query  731    TGRIRVLSFKTGIISLCKAHLEDKYRY---------------------LFKQVASSTGFC  769
              +G+IRV S K  + ++C   L DK R                      +F Q++   G  
Sbjct  21589  SGKIRVFSIKVALATMCSGKLVDKLRCE*CTHHLITK*TRLKLFHRTDIFSQISDGAGQL  21768

Query  770    DQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEP  829
                 +LG  L + + +P  + E  +F   + +  +      A NK  +   +        P
Sbjct  21769  VAWKLGEFLREVLALPAAVYESPTF---HYKEGLEEEIFPAENKVTVNDFMATLMSEPGP  21939

Query  830    QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKG  889
                +VWLP++HR+A  ET  H   C++C +    GFRYR  +   Y +CQ CF+ G+ +  
Sbjct  21940  SCLVWLPLVHRLATVETIVHPTVCSVCHKENFTGFRYRCQRCHAYQLCQECFWHGKTSLN  22119

Query  890    HKMHYPMVEY  899
              H+  + + EY
Sbjct  22120  HQNDHEVKEY  22149


 Score = 41.2 bits (95),  Expect(2) = 1e-18, Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
 Frame = +2

Query  635    LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIIN  692
              L   +++RF++YRTA KLR +QK+  L L+ +    +A  ++ L   +    + + ++  
Sbjct  21227  LQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSEVSVARLET  21406

Query  693    CLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVY  726
               ++++Y  L +       VP+     + LNWLL  Y
Sbjct  21407  LVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAY  21514


>gb|AC007476.5|AC007476 Drosophila melanogaster, chromosome 2R, region 49A-49B, BAC clone 
BACR37P06, complete sequence
Length=171705

 Score = 81.6 bits (200),  Expect(2) = 1e-18, Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
 Frame = +1

Query  731     TGRIRVLSFKTGIISLCKAHLEDKYRY---------------------LFKQVASSTGFC  769
               +G+IRV S K  + ++C   L DK R                      +F Q++   G  
Sbjct  136474  SGKIRVFSIKVALATMCSGKLVDKLRCE*CTHHLITK*TRLKLFHRTDIFSQISDGAGQL  136653

Query  770     DQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEP  829
                  +LG  L + + +P  + E  +F   + +  +      A NK  +   +        P
Sbjct  136654  VAWKLGEFLREVLALPAAVYESPTF---HYKEGLEEEIFPAENKVTVNDFMATLMSEPGP  136824

Query  830     QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKG  889
                 +VWLP++HR+A  ET  H   C++C +    GFRYR  +   Y +CQ CF+ G+ +  
Sbjct  136825  SCLVWLPLVHRLATVETIVHPTVCSVCHKENFTGFRYRCQRCHAYQLCQECFWHGKTSLN  137004

Query  890     HKMHYPMVEY  899
               H+  + + EY
Sbjct  137005  HQNDHEVKEY  137034


 Score = 41.2 bits (95),  Expect(2) = 1e-18, Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
 Frame = +2

Query  635     LADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK--QNDQPMDILQIIN  692
               L   +++RF++YRTA KLR +QK+  L L+ +    +A  ++ L   +    + + ++  
Sbjct  136112  LQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSEVSVARLET  136291

Query  693     CLTTIYDRLEQEHNNLVNVPL--CVDMCLNWLLNVY  726
                ++++Y  L +       VP+     + LNWLL  Y
Sbjct  136292  LVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAY  136399


>emb|Z11860.1| H.sapiens gene encoding dystrophin, exon 60
Length=989

 Score =  101 bits (252),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 49/52 (94%), Positives = 51/52 (98%), Gaps = 0/52 (0%)
 Frame = +1

Query  519  KALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVA  570
            +ALRGEIAPLKENVSHV DLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQV+
Sbjct  643  QALRGEIAPLKENVSHVKDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQVS  798


>ref|XM_001946815.1| PREDICTED: Acyrthosiphon pisum similar to dystrophin CG34157-PC 
(LOC100166731), mRNA
Length=3726

 Score =  101 bits (251),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 125/234 (53%), Gaps = 10/234 (4%)
 Frame = +1

Query  29    LDQVIKSQRVMVGDLEDINEMIIKQKAT------MQDLEQRRPQLEELITAAQNLKNKTS  82
             L +++K+ R     L++INE I+K+ +       +++LEQ++PQL+EL+  A+NLK  ++
Sbjct  2962  LQEIVKNLRDNWNYLKNINENILKKPSVTSIENVLRELEQKKPQLDELVHTAENLKADSN  3141

Query  83    NQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAK  142
              Q+    +  ++ +++  WDE    +  R+ +LN ML DS ++   K E +  L +   +
Sbjct  3142  RQQ----LHGKVTKLREHWDETNNKVMQRKTELNAMLSDSQRYETKKMEIDTWLTRMENR  3309

Query  143   LESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMI  202
             L+       T D +  +  E K    +L Q++ ++D+ N L  KL+  Y  DDT K+  +
Sbjct  3310  LQRMSSVGNTADVLDAQQREQKSFHVELHQYKHHIDLFNQLTQKLIAVYQNDDTSKIKKL  3489

Query  203   TENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQ  256
             TE ++  +++++  +  R   L      LQ      + FL WL+EAE++   ++
Sbjct  3490  TEQVHQRFQNLNTNIISRGKVLHSAINSLQNLDKSFDNFLGWLSEAESSMETIE  3651


>gb|AF213442.1|AF213442 Homo sapiens dystrophin (DMD) gene, exon 70 and partial cds
Length=952

 Score =  101 bits (251),  Expect = 3e-18, Method: Composition-based stats.
 Identities = 48/61 (78%), Positives = 53/61 (86%), Gaps = 5/61 (8%)
 Frame = +1

Query  893  HYPMVEYCTP-----TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME  947
            ++P++   +P     TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME
Sbjct  235  NHPVLNLISP*SPF*TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME  414

Query  948  T  948
            T
Sbjct  415  T  417


>gb|M86894.1|HUMDYST11 H.sapiens dystrophin gene, exon 70
Length=284

 Score =  101 bits (251),  Expect = 3e-18, Method: Composition-based stats.
 Identities = 48/61 (78%), Positives = 53/61 (86%), Gaps = 5/61 (8%)
 Frame = +3

Query  893  HYPMVEYCTP-----TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME  947
            ++P++   +P     TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME
Sbjct  18   NHPVLNLISP*SPF*TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNME  197

Query  948  T  948
            T
Sbjct  198  T  200


>ref|XM_001195605.1| PREDICTED: Strongylocentrotus purpuratus similar to dystonin 
(LOC756550), mRNA
Length=9330

 Score = 98.6 bits (244),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 114/582 (19%), Positives = 251/582 (43%), Gaps = 39/582 (6%)
 Frame = +1

Query  11    ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
             AL     +  EL +W++  ++ +  QR ++GD +     + K K    D+      ++ +
Sbjct  5629  ALGQLESSLDELLNWMNRTEKALSDQRPVMGDTKGAEIELAKHKVLQNDIMAHESSVKSV  5808

Query  71    ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKE  130
               A QN      N++   ++  +++ + N+W  +      R+++L   L ++  + E   
Sbjct  5809  NQAGQNFVASADNRQVANVVRSKLDDVNNKWANLTRMSDGRQRELEGALGETKNFAEEAT  5988

Query  131   EAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRD  190
                + L     +L S +      +  ++++     L K + + +   D       +L R 
Sbjct  5989  RLLRWLHDINGQLSSSQPVGGLPETAREQLDRHNDLRKHMDREKLAFDSLMQAGQQLKRQ  6168

Query  191   YS--ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEA  248
                 AD    V    + + A W + +++ ++R+  LE+     Q F   L+ F++WLT A
Sbjct  6169  SGPEADREGGVGHTLKTLQAQWDAANQKATDRKRKLEDALTQAQNFHDALQAFISWLTTA  6348

Query  249   ETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEG  308
             E T N    +++    + D+  + + + + +D   +I+AH +   +LD    + L+    
Sbjct  6349  EKTMN----SSKPPSTVLDT--INQQITEHKDFLMDIQAHKETMRDLDRAGTQ-LKYFSQ  6507

Query  309   SDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDEL  368
               D +L++  L ++  +W +++ +  +    L++   + K+      +L  WL     +L
Sbjct  6508  KQDVILIKNLLISVQNRWEKVQSRCNDRTRQLDSGFKRAKQFDEQYGKLFGWLTDSQAQL  6687

Query  369   SRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEP  428
              +   IG D   ++ Q   H+ F+R L  K+P+  + + + R                  
Sbjct  6688  DQDKSIGSDPETLKAQLRRHKDFQRALGAKQPLYDNIVRSGRSL--------------RD  6825

Query  429   RELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDL  488
             +  P +      T+ +     ++  EW+ +   S D QRK++E L    + ++A   L  
Sbjct  6826  KSNPAD------TKTINGMLTDLKDEWDLVCGRSVDRQRKLEEALLHSGQFKDALQALLE  6987

Query  489   KLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGI  547
              L Q E       PV GD  ID++ + +E  K  + ++   K +V  VN  A+ L     
Sbjct  6988  WLYQVEPTLSDETPVDGD--IDTVMNLMEAHKGFQRDLGSRKNSVKSVNKSAKDLMDKSS  7161

Query  548   QLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHEAH  582
             + + +  + +++L ++W+ +       Q  +ED +++  + H
Sbjct  7162  EDTSHLRAKIQELASKWETVCEQSVHKQERLEDAMKEAEDFH  7287


 Score = 90.5 bits (223),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 115/554 (20%), Positives = 237/554 (42%), Gaps = 51/554 (9%)
 Frame = +1

Query  40    VGDLEDINEMIIKQ-KATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQ  98
             + D +DI + I +   A  QD+E  +   ++L+T   +  NK   Q+        ++ + 
Sbjct  5080  IKDQQDILQAIKEDIDAVKQDVEMTKQLGQDLMTHCSD-SNKPEVQK-------NVDELN  5235

Query  99    NQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQK  158
             N WD + +  ++R Q+L++  + +  + +  +     + +A  +++           +++
Sbjct  5236  NSWDNLNDAFKDRHQKLDDADEAAQAFQDGLDRMNDYMTKAEEQVDRMPAVGSDPQTVRR  5415

Query  159   KITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVS  218
             ++       K+L +    ++  N L  +LL   + ++   V     ++N  W+++  +  
Sbjct  5416  QLDNLNAFKKELGRNNLELETVNQLGNRLLTKCTPENQELVQAPMSDMNRRWKNLQDKTF  5595

Query  219   EREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQW  278
             +R+  LE     L Q    L++ L W+   E     L D   +  ++ D+KG +  + + 
Sbjct  5596  DRQHKLEAGFLALGQLESSLDELLNWMNRTE---KALSD---QRPVMGDTKGAEIELAKH  5757

Query  279   QDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRS  338
             + LQ +I AH     ++++  Q  + S +    A +++ +LD++N KW+ L + S   + 
Sbjct  5758  KVLQNDIMAHESSVKSVNQAGQNFVASADNRQVANVVRSKLDDVNNKWANLTRMSDGRQR  5937

Query  339   HLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTK  398
              LE +  + K        LL WL   + +LS   P+GG     ++Q D H   ++ +  +
Sbjct  5938  ELEGALGETKNFAEEATRLLRWLHDINGQLSSSQPVGGLPETAREQLDRHNDLRKHM-DR  6114

Query  399   EPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPE-ERAQNVTRLLRKQAEEVNTEWEK  457
             E +   +L              ++   Q  R+  PE +R   V   L+     +  +W+ 
Sbjct  6115  EKLAFDSL--------------MQAGQQLKRQSGPEADREGGVGHTLKT----LQAQWDA  6240

Query  458   LNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEK  517
              N  + D +RK+++ L + Q   +A       L  AE    S +P   +L D++   + +
Sbjct  6241  ANQKATDRKRKLEDALTQAQNFHDALQAFISWLTTAEKTMNSSKPPSTVL-DTINQQITE  6417

Query  518   VKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYN--------LSTLEDLNTRWKLLQV  569
              K    +I   KE +       R L   G QL  ++         + L  +  RW+ +Q 
Sbjct  6418  HKDFLMDIQAHKETM-------RDLDRAGTQLKYFSQKQDVILIKNLLISVQNRWEKVQS  6576

Query  570   AVEDRVRQLHEAHR  583
                DR RQL    +
Sbjct  6577  RCNDRTRQLDSGFK  6618


 Score = 77.8 bits (190),  Expect = 4e-11, Method: Compositional matrix adjust.
 Identities = 101/478 (21%), Positives = 213/478 (44%), Gaps = 39/478 (8%)
 Frame = +1

Query  14    DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITA  73
             +F+ A      WL+  ++ + S +     L+ IN+ I + K  + D++  +  + +L  A
Sbjct  6301  NFHDALQAFISWLTTAEKTMNSSKPPSTVLDTINQQITEHKDFLMDIQAHKETMRDLDRA  6480

Query  74    AQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAE  133
                LK  +  Q+   +I + +  +QN+W++VQ    +R +QL+   K + Q+ E   +  
Sbjct  6481  GTQLKYFSQKQDV-ILIKNLLISVQNRWEKVQSRCNDRTRQLDSGFKRAKQFDEQYGKLF  6657

Query  134   QVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSA  193
               L  ++A+L+  K      + ++ ++   K   + L   Q   D        L    + 
Sbjct  6658  GWLTDSQAQLDQDKSIGSDPETLKAQLRRHKDFQRALGAKQPLYDNIVRSGRSLRDKSNP  6837

Query  194   DDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTAN  253
              DT+ ++ +  ++   W  +  R  +R+  LEE      QF   L+  L WL + E T  
Sbjct  6838  ADTKTINGMLTDLKDEWDLVCGRSVDRQRKLEEALLHSGQFKDALQALLEWLYQVEPT--  7011

Query  254   VLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAV  313
              L D T  +    D   V  LM+  +  Q ++ +  +   +++++++ ++   + S+D  
Sbjct  7012  -LSDETPVD---GDIDTVMNLMEAHKGFQRDLGSRKNSVKSVNKSAKDLMD--KSSEDTS  7173

Query  314   LLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAP  373
              L+ ++  +  KW  + ++S++ +  LE +  + +  H  +Q LL WL   +  L  Q P
Sbjct  7174  HLRAKIQELASKWETVCEQSVHKQERLEDAMKEAEDFHDIVQLLLEWLADAEQSLRFQGP  7353

Query  374   IGGDFPAVQKQNDVHRAFK-----RELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEP  428
             +  D   +++Q + H+ FK     +E++  +  +M   +T+           L K +  P
Sbjct  7354  LSNDPEVIREQMETHKDFKDSFGSQEMRMNDACVMG--DTI-----------LSKCH--P  7488

Query  429   RELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDEL  486
               +P          +++     +   WE++   S     ++DETL+ L E  E  ++L
Sbjct  7489  EAVP----------VIKHWITVLQARWEEVMALSDQKSDRLDETLDNLAENAELLEKL  7632


 Score = 53.1 bits (126),  Expect = 9e-04, Method: Compositional matrix adjust.
 Identities = 113/581 (19%), Positives = 233/581 (40%), Gaps = 41/581 (7%)
 Frame = +1

Query  9     VPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLE  68
             +P    FN +  ELT WL  ++  +K+ +    D E+I   +   +   Q + +++  + 
Sbjct  4309  LPQTLQFNESHEELTKWLDEVEGDLKNLKPPGLDAEEIRREVDNNRFMKQTVAEKQQHVN  4488

Query  69    ELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEA  128
             +L   A  L   +    A+ +   + +    +++ V+E +  R +++ ++L+ ++ ++E 
Sbjct  4489  KLNRIAPELAKLSPGAGAQGVQA-KADDDNRRYENVKEDVNKRGEKMFDLLQRTSSFVED  4665

Query  129   KEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLL  188
              +   + L     KL   +      D ++K++ + + L  ++      VDV      +++
Sbjct  4666  LDSTLEQLNITAEKLSRPEPISADPDHLRKQMKKLQALRDNIDSQMDVVDVMRKAGNEMI  4845

Query  189   RDYSADD--TRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
                S  D   R +    + ++  W  I    ++R A L+E     + F         W  
Sbjct  4846  EASSPSDPHVRDLKDKLDQMSNKWDDITATANKRSADLQEALHSAESF---------W-E  4995

Query  247   EAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSL  306
             E   T+  ++D   + +  E        +K  QD+   I+   D      E ++++ + L
Sbjct  4996  EMNGTSGTIKDLQDQIKSQEPPAVEIPAIKDQQDILQAIKEDIDAVKQDVEMTKQLGQDL  5175

Query  307   E---GSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQL  363
                    +   +Q+ +D +N  W  L     +    L+ + +  +     L  +  ++  
Sbjct  5176  MTHCSDSNKPEVQKNVDELNNSWDNLNDAFKDRHQKLDDADEAAQAFQDGLDRMNDYMTK  5355

Query  364   KDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEK  423
              ++++ R   +G D   V++Q D   AFK+EL      + +  +     LT+   E  E 
Sbjct  5356  AEEQVDRMPAVGSDPQTVRRQLDNLNAFKKELGRNNLELETVNQLGNRLLTKCTPENQE-  5532

Query  424   LYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEAT  483
             L Q P                     ++N  W+ L   + D Q K++     L +L+ + 
Sbjct  5533  LVQAP-------------------MSDMNRRWKNLQDKTFDRQHKLEAGFLALGQLESSL  5655

Query  484   DELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQL  542
             DEL   + + E      +PV GD      +  L K K L+ +I   + +V  VN   +  
Sbjct  5656  DELLNWMNRTEKALSDQRPVMGD--TKGAEIELAKHKVLQNDIMAHESSVKSVNQAGQNF  5829

Query  543   TTLGIQLSPYNL--STLEDLNTRWKLLQVAVEDRVRQLHEA  581
                       N+  S L+D+N +W  L    + R R+L  A
Sbjct  5830  VASADNRQVANVVRSKLDDVNNKWANLTRMSDGRQRELEGA  5952


 Score = 52.4 bits (124),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 73/397 (18%), Positives = 182/397 (45%), Gaps = 24/397 (6%)
 Frame = +1

Query  9     VPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQR----R  64
             + +L+DF  A   L  WL   +++      ++G +     ++  QK  ++ L++      
Sbjct  379   INSLSDFETAHNRLKTWLGEKERMAS----VLGPIGVEPGILRNQKLQVEVLQEEFAAHE  546

Query  65    PQLEELITAAQNLKNKTSNQEARTIITDRIER----IQNQWDEVQEHLQNRRQQLNEMLK  120
             PQ+E+L+ A Q + +K   Q+ R+  T  I++    ++NQWD ++  L +R  +++++L+
Sbjct  547   PQMEQLLEAGQAIVDK---QDPRSRTTSPIQQQVADLKNQWDALKGQLDDREGKIDDVLR  717

Query  121   DSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA  180
              S  + +  +++   L   R K+ +      + + +++++ ETK L ++  + +   D  
Sbjct  718   KSEHFHDILQDSSDWLIDFRNKISNLAPISNSPEVVRQQMEETKNLQREADRRKPQQDKL  897

Query  181   NDLALKLLRDYSADDTRK--VHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDL  238
             ++   +L  + + + T K  V +  E++   +  +  ++ ER+  L+      + F    
Sbjct  898   SETHRELT-ELNPELTAKAEVTLKLESVRTPYNDLCHKLDERQGKLQAALLQSRDFEESY  1074

Query  239   EKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDEN  298
                L WL   +   N ++  + K  +L      +  + + +++  EI      Y  + E 
Sbjct  1075  GSMLRWLDTKDKELNQVKPISAKPEVL------RRQVVEHEEIPKEIVKQVYTYERMLEK  1236

Query  299   SQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELL  358
                +    +   +   LQ + D++  KW+ +  ++      L+ ++++ K     L + L
Sbjct  1237  IDSLKDEADSPAEKNELQGKRDSLQTKWNSVNDRATQRGERLKEANEKAKVYSDELNQFL  1416

Query  359   VWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKREL  395
              WL+  +D +S   P+      V++Q ++ +  + ++
Sbjct  1417  PWLRSAEDRMSSLGPVTAKPNVVRRQYELIKQLQEDI  1527


 Score = 49.3 bits (116),  Expect = 0.015, Method: Compositional matrix adjust.
 Identities = 67/296 (22%), Positives = 126/296 (42%), Gaps = 33/296 (11%)
 Frame = +1

Query  311   DAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSR  370
             D+   + +LDN+N +W  LR+++   +  +E ++ + + L  ++ E+   L   +     
Sbjct  2245  DSDSFREQLDNLNKRWQRLRERANKRQDDVERTTSRMQDLKHTMGEVDELLGKAESAQML  2424

Query  371   QAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQ--EP  428
             Q P+G D   V++Q    + + R     EP++    +  R+          + L Q  EP
Sbjct  2425  QKPVGADVDTVKQQQKEFKTYMRNF--VEPLVPRLRDANRVG---------QSLVQSAEP  2571

Query  429   RELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDL  488
             R           T  L    E +N  W +L+  ++D + K++E L R  + QEA   L  
Sbjct  2572  RV---------NTNQLEGDMEAMNDRWNRLHAKNSDREAKLNEGLLRCGKFQEALQSLMG  2724

Query  489   KLRQAE-VIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGI  547
              + + E ++     P  D  +  ++  L + + L   I   + +V  + ++  QL+ +  
Sbjct  2725  WIGETEDLVSTQKDPSSDYKV--VKAQLAEQQLLDRLITDREPSVDALKEMGEQLSKVSE  2898

Query  548   QLSPYNL-STLEDLNTRWKLLQVAVEDRVRQLHEA-------HRDFGPASQHFLST  595
                   +   L DL  RW+ L  AV DR ++L +        H    P SQ   +T
Sbjct  2899  PQDRMRIQQQLSDLERRWRALVDAVRDRRQKLEQTEKTAKDFHEQIAPLSQWLDAT  3066


 Score = 42.7 bits (99),  Expect = 1.3, Method: Compositional matrix adjust.
 Identities = 55/270 (20%), Positives = 125/270 (46%), Gaps = 10/270 (3%)
 Frame = +1

Query  15    FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
             F  A   L +WL  ++  +  +  + GD++ +  ++   K   +DL  R+  ++ +  +A
Sbjct  6958  FKDALQALLEWLYQVEPTLSDETPVDGDIDTVMNLMEAHKGFQRDLGSRKNSVKSVNKSA  7137

Query  75    QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
             ++L +K+S  E  + +  +I+ + ++W+ V E   +++++L + +K++  + +  +   +
Sbjct  7138  KDLMDKSS--EDTSHLRAKIQELASKWETVCEQSVHKQERLEDAMKEAEDFHDIVQLLLE  7311

Query  135   VLGQARAKLESWKEGPYTVD--AIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS  192
              L  A   L    +GP + D   I++++   K         +  ++ A  +   +L    
Sbjct  7312  WLADAEQSLRF--QGPLSNDPEVIREQMETHKDFKDSFGSQEMRMNDACVMGDTILSKCH  7485

Query  193   ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA  252
              +    +      + A W  +     ++   L+ET   L +    LEK + WL ++E   
Sbjct  7486  PEAVPVIKHWITVLQARWEEVMALSDQKSDRLDETLDNLAENAELLEKLMDWLNKSE---  7656

Query  253   NVLQDATRKERLLEDSKGVKELMKQWQDLQ  282
             +VLQD   K    ED   ++ L+K+ QD +
Sbjct  7657  HVLQDRDSKP-TPEDVDRIQALLKEHQDFE  7743


 Score = 41.6 bits (96),  Expect = 3.1, Method: Compositional matrix adjust.
 Identities = 73/391 (18%), Positives = 162/391 (41%), Gaps = 25/391 (6%)
 Frame = +1

Query  94    IERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTV  153
             +E + ++W+ +     +R  +LNE L    ++ EA +     +G+    + + K+     
Sbjct  2602  MEAMNDRWNRLHAKNSDREAKLNEGLLRCGKFQEALQSLMGWIGETEDLVSTQKDPSSDY  2781

Query  154   DAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSI  213
               ++ ++ E + L + +   + +VD   ++  +L +     D  ++     ++   WR++
Sbjct  2782  KVVKAQLAEQQLLDRLITDREPSVDALKEMGEQLSKVSEPQDRMRIQQQLSDLERRWRAL  2961

Query  214   HKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKE  273
                V +R   LE+T +  + F   +     WL   E +         +  +  D   +++
Sbjct  2962  VDAVRDRRQKLEQTEKTAKDFHEQIAPLSQWLDATERS------LASQPPVSTDKAQIQK  3123

Query  274   LMKQWQDLQGEIEAHT-DVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKK  332
              ++  Q ++ +++ H  DV   +  ++ + L+ +    +   LQ RLD +  ++  +R K
Sbjct  3124  QIQDQQAMERDVQNHGPDVRETM--SAGRKLQRMVSPSERDSLQTRLDAVQDRYDNIRDK  3297

Query  333   SLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFK  392
             +L  +  L  +    +        LL WL   + +L R  PI      VQKQ D      
Sbjct  3298  TLQKKVDLNRALATSQVFGEDEAALLRWLTDMERKLGRPQPISIHPEVVQKQLDNQTVLH  3477

Query  393   RELKTKEPVIMSTLETVRIFL----------TEQPLEGLEKLYQEPRELPPEERAQNVTR  442
               +  ++P I   L   +  L           +Q L+ ++  Y    +   ++ +Q    
Sbjct  3478  ASVLDRQPEIRKVLSDGQDLLRQCTGKEVSDVQQKLDHIQNRYDNIFQKSEDQLSQ----  3645

Query  443   LLRKQAEEVNTEWEKLNLHSADWQRKIDETL  473
                +QA  +  E+ +L    ADW +K ++ L
Sbjct  3646  --LQQAVPLANEFNRLQSEFADWLKKAEQDL  3732


 Score = 41.2 bits (95),  Expect = 3.4, Method: Compositional matrix adjust.
 Identities = 125/607 (20%), Positives = 255/607 (42%), Gaps = 83/607 (13%)
 Frame = +1

Query  3     SSLMLEVPALADFNRAWTELTDWLSLLDQ---------VIKSQRVMVGDLEDINEMIIKQ  53
             S L   VP   +FNR  +E  DWL   +Q          +++Q+ +   L+D    I + 
Sbjct  3640  SQLQQAVPLANEFNRLQSEFADWLKKAEQDLRNFDPSASVETQKAVQEKLQD---EIDRH  3810

Query  54    KATMQDLEQRRPQLEELI--TAAQNLKNKTSNQEAR-TIITDRIERIQNQWDEVQEHLQN  110
             +  +Q+L ++  +L EL     A  ++ + ++   R   +  R + I+ +     +  Q 
Sbjct  3811  RPILQELNEKGTRLIELSPGQGAAEIRQQLNDDNQRFNELASRTKDIEYRLSAALDGAQK  3990

Query  111   RRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDL  170
              +Q ++ +LK    WL+  +  +Q   QAR  +          D ++ ++ + K + K++
Sbjct  3991  VQQSMDGLLK----WLDEADRQQQT--QARETIS------VEPDGVRDQLKKAKAIDKEI  4134

Query  171   RQWQTNVDVANDLALKLLRDYSADDTR---KVHMITENINASWRSIHKRVSEREAALEET  227
                Q+ V      A  L+   S  D R   ++     ++   +  +  R ++R   LEE 
Sbjct  4135  TGKQSRVQDTLGAAEALIEQTS--DPRQQARLESQANDLKQRFDDLSARSADRVEVLEEA  4308

Query  228   HRLLQQFPLDLEKFLAWLTEAETTANVLQ----DATRKERLLEDSKGVKELMKQWQDLQG  283
                  QF    E+   WL E E     L+    DA    R +++++ +K+ +        
Sbjct  4309  LPQTLQFNESHEELTKWLDEVEGDLKNLKPPGLDAEEIRREVDNNRFMKQTV-------A  4467

Query  284   EIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEAS  343
             E + H +  + +       L  L     A  +Q + D+ N ++  + K+ +N R   E  
Sbjct  4468  EKQQHVNKLNRIAPE----LAKLSPGAGAQGVQAKADDDNRRYENV-KEDVNKRG--EKM  4626

Query  344   SDQWKRLHLSLQEL---LVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEP  400
              D  +R    +++L   L  L +  ++LSR  PI  D   ++KQ    +A +  + ++  
Sbjct  4627  FDLLQRTSSFVEDLDSTLEQLNITAEKLSRPEPISADPDHLRKQMKKLQALRDNIDSQ--  4800

Query  401   VIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKL--  458
               M  ++ +R    E        + +      P        R L+ + ++++ +W+ +  
Sbjct  4801  --MDVVDVMRKAGNE--------MIEASSPSDPH------VRDLKDKLDQMSNKWDDITA  4932

Query  459   --NLHSADWQRKIDETLERLQELQEATDEL-DLKLRQAEVIKGSWQPVGDLLIDSLQDHL  515
               N  SAD Q  +       +E+   +  + DL+    + IK    P   + I +++D  
Sbjct  4933  TANKRSADLQEALHSAESFWEEMNGTSGTIKDLQ----DQIKSQEPPA--VEIPAIKDQQ  5094

Query  516   EKVKALRGEIAPLKENVSHVNDLARQLTT-LGIQLSPYNLSTLEDLNTRWKLLQVAVEDR  574
             + ++A++ +I  +K++V     L + L T       P     +++LN  W  L  A +DR
Sbjct  5095  DILQAIKEDIDAVKQDVEMTKQLGQDLMTHCSDSNKPEVQKNVDELNNSWDNLNDAFKDR  5274

Query  575   VRQLHEA  581
              ++L +A
Sbjct  5275  HQKLDDA  5295


>emb|CT027835.13| Zebrafish DNA sequence from clone CH211-66E18 in linkage group 
14, complete sequence
Length=83584

 Score = 97.8 bits (242),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 58/138 (42%), Positives = 71/138 (51%), Gaps = 25/138 (18%)
 Frame = -1

Query  750    HLEDKYRYLFK------------QVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFG--  795
              H+ D Y  LF              V  S+ FCD  R  L +    ++    G  + FG  
Sbjct  80986  HVPDFYLILFY*GYSLSSVFHRVVVTRSSFFCDCFRDSLWVE---KVHSTNGYASCFGA*  80816

Query  796    --------GSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETA  847
                      G+N       CF   + K  IE + FL+WM LEPQS+VWLPVLHRV  AETA
Sbjct  80815  LGMHNEQYGANCCCLSLVCFLQVSGKSAIELSHFLEWMSLEPQSVVWLPVLHRVTVAETA  80636

Query  848    KHQAKCNICKECPIIGFR  865
              KHQA+C ICK+CPI GFR
Sbjct  80635  KHQARCYICKQCPIKGFR  80582


 Score = 77.8 bits (190),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 45/73 (61%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
 Frame = -3

Query  1044   NRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARM  1103
              +R LQ EY RLK +HE    SP     E  P SP   +D EL+AEA++LRQHK RLE RM
Sbjct  52226  HRVLQGEYRRLKWKHEEAAASP--QLLESGPGSPPGQQDEELLAEARVLRQHKTRLETRM  52053

Query  1104   QILEDHNKQLESQ  1116
              QILEDHNKQLESQ
Sbjct  52052  QILEDHNKQLESQ  52014


 Score = 75.9 bits (185),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 33/46 (71%), Positives = 41/46 (89%), Gaps = 0/46 (0%)
 Frame = -2

Query  903    TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET  948
              TTSGE +RDFAK LKNKFR+K+YF+KHP+ GYLPVQ+VLE ++ ET
Sbjct  75984  TTSGEKMRDFAKTLKNKFRSKQYFSKHPQRGYLPVQSVLEVESSET  75847


 Score = 67.8 bits (164),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 27/41 (65%), Positives = 33/41 (80%), Gaps = 0/41 (0%)
 Frame = -1

Query  862    IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTP  902
              + FRYRSLK FN DICQ+CF +GR  KG K+HYP++EY TP
Sbjct  76471  MCFRYRSLKQFNVDICQTCFLTGRTTKGKKLHYPIMEYYTP  76349


 Score = 40.8 bits (94),  Expect = 4.6, Method: Compositional matrix adjust.
 Identities = 17/27 (62%), Positives = 20/27 (74%), Gaps = 0/27 (0%)
 Frame = -2

Query  946    METPASSPQLSHDDTHSRIEHYASRLA  972
               + P SSP+L H DTHSRIEH+ASR  
Sbjct  72402  FDRPCSSPRLPHADTHSRIEHFASRYG  72322


>emb|BX510641.9| Zebrafish DNA sequence from clone CH211-106M9 in linkage group 
14, complete sequence
Length=161300

 Score = 97.4 bits (241),  Expect = 4e-17, Method: Compositional matrix adjust.
 Identities = 58/138 (42%), Positives = 71/138 (51%), Gaps = 25/138 (18%)
 Frame = -3

Query  750    HLEDKYRYLFK------------QVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFG--  795
              H+ D Y  LF              V  S+ FCD  R  L +    ++    G  + FG  
Sbjct  88287  HVPDFYLILFY*GYSLSSVFHRVVVIRSSFFCDCFRDSLWVE---KVHSTNGYASCFGA*  88117

Query  796    --------GSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETA  847
                      G+N       CF   + K  IE + FL+WM LEPQS+VWLPVLHRV  AETA
Sbjct  88116  LGMHNEQYGANCCCLSLVCFLQVSGKSAIELSHFLEWMSLEPQSVVWLPVLHRVTVAETA  87937

Query  848    KHQAKCNICKECPIIGFR  865
              KHQA+C ICK+CPI GFR
Sbjct  87936  KHQARCYICKQCPIKGFR  87883


 Score = 82.8 bits (203),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 51/67 (76%), Gaps = 0/67 (0%)
 Frame = -2

Query  661     LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
               +DL  LS+  D   +  L+  +  MD++++I+ LT++Y+RLE+E + L+N+PLCVDMCLN
Sbjct  111424  VDLFKLSSVVDVFREQELQHGEHVMDVVEVIHALTSLYERLEEERSVLINIPLCVDMCLN  111245

Query  721     WLLNVYD  727
               WLLNVYD
Sbjct  111244  WLLNVYD  111224


 Score = 81.3 bits (199),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 35/51 (68%), Positives = 43/51 (84%), Gaps = 0/51 (0%)
 Frame = -2

Query  758    LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQ  808
              LF+QV    G  DQ+ L LLLH++IQ+PRQLGEVA+FGGSN+EPSVRSCF+
Sbjct  94855  LFRQVCGPGGLTDQKHLSLLLHEAIQVPRQLGEVAAFGGSNVEPSVRSCFR  94703


 Score = 77.8 bits (190),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 45/73 (61%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
 Frame = -3

Query  1044   NRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARM  1103
              +R LQ EY RLK +HE    SP     E  P SP   +D EL+AEA++LRQHK RLE RM
Sbjct  60435  HRVLQGEYRRLKWKHEEAAASP--QLLESGPGSPPGQQDEELLAEARVLRQHKTRLETRM  60262

Query  1104   QILEDHNKQLESQ  1116
              QILEDHNKQLESQ
Sbjct  60261  QILEDHNKQLESQ  60223


 Score = 75.9 bits (185),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 33/46 (71%), Positives = 41/46 (89%), Gaps = 0/46 (0%)
 Frame = -2

Query  903    TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET  948
              TTSGE +RDFAK LKNKFR+K+YF+KHP+ GYLPVQ+VLE ++ ET
Sbjct  83455  TTSGEKMRDFAKTLKNKFRSKQYFSKHPQRGYLPVQSVLEVESSET  83318


 Score = 75.5 bits (184),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 0/91 (0%)
 Frame = -1

Query  430     ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLK  489
               E+ P  R  NV+R + KQA   +  WEKL     D  R ++ TLERL ++Q A +EL   
Sbjct  149516  EVSPRRRMLNVSRSVWKQANVASDLWEKLTARCVDRHRHMERTLERLLQIQAAMEELAAA  149337

Query  490     LRQAEVIKGSWQPVGDLLIDSLQDHLEKVKA  520
               L QAE ++ +W+PVGDL IDSLQDH++  K 
Sbjct  149336  LEQAEGVRDAWEPVGDLFIDSLQDHIDATKV  149244


 Score = 69.3 bits (168),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
 Frame = -1

Query  846    TAKHQAKCNICKE--CPI-IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTP  902
              T K      +CK   C I + FRYRSLK FN DICQ+CF +GR  KG K+HYP++EY TP
Sbjct  83999  TVKMNTSITVCKMHLCFITMCFRYRSLKQFNVDICQTCFLTGRTTKGKKLHYPIMEYYTP  83820


 Score = 48.5 bits (114),  Expect = 0.024, Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 0/49 (0%)
 Frame = -1

Query  521     LRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQV  569
                + E++ +KE + H+NDLA +L    + LS  N   LE LN RWKLLQV
Sbjct  138056  FKEELSQVKEGMKHINDLAHELAISDVHLSMDNARALEHLNNRWKLLQV  137910


 Score = 48.1 bits (113),  Expect = 0.027, Method: Compositional matrix adjust.
 Identities = 19/27 (70%), Positives = 24/27 (88%), Gaps = 1/27 (3%)
 Frame = -1

Query  611     PYYINHETQTTCWDHPKMTELYQSLAD  637
               P+Y +H+ QTTCWDHPKMTELYQ+L +
Sbjct  119546  PFY-SHQAQTTCWDHPKMTELYQALGE  119469


 Score = 47.8 bits (112),  Expect = 0.043, Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 13/76 (17%)
 Frame = -1

Query  589     SQHFLSTSVQGPWERAI--SPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAY  646
               + HFLS  ++  +  AI  SP+   Y+++  T       P +  L    ADLNN++FSAY
Sbjct  116027  THHFLSVMLKISYFFAIFFSPHS*-YFLD*MTS------PLLLSL---TADLNNIKFSAY  115878

Query  647     RTAMKLRRLQKAL-CL  661
               RTAMKLR +QKAL C+
Sbjct  115877  RTAMKLRHVQKALRCM  115830


 Score = 46.6 bits (109),  Expect = 0.093, Method: Compositional matrix adjust.
 Identities = 18/28 (64%), Positives = 25/28 (89%), Gaps = 0/28 (0%)
 Frame = -3

Query  568     QVAVEDRVRQLHEAHRDFGPASQHFLST  595
               Q ++E+R++QL +AHRDFGP SQHFLS+
Sbjct  132366  QGSIEERLKQLQDAHRDFGPGSQHFLSS  132283


 Score = 43.9 bits (102),  Expect = 0.63, Method: Compositional matrix adjust.
 Identities = 20/30 (66%), Positives = 21/30 (70%), Gaps = 0/30 (0%)
 Frame = -3

Query  585     FGPASQHFLSTSVQGPWERAISPNKVPYYI  614
               + P S      SVQ PWERAISPNKVPYYI
Sbjct  126792  YCPLSSFVTPGSVQIPWERAISPNKVPYYI  126703


 Score = 43.5 bits (101),  Expect = 0.67, Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 27/39 (69%), Gaps = 0/39 (0%)
 Frame = -2

Query  718     CLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYR  756
               C   +   + +GR G++RVLSFK G++ LC A +++KY+
Sbjct  108307  CFECVCVSFSSGRNGKMRVLSFKMGLVILCNADIQEKYK  108191


 Score = 40.8 bits (94),  Expect = 4.6, Method: Compositional matrix adjust.
 Identities = 17/27 (62%), Positives = 20/27 (74%), Gaps = 0/27 (0%)
 Frame = -1

Query  946    METPASSPQLSHDDTHSRIEHYASRLA  972
               + P SSP+L H DTHSRIEH+ASR  
Sbjct  80438  FDRPCSSPRLPHADTHSRIEHFASRYG  80358


>emb|BX511121.15| Zebrafish DNA sequence from clone DKEYP-110A12 in linkage group 
17, complete sequence
Length=90921

 Score = 97.4 bits (241),  Expect = 5e-17, Method: Compositional matrix adjust.
 Identities = 42/50 (84%), Positives = 45/50 (90%), Gaps = 0/50 (0%)
 Frame = -2

Query  816    IEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFR  865
              IE   F+DWM LEPQSMVWLPVLHRV AAETAKHQAKCNICKECP++GFR
Sbjct  67766  IELQQFVDWMHLEPQSMVWLPVLHRVTAAETAKHQAKCNICKECPMVGFR  67617


 Score = 89.7 bits (221),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 39/55 (70%), Positives = 46/55 (83%), Gaps = 0/55 (0%)
 Frame = -3

Query  758    LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
              LF QVAS+ G C QR+L LLLH+SIQIP QLGE A+FGGSN+EPSVRSCFQ+  +
Sbjct  75604  LFAQVASAAGVCTQRQLELLLHNSIQIPHQLGEAAAFGGSNMEPSVRSCFQYVGS  75440


 Score = 88.6 bits (218),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 49/67 (73%), Gaps = 0/67 (0%)
 Frame = -2

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              +DLL LS A    DQHNL  N Q ++I  IINCL TIY  L+Q H +LVNVPLCVDMCLN
Sbjct  83969  VDLLELSIAQSVFDQHNLTHNGQLLEIPGIINCLCTIYCELQQVHPDLVNVPLCVDMCLN  83790

Query  721    WLLNVYD  727
              WLL VYD
Sbjct  83789  WLLKVYD  83769


 Score = 81.6 bits (200),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 35/46 (76%), Positives = 42/46 (91%), Gaps = 0/46 (0%)
 Frame = -1

Query  903    TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET  948
              TTSGEDVRDF KVLKNKFR+K+YF KHPR+GYLPVQT+LE ++ +T
Sbjct  61602  TTSGEDVRDFTKVLKNKFRSKKYFTKHPRLGYLPVQTILEEEHSDT  61465


 Score = 74.3 bits (181),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 29/43 (67%), Positives = 37/43 (86%), Gaps = 0/43 (0%)
 Frame = -3

Query  862    IGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTT  904
              + FRYRSLKHFNY++CQ+CFFSGR++K H +  PMVEYCTP +
Sbjct  64438  LCFRYRSLKHFNYNVCQTCFFSGRISKDHHLSDPMVEYCTPVS  64310


 Score = 50.4 bits (119),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 23/28 (82%), Positives = 26/28 (92%), Gaps = 0/28 (0%)
 Frame = -2

Query  633    QSLADLNNVRFSAYRTAMKLRRLQKALC  660
              Q +ADL++VRFSAYRTAMK RRLQKALC
Sbjct  87710  QCVADLSHVRFSAYRTAMKSRRLQKALC  87627


 Score = 42.4 bits (98),  Expect = 1.8, Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 28/35 (80%), Gaps = 0/35 (0%)
 Frame = -3

Query  722    LLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYR  756
              LL ++++GR+G+++VLS K G+ SL K  ++DKY+
Sbjct  77416  LLFLFNSGRSGKVQVLSMKIGLFSLSKGPIKDKYK  77312


 Score = 40.4 bits (93),  Expect = 6.4, Method: Compositional matrix adjust.
 Identities = 17/33 (51%), Positives = 24/33 (72%), Gaps = 3/33 (9%)
 Frame = -2

Query  612    YY---INHETQTTCWDHPKMTELYQSLADLNNV  641
              YY    +HE Q+T WDHP+MT+L+QS+  L N+
Sbjct  88865  YY*LPFSHEQQSTSWDHPEMTQLFQSMGLLFNL  88767


>gb|M86893.1|HUMDYST10 H.sapiens dystrophin gene, exon 69
Length=247

 Score = 96.3 bits (238),  Expect = 1e-16, Method: Composition-based stats.
 Identities = 38/40 (95%), Positives = 39/40 (97%), Gaps = 0/40 (0%)
 Frame = +1

Query  865  RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTT  904
            RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTP +
Sbjct  94   RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPVS  213


>ref|XM_001365106.1| PREDICTED: Monodelphis domestica similar to microfilament and 
actin filament cross-linker protein (LOC100025003), mRNA
Length=16749

 Score = 95.5 bits (236),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 127/557 (22%), Positives = 251/557 (45%), Gaps = 32/557 (5%)
 Frame = +1

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  ++++ +QR + GD + I   + K      D+   +  ++ +
Sbjct  12787  ALGQFQHALEELMSWLTHTEELLDAQRPINGDPKVIEVELAKHHVLKNDVLAHQATVDTV  12966

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKE  130
                A   L   ++  +  + + +R+E +   W+ V +  + R QQL   L+ +  +    E
Sbjct  12967  NKAGNELLESSAGDDDASSLRNRLETMNQCWESVLQKTEEREQQLQSTLQQAQGFHSEIE  13146

Query  131    EAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLR-QWQTNVDVANDLALKLL-  188
              +    L +   +L S K      +  ++++    +L   L+ Q +T   + +   L LL 
Sbjct  13147  DFLLRLTRMENQLSSSKPTGGLPETAREQLDAHMELYDQLKGQEETYNQLLDKGRLMLLS  13326

Query  189    RDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEA  248
              RD S   ++    +T  +   W  +  ++ ER++ LEE   L  +F   L++F+ WLT A
Sbjct  13327  RDDSGSGSKTEQSVT-LLEQKWHVVSSKMEERKSKLEEVLNLATEFQNSLQEFINWLTLA  13503

Query  249    ETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEG  308
              E + N+    +    L+ ++  ++  + + +    E+ AH D    LD+   + L+ L  
Sbjct  13504  EQSLNIAPPPS----LILNTILLQ--IDEHKVFANEVNAHRDHIIELDQTGNQ-LKFLSQ  13662

Query  309    SDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDEL  368
                D VL++  L ++  +W ++ ++S+     L+ +  + K+ H + ++L+ WL+  ++ L
Sbjct  13663  KQDVVLIKNLLVSVQSRWEKVVQRSVERGRSLDDARKRAKQFHEAWKKLIDWLEDAENHL  13842

Query  369    SRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEP  428
                +  I  D   ++ Q   H+ F++ L  K+PV  +T+ T R               +E 
Sbjct  13843  DSELEISNDPDKIKLQLSRHKEFQKTLGGKQPVYDTTIRTGRAL-------------KEK  13983

Query  429    RELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDL  488
                LP +   Q +   L     EV  +W+ +   S + Q K++E L    +  +A   L  
Sbjct  13984  TSLPDD--VQKLDNCLG----EVRDKWDTVCGKSVERQHKLEEALLFSGQFMDALQALVD  14145

Query  489    KLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGI  547
               L + E      QPV GDL  D + + ++  K  + E+      V  +  L R+L     
Sbjct  14146  WLYKVEPQLAEDQPVHGDL--DLVMNLMDAHKVFQKELGKRTGTVQVLKRLGRELIENSR  14319

Query  548    QLSPYNLSTLEDLNTRW  564
                + +    L++L+TRW
Sbjct  14320  DDTTWVRVQLQELSTRW  14370


 Score = 68.6 bits (166),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 107/479 (22%), Positives = 213/479 (44%), Gaps = 25/479 (5%)
 Frame = +1

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW +L DWL   +  + S+  +  D + I   + + K   + L  ++P  +  I   
Sbjct  13786  FHEAWKKLIDWLEDAENHLDSELEISNDPDKIKLQLSRHKEFQKTLGGKQPVYDTTIRTG  13965

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              + LK KTS  +    + + +  ++++WD V      R+ +L E L  S Q+++A +    
Sbjct  13966  RALKEKTSLPDDVQKLDNCLGEVRDKWDTVCGKSVERQHKLEEALLFSGQFMDALQALVD  14145

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   +   K   K+L +    V V   L  +L+ + S D
Sbjct  14146  WLYKVEPQLAEDQPVHGDLDLVMNLMDAHKVFQKELGKRTGTVQVLKRLGRELIEN-SRD  14322

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA--  252
              DT  V +  + ++  W ++ K    ++  LE   +  ++F   +   L WL+EAE T   
Sbjct  14323  DTTWVRVQLQELSTRWDTVCKLSVSKQTRLEHALKQAEEFRNAVHMLLEWLSEAEQTLRF  14502

Query  253    -NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDD  311
                 L D T   + L D    KE MK+ ++ + ++ A   +  +        + ++   D 
Sbjct  14503  RGALPDDTEALQSLIDVH--KEFMKKVEEKRVDVNASVAMGED--------ILAMCHPDC  14652

Query  312    AVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSR-  370
                 ++  +  +  ++ E+   +   +  LEA+  +       L+ELL W+Q  +  L + 
Sbjct  14653  VTTIKHWITIIRARFEEVLTWAKQHQQRLEAALSELIANAELLEELLAWIQWAETTLIQR  14832

Query  371    -QAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVR---IFLTEQPLEGLEKLYQ  426
               Q P   +   V+     H+AF  E+  K+P +    +T +   I  T  P   +EK   
Sbjct  14833  DQEPTPQNIDRVKSLISEHQAFMEEMTRKQPDVDRVTKTYKRKAIEPTHAPF--IEKSRS  15006

Query  427    EPREL----PPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQE  481
                + L    PP     + +     +  +++  W+++ L + + QRK+++ L+RL+EL+E
Sbjct  15007  NRKSLGQTAPPPMPLLSQSEAKNPRIHQLSARWQQVWLLALERQRKLNDMLDRLEELKE  15183


 Score = 60.8 bits (146),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 86/381 (22%), Positives = 176/381 (46%), Gaps = 27/381 (7%)
 Frame = +1

Query  37     RVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL---ITAAQNLK--NKTSNQEARTIIT  91
              R M   L D+++ +   +A  +D++  + Q+E++   ++  Q+LK   K S  E R ++ 
Sbjct  9190   REMFSQLADLDDELDSMRAIGRDIDSLQSQIEDVRLFLSKIQSLKLDIKASEGECRQMLE  9369

Query  92     DR-----------IERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWL-EAKEEAEQVLGQA  139
              +            +E +  Q  ++ E  + R++QL   L     +  + KE  +      
Sbjct  9370   EEGSLDLLGLKRELEALSKQCGKLTERGKARQEQLELTLARVGDFYSKMKELNDMTTAAE  9549

Query  140    RAKLESWKEGPYTVDAIQKKITETKQLAKD-LRQWQTNVDVANDLALKLLRDYSAD-DTR  197
                +   W  G   VDAI +++ + K   K+ +   Q  +   N L   L++      D +
Sbjct  9550   EGEALQWVVGT-EVDAINQQLADFKMFQKEQVDPLQMKLQQVNGLGQGLIQSAGKHCDVQ  9726

Query  198    KVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQD  257
               +    E INA W +++K+V++R A L+E      +F   LE  L+WL + E        
Sbjct  9727   GLEHDMEEINARWNTLNKKVAQRIAQLQEALLHCGKFQDALEPLLSWLADTEDLI-----  9891

Query  258    ATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQR  317
              A +K    E  K VK  +++ + LQ  ++        L    ++I +S E +D   ++  
Sbjct  9892   ANQKPPSAE-YKVVKAQIQEQKLLQRLLDDRKATVDMLQAEGERIAQSAELADREKII-S  10065

Query  318    RLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGD  377
              +L+++  +W+EL  K+ + +  LE      K+ H + + +  +L + + +L+   P+G  
Sbjct  10066  QLESLGRRWTELLSKAASRQKQLEDILVLAKQFHETAEPVSDFLSVTEKKLANSEPVGTQ  10245

Query  378    FPAVQKQNDVHRAFKRELKTK  398
                 +Q+Q   H+A + E++++
Sbjct  10246  TAKIQQQIARHKALEEEIESR  10308


 Score = 57.4 bits (137),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 76/360 (21%), Positives = 158/360 (43%), Gaps = 22/360 (6%)
 Frame = +1

Query  12    LADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQ----DLEQRRPQL  67
             LA F  A T+L  WL+  + ++     ++G L     M+  QK  +Q    + E R+PQ 
Sbjct  7525  LASFQAAETQLRPWLTEKELMMS----VLGPLSIDPNMLNAQKQQVQFMLKEFEARKPQH  7692

Query  68    EELITAAQN-LKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWL  126
             E+L  AAQ  L        + + + + ++ I N+W E+ + L +R  Q+++ L  STQ+ 
Sbjct  7693  EQLNQAAQGILTGPGDGSPSASQVQEELQNINNKWIELTDRLNSRSSQIDQTLVKSTQYQ  7872

Query  127   EAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA----ND  182
             E  +   + +     +L           A+++++ ET ++  DL Q    +  A    ++
Sbjct  7873  ELLQNLSERVKAVGQQLNGQSAISTQPAAVKQQLEETSEIRSDLEQLDHEITDAQALCDE  8052

Query  183   LALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFL  242
             L+  +   Y  D+ RK     E +    + +    ++R   L+      QQF    ++  
Sbjct  8053  LSTLIGEQYLKDELRKR---LETVALPLKGLEDLAADRMNKLQTALASTQQFQQMFDELR  8223

Query  243   AWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKI  302
              WL + +      Q  + K   L         +++ ++ Q  +   +  Y  +    + +
Sbjct  8224  TWLDDKQNQQAKAQPISAKLDRLHCQ------LQEQEEFQKSLNQRSGSYEVIIIEGESL  8385

Query  303   LRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQ  362
             L S+   ++   LQ +L  +   W EL KK+ + +S L+    + ++    +++L+ W++
Sbjct  8386  LLSVHPGEEKKTLQSQLIELKSHWEELSKKAADRQSRLKDCLQKAQKYQWHVEDLIPWIE  8565


 Score = 55.1 bits (131),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 120/583 (20%), Positives = 238/583 (40%), Gaps = 56/583 (9%)
 Frame = +1

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F   + EL+ W+     +I        D E + +   + +   + + + +P +++L+   
Sbjct  11470  FWETYEELSPWIEETQTLISQLPPPAIDHEQLKQQQEEMRQLRESIAEHKPHIDKLLKIG  11649

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAE-  133
                LK    N+    ++ ++ ++ +  +  ++E ++ R   L+E +  S Q  E  ++ E 
Sbjct  11650  PQLKELNPNE--GEMVQEKYQKAETTYARIKEEVRRRALALDEAVSQSAQISEFHDKMEP  11823

Query  134    --QVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLL-RD  190
                + L    ++L      P  VD I++ +++ K  A +L + Q + +       +L+ R 
Sbjct  11824  MLETLENLSSRLRIPPLIPAEVDKIRECLSDNKSTAMELEKLQPSFEALKRRGEELIGRS  12003

Query  191    YSADDTRKVHMITENINAS---WRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTE  247
                AD       I + ++     W  I  +  ERE    +   L ++F  D+   LA + +
Sbjct  12004  QGADKDLAAKEIQDKLDQMVFFWEDIKAQAEEREVKFLDVLELAEKFWYDMAALLATIKD  12183

Query  248    AETTANVLQDATRKERLLEDSKGVK-ELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSL  306
                 T +++ D         +S G+   ++KQ  +    I+  TD  H   E     +R L
Sbjct  12184  ---TQDIVHDL--------ESPGIDPSIIKQQVEAAETIKEETDGLHEELE----FIRIL  12318

Query  307    E-------GSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLV  359
                      G  +   +++ +D MN  W  L K        LE +     +   +LQ +  
Sbjct  12319  GADLIFACGETEKPEVKKSIDEMNNAWENLNKTWRERLEKLEEAMQAAVQYQDTLQTMFD  12498

Query  360    WLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLE  419
              WL     +L    P+G D   V+ Q +  + FK E                  + +Q +E
Sbjct  12499  WLDNTVIKLCNMPPVGTDLNTVKDQLNEMKEFKME------------------VYQQQIE  12624

Query  420    GLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQEL  479
               +EKL  +   +  +   +    ++R+   E+   WE L    A  Q K++  L  L + 
Sbjct  12625  -MEKLNHQGELMLKKATDETDRDIIREPLTELKHLWENLGEKIAHRQHKLEGALLALGQF  12801

Query  480    QEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDL  538
              Q A +EL   L   E +  + +P+ GD  +  ++  L K   L+ ++   +  V  VN  
Sbjct  12802  QHALEELMSWLTHTEELLDAQRPINGDPKV--IEVELAKHHVLKNDVLAHQATVDTVNKA  12975

Query  539    ARQL--TTLGIQLSPYNLSTLEDLNTRWKLLQVAVEDRVRQLH  579
                +L  ++ G   +    + LE +N  W+ +    E+R +QL 
Sbjct  12976  GNELLESSAGDDDASSLRNRLETMNQCWESVLQKTEEREQQLQ  13104


 Score = 50.4 bits (119),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 128/304 (42%), Gaps = 34/304 (11%)
 Frame = +1

Query  97    IQNQWDEVQEHLQNRRQQLNEMLKDST----------QWLEAKEEAEQVLGQARAKLESW  146
             +  Q++++   LQ RR  L  ML              QWLE+KE A +    + +     
Sbjct  7114  VSQQYEKLGGVLQERRDSLLAMLSSMQEVQEEASSLLQWLESKENALKAFDASSS-----  7278

Query  147   KEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDY-SADDTRKVHMITEN  205
                P   + ++ +    K    +L Q    +    +    LL+ Y ++ + +    + E 
Sbjct  7279  ---PTKTETMRAQAECNKAFLAELEQNSPKIHKVKEALAGLLKKYPNSQEAKHWKEMEEE  7449

Query  206   INASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  265
             +++ W   ++  + R+  LEE+   L  F     +   WLTE E   +VL   +    +L
Sbjct  7450  LSSRWERANEVTAARQQKLEESANQLASFQAAETQLRPWLTEKELMMSVLGPLSIDPNML  7629

Query  266   EDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRS-LEGSDDAVLLQRRLDNMNF  324
                K      +Q Q +  E EA    +  L++ +Q IL    +GS  A  +Q  L N+N 
Sbjct  7630  NAQK------QQVQFMLKEFEARKPQHEQLNQAAQGILTGPGDGSPSASQVQEELQNINN  7791

Query  325   KWSELRKKSLNIRS----HLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPA  380
             KW EL  + LN RS         S Q++ L   LQ L   ++    +L+ Q+ I     A
Sbjct  7792  KWIELTDR-LNSRSSQIDQTLVKSTQYQEL---LQNLSERVKAVGQQLNGQSAISTQPAA  7959

Query  381   VQKQ  384
             V++Q
Sbjct  7960  VKQQ  7971


 Score = 41.6 bits (96),  Expect = 2.7, Method: Compositional matrix adjust.
 Identities = 115/557 (20%), Positives = 222/557 (39%), Gaps = 91/557 (16%)
 Frame = +1

Query  50    IIKQKATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQ  109
             I++QK++++   +   Q  E           T++    T +  ++  +  Q+ ++ +  Q
Sbjct  6274  IVRQKSSLEATREMVTQFME-----------TADGATATGLQGKLAEVSEQFSQLCQRQQ  6420

Query  110   NRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKD  169
              +   L ++L     +    E+ +Q L      L +  +    +    ++I E   L  +
Sbjct  6421  EKESSLKKLLPQVEMFEHISEKLQQFLDSRARMLATGNQPDRDIAQFSQQIQE---LNLE  6591

Query  170   LRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHR  229
             + + Q N+D    L + L     A DT +     + +   +  + K V ERE        
Sbjct  6592  MGEQQENLDALEHLVIDLSSCGFALDTSQHEERVQKLKKDFMGLQKSVQEREKETSSCQE  6771

Query  230   LLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQW--QDLQ-GEIE  286
              L +F   ++    WL E+E    V++ +     L +  + ++ L+  W  + LQ  EI 
Sbjct  6772  QLDEFRKLVQALQKWLKESEGNMPVMESSMSTRDLQKQIEQLEALLDDWTSKGLQVEEIN  6951

Query  287   AHTDVYHNL---------DENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIR  337
                    NL            +  +L SL GS  +V       N      +L +    I+
Sbjct  6952  RKGLALENLIVEITAPETQSKTGSVLPSLGGSVGSV-------NGYHTCKDLTE----IQ  7098

Query  338   SHLEASSDQWKRLHLSLQE---------------------LLVWLQLKDDEL----SRQA  372
              H+   S Q+++L   LQE                     LL WL+ K++ L    +  +
Sbjct  7099  CHMSDVSQQYEKLGGVLQERRDSLLAMLSSMQEVQEEASSLLQWLESKENALKAFDASSS  7278

Query  373   PIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELP  432
             P   +   ++ Q + ++AF  EL+   P         +I   ++ L GL K Y      P
Sbjct  7279  PTKTE--TMRAQAECNKAFLAELEQNSP---------KIHKVKEALAGLLKKY------P  7407

Query  433   PEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQ  492
               + A++     ++  EE+++ WE+ N  +A  Q+K++E+  +L   Q A  +L   L +
Sbjct  7408  NSQEAKH----WKEMEEELSSRWERANEVTAARQQKLEESANQLASFQAAETQLRPWLTE  7575

Query  493   AEVIKGSWQPVGDLLIDS--LQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLS  550
              E++      +G L ID   L    ++V+ +  E    K     +N  A+ + T     S
Sbjct  7576  KELMMS---VLGPLSIDPNMLNAQKQQVQFMLKEFEARKPQHEQLNQAAQGILTGPGDGS  7746

Query  551   PYNLST---LEDLNTRW  564
             P        L+++N +W
Sbjct  7747  PSASQVQEELQNINNKW  7797


>gb|AF070567.1|AF070567 Homo sapiens clone 24544 beta-dystrobrevin mRNA, partial cds
Length=1559

 Score = 92.8 bits (229),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 137/313 (43%), Gaps = 67/313 (21%)
 Frame = +3

Query  820   LFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDIC  877
             +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR  +  NY +C
Sbjct  27    MFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRCQQCHNYQLC  206

Query  878   QSCFFSGRVAKGHKMHYPMVEY-------------------CTPTT---------SGEDV  909
             Q+CF+ G     H   + M E+                   C PT            E  
Sbjct  207   QNCFWRGHAGGPHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPTREPPHPVFPEQPEKP  386

Query  910   RDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHD------DTHSR  963
              D A ++  +  T         M    V  +  G  + TP    Q S D      D H+ 
Sbjct  387   LDLAHIVPPRPLTN--------MNDTMVSHMSSG--VPTPTKRLQYSQDIPSHLADEHAL  536

Query  964   IEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILI  1023
             I  Y +RL      + + + DS S    +D+EH LI  Y   L  ++  +  R P  +  
Sbjct  537   IASYVARL-----QHCARVLDSPS---RLDEEHRLIARYAARLAAEA-GNVTRPPTDLSF  689

Query  1024  SLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDA  1083
             + ++ +  +  +++A+LE +NR +  E  RL+ +HE              PT  ++ ++ 
Sbjct  690   NFDANK--QQRQLIAELENKNREILQEIQRLRLEHEQAS----------QPTPEKAQQNP  833

Query  1084  ELIAEAKLLRQHK  1096
              L+AE +LLRQ K
Sbjct  834   TLLAELRLLRQRK  872


>ref|XM_001515580.1| PREDICTED: Ornithorhynchus anatinus similar to macrophin 1 (LOC100085264), 
mRNA
Length=21111

 Score = 92.8 bits (229),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 137/588 (23%), Positives = 259/588 (44%), Gaps = 34/588 (5%)
 Frame = +1

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  ++++ +QR + GD + I   + K      D+   +  +E +
Sbjct  17605  ALGQFQHALEELMGWLTHTEELLDAQRPINGDPKVIEVELAKHHVLKNDVLAHQATVETV  17784

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKE  130
                A   L   ++  +A ++ T R+E +   W+ V +  + R QQL   L+ +  +    E
Sbjct  17785  NKAGNELLESSAGDDASSLRT-RLETMNQCWESVLQKTEEREQQLQSTLQQAQGFHSEIE  17961

Query  131    EAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLR-QWQTNVDVANDLALKLLR  189
              +    L +   +L + K      +  ++++    +L   L+ + +    + +   L LL 
Sbjct  17962  DFLLELTRMENQLSASKPTGGLPETAREQLDAHLELHSQLKAKEELYGQLLDKGRLMLLS  18141

Query  190    DYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAE  249
                 +    K       +   W+++  ++ ER++ LEE   L  +F   L++F+ WLT AE
Sbjct  18142  RQDSGTGSKTEQSIALLEQKWQAVSSKMEERKSKLEEVLSLATEFQNSLQEFINWLTLAE  18321

Query  250    TTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGS  309
               + NV   A     +L    G  +  K + +   E+ AH D    LD+   + L+ L   
Sbjct  18322  QSLNV---AASPSLILNTVLGQIDEHKVFAN---EVNAHRDQIIELDQTGNQ-LKFLSQK  18480

Query  310    DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELS  369
               D VL++  L ++  +W ++ ++S+     L+ +  + K+ H + ++L+ WL+  +  L 
Sbjct  18481  QDVVLIKNLLVSVQSRWEKVVQRSVERGRALDDARKRAKQFHEAWKKLIDWLEDAEKLLD  18660

Query  370    RQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPR  429
               +  I  D   ++ Q   H+ F++ L  K+PV  +T+ T R  L E+ L           
Sbjct  18661  SELEISNDPDKIKLQLSKHKEFQKTLGGKQPVYDTTIRTGRA-LKEKAL-----------  18804

Query  430    ELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLK  489
               LP +   Q +  LL     EV  +W+ +   S + Q K++E L    +  +A   L   
Sbjct  18805  -LPDD--TQKLDNLLG----EVRDKWDTVCGKSVERQHKLEEALLFSGQFMDALQALVDW  18963

Query  490    LRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQ  548
              L + E      QPV GDL  D + + ++  K  + E+      V  +    R+L      
Sbjct  18964  LYKVEPQLAEDQPVHGDL--DLVMNLMDAHKVFQKELGKRTGTVQVLKRSGRELIENSRD  19137

Query  549    LSPYNLSTLEDLNTRWKL---LQVAVEDRVRQLHEAHRDFGPASQHFL  593
               + +    L++L+TRW     L V+ + R+ Q  +   +F  A    L
Sbjct  19138  DTTWVKGQLQELSTRWDTVCKLSVSKQTRLEQALKQAEEFRNAVHMLL  19281


 Score = 64.3 bits (155),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 105/478 (21%), Positives = 213/478 (44%), Gaps = 23/478 (4%)
 Frame = +1

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW +L DWL   ++++ S+  +  D + I   + K K   + L  ++P  +  I   
Sbjct  18601  FHEAWKKLIDWLEDAEKLLDSELEISNDPDKIKLQLSKHKEFQKTLGGKQPVYDTTIRTG  18780

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              + LK K    +    + + +  ++++WD V      R+ +L E L  S Q+++A +    
Sbjct  18781  RALKEKALLPDDTQKLDNLLGEVRDKWDTVCGKSVERQHKLEEALLFSGQFMDALQALVD  18960

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   +   K   K+L +    V V      +L+ + S D
Sbjct  18961  WLYKVEPQLAEDQPVHGDLDLVMNLMDAHKVFQKELGKRTGTVQVLKRSGRELIEN-SRD  19137

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT---  251
              DT  V    + ++  W ++ K    ++  LE+  +  ++F   +   L WL+EAE T   
Sbjct  19138  DTTWVKGQLQELSTRWDTVCKLSVSKQTRLEQALKQAEEFRNAVHMLLEWLSEAEQTLRF  19317

Query  252    ANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDD  311
                 L D T   + L D    KE MK+ ++ + ++ A   +         +++ ++   D 
Sbjct  19318  RGALPDDTEALQSLIDIH--KEFMKKVEEKRVDVNAAVGMG--------EVILAVCHPDC  19467

Query  312    AVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSR-  370
                 ++  L  +  ++ E+   +   +  LEA+  +       L+ELL W+Q  +  L + 
Sbjct  19468  ITNIKHWLTVIRARFEEVLTWAKQHQQRLEAALSELVANAELLEELLAWIQWAETTLIQR  19647

Query  371    -QAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG--LEKLYQE  427
               Q P   +   V+     H+AF  E+  K+P +    +T +   +E P     +EK    
Sbjct  19648  DQEPTPQNIDQVKALISEHQAFMEEMTRKQPDVDRVTKTYKRKASE-PTHAPFIEKSRSN  19824

Query  428    PREL----PPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQE  481
               + L    PP     + +     +  +++  W+++ L + + QRK+++ L+RL+EL+E
Sbjct  19825  RKSLSQPTPPPMPILSQSEAKNPRINQLSARWQQVWLLALERQRKLNDALDRLEELKE  19998


 Score = 57.8 bits (138),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 83/364 (22%), Positives = 165/364 (45%), Gaps = 30/364 (8%)
 Frame = +1

Query  12     LADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQ----DLEQRRPQL  67
              L  F  A  +L  WL   + ++     ++G L     M+  QK  +Q    + E RR Q 
Sbjct  12343  LDSFQAAEAQLRPWLKEKELMMS----VLGPLSIDPNMLNAQKQQVQFMLKEFEARRQQH  12510

Query  68     EELITAAQNLKNKTSNQEARTI-ITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWL  126
              E+L  AAQ +     +    T    D++E I  +W E+ E L +R  Q+++ +  STQ+ 
Sbjct  12511  EQLNQAAQGIFAGPGDASPSTGQARDQLEGINQKWVELTERLNSRSSQIDQAIVKSTQYQ  12690

Query  127    EA-KEEAEQV--LGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVA---  180
              E  +  AEQV  +GQ  +   +    P   DA+++++ ET ++  DL +    +  A   
Sbjct  12691  ELLRGLAEQVKAVGQQLSGQSAISAQP---DAVKQQLEETSEIRSDLERLDHEIAEAQAL  12861

Query  181    -NDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLE  239
               + L+L +   Y  D+ RK     E +    + +    ++R   L+      QQF    +
Sbjct  12862  CDQLSLLIGEQYLKDELRKR---LETVALPLKGLEDLAADRLNRLQTALASTQQFQQMFD  13032

Query  240    KFLAWLTEAETT-ANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDEN  298
              +  AWL +     A     + + ERL       +  +++ ++ Q  +  H+  Y  +   
Sbjct  13033  ELRAWLDDKRNQQARAGPTSAKLERL-------QAQLQEQEEFQKSLNQHSGSYEVIVAE  13191

Query  299    SQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELL  358
               + +L S++  ++   LQ +L  +   W+EL K + + ++ L+    + ++    +++L+
Sbjct  13192  GETLLLSVQPGEEKAALQGQLAALRSHWAELGKHAADRQARLKDCLQKAQKYRWYVEDLV  13371

Query  359    VWLQ  362
               W++
Sbjct  13372  PWIE  13383


 Score = 57.8 bits (138),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 92/425 (21%), Positives = 172/425 (40%), Gaps = 23/425 (5%)
 Frame = +1

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F  A   L  WL+  + +I +Q+    + + +   I +QK   + L+ R+  +E +I A 
Sbjct  14653  FQDALEPLLSWLTDTEDLIANQKPPSAEYKVVKAQIQEQKLLQRLLDDRKATVE-MIQAE  14829

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
                   + +    +  I  ++E ++ +W  +      R++QL E+L  + ++ E  E    
Sbjct  14830  GGRIAQAAEPADQEKIVGQLESLEGRWAGLLHKAAARQRQLEEILVLAKEFHETTEPISD  15009

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L     KL + +        IQ++I   K L  ++      V +A  +   L       
Sbjct  15010  FLSVTEKKLANSEPVGTQTAKIQQQIVRHKALEDEVESRAAGVQLAVGVGRSLSSLTGPT  15189

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANV  254
              +   +    + + A +R + +R   R A L +     + F       L WL E E     
Sbjct  15190  ERGALAERLDALQARYREVRERCGRRAALLGQALCDARLFGDGEVAVLNWLAEVEDKLGS  15369

Query  255    LQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDE---NSQKILRSLEGSDD  311
              +     K  +L+         KQ  D     E   +   N+D+   N Q +L+   G ++
Sbjct  15370  VSVKDYKRDVLQ---------KQHADQLALNEEIVNRKKNVDQAIKNGQALLKQTTG-EE  15519

Query  312    AVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSR-  370
               +L+Q +LD +  +++++   S      LE +     +   + +EL  W+    DEL+  
Sbjct  15520  VLLIQEKLDGIKTRYADITATSSKALRTLEQARQLATKFQATHEELTGWMNTVADELAAS  15699

Query  371    --QAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPL---EGLEKLY  425
                Q+P G   P  Q++    +  K+E+     V+ +  E  R  L   P    EGL+KL 
Sbjct  15700  GGQSPTGEQIPQFQQR---QKELKKEVMEHRLVLDTVNEVSRALLELVPWRAREGLDKLV  15870

Query  426    QEPRE  430
               E  E
Sbjct  15871  SEANE  15885


 Score = 54.7 bits (130),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 154/338 (45%), Gaps = 38/338 (11%)
 Frame = +1

Query  106    EHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQ  165
              E   NR ++LN M         A EE+E +          W  G   VDAI +++ + K 
Sbjct  14314  EDFYNRLKELNRMTT-------AAEESEAL---------QWVVGT-EVDAINQQLADFKM  14442

Query  166    LAKD-LRQWQTNVDVANDLALKLLRDYSAD-DTRKVHMITENINASWRSIHKRVSEREAA  223
                K+ +   Q  +   N L   L++    + D + +    E INA W +++K+V++R A 
Sbjct  14443  FQKEQVDPLQLKLQQVNGLGQGLIQSAGKNCDVQGLEHDMEAINARWNTLNKKVAQRIAQ  14622

Query  224    LEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQG  283
              L+E      +F   LE  L+WLT+ E        A +K    E  K VK  +++ + LQ 
Sbjct  14623  LQEALLHCGKFQDALEPLLSWLTDTEDLI-----ANQKPPSAE-YKVVKAQIQEQKLLQR  14784

Query  284    EIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEAS  343
               ++        +     +I ++ E +D   ++  +L+++  +W+ L  K+   +  LE  
Sbjct  14785  LLDDRKATVEMIQAEGGRIAQAAEPADQEKIVG-QLESLEGRWAGLLHKAAARQRQLEEI  14961

Query  344    SDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVI-  402
                  K  H + + +  +L + + +L+   P+G     +Q+Q   H+A + E++++   + 
Sbjct  14962  LVLAKEFHETTEPISDFLSVTEKKLANSEPVGTQTAKIQQQIVRHKALEDEVESRAAGVQ  15141

Query  403    --------MSTLE--TVRIFLTEQPLEGLEKLYQEPRE  430
                      +S+L   T R  L E+ L+ L+  Y+E RE
Sbjct  15142  LAVGVGRSLSSLTGPTERGALAER-LDALQARYREVRE  15252


 Score = 47.8 bits (112),  Expect = 0.036, Method: Compositional matrix adjust.
 Identities = 119/551 (21%), Positives = 219/551 (39%), Gaps = 57/551 (10%)
 Frame = +1

Query  42     DLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQW  101
              D+  + E I + K  +  L +  PQL+EL            N E   ++ +R    +  +
Sbjct  16399  DMRQLRESIAEHKPHIDKLLKIGPQLKEL------------NPEEGEMVQERYRAAEAVY  16542

Query  102    DEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAE---QVLGQARAKLESWKEGPYTVDAIQK  158
                ++E ++ R   L+E +  S Q  E  ++ E   + L    ++L      P  V+ I++
Sbjct  16543  ARIKEEVRLRALALDEAVSQSAQIAEFHDKIEPMLETLENLSSRLRVPPLIPAEVEKIRE  16722

Query  159    KITETKQLAKDLRQWQTNVDVANDLALKLL-RDYSADDTRKVHMITENINAS---WRSIH  214
               I + K    +L + Q +         +L+ R    D       I + ++     W  I 
Sbjct  16723  CIGDNKNATVELEKLQPSFGALKRRGEELIGRSQGPDKDLAAKEIQDKLDQMVFFWEDIK  16902

Query  215    KRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVK-E  273
               R  ERE    +   L ++F  D+   LA + +   T +++ D         +S G+   
Sbjct  16903  ARAEEREMKFLDVLELAEKFWFDMAALLATIRD---TQDIVHDL--------ESPGIDPS  17049

Query  274    LMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLE---GSDDAVLLQRRLDNMNFKWSELR  330
              ++KQ  +    I+  TD  H   E  + +   L    G  +   +++ +D MN  W  L 
Sbjct  17050  IIKQQVEAAETIKEETDGLHEELEFIRILGADLIFACGETEKPEVKKSIDEMNNAWENLS  17229

Query  331    KKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRA  390
              K        LE +     +   +LQ +  WL     +L    P+G D   V++Q +  + 
Sbjct  17230  KMWKERLERLEEAMQAAVQYQDALQSMFDWLDNTVIKLCNMPPVGTDLNTVKEQLNEMKE  17409

Query  391    FKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEE  450
              FK E                  + +Q +E +EKL  +   +  +   +    ++R+   E
Sbjct  17410  FKTE------------------VYQQQIE-MEKLNHQGELMLKKATDETDRDIIREPLTE  17532

Query  451    VNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLID  509
              +   WE L       Q K++  L  L + Q A +EL   L   E +  + +P+ GD  + 
Sbjct  17533  LKHLWENLGEKITRRQHKLEGALLALGQFQHALEELMGWLTHTEELLDAQRPINGDPKV-  17709

Query  510    SLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLST-LEDLNTRWKLLQ  568
               ++  L K   L+ ++   +  V  VN    +L          +L T LE +N  W+ + 
Sbjct  17710  -IEVELAKHHVLKNDVLAHQATVETVNKAGNELLESSAGDDASSLRTRLETMNQCWESVL  17886

Query  569    VAVEDRVRQLH  579
                 E+R +QL 
Sbjct  17887  QKTEEREQQLQ  17919


>ref|XM_001084824.1| PREDICTED: Macaca mulatta similar to dystrobrevin, beta isoform 
1 (LOC696167), mRNA
Length=774

 Score = 92.8 bits (229),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 121/269 (44%), Gaps = 58/269 (21%)
 Frame = +1

Query  637  DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDI----LQIIN  692
            + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I    L+ + 
Sbjct  28   NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETV-  204

Query  693  CLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLE  752
             +++IY +L +       +P                  T +I V                
Sbjct  205  -ISSIYYQLNKR------LP-----------------STHQINV----------------  264

Query  753  DKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANN  812
                  F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF     
Sbjct  265  ------FSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP---Q  411

Query  813  KPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLK  870
            + +I   +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR  +
Sbjct  412  QRKIMLNMFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRCQQ  591

Query  871  HFNYDICQSCFFSGRVAKGHKMHYPMVEY  899
              NY +CQ+CF+ G     H   + M E+
Sbjct  592  CHNYQLCQNCFWRGHAGGPHSNQHQMKEH  678


>dbj|AK294174.1| Homo sapiens cDNA FLJ60475 complete cds, highly similar to Dystrobrevin 
beta
Length=1857

 Score = 92.4 bits (228),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 137/313 (43%), Gaps = 67/313 (21%)
 Frame = +3

Query  820   LFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDIC  877
             +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR  +  NY +C
Sbjct  549   MFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRCQQCHNYQLC  728

Query  878   QSCFFSGRVAKGHKMHYPMVEY-------------------CTPTT---------SGEDV  909
             Q+CF+ G     H   + M E+                   C PT            E  
Sbjct  729   QNCFWRGHAGGPHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPTREPPHPVFPEQPEKP  908

Query  910   RDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHD------DTHSR  963
              D A ++  +  T         M    V  +  G  + TP    Q S D      D H+ 
Sbjct  909   LDLAHIVPPRPLTN--------MNDTMVSHMSSG--VPTPTKRLQYSQDIPSHLADEHAL  1058

Query  964   IEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILI  1023
             I  Y +RL      + + + DS S    +D+EH LI  Y   L  ++  +  R P  +  
Sbjct  1059  IASYVARL-----QHCARVLDSPS---RLDEEHRLIARYAARLAAEA-GNVTRPPTDLSF  1211

Query  1024  SLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDA  1083
             + ++ +  +  +++A+LE +NR +  E  RL+ +HE              PT  ++ ++ 
Sbjct  1212  NFDANK--QQRQLIAELENKNREILQEIQRLRLEHEQAS----------QPTPEKAQQNP  1355

Query  1084  ELIAEAKLLRQHK  1096
              L+AE +LLRQ K
Sbjct  1356  TLLAELRLLRQRK  1394


>dbj|AK225724.1| Homo sapiens mRNA for dystrobrevin, beta isoform 4 variant, clone: 
TST03693
Length=2177

 Score = 92.4 bits (228),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 137/313 (43%), Gaps = 67/313 (21%)
 Frame = +3

Query  820   LFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFNYDIC  877
             +FLD M  +P  Q +VWLP++HR+A  E   H  +C+ C+   ++GFRYR  +  NY +C
Sbjct  633   MFLDTMMADPPPQCLVWLPLMHRLAHVENVFHPVECSYCRCESMMGFRYRCQQCHNYQLC  812

Query  878   QSCFFSGRVAKGHKMHYPMVEY-------------------CTPTT---------SGEDV  909
             Q+CF+ G     H   + M E+                   C PT            E  
Sbjct  813   QNCFWRGHAGGPHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPTREPPHPVFPEQPEKP  992

Query  910   RDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQLSHD------DTHSR  963
              D A ++  +  T         M    V  +  G  + TP    Q S D      D H+ 
Sbjct  993   LDLAHIVPPRPLTN--------MNDTMVSHMSSG--VPTPTKRLQYSQDIPSHLADEHAL  1142

Query  964   IEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILI  1023
             I  Y +RL      + + + DS S    +D+EH LI  Y   L  ++  +  R P  +  
Sbjct  1143  IASYVARL-----QHCARVLDSPS---RLDEEHRLIARYAARLAAEA-GNVTRPPTDLSF  1295

Query  1024  SLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDA  1083
             + ++ +  +  +++A+LE +NR +  E  RL+ +HE              PT  ++ ++ 
Sbjct  1296  NFDANK--QQRQLIAELENKNREILQEIQRLRLEHEQAS----------QPTPEKAQQNP  1439

Query  1084  ELIAEAKLLRQHK  1096
              L+AE +LLRQ K
Sbjct  1440  TLLAELRLLRQRK  1478


 Score = 50.1 bits (118),  Expect = 0.008, Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
 Frame = +2

Query  637  DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDI--LQIINCL  694
            + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  242  NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  421

Query  695  TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
            ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  422  SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  595

Query  751  LEDKYR------YLFKQ  761
            + DK R      Y+F+ 
Sbjct  596  MLDKLR*KDNAKYVFRH  646


>ref|XM_002221469.1| Branchiostoma floridae hypothetical protein (BRAFLDRAFT_123563) 
mRNA, complete cds
Length=2976

 Score = 92.0 bits (227),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 113/234 (48%), Gaps = 23/234 (9%)
 Frame = +1

Query  628   MTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQND--QPM  685
             MTE+     D+  +R   YRTA KLR +QK   L L+ +    +A  ++ L   +    +
Sbjct  1069  MTEMRTQNFDV--IRLGTYRTACKLRFVQKKTNLHLVDIWNMIEAFRENGLNTLELTTEL  1242

Query  686   DILQIINCLTTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKT  741
             ++ ++ + +++I      RL   H   +NV   + + LNWL++ YD     ++ V S K 
Sbjct  1243  NVSRVESIVSSIMYQLNKRLPSTHQ--INVDQSISLLLNWLMSAYDPEALAKMSVFSIKM  1416

Query  742   GIISLCKAHLEDKYRY------LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFG  795
              + ++C   L     +      +F Q++ S G     +    L +++ +P  + E  SFG
Sbjct  1417  ALSTMCAGKLHKATSFITSSSDIFSQISDSRGQLVYPKFDQFLQEALALPSAVYEGPSFG  1596

Query  796   GSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQ--SMVWLPVLHRVAAAETA  847
              +  E + +SCFQ A     +    FLD M  +P    +VWLP++HR+A  E A
Sbjct  1597  YN--ETAAKSCFQSAQ---RVTINDFLDVMMADPGPPCLVWLPLMHRMANVENA  1743


 Score = 49.3 bits (116),  Expect = 0.013, Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
 Frame = +1

Query  958   DDTHSRIEHYASRLAEMENSNGS-------YLNDSISPNESIDDEHLLIQHYCQSLNQDS  1010
             DD H  I  YA+RLA  +N   +        L+ S SP   +    L +    Q     +
Sbjct  1780  DDEHRLIARYAARLAAEQNEQNTTPVDVSPLLHQSRSPGTEL---ALNLDANRQQRELIA  1950

Query  1011  PLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEH--KGLSPLPS  1068
              L    SP ++   L    R + + +L++ + +NR +  E  RL+Q+H+   +G+     
Sbjct  1951  ELEHKNSPREVAEKLAQWLREQTD-LLSECQHKNREIMREIQRLRQEHDEASRGM-----  2112

Query  1069  PPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQ  1128
                         R+  L+AE +LLRQ K  LE RM  L++  ++L  QL  L +LL+   
Sbjct  2113  ---------DESRNPTLLAELRLLRQRKDELELRMSALQESRRELMVQLEGLMKLLKSHG  2265

Query  1129  AEAKVNGTTVSSPSTSLQRS  1148
             +      T   SP T   +S
Sbjct  2266  SSPTPRSTPGGSPLTGSAKS  2325


>emb|AL672064.17| Mouse DNA sequence from clone RP23-91G19 on chromosome X Contains 
the Drp2 gene for dystrophin related protein 2, the Taf7l 
gene for TAF7-like RNA polymerase II TATA box binding protein 
(TBP)-associated factor, a novel pseudogene, the Timm8a1 
gene for translocase of inner mitochondrial membrane 8 homolog 
a1 (yeast), the 3' end of the Btk gene for Bruton agammaglobulinemia 
tyrosine kinase and two CpG islands, complete 
sequence
Length=152177

 Score = 90.5 bits (223),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 39/60 (65%), Positives = 46/60 (76%), Gaps = 0/60 (0%)
 Frame = +2

Query  807    FQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRY  866
              F  +  KP IEA+ FL+W+ LEPQSMVWL VLHRV  AE  KHQ KC+IC++CPI GFRY
Sbjct  42443  FL*STGKPVIEASQFLEWVNLEPQSMVWLAVLHRVTIAEQVKHQTKCSICRQCPIKGFRY  42622


 Score = 87.4 bits (215),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 39/54 (72%), Positives = 47/54 (87%), Gaps = 0/54 (0%)
 Frame = +3

Query  758    LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN  811
              LF QVA+S   CDQR LG LLH++IQ+PRQLGEVA+FGGSN+EPSVRSCF+F +
Sbjct  42021  LFSQVANSGSQCDQRHLGALLHEAIQVPRQLGEVAAFGGSNVEPSVRSCFRFVS  42182


 Score = 84.0 bits (206),  Expect = 5e-13, Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 55/67 (82%), Gaps = 0/67 (0%)
 Frame = +2

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              +DL++L+ A +  ++H+L+ ++  MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LN
Sbjct  40709  VDLVTLTTALEIFNEHDLQASEHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLN  40888

Query  721    WLLNVYD  727
              WLLNV+D
Sbjct  40889  WLLNVFD  40909


 Score = 81.6 bits (200),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 0/88 (0%)
 Frame = +2

Query  433    PEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQ  492
              P +R QN++R + KQA   +  WEKL     D  R I+ TLE L E+Q A +EL   L Q
Sbjct  34589  PRQRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIEHTLEHLLEIQGAMEELSSTLTQ  34768

Query  493    AEVIKGSWQPVGDLLIDSLQDHLEKVKA  520
              AE ++ +W+P+GDL IDSL +H++ +K 
Sbjct  34769  AEGVRATWEPIGDLFIDSLPEHIQAIKV  34852


 Score = 74.7 bits (182),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 32/46 (69%), Positives = 39/46 (84%), Gaps = 0/46 (0%)
 Frame = +1

Query  903    TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET  948
              TTS E++RDFA  LKNKFR+K+YF+KHP+ GYLPVQ+VLE D  ET
Sbjct  47005  TTSSENMRDFATTLKNKFRSKQYFSKHPQRGYLPVQSVLESDCSET  47142


 Score = 68.6 bits (166),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 41/74 (55%), Positives = 47/74 (63%), Gaps = 6/74 (8%)
 Frame = +1

Query  1044   NRNLQAEYDRLKQQHEHKGLSP--LPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEA  1101
               R LQ E  RLK QHE    +P  +    E  P      R+ EL+AEA++LRQHK RLE 
Sbjct  50437  GRILQGELRRLKWQHEEAAEAPTLVEGSAEATPDH----RNEELLAEARILRQHKSRLET  50604

Query  1102   RMQILEDHNKQLES  1115
              RMQILEDHNKQLES
Sbjct  50605  RMQILEDHNKQLES  50646


 Score = 65.9 bits (159),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 0/39 (0%)
 Frame = +1

Query  865    RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPT  903
              RYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TP 
Sbjct  44440  RYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPV  44556


 Score = 51.6 bits (122),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
 Frame = +2

Query  598    QGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRF  643
              +G WE  +      +  +H+ QTTCWDHPKMTELYQ+L +  N RF
Sbjct  38150  KGSWECDVGAIDA-FVCSHQAQTTCWDHPKMTELYQTLGE--NARF  38278


 Score = 48.5 bits (114),  Expect = 0.023, Method: Compositional matrix adjust.
 Identities = 21/24 (87%), Positives = 24/24 (100%), Gaps = 0/24 (0%)
 Frame = +2

Query  636    ADLNNVRFSAYRTAMKLRRLQKAL  659
              ADLNN++FSAYRTAMKLRR+QKAL
Sbjct  39608  ADLNNIKFSAYRTAMKLRRVQKAL  39679


 Score = 47.0 bits (110),  Expect = 0.059, Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 0/56 (0%)
 Frame = +3

Query  333    SLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVH  388
              S+   + LEA SD   +L L L+E++ WL  KD+ELS Q P+ GD   VQ++ + H
Sbjct  31251  SVTCSARLEAFSDLSGKLQLPLREIIDWLSQKDEELSAQLPLQGDVALVQQEKETH  31418


 Score = 45.8 bits (107),  Expect = 0.17, Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 0/46 (0%)
 Frame = +1

Query  524    EIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQV  569
              E +P+K+ V  VNDLA QL    + LS  N   LE +N RWK LQV
Sbjct  35227  EFSPVKDGVKLVNDLAHQLAISDVHLSMENSRALEQINIRWKQLQV  35364


 Score = 45.4 bits (106),  Expect = 0.21, Method: Compositional matrix adjust.
 Identities = 18/27 (66%), Positives = 24/27 (88%), Gaps = 0/27 (0%)
 Frame = +2

Query  569    VAVEDRVRQLHEAHRDFGPASQHFLST  595
              V+V +R++QL +AHRDFGP SQHFLS+
Sbjct  35813  VSVAERLKQLQDAHRDFGPGSQHFLSS  35893


 Score = 42.0 bits (97),  Expect = 2.0, Method: Compositional matrix adjust.
 Identities = 18/20 (90%), Positives = 18/20 (90%), Gaps = 0/20 (0%)
 Frame = +1

Query  595    TSVQGPWERAISPNKVPYYI  614
               SVQ PWERAISPNKVPYYI
Sbjct  37810  ASVQVPWERAISPNKVPYYI  37869


 Score = 41.2 bits (95),  Expect = 3.3, Method: Compositional matrix adjust.
 Identities = 18/22 (81%), Positives = 19/22 (86%), Gaps = 0/22 (0%)
 Frame = +1

Query  949    PASSPQLSHDDTHSRIEHYASR  970
              PASSP L H DTHSRIEH+ASR
Sbjct  47419  PASSPMLPHADTHSRIEHFASR  47484


>ref|XM_002221736.1| Branchiostoma floridae hypothetical protein (BRAFLDRAFT_123699) 
mRNA, complete cds
Length=6462

 Score = 90.1 bits (222),  Expect = 6e-15, Method: Compositional matrix adjust.
 Identities = 120/558 (21%), Positives = 231/558 (41%), Gaps = 39/558 (6%)
 Frame = +1

Query  12    LADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELI  71
             +  F  A  EL  WL   +  +  ++ + GD + I   + K K    D+   +  ++ + 
Sbjct  3289  MGQFTAAIDELLTWLKHTEASLDEEKPVAGDTKLIEIELAKHKVLQNDILAHQSSVDSVH  3468

Query  72    TAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEE  131
              A + +    +  EA+ I  D++  +  +W +V +   +++  L  +L +S  +    EE
Sbjct  3469  QAGKRIIQAENKAEAKAI-QDKLAALDKRWSDVLQKAADKQTNLEALLNESQGFHVVLEE  3645

Query  132   AEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDY  191
                 +G+   KL + K      +  ++++    +L + +      +D A     +L+   
Sbjct  3646  LLHWVGETETKLSTTKPTGGLPETAKEQVDRHMELQQQIDDKAEEIDAALFEGQELVAKC  3825

Query  192   SADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT  251
                    V      +   W  +    +ER++ LE+  +  Q F   L+ F++WLT AE T
Sbjct  3826  DKTAASNVEHGLNKLATQWEGLLAHAAERKSKLEDALKQAQDFHDSLQSFISWLTNAEKT  4005

Query  252   ANVLQDATRKERLLEDSKGVKELMKQWQD----LQGEIEAHTDVYHNLDENSQKILRSLE  307
              N L+ A+           V E + Q  D     +  I  H +    LD+     L+   
Sbjct  4006  LNNLKPASM----------VMETLSQQIDDHKAFEKNIADHRETMLQLDKMGTH-LKYFS  4152

Query  308   GSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDE  367
                D +L++  L ++  +W  +  +      HLE +  + ++ + S ++L+ WL   ++ 
Sbjct  4153  QKQDVILIKNLLISVQGRWERILSRYGERSRHLEDALKRARQFNDSWKKLMDWLDEAENH  4332

Query  368   LSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQE  427
             L  +APIG D   ++ Q    + F+R L  K+P+  ST++T R    +   +  +KL ++
Sbjct  4333  LDSEAPIGNDPDKIKAQLLKFKEFQRALAAKQPLYDSTMKTGRSLKDKGTPQDGQKLDEK  4512

Query  428   PRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELD  487
               EL                      +W+ +   S D Q  ++E L    +  +A   L 
Sbjct  4513  LTEL--------------------RDKWDLICAKSVDRQHTLEEALLFSGQFADALQALL  4632

Query  488   LKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLG  546
               L + E       PV GD  ID++   +   K  + E+A    +V  V   AR++    
Sbjct  4633  DWLYKTEPNLAEDLPVHGD--IDTVLTLIGNHKVFQRELASRTSSVQTVRKQAREILNSS  4806

Query  547   IQLSPYNLSTLEDLNTRW  564
              + +      LEDLN +W
Sbjct  4807  TEDTSELRRQLEDLNIKW  4860


 Score = 69.3 bits (168),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 112/567 (19%), Positives = 233/567 (41%), Gaps = 47/567 (8%)
 Frame = +1

Query  25    WLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSNQ  84
             WL   +  + +   +  D   I + I   K    +++ R+  +E +    + L  K S+ 
Sbjct  2998  WLGTAEARLATFPPIGADPSTIKKQIDNLKEFKTEVDPRQVAVEAMNNQGEQLMKKVSSD  3177

Query  85    EARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLE  144
             EAR  I + +  +  +W+ +Q  + +R+ +L   L    Q+  A +E    L    A L+
Sbjct  3178  EARLSIQEPLHDMNKRWEGLQRSIVDRQHKLEAALLKMGQFTAAIDELLTWLKHTEASLD  3357

Query  145   SWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITE  204
               K        I+ ++ + K L  D+   Q++VD  +    ++++  +  + + +     
Sbjct  3358  EEKPVAGDTKLIEIELAKHKVLQNDILAHQSSVDSVHQAGKRIIQAENKAEAKAIQDKLA  3537

Query  205   NINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERL  264
              ++  W  + ++ ++++  LE      Q F + LE+ L W+ E ET  +  +        
Sbjct  3538  ALDKRWSDVLQKAADKQTNLEALLNESQGFHVVLEELLHWVGETETKLSTTK--------  3693

Query  265   LEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSL-EGSD--------DAVLL  315
                + G+ E  K+      +++ H ++   +D+ +++I  +L EG +         A  +
Sbjct  3694  --PTGGLPETAKE------QVDRHMELQQQIDDKAEEIDAALFEGQELVAKCDKTAASNV  3849

Query  316   QRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIG  375
             +  L+ +  +W  L   +   +S LE +  Q +  H SLQ  + WL   +  L+   P  
Sbjct  3850  EHGLNKLATQWEGLLAHAAERKSKLEDALKQAQDFHDSLQSFISWLTNAEKTLNNLKPAS  4029

Query  376   GDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEE  435
                  + +Q D H+AF++ +      ++                 L+K+    +      
Sbjct  4030  MVMETLSQQIDDHKAFEKNIADHRETMLQ----------------LDKMGTHLKYFS---  4152

Query  436   RAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEV  495
             + Q+V  L++     V   WE++     +  R +++ L+R ++  ++  +L   L +AE 
Sbjct  4153  QKQDVI-LIKNLLISVQGRWERILSRYGERSRHLEDALKRARQFNDSWKKLMDWLDEAEN  4329

Query  496   IKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLS  555
                S  P+G+   D ++  L K K  +  +A  +          R L   G       L 
Sbjct  4330  HLDSEAPIGN-DPDKIKAQLLKFKEFQRALAAKQPLYDSTMKTGRSLKDKGTPQDGQKLD  4506

Query  556   -TLEDLNTRWKLLQVAVEDRVRQLHEA  581
               L +L  +W L+     DR   L EA
Sbjct  4507  EKLTELRDKWDLICAKSVDRQHTLEEA  4587


 Score = 62.8 bits (151),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 101/556 (18%), Positives = 238/556 (42%), Gaps = 34/556 (6%)
 Frame = +1

Query  46    INEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSNQE---ARTIITDRIERIQNQWD  102
             I E I + +A   +LE+  P +E L     +L  K++  +   +   I D+++++   W+
Sbjct  2395  IKEQISENEALRSELEKHLPAIETLRGKGDDLIGKSAGVDKDPSAKAIQDKLDQMNFLWE  2574

Query  103   EVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITE  162
             ++    + R Q + E    + ++ E       VL + +  ++  +E     D ++++   
Sbjct  2575  DIVSRSEERDQAMLETHDTAERFWEELGNVLNVLKETQDSIKELEEPAIQPDIVREQQEV  2754

Query  163   TKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREA  222
              + + +++   Q +++    L   L       D   V    E++NA+W +++    ERE 
Sbjct  2755  LQAIKEEMESTQDDIETVRQLGEDLTSLCGEPDKPVVSKNVEDLNATWDTLNASWEEREE  2934

Query  223   ALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQ  282
              LEE  R+  Q+   L+  L WL  AE              +  D   +K+ +   ++ +
Sbjct  2935  VLEEAMRVALQYQDALQALLVWLGTAEARLATFPP------IGADPSTIKKQIDNLKEFK  3096

Query  283   GEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEA  342
              E++        ++   +++++ +   +  + +Q  L +MN +W  L++  ++ +  LEA
Sbjct  3097  TEVDPRQVAVEAMNNQGEQLMKKVSSDEARLSIQEPLHDMNKRWEGLQRSIVDRQHKLEA  3276

Query  343   SSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVI  402
             +  +  +   ++ ELL WL+  +  L  + P+ GD   ++ +   H+  + ++   +  +
Sbjct  3277  ALLKMGQFTAAIDELLTWLKHTEASLDEEKPVAGDTKLIEIELAKHKVLQNDILAHQSSV  3456

Query  403   MSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHS  462
              S  +  +                  R +  E +A+   + ++ +   ++  W  +   +
Sbjct  3457  DSVHQAGK------------------RIIQAENKAE--AKAIQDKLAALDKRWSDVLQKA  3576

Query  463   ADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALR  522
             AD Q  ++  L   Q      +EL   + + E    + +P G  L ++ ++ +++   L+
Sbjct  3577  ADKQTNLEALLNESQGFHVVLEELLHWVGETETKLSTTKPTGG-LPETAKEQVDRHMELQ  3753

Query  523   GEIAPLKENVSHVNDLARQLTTLGIQLSPYNLS-TLEDLNTRWKLLQVAVEDRVRQLHEA  581
              +I    E +       ++L     + +  N+   L  L T+W+ L     +R  +L +A
Sbjct  3754  QQIDDKAEEIDAALFEGQELVAKCDKTAASNVEHGLNKLATQWEGLLAHAAERKSKLEDA  3933

Query  582   HR---DFGPASQHFLS  594
              +   DF  + Q F+S
Sbjct  3934  LKQAQDFHDSLQSFIS  3981


 Score = 59.7 bits (143),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 88/399 (22%), Positives = 170/399 (42%), Gaps = 32/399 (8%)
 Frame = +1

Query  15    FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
             FN +W +L DWL   +  + S+  +  D + I   ++K K   + L  ++P  +  +   
Sbjct  4279  FNDSWKKLMDWLDEAENHLDSEAPIGNDPDKIKAQLLKFKEFQRALAAKQPLYDSTMKTG  4458

Query  75    QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
             ++LK+K + Q+ + +  +++  ++++WD +     +R+  L E L  S Q+ +A +    
Sbjct  4459  RSLKDKGTPQDGQKL-DEKLTELRDKWDLICAKSVDRQHTLEEALLFSGQFADALQALLD  4635

Query  135   VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
              L +    L         +D +   I   K   ++L    ++V      A ++L + S +
Sbjct  4636  WLYKTEPNLAEDLPVHGDIDTVLTLIGNHKVFQRELASRTSSVQTVRKQAREIL-NSSTE  4812

Query  195   DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAE-----  249
             DT ++    E++N  W +  +    ++  L++  +  ++F   +   L WL EAE     
Sbjct  4813  DTSELRRQLEDLNIKWENASRLSVVKQQRLDQAMKQAEEFHTSVHCLLEWLAEAEHVLRF  4992

Query  250   -TTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEG  308
              +   V  +    E L +  K  KE+  Q + LQ  +        ++ E   KI      
Sbjct  4993  QSQIPVDDEDMLMESLTQQEKFEKEMADQQRKLQEAM--------DMGEAILKICHP---  5139

Query  309   SDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW-------L  361
              D    ++  L  +  +W E+   +   R+ LE +    K     L  L  W       L
Sbjct  5140  -DAITTVKHWLTIIMARWEEVTSWASQHRARLEDALKVLKANEELLDRLTAWVEGAEHTL  5316

Query  362   QLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEP  400
             Q  DDE     P+  +   VQK  + H+ F+ E+ TK+P
Sbjct  5317  QTLDDE-----PLPDNMEDVQKLMEEHQMFQNEMSTKQP  5418


 Score = 57.8 bits (138),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 76/350 (21%), Positives = 154/350 (44%), Gaps = 13/350 (3%)
 Frame = +1

Query  14    DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITA  73
             DF+ +      WL+  ++ + + +     +E +++ I   KA  +++   R  + +L   
Sbjct  3949  DFHDSLQSFISWLTNAEKTLNNLKPASMVMETLSQQIDDHKAFEKNIADHRETMLQLDKM  4128

Query  74    AQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAE  133
               +LK  +  Q+   +I + +  +Q +W+ +      R + L + LK + Q+ ++ ++  
Sbjct  4129  GTHLKYFSQKQDV-ILIKNLLISVQGRWERILSRYGERSRHLEDALKRARQFNDSWKKLM  4305

Query  134   QVLGQARAKLESWKEGPYT--VDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDY  191
               L +A   L+S  E P     D I+ ++ + K+  + L   Q   D        L    
Sbjct  4306  DWLDEAENHLDS--EAPIGNDPDKIKAQLLKFKEFQRALAAKQPLYDSTMKTGRSLKDKG  4479

Query  192   SADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT  251
             +  D +K+      +   W  I  +  +R+  LEE      QF   L+  L WL + E  
Sbjct  4480  TPQDGQKLDEKLTELRDKWDLICAKSVDRQHTLEEALLFSGQFADALQALLDWLYKTE--  4653

Query  252   ANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDD  311
              N+ +D      +  D   V  L+   +  Q E+ + T     + + +++IL S   ++D
Sbjct  4654  PNLAEDLP----VHGDIDTVLTLIGNHKVFQRELASRTSSVQTVRKQAREILNS--STED  4815

Query  312   AVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWL  361
                L+R+L+++N KW    + S+  +  L+ +  Q +  H S+  LL WL
Sbjct  4816  TSELRRQLEDLNIKWENASRLSVVKQQRLDQAMKQAEEFHTSVHCLLEWL  4965


 Score = 45.4 bits (106),  Expect = 0.20, Method: Compositional matrix adjust.
 Identities = 65/308 (21%), Positives = 137/308 (44%), Gaps = 21/308 (6%)
 Frame = +1

Query  15    FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
             F  A   L DWL   +  +     + GD++ +  +I   K   ++L  R   ++ +   A
Sbjct  4606  FADALQALLDWLYKTEPNLAEDLPVHGDIDTVLTLIGNHKVFQRELASRTSSVQTVRKQA  4785

Query  75    QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQW-------LE  127
             + + N  S+ E  + +  ++E +  +W+        ++Q+L++ +K + ++       LE
Sbjct  4786  REILN--SSTEDTSELRRQLEDLNIKWENASRLSVVKQQRLDQAMKQAEEFHTSVHCLLE  4959

Query  128   AKEEAEQVLG-QARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALK  186
                EAE VL  Q++  ++         D + + +T+ ++  K++   Q  +  A D+   
Sbjct  4960  WLAEAEHVLRFQSQIPVDD-------EDMLMESLTQQEKFEKEMADQQRKLQEAMDMGEA  5118

Query  187   LLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
             +L+    D    V      I A W  +    S+  A LE+  ++L+     L++  AW+ 
Sbjct  5119  ILKICHPDAITTVKHWLTIIMARWEEVTSWASQHRARLEDALKVLKANEELLDRLTAWVE  5298

Query  247   EAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSL  306
              AE T   L D    E L ++ + V++LM++ Q  Q E+      Y  + +  ++ + ++
Sbjct  5299  GAEHTLQTLDD----EPLPDNMEDVQKLMEEHQMFQNEMSTKQPEYDRITKGHKRRISTV  5466

Query  307   EGSDDAVL  314
             + S    L
Sbjct  5467  DHSPGGFL  5490


>ref|XM_001505526.1| PREDICTED: Ornithorhynchus anatinus similar to dystonin (LOC100073893), 
mRNA
Length=13662

 Score = 89.7 bits (221),  Expect = 9e-15, Method: Compositional matrix adjust.
 Identities = 144/603 (23%), Positives = 261/603 (43%), Gaps = 88/603 (14%)
 Frame = +1

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  10039  ALGQFQHALDELLTWLTHTEDLLNEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  10218

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEML----------K  120
                A  +L   ++ +EA  +  +++E +  +W  V E  + R+QQL+  L          +
Sbjct  10219  KKAGTDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQRKQQLDTALLQAQGFHGEIE  10395

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKE--GPYTV-DAIQKKITETKQ--LAK  168
              D  QWL   E    A + +G     AR +L S  E    + V + I K++ E  Q  LA+
Sbjct  10396  DLHQWLTDTERHLLASKPVGGLPETAREQLNSHLELCAAFEVKEEIYKRLMEKGQQMLAR  10575

Query  169    DLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETH  228
                   +TNVD          +D +            N+   W S+  ++SER+  LEE  
Sbjct  10576  CPESAETNVD----------QDIN------------NLKEKWESVQTKLSERKTKLEEAL  10689

Query  229    RLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAH  288
               L  +F   L+ F+ WLT+AE T  +   A+R   +L+    V   + + +    E+ +H
Sbjct  10690  NLAMEFHNSLQDFINWLTQAEQTLTI---ASRPSLILD---TVLFQIDEHKVFATEVNSH  10851

Query  289    TDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWK  348
               D    LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K
Sbjct  10852  RDQVIELDKTGTH-LKYFSQKQDVVLIKNLLISVQNRWEKVVQRLVERGRALDDARKRAK  11028

Query  349    RLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLET  408
              + H +  +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T
Sbjct  11029  QFHEAWNKLMEWLEESEKSLDSELEIANDPDKIKAQLTQHKEFQKSLGAKHSVYDTTNRT  11208

Query  409    VRIF-----LTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSA  463
               R       LT+  L+ L+ +  E R+                       +W+ +   S 
Sbjct  11209  GRSLKEKASLTDDNLK-LDDMLSELRD-----------------------KWDTICGKSV  11316

Query  464    DWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALR  522
              + Q K++E L    +  +A   L   L + E      QPV GD  ID + + ++  K  +
Sbjct  11317  ERQNKLEEALLFSGQFTDALQALIDWLYKIEPQLAEDQPVHGD--IDLVMNLIDNHKVFQ  11490

Query  523    GEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKL---LQVAVEDRVRQ-L  578
               E+     +V  +   AR+L       S +    +++L+TRW+    L V+ + R+ + L
Sbjct  11491  KELGKRTSSVQALKRSARELVEGSRDDSSWVKVQMQELSTRWETVCALSVSKQTRLEEAL  11670

Query  579    HEA  581
              H+A
Sbjct  11671  HQA  11679


 Score = 63.9 bits (154),  Expect = 6e-07, Method: Compositional matrix adjust.
 Identities = 88/389 (22%), Positives = 175/389 (44%), Gaps = 16/389 (4%)
 Frame = +1

Query  14     DFNRAWTELTDWLSLLDQV--IKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELI  71
              +F+ +  +  +WL+  +Q   I S+  ++  L+ +   I + K    ++   R Q+ EL 
Sbjct  10702  EFHNSLQDFINWLTQAEQTLTIASRPSLI--LDTVLFQIDEHKVFATEVNSHRDQVIELD  10875

Query  72     TAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEE  131
                  +LK  +  Q+   +I + +  +QN+W++V + L  R + L++  K + Q+ EA  +
Sbjct  10876  KTGTHLKYFSQKQDV-VLIKNLLISVQNRWEKVVQRLVERGRALDDARKRAKQFHEAWNK  11052

Query  132    AEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDY  191
                + L ++   L+S  E     D I+ ++T+ K+  K L    +  D  N     L    
Sbjct  11053  LMEWLEESEKSLDSELEIANDPDKIKAQLTQHKEFQKSLGAKHSVYDTTNRTGRSLKEKA  11232

Query  192    S-ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAET  250
              S  DD  K+  +   +   W +I  +  ER+  LEE      QF   L+  + WL + E 
Sbjct  11233  SLTDDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALIDWLYKIEP  11412

Query  251    TANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGS-  309
                         + +  D   V  L+   +  Q E+   T     L  ++++++   EGS 
Sbjct  11413  ------QLAEDQPVHGDIDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELV---EGSR  11565

Query  310    DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELS  369
              DD+  ++ ++  ++ +W  +   S++ ++ LE +  Q +  H  +  LL WL   +  L 
Sbjct  11566  DDSSWVKVQMQELSTRWETVCALSVSKQTRLEEALHQAEEFHSVVHVLLEWLAEAEQTLR  11745

Query  370    RQAPIGGDFPAVQKQNDVHRAFKRELKTK  398
                  +  D  A++   D H+ F ++L+ K
Sbjct  11746  FHGLLPDDEEALRTLIDQHKEFMKKLEEK  11832


 Score = 62.4 bits (150),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 35/206 (16%)
 Frame = +1

Query  204   ENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAET-TANV--------  254
             E++N  W++++K+V++R A L+E      +F   +E  L+WL + E   AN         
Sbjct  7006  EDVNTRWKTLNKKVAQRAAQLQEALLHCGRFQDAMESLLSWLVDTEDLVANQKPPSAEFK  7185

Query  255   -----LQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGS  309
                  +Q+    +RLL+D K   E++K+    +GE                KI  + E +
Sbjct  7186  VVKAQIQEQKLLQRLLDDRKPTIEVIKR----EGE----------------KIAETAEPA  7305

Query  310   DDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELS  369
             D   +L ++L  ++ +W  L  K+      LEA S   ++ H +L+ L+ WL + + +L+
Sbjct  7306  DKVKIL-KQLSLLDSRWDALLNKAETRNRQLEAISVVAQQFHETLEPLVEWLTITEKKLA  7482

Query  370   RQAPIGGDFPAVQKQNDVHRAFKREL  395
                PIG   P +Q+Q   H+A + ++
Sbjct  7483  NSEPIGTQTPKLQEQIAQHKALEDDI  7560


 Score = 58.9 bits (141),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 119/586 (20%), Positives = 245/586 (41%), Gaps = 84/586 (14%)
 Frame = +1

Query  41     GDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNL---KNKTSNQEARTIITDRIERI  97
               ++E I E I + K  + DLE+ +P  E L    + +      T+   +   + D+++++
Sbjct  9133   AEVEKIKEQISENKNVLVDLEKLQPVYETLKQRGEEMIARSGGTNKDISAKAVQDKLDQM  9312

Query  98     QNQWDEVQEHLQNRRQQLNEMLK-------DSTQWLEAKEEAEQVLGQARAKLESWKEGP  150
                 W+++Q   + R  +L ++++       D    +   ++ +  + +    LES    P
Sbjct  9313   VLAWEDIQNLAEEREAKLLDVMELAEKFWCDHMSLVVTTKDTQDFIRE----LESPGVDP  9480

Query  151    YTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASW  210
                V   Q+     + + +++   Q  +D+  +L  +L+      D   V+   + +N++W
Sbjct  9481   SVVKQQQEA---AEAIREEIDGLQEELDIVINLGSELITACGEPDKPIVNKSIDELNSAW  9651

Query  211    RSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKG  270
               S++K   ER   LEE  +   Q+   L+    W+  A    + +        +  D + 
Sbjct  9652   DSLNKTWKERIDKLEEAMQAAVQYQDGLQAIFDWVDIAGGKLSSMSP------IGTDLET  9813

Query  271    VKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELR  330
              VK+ +++ +  + E          L+  ++ +L+ +    D   +Q  L  +   W  L 
Sbjct  9814   VKQQIEELKQFKAEAYQQQIEMERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLD  9993

Query  331    KKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRA  390
              +K +N +  LE +     +   +L ELL WL   +D L+ Q P+GGD  A++ +   H  
Sbjct  9994   EKIVNRQHKLEGALLALGQFQHALDELLTWLTHTEDLLNEQKPVGGDPKAIEIELAKHHV  10173

Query  391    FKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQA-E  449
               + ++   +    ST+E V+                           +  T L+   A E
Sbjct  10174  LQNDVLAHQ----STVEAVK---------------------------KAGTDLIESSAGE  10260

Query  450    EVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLID  509
              E +    KL + +  WQ  +++T +R Q       +LD  L QA+   G  + +   L D
Sbjct  10261  EASNLQNKLEVLNQRWQNVLEKTEQRKQ-------QLDTALLQAQGFHGEIEDLHQWLTD  10419

Query  510    SLQDHLEKVKALRGEIAPLKENV-SHV---------NDLARQLTTLGIQL---SPYNLST  556
              + + HL   K + G     +E + SH+          ++ ++L   G Q+    P +  T
Sbjct  10420  T-ERHLLASKPVGGLPETAREQLNSHLELCAAFEVKEEIYKRLMEKGQQMLARCPESAET  10596

Query  557    -----LEDLNTRWKLLQVAVEDRVRQLHEA---HRDFGPASQHFLS  594
                   + +L  +W+ +Q  + +R  +L EA     +F  + Q F++
Sbjct  10597  NVDQDINNLKEKWESVQTKLSERKTKLEEALNLAMEFHNSLQDFIN  10734


 Score = 56.2 bits (134),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 124/561 (22%), Positives = 242/561 (43%), Gaps = 71/561 (12%)
 Frame = +1

Query  43    LEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWD  102
             LE +  +I  QK   + L  +    ++++   +NL  KT   E +  +  +I  I+  WD
Sbjct  5542  LECLQSLIKDQKEFQKSLTSQCDSYKKIVAEGENLLLKTQGAE-KADLQVQINTIKTNWD  5718

Query  103   EVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVD--AIQKKI  160
              + + +  R+++L + L+ + ++ E  E  +  + +    L   K     +D    +  I
Sbjct  5719  GLNKQVVERQEELKDCLEKALKYKEHVENLQPWIDKCHNNLAEIK---VCIDPAGTENSI  5889

Query  161   TETKQLAKDLRQWQTNVDVANDLALKLL----------RDYSADDTRKVHMITENINA--  208
              + K L K++ Q    V++ N+ A  LL          R+ +    ++V  +TE + +  
Sbjct  5890  EKVKALQKEMDQHFGMVELLNNAANSLLNASEIDQEAIREGNKSLNQRVDTLTEQLQSKK  6069

Query  209   -SWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLED  267
              S  ++ K++ E + A +ET RLL+     LE + +   +A +  ++    ++++ L   
Sbjct  6070  QSLENMSKKLKEFQEASKETQRLLKGAKEQLEVYDSLGPQACSNKHLTIMQSQQKSL---  6240

Query  268   SKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWS  327
                        Q L+ ++E    V       +Q+++     S+    L  + +++  +  
Sbjct  6241  -----------QTLKHQVEMAKKV-------AQELVVEASDSEGTADLLIQAESLEREHR  6366

Query  328   ELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDV  387
             ++ ++  +  S LEA          S++E+       DDEL   AP+G +   +Q+Q + 
Sbjct  6367  DVSQQVEDKCSFLEAKLQGIGHFQNSIREMFSQFAEFDDELDSMAPVGREGDTLQRQRED  6546

Query  388   HRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQ  447
              + F   LK  + +I+S     +            K+     E  P+         +++ 
Sbjct  6547  IKDF---LKKLQDLIVSNGNANKTC----------KMMLASEEASPDLVG------IKRD  6669

Query  448   AEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLL  507
              E ++ +  KL   +   + +++ T+ RL+E  E   E    L++AE  + S  PVG + 
Sbjct  6670  LEALSKQCNKLLDRAKVREEQVESTVSRLEEFYEKLKEFSGCLQRAEENEESQGPVG-ME  6846

Query  508   IDSLQDHLEKVKAL-RGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLST------LEDL  560
              +++   L   K   + EI  L+     VN L + L    IQ +  + ST      LED+
Sbjct  6847  TETINQQLNIFKMFQKEEIDSLQAKQQEVNWLGQGL----IQSAAKSTSTERLEHELEDV  7014

Query  561   NTRWKLLQVAVEDRVRQLHEA  581
             NTRWK L   V  R  QL EA
Sbjct  7015  NTRWKTLNKKVAQRAAQLQEA  7077


 Score = 47.4 bits (111),  Expect = 0.049, Method: Compositional matrix adjust.
 Identities = 105/498 (21%), Positives = 201/498 (40%), Gaps = 59/498 (11%)
 Frame = +1

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW +L +WL   ++ + S+  +  D + I   + + K   + L  +    +      
Sbjct  11032  FHEAWNKLMEWLEESEKSLDSELEIANDPDKIKAQLTQHKEFQKSLGAKHSVYDTTNRTG  11211

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              ++LK K S  +    + D +  ++++WD +      R+ +L E L  S Q+ +A +    
Sbjct  11212  RSLKEKASLTDDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALID  11391

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   I   K   K+L +  ++V      A +L+ + S D
Sbjct  11392  WLYKIEPQLAEDQPVHGDIDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELV-EGSRD  11568

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA--  252
              D+  V +  + ++  W ++      ++  LEE     ++F   +   L WL EAE T   
Sbjct  11569  DSSWVKVQMQELSTRWETVCALSVSKQTRLEEALHQAEEFHSVVHVLLEWLAEAEQTLRF  11748

Query  253    -NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDD  311
                +L D     R L D    KE MK+ ++ + E+   T                  G  +
Sbjct  11749  HGLLPDDEEALRTLIDQH--KEFMKKLEEKRAELNKAT------------------GMGE  11868

Query  312    AVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLS---------------LQE  356
              AVL     D++    + ++     IR+  E     W + H                 L+ 
Sbjct  11869  AVLAICHPDSI----TTIKHWITIIRARFEEVL-AWAKQHQQRLAGALAGLIAKQELLEA  12033

Query  357    LLVWLQLKDDELSRQ--APIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETV-RIFL  413
              LL WLQ  +  LS +    I  +   V+     H+ F  E+  K+P +    +T  R   
Sbjct  12034  LLTWLQWAETTLSDKDKETIPQEIEEVKALIAEHQTFMEEMTRKQPDVDKVTKTYKRKAA  12213

Query  414    TEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQ-------  466
                 P++    +  + R     +R+ +          ++ T+  ++NL  + WQ       
Sbjct  12214  DPSPIQSHIPVLDKGR--TGRKRSPSSAVYPSGSQTQIETKNPRVNLLVSKWQQVWLLAL  12387

Query  467    ---RKIDETLERLQELQE  481
                 RK+++ L+RL+EL+E
Sbjct  12388  ERRRKLNDALDRLEELKE  12441


 Score = 40.4 bits (93),  Expect = 6.9, Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 9/172 (5%)
 Frame = +1

Query  134   QVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDY--  191
             Q L Q      SW   P   +A++ +  + K    +L+Q    V    D   +LL     
Sbjct  4492  QWLQQMDKNTTSWDAPPTDNEAVRAQFEQNKTFEAELKQNVNKVQELKDKLSELLEQNPD  4671

Query  192   SADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT  251
             S +  +  HM+ E I++ W+ +++  ++R+  LEE+   L QF     +   WL E E  
Sbjct  4672  SPEAPKWKHML-EEIDSKWKELNQLTADRQQKLEESSNNLTQFQTVEAQLKQWLVEKELM  4848

Query  252   ANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKIL  303
             A+VL   +    +L   K      +Q Q L  E +     Y  L    Q IL
Sbjct  4849  ASVLGPLSIDPNMLNTQK------QQVQILLNEFDTRKPQYEQLKTTGQSIL  4986


>ref|XM_002205053.1| Branchiostoma floridae hypothetical protein (BRAFLDRAFT_118483) 
mRNA, complete cds
Length=4272

 Score = 89.4 bits (220),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 120/559 (21%), Positives = 232/559 (41%), Gaps = 39/559 (6%)
 Frame = +1

Query  12    LADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELI  71
             +  F  A  EL  WL   +  +  ++ + GD + I   + K K    D+   +  ++ + 
Sbjct  976   MGQFTAAIDELLTWLKHTEASLDEEKPVAGDTKLIEIELAKHKVLQNDILAHQSSVDSVH  1155

Query  72    TAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEE  131
              A + +    +  EA+ I  D++  +  +W +V +   +++  L  +L +S  +    EE
Sbjct  1156  QAGKRIIQAENKAEAKAI-QDKLAALDKRWSDVLQKAADKQTNLEALLNESQGFHVVLEE  1332

Query  132   AEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDY  191
                 +G+   KL + K      +  ++++    +L + +      +D A     +L+   
Sbjct  1333  LLHWVGETETKLSTTKPTGGLPETAKEQVDRHMELQQQIDDKAEEIDAALFEGQELVAKC  1512

Query  192   SADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT  251
                    V      +   W  +    +ER++ LE+  +  Q F   L+ F++WLT AE T
Sbjct  1513  DKTAASNVEHGLNKLATQWEGLLAHAAERKSKLEDALKQAQDFHDSLQSFISWLTNAEKT  1692

Query  252   ANVLQDATRKERLLEDSKGVKELMKQWQD----LQGEIEAHTDVYHNLDENSQKILRSLE  307
              N L+ A+           V E + Q  D     +  I  H +    LD+     L+   
Sbjct  1693  LNNLKPASM----------VMETLSQQIDDHKAFEKNIADHRETMLQLDKMGTH-LKYFS  1839

Query  308   GSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDE  367
                D +L++  L ++  +W  +  +      HLE +  + ++ + S ++L+ WL   ++ 
Sbjct  1840  QKQDVILIKNLLISVQGRWERILSRYGERSRHLEDALKRARQFNDSWKKLMDWLDEAENH  2019

Query  368   LSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQE  427
             L  +APIG D   ++ Q    + F+R L  K+P+  ST++T R    +   +  +KL ++
Sbjct  2020  LDSEAPIGNDPDKIKAQLLKFKEFQRALAAKQPLYDSTMKTGRSLKDKGTPQDGQKLDEK  2199

Query  428   PRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELD  487
               EL                      +W+ +   S D Q  ++E L    +  +A   L 
Sbjct  2200  LTEL--------------------RDKWDLICAKSVDRQHTLEEALLFSGQFADALQALL  2319

Query  488   LKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLG  546
               L + E       PV GD  ID++   +   K  + E+A    +V  V   AR++    
Sbjct  2320  DWLYKTEPNLAEDLPVHGD--IDTVLTLIGNHKVFQRELASRTSSVQTVRKQAREILNSS  2493

Query  547   IQLSPYNLSTLEDLNTRWK  565
              + +      LEDLN +W+
Sbjct  2494  TEDTSELQRQLEDLNIKWE  2550


 Score = 67.4 bits (163),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 112/567 (19%), Positives = 232/567 (40%), Gaps = 47/567 (8%)
 Frame = +1

Query  25    WLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSNQ  84
             WL   +  + +   +  D   I + I   K    +++ R+  +E +      L  K S+ 
Sbjct  685   WLGTAEARLATFPPIGADPSTIKKQIDNLKEFKTEVDPRQVAVEAMNNQGDQLMKKVSSD  864

Query  85    EARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLE  144
             EAR  I + +  +  +W+ +Q  + +R+ +L   L    Q+  A +E    L    A L+
Sbjct  865   EARLSIQEPLHDMNKRWEGLQRSIVDRQHKLEAALLKMGQFTAAIDELLTWLKHTEASLD  1044

Query  145   SWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITE  204
               K        I+ ++ + K L  D+   Q++VD  +    ++++  +  + + +     
Sbjct  1045  EEKPVAGDTKLIEIELAKHKVLQNDILAHQSSVDSVHQAGKRIIQAENKAEAKAIQDKLA  1224

Query  205   NINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERL  264
              ++  W  + ++ ++++  LE      Q F + LE+ L W+ E ET  +  +        
Sbjct  1225  ALDKRWSDVLQKAADKQTNLEALLNESQGFHVVLEELLHWVGETETKLSTTK--------  1380

Query  265   LEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSL-EGSD--------DAVLL  315
                + G+ E  K+      +++ H ++   +D+ +++I  +L EG +         A  +
Sbjct  1381  --PTGGLPETAKE------QVDRHMELQQQIDDKAEEIDAALFEGQELVAKCDKTAASNV  1536

Query  316   QRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIG  375
             +  L+ +  +W  L   +   +S LE +  Q +  H SLQ  + WL   +  L+   P  
Sbjct  1537  EHGLNKLATQWEGLLAHAAERKSKLEDALKQAQDFHDSLQSFISWLTNAEKTLNNLKPAS  1716

Query  376   GDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEE  435
                  + +Q D H+AF++ +      ++                 L+K+    +      
Sbjct  1717  MVMETLSQQIDDHKAFEKNIADHRETMLQ----------------LDKMGTHLKYFS---  1839

Query  436   RAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEV  495
             + Q+V  L++     V   WE++     +  R +++ L+R ++  ++  +L   L +AE 
Sbjct  1840  QKQDVI-LIKNLLISVQGRWERILSRYGERSRHLEDALKRARQFNDSWKKLMDWLDEAEN  2016

Query  496   IKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLS  555
                S  P+G+   D ++  L K K  +  +A  +          R L   G       L 
Sbjct  2017  HLDSEAPIGN-DPDKIKAQLLKFKEFQRALAAKQPLYDSTMKTGRSLKDKGTPQDGQKLD  2193

Query  556   -TLEDLNTRWKLLQVAVEDRVRQLHEA  581
               L +L  +W L+     DR   L EA
Sbjct  2194  EKLTELRDKWDLICAKSVDRQHTLEEA  2274


 Score = 61.6 bits (148),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 101/556 (18%), Positives = 237/556 (42%), Gaps = 34/556 (6%)
 Frame = +1

Query  46    INEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSNQE---ARTIITDRIERIQNQWD  102
             I E I + +A   +LE+  P +E L     +L  K++  +   +   I D+++++   W+
Sbjct  82    IKEQISENEALRSELEKHLPAIETLRGKGDDLIGKSAGVDKDPSAKAIQDKLDQMNFLWE  261

Query  103   EVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITE  162
             ++    + R Q + E    + ++ E       VL + +  ++  +E     D ++++   
Sbjct  262   DIVSRSEERDQAMLETHDTAERFWEELGNVLNVLKETQDSIKELEEPAIQPDIVREQQEV  441

Query  163   TKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREA  222
              + + +++   Q +++    L   L       D   V    E++NA+W +++    ERE 
Sbjct  442   LQAIKEEMESTQDDIETVRQLGEDLTSLCGEPDKPVVSKNVEDLNATWDTLNASWEEREE  621

Query  223   ALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQ  282
              LEE  R+  Q+   L+  L WL  AE              +  D   +K+ +   ++ +
Sbjct  622   VLEEAMRVALQYQDALQALLVWLGTAEARLATFPP------IGADPSTIKKQIDNLKEFK  783

Query  283   GEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEA  342
              E++        ++    ++++ +   +  + +Q  L +MN +W  L++  ++ +  LEA
Sbjct  784   TEVDPRQVAVEAMNNQGDQLMKKVSSDEARLSIQEPLHDMNKRWEGLQRSIVDRQHKLEA  963

Query  343   SSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVI  402
             +  +  +   ++ ELL WL+  +  L  + P+ GD   ++ +   H+  + ++   +  +
Sbjct  964   ALLKMGQFTAAIDELLTWLKHTEASLDEEKPVAGDTKLIEIELAKHKVLQNDILAHQSSV  1143

Query  403   MSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHS  462
              S  +  +                  R +  E +A+   + ++ +   ++  W  +   +
Sbjct  1144  DSVHQAGK------------------RIIQAENKAE--AKAIQDKLAALDKRWSDVLQKA  1263

Query  463   ADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALR  522
             AD Q  ++  L   Q      +EL   + + E    + +P G  L ++ ++ +++   L+
Sbjct  1264  ADKQTNLEALLNESQGFHVVLEELLHWVGETETKLSTTKPTGG-LPETAKEQVDRHMELQ  1440

Query  523   GEIAPLKENVSHVNDLARQLTTLGIQLSPYNLS-TLEDLNTRWKLLQVAVEDRVRQLHEA  581
              +I    E +       ++L     + +  N+   L  L T+W+ L     +R  +L +A
Sbjct  1441  QQIDDKAEEIDAALFEGQELVAKCDKTAASNVEHGLNKLATQWEGLLAHAAERKSKLEDA  1620

Query  582   HR---DFGPASQHFLS  594
              +   DF  + Q F+S
Sbjct  1621  LKQAQDFHDSLQSFIS  1668


 Score = 59.3 bits (142),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 88/399 (22%), Positives = 170/399 (42%), Gaps = 32/399 (8%)
 Frame = +1

Query  15    FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
             FN +W +L DWL   +  + S+  +  D + I   ++K K   + L  ++P  +  +   
Sbjct  1966  FNDSWKKLMDWLDEAENHLDSEAPIGNDPDKIKAQLLKFKEFQRALAAKQPLYDSTMKTG  2145

Query  75    QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
             ++LK+K + Q+ + +  +++  ++++WD +     +R+  L E L  S Q+ +A +    
Sbjct  2146  RSLKDKGTPQDGQKL-DEKLTELRDKWDLICAKSVDRQHTLEEALLFSGQFADALQALLD  2322

Query  135   VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
              L +    L         +D +   I   K   ++L    ++V      A ++L + S +
Sbjct  2323  WLYKTEPNLAEDLPVHGDIDTVLTLIGNHKVFQRELASRTSSVQTVRKQAREIL-NSSTE  2499

Query  195   DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAE-----  249
             DT ++    E++N  W +  +    ++  L++  +  ++F   +   L WL EAE     
Sbjct  2500  DTSELQRQLEDLNIKWENASRLSVVKQQRLDQAMKQAEEFHTSVHCLLEWLAEAEHVLRF  2679

Query  250   -TTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEG  308
              +   V  +    E L +  K  KE+  Q + LQ  +        ++ E   KI      
Sbjct  2680  QSQIPVDDEDMLMESLTQQEKFEKEMADQQRKLQEAM--------DMGEAILKICHP---  2826

Query  309   SDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW-------L  361
              D    ++  L  +  +W E+   +   R+ LE +    K     L  L  W       L
Sbjct  2827  -DAITTVKHWLTIIMARWEEVTSWASQHRARLEDALKVLKANEELLDRLTAWVEGAEHTL  3003

Query  362   QLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEP  400
             Q  DDE     P+  +   VQK  + H+ F+ E+ TK+P
Sbjct  3004  QTLDDE-----PLPDNMEDVQKLMEEHQMFQNEMSTKQP  3105


 Score = 58.9 bits (141),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 81/366 (22%), Positives = 160/366 (43%), Gaps = 13/366 (3%)
 Frame = +1

Query  14    DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITA  73
             DF+ +      WL+  ++ + + +     +E +++ I   KA  +++   R  + +L   
Sbjct  1636  DFHDSLQSFISWLTNAEKTLNNLKPASMVMETLSQQIDDHKAFEKNIADHRETMLQLDKM  1815

Query  74    AQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAE  133
               +LK  +  Q+   +I + +  +Q +W+ +      R + L + LK + Q+ ++ ++  
Sbjct  1816  GTHLKYFSQKQDV-ILIKNLLISVQGRWERILSRYGERSRHLEDALKRARQFNDSWKKLM  1992

Query  134   QVLGQARAKLESWKEGPYT--VDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDY  191
               L +A   L+S  E P     D I+ ++ + K+  + L   Q   D        L    
Sbjct  1993  DWLDEAENHLDS--EAPIGNDPDKIKAQLLKFKEFQRALAAKQPLYDSTMKTGRSLKDKG  2166

Query  192   SADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT  251
             +  D +K+      +   W  I  +  +R+  LEE      QF   L+  L WL + E  
Sbjct  2167  TPQDGQKLDEKLTELRDKWDLICAKSVDRQHTLEEALLFSGQFADALQALLDWLYKTE--  2340

Query  252   ANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDD  311
              N+ +D      +  D   V  L+   +  Q E+ + T     + + +++IL S   ++D
Sbjct  2341  PNLAEDLP----VHGDIDTVLTLIGNHKVFQRELASRTSSVQTVRKQAREILNS--STED  2502

Query  312   AVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQ  371
                LQR+L+++N KW    + S+  +  L+ +  Q +  H S+  LL WL   +  L  Q
Sbjct  2503  TSELQRQLEDLNIKWENASRLSVVKQQRLDQAMKQAEEFHTSVHCLLEWLAEAEHVLRFQ  2682

Query  372   APIGGD  377
             + I  D
Sbjct  2683  SQIPVD  2700


 Score = 45.1 bits (105),  Expect = 0.24, Method: Compositional matrix adjust.
 Identities = 65/308 (21%), Positives = 137/308 (44%), Gaps = 21/308 (6%)
 Frame = +1

Query  15    FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
             F  A   L DWL   +  +     + GD++ +  +I   K   ++L  R   ++ +   A
Sbjct  2293  FADALQALLDWLYKTEPNLAEDLPVHGDIDTVLTLIGNHKVFQRELASRTSSVQTVRKQA  2472

Query  75    QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQW-------LE  127
             + + N  S+ E  + +  ++E +  +W+        ++Q+L++ +K + ++       LE
Sbjct  2473  REILN--SSTEDTSELQRQLEDLNIKWENASRLSVVKQQRLDQAMKQAEEFHTSVHCLLE  2646

Query  128   AKEEAEQVLG-QARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALK  186
                EAE VL  Q++  ++         D + + +T+ ++  K++   Q  +  A D+   
Sbjct  2647  WLAEAEHVLRFQSQIPVDD-------EDMLMESLTQQEKFEKEMADQQRKLQEAMDMGEA  2805

Query  187   LLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
             +L+    D    V      I A W  +    S+  A LE+  ++L+     L++  AW+ 
Sbjct  2806  ILKICHPDAITTVKHWLTIIMARWEEVTSWASQHRARLEDALKVLKANEELLDRLTAWVE  2985

Query  247   EAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSL  306
              AE T   L D    E L ++ + V++LM++ Q  Q E+      Y  + +  ++ + ++
Sbjct  2986  GAEHTLQTLDD----EPLPDNMEDVQKLMEEHQMFQNEMSTKQPEYDRITKGHKRRISTV  3153

Query  307   EGSDDAVL  314
             + S    L
Sbjct  3154  DHSPGGFL  3177


>ref|XM_684808.3| PREDICTED: Danio rerio similar to dystonin (LOC561403), mRNA
Length=25301

 Score = 89.0 bits (219),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 137/591 (23%), Positives = 250/591 (42%), Gaps = 73/591 (12%)
 Frame = +1

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  ++++  QR   GD + I   + K      D+   +  +E +
Sbjct  21616  ALGQFQHALDELLTWLTHTEELLGEQRKACGDPKAIEIELAKHHVLQNDVLAHKSTVEAV  21795

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEML----------K  120
                A  +L   ++ +EAR +  +++E +  +W  + E  + RRQ L+  L          +
Sbjct  21796  NRAGCDLMESSAGEEARGL-QNKLENLNQRWKNILEKTEQRRQLLDSALLQAQGFHGEIE  21972

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDA---IQKKITETKQLAKDL  170
              D  +WL+  E    A + +G     AR +L +  E   T++    I K + E  Q  + L
Sbjct  21973  DMQRWLKDSERQLLASKAVGGLPDTAREQLNTHLELCSTLEVKEEIYKHLLERGQ--QIL  22146

Query  171    RQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRL  230
                     D   +L L+ L+D                   W S+  +V ER+  LEE   +
Sbjct  22147  AMTPEGQDSTTELDLRNLQD------------------KWESVQAKVKERKVKLEEALAM  22272

Query  231    LQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTD  290
                 F   L+ F+ WLT+AE T  ++  A+    +LE    +   + + +    E+ +H D
Sbjct  22273  ATDFHNSLQDFINWLTQAEQTLTMVSPASL---ILE---TIMFQIDEHKVFVTEVNSHRD  22434

Query  291    VYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRL  350
                  LD+     L+      D VL++  L ++  +W ++ ++S+     L+ +  + K+ 
Sbjct  22435  QIMELDKTGTH-LKYFSQKQDVVLIKNLLLSVQSRWEKVVQRSVERGRLLDDARKRAKQF  22611

Query  351    HLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVR  410
              H S  +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L +K  V  +T  T R
Sbjct  22612  HESWSKLMEWLEESERALDTELEIANDPDKIKTQLTQHKEFQKALGSKHSVYDTTSRTGR  22791

Query  411    IFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKID  470
                  +  L                   Q+  + L     E+  +W+ +   S + Q K++
Sbjct  22792  ALKDKTSL-------------------QDDNQKLDHMLSELRDKWDTVCGKSVERQNKLE  22914

Query  471    ETLERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAPLK  529
              E L    +  +A   L   L + E      QPV GD  ID + + ++  K  + E+    
Sbjct  22915  EALLFSGQFTDALQALIDWLYKVEPQLAEDQPVHGD--IDLVLNLIDSHKVFQKELGKRT  23088

Query  530    ENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKL---LQVAVEDRVRQ  577
               +V  +   AR L       S +    +++L+TRW+    L V+ + R+ Q
Sbjct  23089  GSVQALKRSARDLIESSHDDSSWVKVQMQELSTRWETVCSLSVSKQTRLEQ  23241


 Score = 52.4 bits (124),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 115/588 (19%), Positives = 242/588 (41%), Gaps = 90/588 (15%)
 Frame = +1

Query  42     DLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSNQE---ARTIITDRIERIQ  98
              ++E I E I + KA   DLE+ +P  E L    + +  ++   +   +   + D+++++ 
Sbjct  20713  EVEKIREQISENKALSVDLEKLQPSYETLKQRGEEMIARSQGADKDLSAKAVQDKLDQMV  20892

Query  99     NQWDEVQEHLQNRRQQLNEML-----------------KDSTQWLEAKEEAE---QVLGQ  138
                W ++Q  L+ R  +L +++                 KD+ + L+  EE      V+ Q
Sbjct  20893  FLWTDIQALLEEREAKLLDVMDLAEKFWCDHCALIVTIKDTQELLKELEEPGVDPSVVKQ  21072

Query  139    ARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRK  198
               +  +E ++E    +D +Q+++                 +V  +L  +L+      D   
Sbjct  21073  QQESVEGFRE---EIDGLQEEL-----------------NVVQNLGAELMTACGEPDKPV  21192

Query  199    VHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDA  258
              +    + +N++W +++K   ER   LEE  +   QF   L+     +   E   + +   
Sbjct  21193  IKKSIDEVNSAWETLNKTWKERVEILEEAMQAAVQFQDSLQNMFDSVDIMEGKLDSMSPV  21372

Query  259    TRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRR  318
                      D + VK+ +++ ++ +G+          L+  +  +L+ +   DD   +   
Sbjct  21373  GT------DLETVKQQIEELKEFKGDAYQLQIEMERLNHQAGLLLKKVMDEDDRTSISEP  21534

Query  319    LDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDF  378
              ++ +   W  L KK +N +  LE +     +   +L ELL WL   ++ L  Q    GD 
Sbjct  21535  MNELKMLWENLDKKIINRQHKLEGALLALGQFQHALDELLTWLTHTEELLGEQRKACGDP  21714

Query  379    PAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQ  438
               A++ +   H   + ++   +    ST+E V          G + +         E  A 
Sbjct  21715  KAIEIELAKHHVLQNDVLAHK----STVEAVN-------RAGCDLM---------ESSAG  21834

Query  439    NVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKG  498
                 R L+ + E +N  W+ +   +   ++ +D  L + Q      +++   L+ +E    
Sbjct  21835  EEARGLQNKLENLNQRWKNILEKTEQRRQLLDSALLQAQGFHGEIEDMQRWLKDSERQLL  22014

Query  499    SWQPVG---DLLIDSLQDHLEKVKALRGEIAPLKENV-SHVNDLARQLTTLGIQLSPYNL  554
              + + VG   D   + L  HLE    L      +KE +  H+ +  +Q+    + ++P   
Sbjct  22015  ASKAVGGLPDTAREQLNTHLELCSTLE-----VKEEIYKHLLERGQQI----LAMTPEGQ  22167

Query  555    ST-----LEDLNTRWKLLQVAVEDRVRQLHEA---HRDFGPASQHFLS  594
               +     L +L  +W+ +Q  V++R  +L EA     DF  + Q F++
Sbjct  22168  DSTTELDLRNLQDKWESVQAKVKERKVKLEEALAMATDFHNSLQDFIN  22311


 Score = 46.6 bits (109),  Expect = 0.087, Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 133/322 (41%), Gaps = 10/322 (3%)
 Frame = +1

Query  12     LADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQD-LEQRRPQLEEL  70
              L +F     E T  LS  ++  +SQ  +  + E IN+ +   K   +D +E  + QL+EL
Sbjct  18331  LEEFYSKTQEFTSNLSTAERQEESQGSVGLETEVINQQLESFKVFQKDVIESLQSQLQEL  18510

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKE  130
               T  Q L        +   +   +E + ++W+ + + +  R  QL+E L    ++ +A E
Sbjct  18511  NTLGQALIQNAPKGTSTKNLDHDLEEVNSRWNTLNKKVAERSAQLHEALLHCGRFQDALE  18690

Query  131    EAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRD  190
                   L      + + K        ++ +I E K L + L   +  V++      K+   
Sbjct  18691  SLLSWLTDTEELVANQKPPSAEFKVVKAQIQEQKLLQRLLDDRKATVELIKTEGRKVTDL  18870

Query  191    YSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAET  250
                  D  K+    E +   W ++ K+   R   LE    + QQF   LE    WLT  E 
Sbjct  18871  ADTVDKEKIGREIECLGQRWDALLKKAENRHKQLENISVVAQQFHETLEPLTEWLTATEK  19050

Query  251    -TANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGS  309
                AN     T+  +L       +E + Q + L+ E+     V +      Q  LR+L   
Sbjct  19051  RLANSEPIGTQTSKL-------EEQISQHKALEEEVLGRGKVLYQAMSLGQS-LRTLGCV  19206

Query  310    DDAVLLQRRLDNMNFKWSELRK  331
              DD   +Q +L+N    + EL++
Sbjct  19207  DDKETVQVKLENTQRSFLELQE  19272


 Score = 46.6 bits (109),  Expect = 0.099, Method: Compositional matrix adjust.
 Identities = 79/405 (19%), Positives = 169/405 (41%), Gaps = 10/405 (2%)
 Frame = +1

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ +W++L +WL   ++ + ++  +  D + I   + + K   + L  +    +      
Sbjct  22609  FHESWSKLMEWLEESERALDTELEIANDPDKIKTQLTQHKEFQKALGSKHSVYDTTSRTG  22788

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              + LK+KTS Q+    +   +  ++++WD V      R+ +L E L  S Q+ +A +    
Sbjct  22789  RALKDKTSLQDDNQKLDHMLSELRDKWDTVCGKSVERQNKLEEALLFSGQFTDALQALID  22968

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   I   K   K+L +   +V      A  L+ + S D
Sbjct  22969  WLYKVEPQLAEDQPVHGDIDLVLNLIDSHKVFQKELGKRTGSVQALKRSARDLI-ESSHD  23145

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANV  254
              D+  V +  + ++  W ++      ++  LE+     ++F   +   L WL EAE     
Sbjct  23146  DSSWVKVQMQELSTRWETVCSLSVSKQTRLEQALSQAEEFHSTVHILLEWLAEAE-----  23310

Query  255    LQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVL  314
               Q       L +D + ++ L++Q ++    +E             + IL S+   D    
Sbjct  23311  -QSLRFHGALPDDEEALRALIEQHKEFMKRLEEKRLALSKATSMGEAIL-SICHPDSITT  23484

Query  315    LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSR--QA  372
              ++     +  ++ E+   +   +  L ++ D+ +     L++LL WLQ  +  L    + 
Sbjct  23485  IKHWNTIIKARFEEVTAWARQHQQRLSSALDELQATQELLEKLLNWLQWAETTLGEKDKD  23664

Query  373    PIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQP  417
              P+  +   V+     H+ F  E+  K+P +    +T +   T  P
Sbjct  23665  PMPQELEEVKALIAEHQTFLEEMTRKQPDVDKVTKTHKRKATADP  23799


 Score = 40.8 bits (94),  Expect = 4.9, Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 125/271 (46%), Gaps = 30/271 (11%)
 Frame = +1

Query  21     ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
              E+  W+  +++ ++    +  D   I + + K+ A  QD+  R+  +     +A  LK K
Sbjct  15055  EMLSWMEKVEESLQETPAVALDSRSIADALSKETALEQDMISRQSSV-----SAMQLKVK  15219

Query  81     ----TSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ-V  135
                  +++  A  ++  R+E +  ++ +  E  + + +++ E+     ++ +  EE +Q V
Sbjct  15220  AFVESADPAAAALLQTRMEALSQRFTDASERHKLKLKRMEELKLKVEEFEKTSEELQQFV  15399

Query  136    LGQARAKLESWKEGPYTVDAIQKKITETKQLAKD----LRQWQTNVDVANDLALKLLR--  189
              L  ++A  E+        D  Q+ I E  QL +D    L Q   +V+  + L+ +L +  
Sbjct  15400  LKSSQALTET--------DGAQRNIAELSQLVQDTSAELSQHVKDVETLHKLSEELSKLG  15555

Query  190    -DYSADDTR-KVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTE  247
               + SAD  + K+  I++N NA    + + ++E+ A +      LQ+F       + WL E
Sbjct  15556  PEGSADLLQNKMKNISDNFNA----LKETLTEKMAEVSSCQNQLQEFRAAAGVLMKWLEE  15723

Query  248    AETTANVLQDATRKERLLEDSKGVKELMKQW  278
               +     LQ    ++ L  D K V +L+  W
Sbjct  15724  TKERVPTLQPNCSEQGLRTDLKTVNDLLDAW  15816


>emb|Z68331.3| Human DNA sequence from clone GHc-521F8 on chromosome X Contains 
the 3' end of the DRP2 gene for dystrophin related protein 
2 and the 3' end of the TAF7L gene for TAF7-like RNA polymerase 
II 50kDa TATA box binding protein (TBP)-associated factor, 
complete sequence
Length=27757

 Score = 88.6 bits (218),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 39/54 (72%), Positives = 48/54 (88%), Gaps = 0/54 (0%)
 Frame = +2

Query  758   LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN  811
             LF QVA+S   CDQR LG+LLH++IQ+PRQLGEVA+FGGSN+EPSVRSCF+F +
Sbjct  4634  LFSQVANSGSQCDQRHLGVLLHEAIQVPRQLGEVAAFGGSNVEPSVRSCFRFVS  4795


 Score = 87.0 bits (214),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 38/59 (64%), Positives = 45/59 (76%), Gaps = 0/59 (0%)
 Frame = +2

Query  807   FQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFR  865
             F  +  KP IEA+ FL+W+ LEPQSMVWL VLHRV  AE  KHQ KC+IC++CPI GFR
Sbjct  5117  FP*STGKPVIEASQFLEWVNLEPQSMVWLAVLHRVTIAEQVKHQTKCSICRQCPIKGFR  5293


 Score = 85.1 bits (209),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 65/96 (67%), Gaps = 6/96 (6%)
 Frame = +2

Query  661   LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
             +DL++L+ A +  ++H+L+ ++  MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LN
Sbjct  2297  VDLVTLTTALEIFNEHDLQASEHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLN  2476

Query  721   WLLNVYD-----TGRTGRIRVLSF-KTGIISLCKAH  750
             WLLNV+D          RI+     + G++  C +H
Sbjct  2477  WLLNVFDR*GLSALEASRIKFNGISQVGLVGRCCSH  2584


 Score = 73.6 bits (179),  Expect = 7e-10, Method: Compositional matrix adjust.
 Identities = 32/46 (69%), Positives = 38/46 (82%), Gaps = 0/46 (0%)
 Frame = +3

Query  903   TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET  948
             TTS E++RDFA  LKNKFR+K YF+KHP+ GYLPVQ+VLE D  ET
Sbjct  8634  TTSSENMRDFATTLKNKFRSKHYFSKHPQRGYLPVQSVLEADYSET  8771


 Score = 69.7 bits (169),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
 Frame = +3

Query  1044   NRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARM  1103
               R LQ E  RLK QHE    +  PS  +    +    R+ EL+AEA++LRQHK RLE RM
Sbjct  12513  GRILQGELRRLKWQHEEA--AEAPSLADGSTEAATDHRNEELLAEARILRQHKSRLETRM  12686

Query  1104   QILEDHNKQLES  1115
              QILEDHNKQLES
Sbjct  12687  QILEDHNKQLES  12722


 Score = 65.9 bits (159),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 0/39 (0%)
 Frame = +2

Query  865   RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPT  903
             RYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TP 
Sbjct  6812  RYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPV  6928


 Score = 49.3 bits (116),  Expect = 0.015, Method: Compositional matrix adjust.
 Identities = 21/24 (87%), Positives = 24/24 (100%), Gaps = 0/24 (0%)
 Frame = +2

Query  636   ADLNNVRFSAYRTAMKLRRLQKAL  659
             ADLNN++FSAYRTAMKLRR+QKAL
Sbjct  1298  ADLNNIKFSAYRTAMKLRRVQKAL  1369


 Score = 40.4 bits (93),  Expect = 6.2, Method: Compositional matrix adjust.
 Identities = 17/26 (65%), Positives = 20/26 (76%), Gaps = 0/26 (0%)
 Frame = +3

Query  949   PASSPQLSHDDTHSRIEHYASRLAEM  974
             PASSP   H DTHSRIEH+ASR  ++
Sbjct  9069  PASSPMWPHADTHSRIEHFASRYHQV  9146


>gb|AC194760.4| Pan troglodytes BAC clone CH251-694P16 from chromosome x, complete 
sequence
Length=171262

 Score = 88.2 bits (217),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 39/54 (72%), Positives = 48/54 (88%), Gaps = 0/54 (0%)
 Frame = -3

Query  758    LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN  811
              LF QVA+S   CDQR LG+LLH++IQ+PRQLGEVA+FGGSN+EPSVRSCF+F +
Sbjct  23711  LFSQVANSGSQCDQRHLGVLLHEAIQVPRQLGEVAAFGGSNVEPSVRSCFRFVS  23550


 Score = 87.0 bits (214),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 38/59 (64%), Positives = 45/59 (76%), Gaps = 0/59 (0%)
 Frame = -3

Query  807    FQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFR  865
              F  +  KP IEA+ FL+W+ LEPQSMVWL VLHRV  AE  KHQ KC+IC++CPI GFR
Sbjct  23228  FP*STGKPVIEASQFLEWVNLEPQSMVWLAVLHRVTIAEQVKHQTKCSICRQCPIKGFR  23052


 Score = 85.1 bits (209),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 65/96 (67%), Gaps = 6/96 (6%)
 Frame = -3

Query  661    LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLN  720
              +DL++L+ A +  ++H+L+ ++  MD++++I+CLT +Y+RLE+E   LVNVPLCVDM LN
Sbjct  26048  VDLVTLTTALEIFNEHDLQASEHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLN  25869

Query  721    WLLNVYD-----TGRTGRIRVLSF-KTGIISLCKAH  750
              WLLNV+D          RI+     + G++  C +H
Sbjct  25868  WLLNVFDR*GLSALEASRIKFNGISQVGLVGRCCSH  25761


 Score = 83.6 bits (205),  Expect = 7e-13, Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 59/90 (65%), Gaps = 0/90 (0%)
 Frame = -3

Query  433    PEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQ  492
              P++R QN++R + KQA   +  WEKL     D  R I+ TLE+L E+Q A +EL   L Q
Sbjct  32468  PKQRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIERTLEQLLEIQGAMEELSTTLSQ  32289

Query  493    AEVIKGSWQPVGDLLIDSLQDHLEKVKALR  522
              AE ++ +W+P+GDL IDSL +H++ +K  +
Sbjct  32288  AEGVRATWEPIGDLFIDSLPEHIQAIKVCK  32199


 Score = 73.6 bits (179),  Expect = 7e-10, Method: Compositional matrix adjust.
 Identities = 32/46 (69%), Positives = 38/46 (82%), Gaps = 0/46 (0%)
 Frame = -1

Query  903    TTSGEDVRDFAKVLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMET  948
              TTS E++RDFA  LKNKFR+K YF+KHP+ GYLPVQ+VLE D  ET
Sbjct  19723  TTSSENMRDFATTLKNKFRSKHYFSKHPQRGYLPVQSVLEADYSET  19586


 Score = 67.8 bits (164),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
 Frame = -2

Query  1044   NRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARM  1103
               R LQ E  RLK QHE    +P  S  +    +    R+ EL+AEA++LRQHK RLE RM
Sbjct  15843  GRILQGELRRLKWQHEEAAEAP--SLADGSTEAAPDHRNEELLAEARILRQHKSRLETRM  15670

Query  1104   QILEDHNKQLES  1115
              QILEDHNKQLES
Sbjct  15669  QILEDHNKQLES  15634


 Score = 65.9 bits (159),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 0/39 (0%)
 Frame = -3

Query  865    RYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPT  903
              RYRSLK FN DICQ+CF +GR +KG+K+HYP++EY TP 
Sbjct  21533  RYRSLKQFNVDICQTCFLTGRASKGNKLHYPIMEYYTPV  21417


 Score = 49.3 bits (116),  Expect = 0.015, Method: Compositional matrix adjust.
 Identities = 21/24 (87%), Positives = 24/24 (100%), Gaps = 0/24 (0%)
 Frame = -3

Query  636    ADLNNVRFSAYRTAMKLRRLQKAL  659
              ADLNN++FSAYRTAMKLRR+QKAL
Sbjct  27047  ADLNNIKFSAYRTAMKLRRVQKAL  26976


 Score = 47.8 bits (112),  Expect = 0.037, Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
 Frame = -3

Query  601    WERAISPNKVPYYI-NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAM  650
              W   I    +   + +H+ QTTCWDHPKMTELYQ+L    NV F  YR  +
Sbjct  28793  WVGGIDAGTIDAIVCSHQAQTTCWDHPKMTELYQTLG--KNVGF-LYRVGI  28650


 Score = 47.4 bits (111),  Expect = 0.056, Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 0/51 (0%)
 Frame = -2

Query  338    SHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVH  388
              + LEA SD   +L L LQE++ WL  KD+ELS Q P+ GD   VQ++ + H
Sbjct  36513  ARLEAFSDHSGKLQLPLQEIIDWLSQKDEELSAQLPLQGDVALVQQEKETH  36361


 Score = 46.6 bits (109),  Expect = 0.087, Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 0/52 (0%)
 Frame = -1

Query  518    VKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLLQV  569
              ++  + E +P+K+ V  VNDLA QL    + LS  N   LE +N RWK LQV
Sbjct  31825  LQLFKEEFSPMKDGVKLVNDLAHQLAISDVHLSMENSQALEQINVRWKQLQV  31670


 Score = 44.3 bits (103),  Expect = 0.39, Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
 Frame = -3

Query  593    LSTSVQGPWERAISPNKVPYYINHET------QTTCWDHPKMTELYQSLADLN  639
              L  SVQ PWERAISPNKVPYYI   T        TC   P    L   L  L+
Sbjct  29123  LPASVQVPWERAISPNKVPYYIK*VTI*IRSGSVTCPPPPSPAFLLPVLVTLS  28965


 Score = 43.5 bits (101),  Expect = 0.74, Method: Compositional matrix adjust.
 Identities = 17/28 (60%), Positives = 23/28 (82%), Gaps = 0/28 (0%)
 Frame = -1

Query  569    VAVEDRVRQLHEAHRDFGPASQHFLSTS  596
               +V +R++QL +AHRDFGP SQHFLS +
Sbjct  31240  ASVSERLKQLQDAHRDFGPGSQHFLSCT  31157


 Score = 40.4 bits (93),  Expect = 5.6, Method: Compositional matrix adjust.
 Identities = 17/22 (77%), Positives = 18/22 (81%), Gaps = 0/22 (0%)
 Frame = -1

Query  949    PASSPQLSHDDTHSRIEHYASR  970
              PASSP   H DTHSRIEH+ASR
Sbjct  19288  PASSPMWPHADTHSRIEHFASR  19223


>ref|XR_024528.1| PREDICTED: Pan troglodytes similar to dystonin (LOC462793), mRNA
Length=24172

 Score = 88.2 bits (217),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 137/602 (22%), Positives = 252/602 (41%), Gaps = 81/602 (13%)
 Frame = +1

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  19654  ALGQFQHALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  19833

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
                A  +L   ++ +EA  +  +++E +  +W  V E  + R+QQL+  L+          
Sbjct  19834  NKAGNDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIE  20010

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDAIQKKITETKQ-----LAK  168
              D  QWL   E    A + LG     A+ +L    E     +A ++      Q     LA+
Sbjct  20011  DLQQWLTDTERHLLASKPLGGLPETAKEQLNVHMEVCAAFEAKEETYKSLMQKGQQMLAR  20190

Query  169    DLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETH  228
                +  +TN+D          +D +            N+   W S+  +++ER+  LEE  
Sbjct  20191  CPKSAETNID----------QDIN------------NLKEKWESVETKLNERKTKLEEAL  20304

Query  229    RLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAH  288
               L  +F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H
Sbjct  20305  NLAMEFHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSH  20466

Query  289    TDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWK  348
               +    LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K
Sbjct  20467  REQIIELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAK  20643

Query  349    RLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLET  408
              + H +  +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T
Sbjct  20644  QFHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRT  20823

Query  409    VRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRK  468
                                  R L  +    +    L     E+  +W+ +   S + Q K
Sbjct  20824  -------------------GRSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNK  20946

Query  469    IDETLERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAP  527
              ++E L    +  +A   L   L + E      QPV GD  ID + + ++  KA + E+  
Sbjct  20947  LEEALLFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKAFQKELGK  21120

Query  528    LKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHE  580
                 +V  +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E
Sbjct  21121  RTSSVQALKRSARELIEGSRDDSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEE  21300

Query  581    AH  582
               H
Sbjct  21301  FH  21306


 Score = 65.9 bits (159),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 87/387 (22%), Positives = 174/387 (44%), Gaps = 12/387 (3%)
 Frame = +1

Query  14     DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITA  73
              +F+ +  +  +WL+  +Q +         L+ +   I + K    ++   R Q+ EL   
Sbjct  20317  EFHNSLQDFINWLTQAEQTLNVASRPSLILDTVLFQIDEHKVFANEVNSHREQIIELDKT  20496

Query  74     AQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAE  133
                +LK  +  Q+   +I + +  +Q++W++V + L  R + L++  K + Q+ EA  +  
Sbjct  20497  GTHLKYFSQKQDV-VLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAKQFHEAWSKLM  20673

Query  134    QVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS-  192
              + L ++   L+S  E     D I+ ++ + K+  K L    +  D  N     L    S 
Sbjct  20674  EWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTGRSLKEKTSL  20853

Query  193    ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA  252
              ADD  K+  +   +   W +I  +  ER+  LEE      QF   L+  + WL   E   
Sbjct  20854  ADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALIDWLYRVE--P  21027

Query  253    NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGS-DD  311
               + +D    + +  D   V  L+   +  Q E+   T     L  ++++++   EGS DD
Sbjct  21028  QLAED----QPVHGDIDLVMNLIDNHKAFQKELGKRTSSVQALKRSARELI---EGSRDD  21186

Query  312    AVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQ  371
              +  ++ ++  ++ +W  +   S++ ++ LEA+  Q +  H  +  LL WL   +  L   
Sbjct  21187  SSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQTLRFH  21366

Query  372    APIGGDFPAVQKQNDVHRAFKRELKTK  398
                +  D  A++   D H+ F ++L+ K
Sbjct  21367  GVLPDDEDALRTLIDQHKEFMKKLEEK  21447


 Score = 62.4 bits (150),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 85/387 (21%), Positives = 167/387 (43%), Gaps = 22/387 (5%)
 Frame = +1

Query  24     DWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSN  83
              DW+ +    + S   +  DLE + + I + K    +  Q++ ++E L   A+ L  K + 
Sbjct  19363  DWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIEMERLNHQAELLLKKVTE  19542

Query  84     QEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKL  143
              +  +  + D +  ++  WD ++E + NR+ +L   L    Q+  A +E    L      L
Sbjct  19543  ESDKHTVQDPLMELKLIWDSLEERIINRQHKLEGALLALGQFQHALDELLTWLTHTEGLL  19722

Query  144    ESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMIT  203
                 K       AI+ ++ +   L  D+   Q+ V+  N     L+   + ++   +    
Sbjct  19723  SEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAVNKAGNDLIESSAGEEASNLQNKL  19902

Query  204    ENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER  263
              E +N  W+++ ++  +R+  L+   R  + F  ++E    WLT+              ER
Sbjct  19903  EVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIEDLQQWLTDT-------------ER  20043

Query  264    LLEDSK---GVKELMKQWQDLQGEI----EAHTDVYHNLDENSQKILRSLEGSDDAVLLQ  316
               L  SK   G+ E  K+  ++  E+    EA  + Y +L +  Q++L     S +  + Q
Sbjct  20044  HLLASKPLGGLPETAKEQLNVHMEVCAAFEAKEETYKSLMQKGQQMLARCPKSAETNIDQ  20223

Query  317    RRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGG  376
                ++N+  KW  +  K    ++ LE + +     H SLQ+ + WL   +  L+  +    
Sbjct  20224  -DINNLKEKWESVETKLNERKTKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRPSL  20400

Query  377    DFPAVQKQNDVHRAFKRELKT-KEPVI  402
                  V  Q D H+ F  E+ + +E +I
Sbjct  20401  ILDTVLFQIDEHKVFANEVNSHREQII  20481


 Score = 61.2 bits (147),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 135/560 (24%), Positives = 233/560 (41%), Gaps = 119/560 (21%)
 Frame = +1

Query  68     EELITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLE  127
              E+ I   +NL  KT   E +  +  ++  I+  WD   + ++ R  +L E L+ + ++ E
Sbjct  15232  EKTIAEGENLLLKTQGSE-KAALQLQLNTIKTNWDTFNKQVKERENKLKESLEKALKYKE  15408

Query  128    AKEEAEQVLGQARAKLESWKEGPYTVDAIQKK--ITETKQLAKDLRQWQTNVDVANDLAL  185
                E     + + +  LE  K   + +D  + +  I + K L K++ Q    V++ N+ A 
Sbjct  15409  QVETLRPWIDKCQNNLEEIK---FCLDPAEGENSIAKLKSLQKEMDQHFGMVELLNNTAN  15579

Query  186    KLL------RDYSADDTR----KVHMITENINAS---WRSIHKRVSEREAALEETHRLLQ  232
               LL      ++   D+ +    KV M+TE +++      ++ ++  E +   +E+ R LQ
Sbjct  15580  SLLSVCEIDKEVVTDENKSLIQKVDMVTEQLHSKKFCLENMTQKFKEFQEVSKESKRQLQ  15759

Query  233    --QFPLDLEKFLA-------WLTEAETTANVLQDATRK----ERLLED-------SKGVK  272
                +  LD+   L        +LT  +T    LQ    +    +RL +D       SKG  
Sbjct  15760  CAKEQLDIHDSLGSQAYSNKYLTMLQTQQKSLQALKHQVDLAKRLAQDLVVEASDSKGTS  15939

Query  273    ELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKK  332
              +++ Q + +  E   H+ +   +DE    +   L+G       Q  +  M  +++E    
Sbjct  15940  DVLLQVETIAQE---HSTLSQQVDEKCSFLETKLQGIGH---FQNTIREMFSQFAEF---  16092

Query  333    SLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFK  392
                                              DDEL   AP+G D   +QKQ +  +AF 
Sbjct  16093  --------------------------------DDELDSMAPVGRDAETLQKQKETIKAF-  16173

Query  393    RELKTKEPVIMS---TLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLL-RKQA  448
                LK  E +I S     +T ++ L  +  E    L    R+L  E  ++   +LL R QA
Sbjct  16174  --LKKLEALIASNDNANKTCKMMLATE--ETSPDLVGIKRDL--EALSKQCNKLLDRAQA  16335

Query  449    EEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLI  508
               E                 +++ T++RL+E      E  + L++AE  + S  PVG +  
Sbjct  16336  RE----------------EQVEGTIKRLEEFYSKLKEFSILLQKAEEHEESQGPVG-MET  16464

Query  509    DSLQDHLEKVKAL-RGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLST------LEDLN  561
              +++   L   K   + EI PL+     VN L + L    IQ +  + ST      L+D+N
Sbjct  16465  ETINQQLNMFKVFQKEEIEPLQGKQQDVNWLGQGL----IQSAAKSTSTQGLEHDLDDVN  16632

Query  562    TRWKLLQVAVEDRVRQLHEA  581
               RWK L   V  R  QL EA
Sbjct  16633  ARWKTLNKKVAQRAAQLQEA  16692


 Score = 52.8 bits (125),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 123/278 (44%), Gaps = 6/278 (2%)
 Frame = +1

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW++L +WL   ++ + S+  +  D + I   + + K   + L  +    +      
Sbjct  20647  FHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTG  20826

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              ++LK KTS  +    + D +  ++++WD +      R+ +L E L  S Q+ +A +    
Sbjct  20827  RSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALID  21006

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   I   K   K+L +  ++V      A +L+ + S D
Sbjct  21007  WLYRVEPQLAEDQPVHGDIDLVMNLIDNHKAFQKELGKRTSSVQALKRSARELI-EGSRD  21183

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA--  252
              D+  V +  + ++  W ++      ++  LE   R  ++F   +   L WL EAE T   
Sbjct  21184  DSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQTLRF  21363

Query  253    -NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHT  289
                VL D     R L D    KE MK+ ++ + E+   T
Sbjct  21364  HGVLPDDEDALRTLIDQH--KEFMKKLEEKRAELNKAT  21471


 Score = 50.8 bits (120),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 79/352 (22%), Positives = 141/352 (40%), Gaps = 48/352 (13%)
 Frame = +1

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +   Q
Sbjct  19156  QEELDIVINLGSELIAACGEPDKPIVKKSIDELNSAWDSLNKAWKDRIDKLEEAMQAAVQ  19335

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHTDV  291
              +   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE     
Sbjct  19336  YQDGLQAVFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE-----  19491

Query  292    YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                 L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +  
Sbjct  19492  MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLEERIINRQHKLEGALLALGQFQ  19671

Query  352    LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
               +L ELL WL   +  LS Q P+GGD  A++ +   H   + +                +
Sbjct  19672  HALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQND----------------V  19803

Query  412    FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
                 +  +E + K   +  E    E A N+                KL + +  WQ  +++
Sbjct  19804  LAHQSTVEAVNKAGNDLIESSAGEEASNLQN--------------KLEVLNQRWQNVLEK  19941

Query  472    TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRG  523
              T +R Q       +LD  LRQA+   G  + +   L D+ + HL   K L G
Sbjct  19942  TEQRKQ-------QLDGALRQAKGFHGEIEDLQQWLTDT-ERHLLASKPLGG  20073


 Score = 45.1 bits (105),  Expect = 0.26, Method: Compositional matrix adjust.
 Identities = 105/512 (20%), Positives = 219/512 (42%), Gaps = 64/512 (12%)
 Frame = +1

Query  87     RTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLE--  144
              + ++TD  + +  + D V E L +++  L  M +   ++ E  +E+++ L  A+ +L+  
Sbjct  15607  KEVVTDENKSLIQKVDMVTEQLHSKKFCLENMTQKFKEFQEVSKESKRQLQCAKEQLDIH  15786

Query  145    -SWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS-ADDTRKVHMI  202
               S     Y+     K +T  +   K L+  +  VD+A  LA  L+ + S +  T  V + 
Sbjct  15787  DSLGSQAYS----NKYLTMLQTQQKSLQALKHQVDLAKRLAQDLVVEASDSKGTSDVLLQ  15954

Query  203    TENINASWRSIHKRVSEREAALEETHRLLQQFPLDL----EKFLAWLTEAETTANVLQDA  258
               E I     ++ ++V E+ + LE   + +  F   +     +F  +  E ++ A V +DA
Sbjct  15955  VETIAQEHSTLSQQVDEKCSFLETKLQGIGHFQNTIREMFSQFAEFDDELDSMAPVGRDA  16134

Query  259    TRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRR  318
                 E L +  + +K  +K+       +EA      N ++  + +L + E S D V ++R 
Sbjct  16135  ---ETLQKQKETIKAFLKK-------LEALIASNDNANKTCKMMLATEETSPDLVGIKRD  16284

Query  319    LDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDF  378
              L+ ++ + ++L  ++      +E +  + +  +  L+E  + LQ  ++    Q P+G + 
Sbjct  16285  LEALSKQCNKLLDRAQAREEQVEGTIKRLEEFYSKLKEFSILLQKAEEHEESQGPVGMET  16464

Query  379    PAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQ  438
                + +Q ++ + F++E                     +PL+G ++      +   +  A+
Sbjct  16465  ETINQQLNMFKVFQKE-------------------EIEPLQGKQQDVNWLGQGLIQSAAK  16587

Query  439    NV-TRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIK  497
              +  T+ L    ++VN  W+ LN   A    ++ E L      Q+A + L           
Sbjct  16588  STSTQGLEHDLDDVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESL-----------  16734

Query  498    GSWQPVGDLLIDSLQDHLEKVKALRGEIAP-------LKENVSHVNDLARQLTTLGIQLS  550
               SW    + L+ + +    + K ++ +I         L +  S V  + R+   +     
Sbjct  16735  LSWMVDTEELVANQKPPSAEFKVVKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIATTAE  16914

Query  551    PYN----LSTLEDLNTRWKLLQVAVEDRVRQL  578
              P +    L  L  L++RW+ L    E R RQL
Sbjct  16915  PADKVKILKQLSLLDSRWEALLNKAETRNRQL  17010


>dbj|AB018271.2| Homo sapiens mRNA for KIAA0728 protein, partial cds
Length=5680

 Score = 88.2 bits (217),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 137/602 (22%), Positives = 251/602 (41%), Gaps = 81/602 (13%)
 Frame = +1

Query  11    ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
             AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  1294  ALGQFQHALDELLAWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  1473

Query  71    ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
               A  +L   ++ +EA  +  +++E +  +W  V E  + R+QQL+  L+          
Sbjct  1474  NKAGNDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIE  1650

Query  121   DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDAIQKKITETKQ-----LAK  168
             D  QWL   E    A + LG     A+ +L    E     +A ++      Q     LA+
Sbjct  1651  DLQQWLTDTERHLLASKPLGGLPETAKEQLNVHMEVCAAFEAKEETYKSLMQKGQQMLAR  1830

Query  169   DLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETH  228
               +  +TN+D   D+                     N+   W S+  +++ER+  LEE  
Sbjct  1831  CPKSAETNID--QDI--------------------NNLKEKWESVETKLNERKTKLEEAL  1944

Query  229   RLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAH  288
              L  +F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H
Sbjct  1945  NLAMEFHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSH  2106

Query  289   TDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWK  348
              +    LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K
Sbjct  2107  REQIIELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAK  2283

Query  349   RLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLET  408
             + H +  +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T
Sbjct  2284  QFHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRT  2463

Query  409   VRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRK  468
                                 R L  +    +    L     E+  +W+ +   S + Q K
Sbjct  2464  -------------------GRSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNK  2586

Query  469   IDETLERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAP  527
             ++E L    +  +A   L   L + E      QPV GD  ID + + ++  KA + E+  
Sbjct  2587  LEEALLFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKAFQKELGK  2760

Query  528   LKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHE  580
                +V  +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E
Sbjct  2761  RTSSVQALKRSARELIEGSRDDSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEE  2940

Query  581   AH  582
              H
Sbjct  2941  FH  2946


 Score = 67.0 bits (162),  Expect = 6e-08, Method: Compositional matrix adjust.
 Identities = 86/387 (22%), Positives = 171/387 (44%), Gaps = 12/387 (3%)
 Frame = +1

Query  14    DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITA  73
             +F+ +  +  +WL+  +Q +         L+ +   I + K    ++   R Q+ EL   
Sbjct  1957  EFHNSLQDFINWLTQAEQTLNVASRPSLILDTVLFQIDEHKVFANEVNSHREQIIELDKT  2136

Query  74    AQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAE  133
               +LK  +  Q+   +I + +  +Q++W++V + L  R + L++  K + Q+ EA  +  
Sbjct  2137  GTHLKYFSQKQDV-VLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAKQFHEAWSKLM  2313

Query  134   QVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS-  192
             + L ++   L+S  E     D I+ ++ + K+  K L    +  D  N     L    S 
Sbjct  2314  EWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTGRSLKEKTSL  2493

Query  193   ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA  252
             ADD  K+  +   +   W +I  +  ER+  LEE      QF   L+  + WL   E   
Sbjct  2494  ADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALIDWLYRVEPQL  2673

Query  253   NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGS-DD  311
                      + +  D   V  L+   +  Q E+   T     L  ++++++   EGS DD
Sbjct  2674  ------AEDQPVHGDIDLVMNLIDNHKAFQKELGKRTSSVQALKRSARELI---EGSRDD  2826

Query  312   AVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQ  371
             +  ++ ++  ++ +W  +   S++ ++ LEA+  Q +  H  +  LL WL   +  L   
Sbjct  2827  SSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQTLRFH  3006

Query  372   APIGGDFPAVQKQNDVHRAFKRELKTK  398
               +  D  A++   D H+ F ++L+ K
Sbjct  3007  GVLPDDEDALRTLIDQHKEFMKKLEEK  3087


 Score = 62.8 bits (151),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 103/489 (21%), Positives = 209/489 (42%), Gaps = 43/489 (8%)
 Frame = +1

Query  24    DWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSN  83
             DW+ +    + S   +  DLE + + I + K    +  Q++ ++E L   A+ L  K + 
Sbjct  1003  DWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIEMERLNHQAELLLKKVTE  1182

Query  84    QEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKL  143
             +  +  + D +  ++  WD ++E + NR+ +L   L    Q+  A +E    L      L
Sbjct  1183  ESDKHTVQDPLMELKLIWDSLEERIINRQHKLEGALLALGQFQHALDELLAWLTHTEGLL  1362

Query  144   ESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMIT  203
                K       AI+ ++ +   L  D+   Q+ V+  N     L+   + ++   +    
Sbjct  1363  SEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAVNKAGNDLIESSAGEEASNLQNKL  1542

Query  204   ENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER  263
             E +N  W+++ ++  +R+  L+   R  + F  ++E    WLT+              ER
Sbjct  1543  EVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIEDLQQWLTDT-------------ER  1683

Query  264   LLEDSK---GVKELMKQWQDLQGEI----EAHTDVYHNLDENSQKILRSLEGSDDAVLLQ  316
              L  SK   G+ E  K+  ++  E+    EA  + Y +L +  Q++L     S +  + Q
Sbjct  1684  HLLASKPLGGLPETAKEQLNVHMEVCAAFEAKEETYKSLMQKGQQMLARCPKSAETNIDQ  1863

Query  317   RRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGG  376
               ++N+  KW  +  K    ++ LE + +     H SLQ+ + WL   +  L+  +    
Sbjct  1864  -DINNLKEKWESVETKLNERKTKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRPSL  2040

Query  377   DFPAVQKQNDVHRAFKRELKTKEPVIMSTLET---VRIFLTEQPLEGLEKLYQEPRELPP  433
                 V  Q D H+ F  E+ +    I+   +T   ++ F  +Q +  ++ L      +  
Sbjct  2041  ILDTVLFQIDEHKVFANEVNSHREQIIELDKTGTHLKYFSQKQDVVLIKNLL-----ISV  2205

Query  434   EERAQNVTRLL----------RKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEAT  483
             + R + V + L          RK+A++ +  W KL     +W  + +++L+   E+    
Sbjct  2206  QSRWEKVVQRLVERGRSLDDARKRAKQFHEAWSKL----MEWLEESEKSLDSELEIANDP  2373

Query  484   DELDLKLRQ  492
             D++  +L Q
Sbjct  2374  DKIKTQLAQ  2400


 Score = 53.5 bits (127),  Expect = 6e-04, Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 123/278 (44%), Gaps = 6/278 (2%)
 Frame = +1

Query  15    FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
             F+ AW++L +WL   ++ + S+  +  D + I   + + K   + L  +    +      
Sbjct  2287  FHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTG  2466

Query  75    QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
             ++LK KTS  +    + D +  ++++WD +      R+ +L E L  S Q+ +A +    
Sbjct  2467  RSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALID  2646

Query  135   VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
              L +   +L   +     +D +   I   K   K+L +  ++V      A +L+ + S D
Sbjct  2647  WLYRVEPQLAEDQPVHGDIDLVMNLIDNHKAFQKELGKRTSSVQALKRSARELI-EGSRD  2823

Query  195   DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA--  252
             D+  V +  + ++  W ++      ++  LE   R  ++F   +   L WL EAE T   
Sbjct  2824  DSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQTLRF  3003

Query  253   -NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHT  289
               VL D     R L D    KE MK+ ++ + E+   T
Sbjct  3004  HGVLPDDEDALRTLIDQH--KEFMKKLEEKRAELNKAT  3111


 Score = 50.8 bits (120),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 79/352 (22%), Positives = 141/352 (40%), Gaps = 48/352 (13%)
 Frame = +1

Query  174   QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
             Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +   Q
Sbjct  796   QEELDIVINLGSELIAACGEPDKPIVKKSIDELNSAWDSLNKAWKDRIDKLEEAMQAAVQ  975

Query  234   FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHTDV  291
             +   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE     
Sbjct  976   YQDGLQAVFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE-----  1131

Query  292   YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +  
Sbjct  1132  MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLEERIINRQHKLEGALLALGQFQ  1311

Query  352   LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
              +L ELL WL   +  LS Q P+GGD  A++ +   H   + +                +
Sbjct  1312  HALDELLAWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQND----------------V  1443

Query  412   FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
                +  +E + K   +  E    E A N+                KL + +  WQ  +++
Sbjct  1444  LAHQSTVEAVNKAGNDLIESSAGEEASNLQN--------------KLEVLNQRWQNVLEK  1581

Query  472   TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRG  523
             T +R Q       +LD  LRQA+   G  + +   L D+ + HL   K L G
Sbjct  1582  TEQRKQ-------QLDGALRQAKGFHGEIEDLQQWLTDT-ERHLLASKPLGG  1713


>ref|NM_001144771.1| Homo sapiens dystonin (DST), transcript variant 4, mRNA
Length=17656

 Score = 87.8 bits (216),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 137/602 (22%), Positives = 252/602 (41%), Gaps = 81/602 (13%)
 Frame = +3

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  13002  ALGQFQHALDELLAWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  13181

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
                A  +L   ++ +EA  +  +++E +  +W  V E  + R+QQL+  L+          
Sbjct  13182  NKAGNDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIE  13358

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDAIQKKITETKQ-----LAK  168
              D  QWL   E    A + LG     A+ +L    E     +A ++      Q     LA+
Sbjct  13359  DLQQWLTDTERHLLASKPLGGLPETAKEQLNVHMEVCAAFEAKEETYKSLMQKGQQMLAR  13538

Query  169    DLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETH  228
                +  +TN+D          +D +            N+   W S+  +++ER+  LEE  
Sbjct  13539  CPKSAETNID----------QDIN------------NLKEKWESVETKLNERKTKLEEAL  13652

Query  229    RLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAH  288
               L  +F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H
Sbjct  13653  NLAMEFHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSH  13814

Query  289    TDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWK  348
               +    LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K
Sbjct  13815  REQIIELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAK  13991

Query  349    RLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLET  408
              + H +  +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T
Sbjct  13992  QFHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRT  14171

Query  409    VRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRK  468
                                  R L  +    +    L     E+  +W+ +   S + Q K
Sbjct  14172  -------------------GRSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNK  14294

Query  469    IDETLERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAP  527
              ++E L    +  +A   L   L + E      QPV GD  ID + + ++  KA + E+  
Sbjct  14295  LEEALLFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKAFQKELGK  14468

Query  528    LKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHE  580
                 +V  +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E
Sbjct  14469  RTSSVQALKRSARELIEGSRDDSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEE  14648

Query  581    AH  582
               H
Sbjct  14649  FH  14654


 Score = 65.5 bits (158),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 87/387 (22%), Positives = 174/387 (44%), Gaps = 12/387 (3%)
 Frame = +3

Query  14     DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITA  73
              +F+ +  +  +WL+  +Q +         L+ +   I + K    ++   R Q+ EL   
Sbjct  13665  EFHNSLQDFINWLTQAEQTLNVASRPSLILDTVLFQIDEHKVFANEVNSHREQIIELDKT  13844

Query  74     AQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAE  133
                +LK  +  Q+   +I + +  +Q++W++V + L  R + L++  K + Q+ EA  +  
Sbjct  13845  GTHLKYFSQKQDV-VLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAKQFHEAWSKLM  14021

Query  134    QVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS-  192
              + L ++   L+S  E     D I+ ++ + K+  K L    +  D  N     L    S 
Sbjct  14022  EWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTGRSLKEKTSL  14201

Query  193    ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA  252
              ADD  K+  +   +   W +I  +  ER+  LEE      QF   L+  + WL   E   
Sbjct  14202  ADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALIDWLYRVE--P  14375

Query  253    NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGS-DD  311
               + +D    + +  D   V  L+   +  Q E+   T     L  ++++++   EGS DD
Sbjct  14376  QLAED----QPVHGDIDLVMNLIDNHKAFQKELGKRTSSVQALKRSARELI---EGSRDD  14534

Query  312    AVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQ  371
              +  ++ ++  ++ +W  +   S++ ++ LEA+  Q +  H  +  LL WL   +  L   
Sbjct  14535  SSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQTLRFH  14714

Query  372    APIGGDFPAVQKQNDVHRAFKRELKTK  398
                +  D  A++   D H+ F ++L+ K
Sbjct  14715  GVLPDDEDALRTLIDQHKEFMKKLEEK  14795


 Score = 62.0 bits (149),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 85/387 (21%), Positives = 167/387 (43%), Gaps = 22/387 (5%)
 Frame = +3

Query  24     DWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSN  83
              DW+ +    + S   +  DLE + + I + K    +  Q++ ++E L   A+ L  K + 
Sbjct  12711  DWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIEMERLNHQAELLLKKVTE  12890

Query  84     QEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKL  143
              +  +  + D +  ++  WD ++E + NR+ +L   L    Q+  A +E    L      L
Sbjct  12891  ESDKHTVQDPLMELKLIWDSLEERIINRQHKLEGALLALGQFQHALDELLAWLTHTEGLL  13070

Query  144    ESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMIT  203
                 K       AI+ ++ +   L  D+   Q+ V+  N     L+   + ++   +    
Sbjct  13071  SEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAVNKAGNDLIESSAGEEASNLQNKL  13250

Query  204    ENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER  263
              E +N  W+++ ++  +R+  L+   R  + F  ++E    WLT+              ER
Sbjct  13251  EVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIEDLQQWLTDT-------------ER  13391

Query  264    LLEDSK---GVKELMKQWQDLQGEI----EAHTDVYHNLDENSQKILRSLEGSDDAVLLQ  316
               L  SK   G+ E  K+  ++  E+    EA  + Y +L +  Q++L     S +  + Q
Sbjct  13392  HLLASKPLGGLPETAKEQLNVHMEVCAAFEAKEETYKSLMQKGQQMLARCPKSAETNIDQ  13571

Query  317    RRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGG  376
                ++N+  KW  +  K    ++ LE + +     H SLQ+ + WL   +  L+  +    
Sbjct  13572  -DINNLKEKWESVETKLNERKTKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRPSL  13748

Query  377    DFPAVQKQNDVHRAFKRELKT-KEPVI  402
                  V  Q D H+ F  E+ + +E +I
Sbjct  13749  ILDTVLFQIDEHKVFANEVNSHREQII  13829


 Score = 52.0 bits (123),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 123/278 (44%), Gaps = 6/278 (2%)
 Frame = +3

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW++L +WL   ++ + S+  +  D + I   + + K   + L  +    +      
Sbjct  13995  FHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTG  14174

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              ++LK KTS  +    + D +  ++++WD +      R+ +L E L  S Q+ +A +    
Sbjct  14175  RSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALID  14354

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   I   K   K+L +  ++V      A +L+ + S D
Sbjct  14355  WLYRVEPQLAEDQPVHGDIDLVMNLIDNHKAFQKELGKRTSSVQALKRSARELI-EGSRD  14531

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA--  252
              D+  V +  + ++  W ++      ++  LE   R  ++F   +   L WL EAE T   
Sbjct  14532  DSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQTLRF  14711

Query  253    -NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHT  289
                VL D     R L D    KE MK+ ++ + E+   T
Sbjct  14712  HGVLPDDEDALRTLIDQH--KEFMKKLEEKRAELNKAT  14819


 Score = 50.8 bits (120),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 79/352 (22%), Positives = 141/352 (40%), Gaps = 48/352 (13%)
 Frame = +3

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +   Q
Sbjct  12504  QEELDIVINLGSELIAACGEPDKPIVKKSIDELNSAWDSLNKAWKDRIDKLEEAMQAAVQ  12683

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHTDV  291
              +   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE     
Sbjct  12684  YQDGLQAVFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE-----  12839

Query  292    YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                 L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +  
Sbjct  12840  MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLEERIINRQHKLEGALLALGQFQ  13019

Query  352    LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
               +L ELL WL   +  LS Q P+GGD  A++ +   H   + +                +
Sbjct  13020  HALDELLAWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQND----------------V  13151

Query  412    FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
                 +  +E + K   +  E    E A N+                KL + +  WQ  +++
Sbjct  13152  LAHQSTVEAVNKAGNDLIESSAGEEASNLQN--------------KLEVLNQRWQNVLEK  13289

Query  472    TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRG  523
              T +R Q       +LD  LRQA+   G  + +   L D+ + HL   K L G
Sbjct  13290  TEQRKQ-------QLDGALRQAKGFHGEIEDLQQWLTDT-ERHLLASKPLGG  13421


>ref|NM_001144770.1| Homo sapiens dystonin (DST), transcript variant 3, mRNA
Length=17774

 Score = 87.8 bits (216),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 137/602 (22%), Positives = 252/602 (41%), Gaps = 81/602 (13%)
 Frame = +1

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  13120  ALGQFQHALDELLAWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  13299

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
                A  +L   ++ +EA  +  +++E +  +W  V E  + R+QQL+  L+          
Sbjct  13300  NKAGNDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIE  13476

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDAIQKKITETKQ-----LAK  168
              D  QWL   E    A + LG     A+ +L    E     +A ++      Q     LA+
Sbjct  13477  DLQQWLTDTERHLLASKPLGGLPETAKEQLNVHMEVCAAFEAKEETYKSLMQKGQQMLAR  13656

Query  169    DLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETH  228
                +  +TN+D          +D +            N+   W S+  +++ER+  LEE  
Sbjct  13657  CPKSAETNID----------QDIN------------NLKEKWESVETKLNERKTKLEEAL  13770

Query  229    RLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAH  288
               L  +F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H
Sbjct  13771  NLAMEFHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSH  13932

Query  289    TDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWK  348
               +    LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K
Sbjct  13933  REQIIELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAK  14109

Query  349    RLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLET  408
              + H +  +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T
Sbjct  14110  QFHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRT  14289

Query  409    VRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRK  468
                                  R L  +    +    L     E+  +W+ +   S + Q K
Sbjct  14290  -------------------GRSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNK  14412

Query  469    IDETLERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAP  527
              ++E L    +  +A   L   L + E      QPV GD  ID + + ++  KA + E+  
Sbjct  14413  LEEALLFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKAFQKELGK  14586

Query  528    LKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHE  580
                 +V  +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E
Sbjct  14587  RTSSVQALKRSARELIEGSRDDSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEE  14766

Query  581    AH  582
               H
Sbjct  14767  FH  14772


 Score = 65.5 bits (158),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 87/387 (22%), Positives = 174/387 (44%), Gaps = 12/387 (3%)
 Frame = +1

Query  14     DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITA  73
              +F+ +  +  +WL+  +Q +         L+ +   I + K    ++   R Q+ EL   
Sbjct  13783  EFHNSLQDFINWLTQAEQTLNVASRPSLILDTVLFQIDEHKVFANEVNSHREQIIELDKT  13962

Query  74     AQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAE  133
                +LK  +  Q+   +I + +  +Q++W++V + L  R + L++  K + Q+ EA  +  
Sbjct  13963  GTHLKYFSQKQDV-VLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAKQFHEAWSKLM  14139

Query  134    QVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS-  192
              + L ++   L+S  E     D I+ ++ + K+  K L    +  D  N     L    S 
Sbjct  14140  EWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTGRSLKEKTSL  14319

Query  193    ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA  252
              ADD  K+  +   +   W +I  +  ER+  LEE      QF   L+  + WL   E   
Sbjct  14320  ADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALIDWLYRVE--P  14493

Query  253    NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGS-DD  311
               + +D    + +  D   V  L+   +  Q E+   T     L  ++++++   EGS DD
Sbjct  14494  QLAED----QPVHGDIDLVMNLIDNHKAFQKELGKRTSSVQALKRSARELI---EGSRDD  14652

Query  312    AVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQ  371
              +  ++ ++  ++ +W  +   S++ ++ LEA+  Q +  H  +  LL WL   +  L   
Sbjct  14653  SSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQTLRFH  14832

Query  372    APIGGDFPAVQKQNDVHRAFKRELKTK  398
                +  D  A++   D H+ F ++L+ K
Sbjct  14833  GVLPDDEDALRTLIDQHKEFMKKLEEK  14913


 Score = 62.0 bits (149),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 85/387 (21%), Positives = 167/387 (43%), Gaps = 22/387 (5%)
 Frame = +1

Query  24     DWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSN  83
              DW+ +    + S   +  DLE + + I + K    +  Q++ ++E L   A+ L  K + 
Sbjct  12829  DWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIEMERLNHQAELLLKKVTE  13008

Query  84     QEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKL  143
              +  +  + D +  ++  WD ++E + NR+ +L   L    Q+  A +E    L      L
Sbjct  13009  ESDKHTVQDPLMELKLIWDSLEERIINRQHKLEGALLALGQFQHALDELLAWLTHTEGLL  13188

Query  144    ESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMIT  203
                 K       AI+ ++ +   L  D+   Q+ V+  N     L+   + ++   +    
Sbjct  13189  SEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAVNKAGNDLIESSAGEEASNLQNKL  13368

Query  204    ENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER  263
              E +N  W+++ ++  +R+  L+   R  + F  ++E    WLT+              ER
Sbjct  13369  EVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIEDLQQWLTDT-------------ER  13509

Query  264    LLEDSK---GVKELMKQWQDLQGEI----EAHTDVYHNLDENSQKILRSLEGSDDAVLLQ  316
               L  SK   G+ E  K+  ++  E+    EA  + Y +L +  Q++L     S +  + Q
Sbjct  13510  HLLASKPLGGLPETAKEQLNVHMEVCAAFEAKEETYKSLMQKGQQMLARCPKSAETNIDQ  13689

Query  317    RRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGG  376
                ++N+  KW  +  K    ++ LE + +     H SLQ+ + WL   +  L+  +    
Sbjct  13690  -DINNLKEKWESVETKLNERKTKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRPSL  13866

Query  377    DFPAVQKQNDVHRAFKRELKT-KEPVI  402
                  V  Q D H+ F  E+ + +E +I
Sbjct  13867  ILDTVLFQIDEHKVFANEVNSHREQII  13947


 Score = 52.0 bits (123),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 123/278 (44%), Gaps = 6/278 (2%)
 Frame = +1

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW++L +WL   ++ + S+  +  D + I   + + K   + L  +    +      
Sbjct  14113  FHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTG  14292

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              ++LK KTS  +    + D +  ++++WD +      R+ +L E L  S Q+ +A +    
Sbjct  14293  RSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALID  14472

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   I   K   K+L +  ++V      A +L+ + S D
Sbjct  14473  WLYRVEPQLAEDQPVHGDIDLVMNLIDNHKAFQKELGKRTSSVQALKRSARELI-EGSRD  14649

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA--  252
              D+  V +  + ++  W ++      ++  LE   R  ++F   +   L WL EAE T   
Sbjct  14650  DSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQTLRF  14829

Query  253    -NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHT  289
                VL D     R L D    KE MK+ ++ + E+   T
Sbjct  14830  HGVLPDDEDALRTLIDQH--KEFMKKLEEKRAELNKAT  14937


 Score = 50.8 bits (120),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 79/352 (22%), Positives = 141/352 (40%), Gaps = 48/352 (13%)
 Frame = +1

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +   Q
Sbjct  12622  QEELDIVINLGSELIAACGEPDKPIVKKSIDELNSAWDSLNKAWKDRIDKLEEAMQAAVQ  12801

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHTDV  291
              +   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE     
Sbjct  12802  YQDGLQAVFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE-----  12957

Query  292    YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                 L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +  
Sbjct  12958  MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLEERIINRQHKLEGALLALGQFQ  13137

Query  352    LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
               +L ELL WL   +  LS Q P+GGD  A++ +   H   + +                +
Sbjct  13138  HALDELLAWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQND----------------V  13269

Query  412    FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
                 +  +E + K   +  E    E A N+                KL + +  WQ  +++
Sbjct  13270  LAHQSTVEAVNKAGNDLIESSAGEEASNLQN--------------KLEVLNQRWQNVLEK  13407

Query  472    TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRG  523
              T +R Q       +LD  LRQA+   G  + +   L D+ + HL   K L G
Sbjct  13408  TEQRKQ-------QLDGALRQAKGFHGEIEDLQQWLTDT-ERHLLASKPLGG  13539


>ref|NM_001144769.1| Homo sapiens dystonin (DST), transcript variant 2, mRNA
Length=18090

 Score = 87.8 bits (216),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 137/602 (22%), Positives = 252/602 (41%), Gaps = 81/602 (13%)
 Frame = +2

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  13436  ALGQFQHALDELLAWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  13615

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
                A  +L   ++ +EA  +  +++E +  +W  V E  + R+QQL+  L+          
Sbjct  13616  NKAGNDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIE  13792

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDAIQKKITETKQ-----LAK  168
              D  QWL   E    A + LG     A+ +L    E     +A ++      Q     LA+
Sbjct  13793  DLQQWLTDTERHLLASKPLGGLPETAKEQLNVHMEVCAAFEAKEETYKSLMQKGQQMLAR  13972

Query  169    DLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETH  228
                +  +TN+D          +D +            N+   W S+  +++ER+  LEE  
Sbjct  13973  CPKSAETNID----------QDIN------------NLKEKWESVETKLNERKTKLEEAL  14086

Query  229    RLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAH  288
               L  +F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H
Sbjct  14087  NLAMEFHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSH  14248

Query  289    TDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWK  348
               +    LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K
Sbjct  14249  REQIIELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAK  14425

Query  349    RLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLET  408
              + H +  +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T
Sbjct  14426  QFHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRT  14605

Query  409    VRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRK  468
                                  R L  +    +    L     E+  +W+ +   S + Q K
Sbjct  14606  -------------------GRSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNK  14728

Query  469    IDETLERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAP  527
              ++E L    +  +A   L   L + E      QPV GD  ID + + ++  KA + E+  
Sbjct  14729  LEEALLFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKAFQKELGK  14902

Query  528    LKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHE  580
                 +V  +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E
Sbjct  14903  RTSSVQALKRSARELIEGSRDDSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEE  15082

Query  581    AH  582
               H
Sbjct  15083  FH  15088


 Score = 65.5 bits (158),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 87/387 (22%), Positives = 174/387 (44%), Gaps = 12/387 (3%)
 Frame = +2

Query  14     DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITA  73
              +F+ +  +  +WL+  +Q +         L+ +   I + K    ++   R Q+ EL   
Sbjct  14099  EFHNSLQDFINWLTQAEQTLNVASRPSLILDTVLFQIDEHKVFANEVNSHREQIIELDKT  14278

Query  74     AQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAE  133
                +LK  +  Q+   +I + +  +Q++W++V + L  R + L++  K + Q+ EA  +  
Sbjct  14279  GTHLKYFSQKQDV-VLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAKQFHEAWSKLM  14455

Query  134    QVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS-  192
              + L ++   L+S  E     D I+ ++ + K+  K L    +  D  N     L    S 
Sbjct  14456  EWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTGRSLKEKTSL  14635

Query  193    ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA  252
              ADD  K+  +   +   W +I  +  ER+  LEE      QF   L+  + WL   E   
Sbjct  14636  ADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALIDWLYRVE--P  14809

Query  253    NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGS-DD  311
               + +D    + +  D   V  L+   +  Q E+   T     L  ++++++   EGS DD
Sbjct  14810  QLAED----QPVHGDIDLVMNLIDNHKAFQKELGKRTSSVQALKRSARELI---EGSRDD  14968

Query  312    AVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQ  371
              +  ++ ++  ++ +W  +   S++ ++ LEA+  Q +  H  +  LL WL   +  L   
Sbjct  14969  SSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQTLRFH  15148

Query  372    APIGGDFPAVQKQNDVHRAFKRELKTK  398
                +  D  A++   D H+ F ++L+ K
Sbjct  15149  GVLPDDEDALRTLIDQHKEFMKKLEEK  15229


 Score = 62.0 bits (149),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 85/387 (21%), Positives = 167/387 (43%), Gaps = 22/387 (5%)
 Frame = +2

Query  24     DWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSN  83
              DW+ +    + S   +  DLE + + I + K    +  Q++ ++E L   A+ L  K + 
Sbjct  13145  DWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIEMERLNHQAELLLKKVTE  13324

Query  84     QEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKL  143
              +  +  + D +  ++  WD ++E + NR+ +L   L    Q+  A +E    L      L
Sbjct  13325  ESDKHTVQDPLMELKLIWDSLEERIINRQHKLEGALLALGQFQHALDELLAWLTHTEGLL  13504

Query  144    ESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMIT  203
                 K       AI+ ++ +   L  D+   Q+ V+  N     L+   + ++   +    
Sbjct  13505  SEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAVNKAGNDLIESSAGEEASNLQNKL  13684

Query  204    ENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER  263
              E +N  W+++ ++  +R+  L+   R  + F  ++E    WLT+              ER
Sbjct  13685  EVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIEDLQQWLTDT-------------ER  13825

Query  264    LLEDSK---GVKELMKQWQDLQGEI----EAHTDVYHNLDENSQKILRSLEGSDDAVLLQ  316
               L  SK   G+ E  K+  ++  E+    EA  + Y +L +  Q++L     S +  + Q
Sbjct  13826  HLLASKPLGGLPETAKEQLNVHMEVCAAFEAKEETYKSLMQKGQQMLARCPKSAETNIDQ  14005

Query  317    RRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGG  376
                ++N+  KW  +  K    ++ LE + +     H SLQ+ + WL   +  L+  +    
Sbjct  14006  -DINNLKEKWESVETKLNERKTKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRPSL  14182

Query  377    DFPAVQKQNDVHRAFKRELKT-KEPVI  402
                  V  Q D H+ F  E+ + +E +I
Sbjct  14183  ILDTVLFQIDEHKVFANEVNSHREQII  14263


 Score = 52.0 bits (123),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 123/278 (44%), Gaps = 6/278 (2%)
 Frame = +2

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW++L +WL   ++ + S+  +  D + I   + + K   + L  +    +      
Sbjct  14429  FHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTG  14608

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              ++LK KTS  +    + D +  ++++WD +      R+ +L E L  S Q+ +A +    
Sbjct  14609  RSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALID  14788

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   I   K   K+L +  ++V      A +L+ + S D
Sbjct  14789  WLYRVEPQLAEDQPVHGDIDLVMNLIDNHKAFQKELGKRTSSVQALKRSARELI-EGSRD  14965

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA--  252
              D+  V +  + ++  W ++      ++  LE   R  ++F   +   L WL EAE T   
Sbjct  14966  DSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQTLRF  15145

Query  253    -NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHT  289
                VL D     R L D    KE MK+ ++ + E+   T
Sbjct  15146  HGVLPDDEDALRTLIDQH--KEFMKKLEEKRAELNKAT  15253


 Score = 50.8 bits (120),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 79/352 (22%), Positives = 141/352 (40%), Gaps = 48/352 (13%)
 Frame = +2

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +   Q
Sbjct  12938  QEELDIVINLGSELIAACGEPDKPIVKKSIDELNSAWDSLNKAWKDRIDKLEEAMQAAVQ  13117

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHTDV  291
              +   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE     
Sbjct  13118  YQDGLQAVFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE-----  13273

Query  292    YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                 L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +  
Sbjct  13274  MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLEERIINRQHKLEGALLALGQFQ  13453

Query  352    LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
               +L ELL WL   +  LS Q P+GGD  A++ +   H   + +                +
Sbjct  13454  HALDELLAWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQND----------------V  13585

Query  412    FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
                 +  +E + K   +  E    E A N+                KL + +  WQ  +++
Sbjct  13586  LAHQSTVEAVNKAGNDLIESSAGEEASNLQN--------------KLEVLNQRWQNVLEK  13723

Query  472    TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRG  523
              T +R Q       +LD  LRQA+   G  + +   L D+ + HL   K L G
Sbjct  13724  TEQRKQ-------QLDGALRQAKGFHGEIEDLQQWLTDT-ERHLLASKPLGG  13855


>ref|NM_183380.2| Homo sapiens dystonin (DST), transcript variant 1, mRNA
Length=18035

 Score = 87.8 bits (216),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 137/602 (22%), Positives = 252/602 (41%), Gaps = 81/602 (13%)
 Frame = +2

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  13394  ALGQFQHALDELLAWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  13573

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
                A  +L   ++ +EA  +  +++E +  +W  V E  + R+QQL+  L+          
Sbjct  13574  NKAGNDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIE  13750

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDAIQKKITETKQ-----LAK  168
              D  QWL   E    A + LG     A+ +L    E     +A ++      Q     LA+
Sbjct  13751  DLQQWLTDTERHLLASKPLGGLPETAKEQLNVHMEVCAAFEAKEETYKSLMQKGQQMLAR  13930

Query  169    DLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETH  228
                +  +TN+D          +D +            N+   W S+  +++ER+  LEE  
Sbjct  13931  CPKSAETNID----------QDIN------------NLKEKWESVETKLNERKTKLEEAL  14044

Query  229    RLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAH  288
               L  +F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H
Sbjct  14045  NLAMEFHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSH  14206

Query  289    TDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWK  348
               +    LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K
Sbjct  14207  REQIIELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAK  14383

Query  349    RLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLET  408
              + H +  +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T
Sbjct  14384  QFHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRT  14563

Query  409    VRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRK  468
                                  R L  +    +    L     E+  +W+ +   S + Q K
Sbjct  14564  -------------------GRSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNK  14686

Query  469    IDETLERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAP  527
              ++E L    +  +A   L   L + E      QPV GD  ID + + ++  KA + E+  
Sbjct  14687  LEEALLFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKAFQKELGK  14860

Query  528    LKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHE  580
                 +V  +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E
Sbjct  14861  RTSSVQALKRSARELIEGSRDDSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEE  15040

Query  581    AH  582
               H
Sbjct  15041  FH  15046


 Score = 65.5 bits (158),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 87/387 (22%), Positives = 174/387 (44%), Gaps = 12/387 (3%)
 Frame = +2

Query  14     DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITA  73
              +F+ +  +  +WL+  +Q +         L+ +   I + K    ++   R Q+ EL   
Sbjct  14057  EFHNSLQDFINWLTQAEQTLNVASRPSLILDTVLFQIDEHKVFANEVNSHREQIIELDKT  14236

Query  74     AQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAE  133
                +LK  +  Q+   +I + +  +Q++W++V + L  R + L++  K + Q+ EA  +  
Sbjct  14237  GTHLKYFSQKQDV-VLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAKQFHEAWSKLM  14413

Query  134    QVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS-  192
              + L ++   L+S  E     D I+ ++ + K+  K L    +  D  N     L    S 
Sbjct  14414  EWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTGRSLKEKTSL  14593

Query  193    ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA  252
              ADD  K+  +   +   W +I  +  ER+  LEE      QF   L+  + WL   E   
Sbjct  14594  ADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALIDWLYRVE--P  14767

Query  253    NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGS-DD  311
               + +D    + +  D   V  L+   +  Q E+   T     L  ++++++   EGS DD
Sbjct  14768  QLAED----QPVHGDIDLVMNLIDNHKAFQKELGKRTSSVQALKRSARELI---EGSRDD  14926

Query  312    AVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQ  371
              +  ++ ++  ++ +W  +   S++ ++ LEA+  Q +  H  +  LL WL   +  L   
Sbjct  14927  SSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQTLRFH  15106

Query  372    APIGGDFPAVQKQNDVHRAFKRELKTK  398
                +  D  A++   D H+ F ++L+ K
Sbjct  15107  GVLPDDEDALRTLIDQHKEFMKKLEEK  15187


 Score = 62.0 bits (149),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 85/387 (21%), Positives = 167/387 (43%), Gaps = 22/387 (5%)
 Frame = +2

Query  24     DWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSN  83
              DW+ +    + S   +  DLE + + I + K    +  Q++ ++E L   A+ L  K + 
Sbjct  13103  DWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIEMERLNHQAELLLKKVTE  13282

Query  84     QEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKL  143
              +  +  + D +  ++  WD ++E + NR+ +L   L    Q+  A +E    L      L
Sbjct  13283  ESDKHTVQDPLMELKLIWDSLEERIINRQHKLEGALLALGQFQHALDELLAWLTHTEGLL  13462

Query  144    ESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMIT  203
                 K       AI+ ++ +   L  D+   Q+ V+  N     L+   + ++   +    
Sbjct  13463  SEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAVNKAGNDLIESSAGEEASNLQNKL  13642

Query  204    ENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER  263
              E +N  W+++ ++  +R+  L+   R  + F  ++E    WLT+              ER
Sbjct  13643  EVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIEDLQQWLTDT-------------ER  13783

Query  264    LLEDSK---GVKELMKQWQDLQGEI----EAHTDVYHNLDENSQKILRSLEGSDDAVLLQ  316
               L  SK   G+ E  K+  ++  E+    EA  + Y +L +  Q++L     S +  + Q
Sbjct  13784  HLLASKPLGGLPETAKEQLNVHMEVCAAFEAKEETYKSLMQKGQQMLARCPKSAETNIDQ  13963

Query  317    RRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGG  376
                ++N+  KW  +  K    ++ LE + +     H SLQ+ + WL   +  L+  +    
Sbjct  13964  -DINNLKEKWESVETKLNERKTKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRPSL  14140

Query  377    DFPAVQKQNDVHRAFKRELKT-KEPVI  402
                  V  Q D H+ F  E+ + +E +I
Sbjct  14141  ILDTVLFQIDEHKVFANEVNSHREQII  14221


 Score = 52.0 bits (123),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 123/278 (44%), Gaps = 6/278 (2%)
 Frame = +2

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW++L +WL   ++ + S+  +  D + I   + + K   + L  +    +      
Sbjct  14387  FHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTG  14566

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              ++LK KTS  +    + D +  ++++WD +      R+ +L E L  S Q+ +A +    
Sbjct  14567  RSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALID  14746

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   I   K   K+L +  ++V      A +L+ + S D
Sbjct  14747  WLYRVEPQLAEDQPVHGDIDLVMNLIDNHKAFQKELGKRTSSVQALKRSARELI-EGSRD  14923

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA--  252
              D+  V +  + ++  W ++      ++  LE   R  ++F   +   L WL EAE T   
Sbjct  14924  DSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQTLRF  15103

Query  253    -NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHT  289
                VL D     R L D    KE MK+ ++ + E+   T
Sbjct  15104  HGVLPDDEDALRTLIDQH--KEFMKKLEEKRAELNKAT  15211


 Score = 50.8 bits (120),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 79/352 (22%), Positives = 141/352 (40%), Gaps = 48/352 (13%)
 Frame = +2

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +   Q
Sbjct  12896  QEELDIVINLGSELIAACGEPDKPIVKKSIDELNSAWDSLNKAWKDRIDKLEEAMQAAVQ  13075

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHTDV  291
              +   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE     
Sbjct  13076  YQDGLQAVFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE-----  13231

Query  292    YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                 L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +  
Sbjct  13232  MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLEERIINRQHKLEGALLALGQFQ  13411

Query  352    LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
               +L ELL WL   +  LS Q P+GGD  A++ +   H   + +                +
Sbjct  13412  HALDELLAWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQND----------------V  13543

Query  412    FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
                 +  +E + K   +  E    E A N+                KL + +  WQ  +++
Sbjct  13544  LAHQSTVEAVNKAGNDLIESSAGEEASNLQN--------------KLEVLNQRWQNVLEK  13681

Query  472    TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRG  523
              T +R Q       +LD  LRQA+   G  + +   L D+ + HL   K L G
Sbjct  13682  TEQRKQ-------QLDGALRQAKGFHGEIEDLQQWLTDT-ERHLLASKPLGG  13813


>ref|NM_015548.3| Homo sapiens dystonin (DST), transcript variant 1eA, mRNA
Length=16645

 Score = 87.8 bits (216),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 137/602 (22%), Positives = 252/602 (41%), Gaps = 81/602 (13%)
 Frame = +1

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  12004  ALGQFQHALDELLAWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  12183

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
                A  +L   ++ +EA  +  +++E +  +W  V E  + R+QQL+  L+          
Sbjct  12184  NKAGNDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIE  12360

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDAIQKKITETKQ-----LAK  168
              D  QWL   E    A + LG     A+ +L    E     +A ++      Q     LA+
Sbjct  12361  DLQQWLTDTERHLLASKPLGGLPETAKEQLNVHMEVCAAFEAKEETYKSLMQKGQQMLAR  12540

Query  169    DLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETH  228
                +  +TN+D          +D +            N+   W S+  +++ER+  LEE  
Sbjct  12541  CPKSAETNID----------QDIN------------NLKEKWESVETKLNERKTKLEEAL  12654

Query  229    RLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAH  288
               L  +F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H
Sbjct  12655  NLAMEFHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSH  12816

Query  289    TDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWK  348
               +    LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K
Sbjct  12817  REQIIELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAK  12993

Query  349    RLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLET  408
              + H +  +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T
Sbjct  12994  QFHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRT  13173

Query  409    VRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRK  468
                                  R L  +    +    L     E+  +W+ +   S + Q K
Sbjct  13174  -------------------GRSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNK  13296

Query  469    IDETLERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAP  527
              ++E L    +  +A   L   L + E      QPV GD  ID + + ++  KA + E+  
Sbjct  13297  LEEALLFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKAFQKELGK  13470

Query  528    LKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHE  580
                 +V  +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E
Sbjct  13471  RTSSVQALKRSARELIEGSRDDSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEE  13650

Query  581    AH  582
               H
Sbjct  13651  FH  13656


 Score = 65.5 bits (158),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 87/387 (22%), Positives = 174/387 (44%), Gaps = 12/387 (3%)
 Frame = +1

Query  14     DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITA  73
              +F+ +  +  +WL+  +Q +         L+ +   I + K    ++   R Q+ EL   
Sbjct  12667  EFHNSLQDFINWLTQAEQTLNVASRPSLILDTVLFQIDEHKVFANEVNSHREQIIELDKT  12846

Query  74     AQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAE  133
                +LK  +  Q+   +I + +  +Q++W++V + L  R + L++  K + Q+ EA  +  
Sbjct  12847  GTHLKYFSQKQDV-VLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAKQFHEAWSKLM  13023

Query  134    QVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS-  192
              + L ++   L+S  E     D I+ ++ + K+  K L    +  D  N     L    S 
Sbjct  13024  EWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTGRSLKEKTSL  13203

Query  193    ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA  252
              ADD  K+  +   +   W +I  +  ER+  LEE      QF   L+  + WL   E   
Sbjct  13204  ADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALIDWLYRVE--P  13377

Query  253    NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGS-DD  311
               + +D    + +  D   V  L+   +  Q E+   T     L  ++++++   EGS DD
Sbjct  13378  QLAED----QPVHGDIDLVMNLIDNHKAFQKELGKRTSSVQALKRSARELI---EGSRDD  13536

Query  312    AVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQ  371
              +  ++ ++  ++ +W  +   S++ ++ LEA+  Q +  H  +  LL WL   +  L   
Sbjct  13537  SSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQTLRFH  13716

Query  372    APIGGDFPAVQKQNDVHRAFKRELKTK  398
                +  D  A++   D H+ F ++L+ K
Sbjct  13717  GVLPDDEDALRTLIDQHKEFMKKLEEK  13797


 Score = 62.0 bits (149),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 85/387 (21%), Positives = 167/387 (43%), Gaps = 22/387 (5%)
 Frame = +1

Query  24     DWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSN  83
              DW+ +    + S   +  DLE + + I + K    +  Q++ ++E L   A+ L  K + 
Sbjct  11713  DWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIEMERLNHQAELLLKKVTE  11892

Query  84     QEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKL  143
              +  +  + D +  ++  WD ++E + NR+ +L   L    Q+  A +E    L      L
Sbjct  11893  ESDKHTVQDPLMELKLIWDSLEERIINRQHKLEGALLALGQFQHALDELLAWLTHTEGLL  12072

Query  144    ESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMIT  203
                 K       AI+ ++ +   L  D+   Q+ V+  N     L+   + ++   +    
Sbjct  12073  SEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAVNKAGNDLIESSAGEEASNLQNKL  12252

Query  204    ENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER  263
              E +N  W+++ ++  +R+  L+   R  + F  ++E    WLT+              ER
Sbjct  12253  EVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIEDLQQWLTDT-------------ER  12393

Query  264    LLEDSK---GVKELMKQWQDLQGEI----EAHTDVYHNLDENSQKILRSLEGSDDAVLLQ  316
               L  SK   G+ E  K+  ++  E+    EA  + Y +L +  Q++L     S +  + Q
Sbjct  12394  HLLASKPLGGLPETAKEQLNVHMEVCAAFEAKEETYKSLMQKGQQMLARCPKSAETNIDQ  12573

Query  317    RRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGG  376
                ++N+  KW  +  K    ++ LE + +     H SLQ+ + WL   +  L+  +    
Sbjct  12574  -DINNLKEKWESVETKLNERKTKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRPSL  12750

Query  377    DFPAVQKQNDVHRAFKRELKT-KEPVI  402
                  V  Q D H+ F  E+ + +E +I
Sbjct  12751  ILDTVLFQIDEHKVFANEVNSHREQII  12831


 Score = 52.0 bits (123),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 123/278 (44%), Gaps = 6/278 (2%)
 Frame = +1

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW++L +WL   ++ + S+  +  D + I   + + K   + L  +    +      
Sbjct  12997  FHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTG  13176

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              ++LK KTS  +    + D +  ++++WD +      R+ +L E L  S Q+ +A +    
Sbjct  13177  RSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALID  13356

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   I   K   K+L +  ++V      A +L+ + S D
Sbjct  13357  WLYRVEPQLAEDQPVHGDIDLVMNLIDNHKAFQKELGKRTSSVQALKRSARELI-EGSRD  13533

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA--  252
              D+  V +  + ++  W ++      ++  LE   R  ++F   +   L WL EAE T   
Sbjct  13534  DSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQTLRF  13713

Query  253    -NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHT  289
                VL D     R L D    KE MK+ ++ + E+   T
Sbjct  13714  HGVLPDDEDALRTLIDQH--KEFMKKLEEKRAELNKAT  13821


 Score = 50.8 bits (120),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 79/352 (22%), Positives = 141/352 (40%), Gaps = 48/352 (13%)
 Frame = +1

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +   Q
Sbjct  11506  QEELDIVINLGSELIAACGEPDKPIVKKSIDELNSAWDSLNKAWKDRIDKLEEAMQAAVQ  11685

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHTDV  291
              +   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE     
Sbjct  11686  YQDGLQAVFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE-----  11841

Query  292    YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                 L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +  
Sbjct  11842  MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLEERIINRQHKLEGALLALGQFQ  12021

Query  352    LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
               +L ELL WL   +  LS Q P+GGD  A++ +   H   + +                +
Sbjct  12022  HALDELLAWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQND----------------V  12153

Query  412    FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
                 +  +E + K   +  E    E A N+                KL + +  WQ  +++
Sbjct  12154  LAHQSTVEAVNKAGNDLIESSAGEEASNLQN--------------KLEVLNQRWQNVLEK  12291

Query  472    TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRG  523
              T +R Q       +LD  LRQA+   G  + +   L D+ + HL   K L G
Sbjct  12292  TEQRKQ-------QLDGALRQAKGFHGEIEDLQQWLTDT-ERHLLASKPLGG  12423


>ref|XM_001995054.1| Drosophila grimshawi GH22959 (Dgri\GH22959), mRNA
Length=16200

 Score = 87.4 bits (215),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 104/502 (20%), Positives = 225/502 (44%), Gaps = 26/502 (5%)
 Frame = +1

Query  29     LDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSNQEART  88
              L++ +  Q       +DI +  +  +    +++Q +P++E++     NL N     + + 
Sbjct  11755  LEETLSCQEPPAAQPQDIKKQQVALQEIRHEIDQTKPEVEQVRRHGSNLMNMCGEPD-KP  11931

Query  89     IITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKE  148
               +   IE + N WD +      R + L + ++ + ++ E  +   + L +A  K      
Sbjct  11932  EVKKHIEDLDNAWDNITALYAKREENLIDAMEKAMEFHETLQNLLKFLTKAEDKFAHLGA  12111

Query  149    GPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINA  208
                  +DA++++I + K    ++      V+  N  A++L    S +    +      +N 
Sbjct  12112  VGSDIDAVKRQIEQLKAFKDEVDPHMVEVEALNRQAVELTERTSPEQAASIREPLTVVNR  12291

Query  209    SWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDS  268
               W S+ + + +R+  LE     L QF   L + L W+ + ++T + L+      +LLE  
Sbjct  12292  RWESLLRGMVDRQKQLEHALLHLGQFQHALNELLVWINKTDSTLDQLKPIPGDPQLLE--  12465

Query  269    KGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSE  328
                  EL K  + L  +I+AH +    L++  ++++ + +GS +A   Q +L  +N +W +
Sbjct  12466  ---VELAK-LKVLANDIQAHQNSVDTLNDAGRQLIETEKGSVEASTTQEKLRKLNNEWKQ  12633

Query  329    LRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVH  388
              L +K+ + +  LE S  + +     +Q++L WL   D  +    P+GG      +Q +  
Sbjct  12634  LLQKASDRQHELEESLREAQGYIAEVQDILGWLGDVDAVIGASKPVGGLPETATEQLERF  12813

Query  389    RAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQA  448
                   EL    P +    ET++        +G E + ++ +   P    Q+  R L+++ 
Sbjct  12814  MEVYNELDENRPKV----ETIQA-------QGQEYIKRQNQMKVPSSNLQHTLRTLKQR-  12957

Query  449    EEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLI  508
                    W+ +   ++D + K++  L+   E  +        L QAE    + +PV  +L 
Sbjct  12958  ------WDAVVSRASDKKIKLEIALKEATEFHDTLQAFVEWLTQAEKQLSNAEPVSRVL-  13116

Query  509    DSLQDHLEKVKALRGEIAPLKE  530
              +++Q  +E+ K L+ +++  +E
Sbjct  13117  ETIQAQMEEHKVLQKDVSTHRE  13182


 Score = 54.7 bits (130),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 114/586 (19%), Positives = 252/586 (43%), Gaps = 49/586 (8%)
 Frame = +1

Query  21     ELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNK  80
              EL +W   +D  ++   +   + + +   + + ++   D+  ++ ++ ++  A++ +  +
Sbjct  10738  ELLEWFREMDTTLREADLPAMEPKLVRAQLQEHRSINDDISSQKGRVRDVTAASKKVLRE  10917

Query  81     TSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQAR  140
              +   E    + ++++ ++   D V +    R   L + L  S  + ++ +     L +  
Sbjct  10918  SPQSENTATLREKLDDLKEIVDTVAQLCSERLGILEQALPLSEHFADSHQGLTTWLDEME  11097

Query  141    AKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVH  200
               ++          D I  +  + ++L   + + +  +D  N     L    + DD+ K++
Sbjct  11098  QQISRLSMPALRPDQITLQQDKNERLLHSIAEHKPLLDKLNKTGEALGALVADDDSAKIN  11277

Query  201    MITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATR  260
               I +  NA + ++   + ER+ ALE   +   QF   LE  L  L      AN +    +
Sbjct  11278  EILDTDNARYAALRLELRERQQALENALQESSQFSDKLEGMLRAL------ANTVDQVNQ  11439

Query  261    KERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKIL-RSLEGSDDAVL-LQRR  318
               + L    + ++E ++    L  +++   D +  +   +  ++ ++   +D AV  ++ +
Sbjct  11440  LDPLSALPQKIREQIEDNDALMDDLDKRQDAFSAVQRAANDVIAKAGNKADPAVRDIKAK  11619

Query  319    LDNMNFKWSEL----RKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDE--LSRQA  372
              L+ +N  W+++    +K+  ++   L  +   WK+L+  ++       LKD E  LS Q 
Sbjct  11620  LEKLNTLWNDVQKATKKRGSSLDDILSVAEPFWKQLNSVMK------TLKDLEETLSCQE  11781

Query  373    PIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELP  432
              P       ++KQ    +  + E+   +P +    E VR   +      L  +  EP +  
Sbjct  11782  PPAAQPQDIKKQQVALQEIRHEIDQTKPEV----EQVRRHGS-----NLMNMCGEPDK--  11928

Query  433    PEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQ  492
              PE         ++K  E+++  W+ +    A  +  + + +E+  E  E    L   L +
Sbjct  11929  PE---------VKKHIEDLDNAWDNITALYAKREENLIDAMEKAMEFHETLQNLLKFLTK  12081

Query  493    AEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPY  552
              AE        VG   ID+++  +E++KA + E+ P   ++  V  L RQ   L  + SP 
Sbjct  12082  AEDKFAHLGAVGS-DIDAVKRQIEQLKAFKDEVDP---HMVEVEALNRQAVELTERTSPE  12249

Query  553    NLSTLED----LNTRWKLLQVAVEDRVRQLHEAHRDFGPASQHFLS  594
                +++ +    +N RW+ L   + DR +QL  A    G   QH L+
Sbjct  12250  QAASIREPLTVVNRRWESLLRGMVDRQKQLEHALLHLG-QFQHALN  12384


 Score = 49.3 bits (116),  Expect = 0.014, Method: Compositional matrix adjust.
 Identities = 88/413 (21%), Positives = 167/413 (40%), Gaps = 34/413 (8%)
 Frame = +1

Query  14     DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITA  73
              +F+       +WL+  ++ + +   +   LE I   + + K   +D+   R  +  L   
Sbjct  13027  EFHDTLQAFVEWLTQAEKQLSNAEPVSRVLETIQAQMEEHKVLQKDVSTHREAMLLLDKK  13206

Query  74     AQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEA-----  128
                +LK  +  Q+   +I + +  +Q++W+ V      R + L+   K++ ++ +A     
Sbjct  13207  GTHLKYFSQKQDV-ILIKNLLVSVQHRWERVVSKAAERTRALDHGYKEAREFNDAWNGMM  13383

Query  129    --KEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALK  186
                 +E EQVL Q   +  + KE P  +     K+ ET    + L   Q+  D        
Sbjct  13384  QYLQETEQVLDQIIEEATASKE-PQKIKKYIIKLKETH---RQLGAKQSVYDATMRTGKN  13551

Query  187    LLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
              L+      D   +  +   +   W  +  +  ER+  LEE   L  QF   L + L WL 
Sbjct  13552  LMERAPKGDRPVLDKMLLELKEQWTRVWSKSIERQRKLEEALLLSGQFSDALGELLEWLK  13731

Query  247    EAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENS---QKIL  303
              +A            K RL E+     +L    + +QG  E H  +  +L + +   Q +L
Sbjct  13732  KA------------KSRLNENGPVHGDL----ETVQGLCEHHKHIEQDLQKRAAQMQGVL  13863

Query  304    ---RSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
                 R LE S +   +  +LD +   W E++         LE +    ++L+  +Q L  W
Sbjct  13864  KTGRDLERSGNNPEVGAKLDELQSIWDEVQNAVGKRGERLEVALTDAEKLNARVQALFDW  14043

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFL  413
              L   +++L        D    ++  D+H  F ++L+ +E     T E   + +
Sbjct  14044  LDHAENKLRYAKNAPDDEKVSREMMDIHMEFMKDLRVREREKSETFEYAEVII  14202


 Score = 46.6 bits (109),  Expect = 0.093, Method: Compositional matrix adjust.
 Identities = 66/363 (18%), Positives = 152/363 (41%), Gaps = 25/363 (6%)
 Frame = +1

Query  26     LSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELIT-------------  72
              L  L +    Q   + D++D++E   + K    +L+Q R Q E+                
Sbjct  9091   LKALREFYDMQSQTLDDIQDVSEEFKRMKPVGSELDQIRRQQEDFRNFRERKVEPLAQNV  9270

Query  73     -----AAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLE  127
                   + ++L        +  +I   +E++ ++W++++E +  R ++L+  L  S ++ E
Sbjct  9271   DKVNMSGRDLVRSAGTGVSTNVIEKDLEKLNDRWNDLKERMNERDRRLDVALLQSGKFQE  9450

Query  128    AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
              A     + L      + + K        ++ ++ E K L K L   Q ++    +L  ++
Sbjct  9451   ALAGLSKWLSDTEEMVANQKSPSCDYKVVKAQLQEQKFLKKMLLDRQNSMGSLANLGKEV  9630

Query  188    LRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTE  247
                     +   +     ++   + ++     +RE  LEE   + ++F   +     WL  
Sbjct  9631   ASHCEPAERASIEKQLNDLMKRFDALTNGAEQREQDLEEAMEVAKRFHDKISPLELWLDN  9810

Query  248    AETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLE  307
               E     +      E +  D + +++ +++   L  EI      + +L + + +++  L 
Sbjct  9811   TERAVKAM------ELIPTDEEKIQQRIREHDRLHDEILGKQPDFTDLADVAGQLMH-LV  9969

Query  308    GSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDE  367
                ++AV L  ++  +  +++ L   S NI + L  S    + L LS Q+L+ W++  ++E
Sbjct  9970   SDEEAVNLGEKVRTVTERYTGLVDASDNIGALLAESRQGLRHLVLSYQDLVAWMESMENE  10149

Query  368    LSR  370
              L R
Sbjct  10150  LKR  10158


 Score = 45.8 bits (107),  Expect = 0.16, Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 115/251 (45%), Gaps = 17/251 (6%)
 Frame = +1

Query  156   IQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS-ADDTRKVHMITENINASWRSIH  214
             +Q++I E K L  DL+  Q ++D     A  LL   S A  T+KV     ++   +  + 
Sbjct  5791  LQEQIREHKVLLADLQSHQASIDSVQVSAKHLLASASNARITKKVESNLNDVTGKFEKLF  5970

Query  215   KRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDA--TRKERLLEDSKGVK  272
             ++ ++R   L++ H  L        K+L  ++  E     LQ+A  +R+  LL      +
Sbjct  5971  EKANKRGEFLDDVHGRLS-------KYLDDISNMEQRMGSLQEALDSRETSLL----ATE  6117

Query  273   ELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKK  332
             EL ++  DL  E +    ++ +   N + ++  L    D   L+ R+  +  +W  +   
Sbjct  6118  ELARRMLDLAREKDQLAPLFEDCVRNGKDLI-GLRDVTDTGALRDRIKELESQWRNI-NI  6291

Query  333   SLNIRSHLEASSDQWKRLHLSLQE-LLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAF  391
             S++ R+ L     + +  + SL++ +L WL   +  ++  AP+  D   +++QND  +  
Sbjct  6292  SIDERAKLSKQKAERQVAYESLKDDVLSWLTRTEGRVNGLAPVAIDLDKIRQQNDELKPI  6471

Query  392   KRELKTKEPVI  402
              ++ +   P I
Sbjct  6472  CKDYRDYAPTI  6504


 Score = 42.0 bits (97),  Expect = 2.1, Method: Compositional matrix adjust.
 Identities = 109/572 (19%), Positives = 229/572 (40%), Gaps = 84/572 (14%)
 Frame = +1

Query  30    DQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTI  89
             D+ IK  R ++ D+ +   ++   KA ++D+ +R+      +  A+ L+ +  N      
Sbjct  6940  DRCIKQARKILEDMYEKQSLLDTTKAQVKDILRRKSD----VPGAEQLRLENDN------  7089

Query  90    ITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDS-------TQWLEAKEEAEQVLGQARAK  142
                    IQ +W  + +  +NR    +E L+D          WL++KE    VLG     
Sbjct  7090  -------IQEKWKNLNDICKNR-IAFSEKLRDFLDTHGNLKSWLDSKERMLTVLG-----  7230

Query  143   LESWKEGPYTVD--AIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD-DTRKV  199
                    P + D   +Q ++ + + L ++ R  Q  +    +L   ++   +   D + V
Sbjct  7231  -------PISSDPRMVQSQVQQVQVLREEFRTQQPQLKHFQELGHDVVDHLAGTPDAQAV  7389

Query  200   HMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQ-DA  258
              +  +++   W  +  ++ +R  +L       ++F   + +    L       + L  D 
Sbjct  7390  ELKLKDVLTKWDDLMGKLDDRANSLGGAADSSKEFDAAVNRLREALQNISDNLDTLPLDG  7569

Query  259   TRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRR  318
               +E L           ++ ++L+ ++E    +  ++++++  +   L        +  R
Sbjct  7570  DHQENL-----------RKIENLERQLEGQRPLLADVEQSAATLCNILGDPASRADVNSR  7716

Query  319   LDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDF  378
             +  +  ++S L+KK    ++  EAS    +    +  + L WL  +   L+ +  +    
Sbjct  7717  VAALEKQYSALQKKLDTKKAETEASLRDGRHFAENCSKTLGWLSGELSNLTDRLLVSAHK  7896

Query  379   PAVQKQNDVHRAFKRELKTKE-PVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERA  437
             P +Q Q D H    RE+  +E  VIM                    L  + ++L   ER 
Sbjct  7897  PTLQHQIDTHEPIYREVMAREHEVIM--------------------LINKGKDLT--ERQ  8010

Query  438   QNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIK  497
             Q+  R +++  + +  +WEKL   + D   ++   +E  ++  + ++     LR AE   
Sbjct  8011  QD--RGVKRDLDRIQQQWEKLRREAVDRHTRLQTCMEHCKKYSQTSETFLAWLRTAEDKL  8184

Query  498   GSWQPVGDLLIDSLQDHLEKVKALRGEI---APLKENVSHVNDLARQLTTLGIQLSPYNL  554
                 P G L   +L+  L  ++  R E+   +   EN   + D    LT+  I   P   
Sbjct  8185  ADLTP-GVLSKSNLETRLRDLQTFRSEVWKHSGEFENTKGLGDTF--LTSCDIDKEPIK-  8352

Query  555   STLEDLNTRWKLLQVAVEDRVRQLHEAHRDFG  586
             + L+D+  RW+ L   +  R  ++    R  G
Sbjct  8353  AELQDIRDRWERLNNDLIARAHEIENCSRRLG  8448


 Score = 40.8 bits (94),  Expect = 4.6, Method: Compositional matrix adjust.
 Identities = 96/506 (18%), Positives = 204/506 (40%), Gaps = 67/506 (13%)
 Frame = +1

Query  93    RIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESW------  146
             +++ +  +WD++   L +R   L      S ++  A     + L      L++       
Sbjct  7396  KLKDVLTKWDDLMGKLDDRANSLGGAADSSKEFDAAVNRLREALQNISDNLDTLPLDGDH  7575

Query  147   KEGPYTVDAIQKKITETKQLAKDLRQ-WQTNVDVANDLALKLLRDYSADDTRKVHMITEN  205
             +E    ++ +++++   + L  D+ Q   T  ++  D A +      AD   +V  + + 
Sbjct  7576  QENLRKIENLERQLEGQRPLLADVEQSAATLCNILGDPASR------ADVNSRVAALEKQ  7737

Query  206   INASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLL  265
              +A  + +  + +E EA+L +     + F  +  K L WL+        L + T  +RLL
Sbjct  7738  YSALQKKLDTKKAETEASLRDG----RHFAENCSKTLGWLS------GELSNLT--DRLL  7881

Query  266   EDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAV------LLQRRL  319
                     +      LQ +I+ H  +Y  +     +++  +    D         ++R L
Sbjct  7882  --------VSAHKPTLQHQIDTHEPIYREVMAREHEVIMLINKGKDLTERQQDRGVKRDL  8037

Query  320   DNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFP  379
             D +  +W +LR+++++  + L+   +  K+   + +  L WL+  +D+L+   P      
Sbjct  8038  DRIQQQWEKLRREAVDRHTRLQTCMEHCKKYSQTSETFLAWLRTAEDKLADLTPGVLSKS  8217

Query  380   AVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQN  439
              ++ +    + F+ E+        +T      FLT   ++      +EP           
Sbjct  8218  NLETRLRDLQTFRSEVWKHSGEFENTKGLGDTFLTSCDID------KEP-----------  8346

Query  440   VTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGS  499
                 ++ + +++   WE+LN        +I+    RL +  +    LD  LR+ E    +
Sbjct  8347  ----IKAELQDIRDRWERLNNDLIARAHEIENCSRRLGDFNDELRNLDHSLRRCEDRLAA  8514

Query  500   WQPVGDLLIDSLQDHLEKVKALRGEIA----PLKENVSHVNDLARQLTTLGIQLSPYNLS  555
                +G    D     LE+VKA+R E+     PL+       D++ +    G   + +  S
Sbjct  8515  HDALGGAAKDP--KLLERVKAIREELTSLGKPLQSLKGQAKDISAEARATGGD-ADHLTS  8685

Query  556   TLEDLNTRWKLLQVAVEDRVRQLHEA  581
              ++ L  R   LQ  ++DR  +L  A
Sbjct  8686  EVDSLADRMSELQERLDDRCGELQSA  8763


>gb|AF213443.1|AF213443 Homo sapiens dystrophin (DMD) gene, exon 75 and partial cds
Length=603

 Score = 87.4 bits (215),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 0/63 (0%)
 Frame = +1

Query  1083  AELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPS  1142
             AELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQ + E     T +    
Sbjct  1     AELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQVRREMGFLQTFIFPS*  180

Query  1143  TSL  1145
             T L
Sbjct  181   TKL  189


>gb|AF400226.1| Homo sapiens bullous pemphigoid antigen 1 eA (BPAG1) mRNA, complete 
cds
Length=16282

 Score = 86.7 bits (213),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 136/602 (22%), Positives = 251/602 (41%), Gaps = 81/602 (13%)
 Frame = +1

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  11896  ALGQFQHALDELLAWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  12075

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
                   +L   ++ +EA  +  +++E +  +W  V E  + R+QQL+  L+          
Sbjct  12076  NKGGNDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIE  12252

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDAIQKKITETKQ-----LAK  168
              D  QWL   E    A + LG     A+ +L    E     +A ++      Q     LA+
Sbjct  12253  DLQQWLTDTERHLLASKPLGGLPETAKEQLNVHMEVCAAFEAKEETYKSLMQKGQQMLAR  12432

Query  169    DLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETH  228
                +  +TN+D          +D +            N+   W S+  +++ER+  LEE  
Sbjct  12433  CPKSAETNID----------QDIN------------NLKEKWESVETKLNERKTKLEEAL  12546

Query  229    RLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAH  288
               L  +F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H
Sbjct  12547  NLAMEFHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSH  12708

Query  289    TDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWK  348
               +    LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K
Sbjct  12709  REQIIELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAK  12885

Query  349    RLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLET  408
              + H +  +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T
Sbjct  12886  QFHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRT  13065

Query  409    VRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRK  468
                                  R L  +    +    L     E+  +W+ +   S + Q K
Sbjct  13066  -------------------GRSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNK  13188

Query  469    IDETLERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAP  527
              ++E L    +  +A   L   L + E      QPV GD  ID + + ++  KA + E+  
Sbjct  13189  LEEALLFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKAFQKELGK  13362

Query  528    LKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHE  580
                 +V  +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E
Sbjct  13363  RTSSVQALKRSARELIXGSRDDSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEE  13542

Query  581    AH  582
               H
Sbjct  13543  FH  13548


 Score = 63.9 bits (154),  Expect = 5e-07, Method: Compositional matrix adjust.
 Identities = 84/386 (21%), Positives = 171/386 (44%), Gaps = 10/386 (2%)
 Frame = +1

Query  14     DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITA  73
              +F+ +  +  +WL+  +Q +         L+ +   I + K    ++   R Q+ EL   
Sbjct  12559  EFHNSLQDFINWLTQAEQTLNVASRPSLILDTVLFQIDEHKVFANEVNSHREQIIELDKT  12738

Query  74     AQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAE  133
                +LK  +  Q+   +I + +  +Q++W++V + L  R + L++  K + Q+ EA  +  
Sbjct  12739  GTHLKYFSQKQDV-VLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAKQFHEAWSKLM  12915

Query  134    QVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS-  192
              + L ++   L+S  E     D I+ ++ + K+  K L    +  D  N     L    S 
Sbjct  12916  EWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTGRSLKEKTSL  13095

Query  193    ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA  252
              ADD  K+  +   +   W +I  +  ER+  LEE      QF   L+  + WL   E   
Sbjct  13096  ADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALIDWLYRVE--P  13269

Query  253    NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDA  312
               + +D    + +  D   V  L+   +  Q E+   T     L  ++++++      DD+
Sbjct  13270  QLAED----QPVHGDIDLVMNLIDNHKAFQKELGKRTSSVQALKRSARELIXG--SRDDS  13431

Query  313    VLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQA  372
                ++ ++  ++ +W  +   S++ ++ LEA+  Q +  H  +  LL WL   +  L    
Sbjct  13432  SWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQTLRFHG  13611

Query  373    PIGGDFPAVQKQNDVHRAFKRELKTK  398
               +  D  A++   D H+ F ++L+ K
Sbjct  13612  VLPDDEDALRTLIDQHKEFMKKLEEK  13689


 Score = 61.6 bits (148),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 85/387 (21%), Positives = 167/387 (43%), Gaps = 22/387 (5%)
 Frame = +1

Query  24     DWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSN  83
              DW+ +    + S   +  DLE + + I + K    +  Q++ ++E L   A+ L  K + 
Sbjct  11605  DWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIEMERLNHQAELLLKKVTE  11784

Query  84     QEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKL  143
              +  +  + D +  ++  WD ++E + NR+ +L   L    Q+  A +E    L      L
Sbjct  11785  ESDKHTVQDPLMELKLIWDSLEERIINRQHKLEGALLALGQFQHALDELLAWLTHTEGLL  11964

Query  144    ESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMIT  203
                 K       AI+ ++ +   L  D+   Q+ V+  N     L+   + ++   +    
Sbjct  11965  SEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAVNKGGNDLIESSAGEEASNLQNKL  12144

Query  204    ENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKER  263
              E +N  W+++ ++  +R+  L+   R  + F  ++E    WLT+              ER
Sbjct  12145  EVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIEDLQQWLTDT-------------ER  12285

Query  264    LLEDSK---GVKELMKQWQDLQGEI----EAHTDVYHNLDENSQKILRSLEGSDDAVLLQ  316
               L  SK   G+ E  K+  ++  E+    EA  + Y +L +  Q++L     S +  + Q
Sbjct  12286  HLLASKPLGGLPETAKEQLNVHMEVCAAFEAKEETYKSLMQKGQQMLARCPKSAETNIDQ  12465

Query  317    RRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGG  376
                ++N+  KW  +  K    ++ LE + +     H SLQ+ + WL   +  L+  +    
Sbjct  12466  -DINNLKEKWESVETKLNERKTKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRPSL  12642

Query  377    DFPAVQKQNDVHRAFKRELKT-KEPVI  402
                  V  Q D H+ F  E+ + +E +I
Sbjct  12643  ILDTVLFQIDEHKVFANEVNSHREQII  12723


 Score = 52.4 bits (124),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 109/534 (20%), Positives = 216/534 (40%), Gaps = 81/534 (15%)
 Frame = +1

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMV----------GDLEDINEMIIKQKATMQDLEQRR  64
               + A ++ T +   +DQ+++S   +V           ++E I E I + K    D+E+ +
Sbjct  10882  LDEAISQSTQFHDKIDQILESLERIVERLRQPPSISAEVEKIKEQISENKNVSVDMEKLQ  11061

Query  65     PQLEELITAAQNLKNKTSNQE---ARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKD  121
              P  E L    + +  ++   +   +   + D+++++   W+ +   ++ R  +L      
Sbjct  11062  PLYETLKQRGEEMIARSGGTDKDISAKAVQDKLDQMVFIWENIHTLVEEREAKL------  11223

Query  122    STQWLEAKEEAEQVLGQARAKLESWK---------EGPYTVDAIQKKITETKQ-LAKDLR  171
                  L+  E AE+      + + + K         EGP    ++ K+  E  + + +++ 
Sbjct  11224  ----LDVMELAEKFWCDHMSLIVTIKDTQDFIRDLEGPGIDPSVVKQQQEAAETIREEID  11391

Query  172    QWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLL  231
                Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +  
Sbjct  11392  GLQEELDIVINLGSELIAACGEPDKPIVKKSIDELNSAWDSLNKAWKDRIDKLEEAMQAA  11571

Query  232    QQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHT  289
               Q+   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE   
Sbjct  11572  VQYQDGLQAVFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE---  11733

Query  290    DVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKR  349
                   L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +
Sbjct  11734  --MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLEERIINRQHKLEGALLALGQ  11907

Query  350    LHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETV  409
                 +L ELL WL   +  LS Q P+GGD  A++ +   H   + +               
Sbjct  11908  FQHALDELLAWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQND---------------  12042

Query  410    RIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKI  469
               +   +  +E + K   +  E    E A N+                KL + +  WQ  +
Sbjct  12043  -VLAHQSTVEAVNKGGNDLIESSAGEEASNLQN--------------KLEVLNQRWQNVL  12177

Query  470    DETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRG  523
              ++T +R Q       +LD  LRQA+   G  + +   L D+ + HL   K L G
Sbjct  12178  EKTEQRKQ-------QLDGALRQAKGFHGEIEDLQQWLTDT-ERHLLASKPLGG  12315


 Score = 52.0 bits (123),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 122/278 (43%), Gaps = 6/278 (2%)
 Frame = +1

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW++L +WL   ++ + S+  +  D + I   + + K   + L  +    +      
Sbjct  12889  FHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTG  13068

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              ++LK KTS  +    + D +  ++++WD +      R+ +L E L  S Q+ +A +    
Sbjct  13069  RSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALID  13248

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   I   K   K+L +  ++V      A +L+   S D
Sbjct  13249  WLYRVEPQLAEDQPVHGDIDLVMNLIDNHKAFQKELGKRTSSVQALKRSARELIXG-SRD  13425

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA--  252
              D+  V +  + ++  W ++      ++  LE   R  ++F   +   L WL EAE T   
Sbjct  13426  DSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQTLRF  13605

Query  253    -NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHT  289
                VL D     R L D    KE MK+ ++ + E+   T
Sbjct  13606  HGVLPDDEDALRTLIDQH--KEFMKKLEEKRAELNKAT  13713


>emb|CU677663.1| Synthetic construct Homo sapiens gateway clone IMAGE:100020365 
5' read DTNB mRNA
Length=1208

 Score = 86.7 bits (213),  Expect = 8e-14, Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 13/203 (6%)
 Frame = +2

Query  637  DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
            + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  92   NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVI  271

Query  695  TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
            ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  272  SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGK  445

Query  751  LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
            + DK RY+F Q++ S G     +    L + +++P  + E  SFG +  E SVR+CF   
Sbjct  446  MLDKLRYVFSQMSDSNGLMIFSKFDQFLKEVLKLPTAVFEGPSFGYT--EHSVRTCFP--  613

Query  811  NNKPEIEAALFLDWMRLEPQSMV  833
              + +I   +FLD M  +P S V
Sbjct  614  -QQRKIMLNMFLDTMMADPPSPV  679


>ref|XM_001252266.1| PREDICTED: Bos taurus similar to dystonin, transcript variant 
1 (DST), mRNA
Length=16542

 Score = 86.3 bits (212),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 136/602 (22%), Positives = 250/602 (41%), Gaps = 81/602 (13%)
 Frame = +1

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  11914  ALGQFQHALDELLAWLTHTEGLLGEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  12093

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
                A  +L   ++ +EA ++  +++E +  +W  V E  + R+Q L+  L+          
Sbjct  12094  NKAGNDLIESSAGEEASSL-QNKLEVLNQRWQNVLEKTEQRKQHLDAALRQAKGFHGEIE  12270

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDAIQKKITETKQ-----LAK  168
              D  QWL   E    A + LG     AR +L +  E     D  ++      Q     LA+
Sbjct  12271  DLQQWLTDTERHLLASKPLGGLPETAREQLNAHLEICAAFDVKEETYKNLMQKGQQMLAR  12450

Query  169    DLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETH  228
                +  +TN+D   D+                     N+   W S+  +++ER+  LEE  
Sbjct  12451  CPKSAETNID--QDI--------------------NNLKEKWESVETKLNERKVKLEEAL  12564

Query  229    RLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAH  288
               L  +F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H
Sbjct  12565  TLAMEFHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSH  12726

Query  289    TDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWK  348
               +    LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K
Sbjct  12727  REQIIELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDEARKRAK  12903

Query  349    RLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLET  408
              + H +  +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T
Sbjct  12904  QFHDAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTSRT  13083

Query  409    VRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRK  468
                                  R L  +    +    L     E+  +W+ +   S + Q K
Sbjct  13084  -------------------GRSLKEKTTLADDNLKLDDMLSELRDKWDTICGKSVERQNK  13206

Query  469    IDETLERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAP  527
              ++E L    +  +A   L   L + E      QPV GD  ID + + ++  K  + E+  
Sbjct  13207  LEEALLFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKVFQKELGK  13380

Query  528    LKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHE  580
                 +V  +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E
Sbjct  13381  RTSSVQALKRSARELIEGNQDDSSWVRVQVQELSTRWETVCALSISKQSRLEAALRQAEE  13560

Query  581    AH  582
               H
Sbjct  13561  FH  13566


 Score = 62.0 bits (149),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 85/391 (21%), Positives = 174/391 (44%), Gaps = 12/391 (3%)
 Frame = +1

Query  14     DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITA  73
              +F+ +  +  +WL+  +Q +         L+ +   I + K    ++   R Q+ EL   
Sbjct  12577  EFHNSLQDFINWLTQAEQTLNVASRPSLILDTVLFQIDEHKVFANEVNSHREQIIELDKT  12756

Query  74     AQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAE  133
                +LK  +  Q+   +I + +  +Q++W++V + L  R + L+E  K + Q+ +A  +  
Sbjct  12757  GTHLKYFSQKQDV-VLIKNLLISVQSRWEKVVQRLVERGRSLDEARKRAKQFHDAWSKLM  12933

Query  134    QVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS-  192
              + L ++   L+S  E     D I+ ++ + K+  K L    +  D  +     L    + 
Sbjct  12934  EWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTSRTGRSLKEKTTL  13113

Query  193    ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA  252
              ADD  K+  +   +   W +I  +  ER+  LEE      QF   L+  + WL   E   
Sbjct  13114  ADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALIDWLYRVE--P  13287

Query  253    NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGS-DD  311
               + +D    + +  D   V  L+   +  Q E+   T     L  ++++++   EG+ DD
Sbjct  13288  QLAED----QPVHGDIDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELI---EGNQDD  13446

Query  312    AVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQ  371
              +  ++ ++  ++ +W  +   S++ +S LEA+  Q +  H  +  LL WL   +  L   
Sbjct  13447  SSWVRVQVQELSTRWETVCALSISKQSRLEAALRQAEEFHSVVHALLEWLAEAEQTLRFH  13626

Query  372    APIGGDFPAVQKQNDVHRAFKRELKTKEPVI  402
                +  D  A++   D H+ F + L+ K   +
Sbjct  13627  GVLPDDEDALRTLIDQHKEFMKRLEEKRAAL  13719


 Score = 48.1 bits (113),  Expect = 0.033, Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 144/353 (40%), Gaps = 50/353 (14%)
 Frame = +1

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +   Q
Sbjct  11416  QEELDMVINLGSELIAACGEPDKPIVKKSIDELNSAWDSLNKAWKDRVDRLEEAMQTAVQ  11595

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHTDV  291
              +   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE     
Sbjct  11596  YQDGLQALFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE-----  11751

Query  292    YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                 L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +  
Sbjct  11752  MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQ  11931

Query  352    LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
               +L ELL WL   +  L  Q P+GGD  A++ +   H   + ++   +    ST+E V  
Sbjct  11932  HALDELLAWLTHTEGLLGEQKPVGGDPKAIEIELAKHHVLQNDVLAHQ----STVEAVN-  12096

Query  412    FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQA-EEVNTEWEKLNLHSADWQRKID  470
                                      +A N   L+   A EE ++   KL + +  WQ  ++
Sbjct  12097  ------------------------KAGN--DLIESSAGEEASSLQNKLEVLNQRWQNVLE  12198

Query  471    ETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRG  523
              +T +R Q        LD  LRQA+   G  + +   L D+ + HL   K L G
Sbjct  12199  KTEQRKQ-------HLDAALRQAKGFHGEIEDLQQWLTDT-ERHLLASKPLGG  12333


 Score = 47.8 bits (112),  Expect = 0.042, Method: Compositional matrix adjust.
 Identities = 59/282 (20%), Positives = 127/282 (45%), Gaps = 17/282 (6%)
 Frame = +1

Query  57    MQDLEQRRPQLEELITAAQNLKNKTSNQEA-RTIITDRIERIQNQWDEVQEHLQNRRQQL  115
             +Q+ + R+PQ E+L TA + +  +     +    + +++  +  +WD +   L++R  ++
Sbjct  6796  LQEFDTRKPQYEQLTTAGRGILQRPGEHPSLHGTVKEQLAAVTQKWDSLTGQLRDRCDRI  6975

Query  116   NEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQT  175
             ++ +  STQ+        + L     +L S   G    DA+ +++   ++L + + Q   
Sbjct  6976  DQAVGKSTQYQSLLRSLSEKLADLDDQLSSSVAGSPHPDAMSQQLETAQKLKQAVEQEGK  7155

Query  176   NVDVA----NDLALKLLRDY-SADDTRKVHMITENINASWRSIHKRVSEREAALEETHRL  230
              +  A    +DLA  +  +Y  A+ +R++  + ++     +     V   ++A   +H+ 
Sbjct  7156  RISAAQALGDDLAALVREEYLRAELSRQLEGVLKSFKDLEQKAETHVEHLQSACASSHQ-  7332

Query  231   LQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTD  290
              QQ   D   F AWL   +   N     + K  +LE       L+K  +D +  + A + 
Sbjct  7333  FQQMSRD---FQAWLDTKKEEQNKSPLISAKVDVLES------LVKDQKDFRKTLTAQSH  7485

Query  291   VYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKK  332
             +Y       + +L   +GS + V LQ +L+ +   W  L+K+
Sbjct  7486  LYEKTIAEGENLLLKTQGS-EKVALQLQLNTIKTNWDGLQKQ  7608


 Score = 43.5 bits (101),  Expect = 0.78, Method: Compositional matrix adjust.
 Identities = 70/345 (20%), Positives = 160/345 (46%), Gaps = 16/345 (4%)
 Frame = +1

Query  54    KATMQDLEQRRPQLEELITAAQNLKNKTS-NQEARTIITDRIERIQNQWDEVQEHLQNRR  112
             KA  ++++Q    +E+L  AA +L      +QE   ++ +  E +  + D V E +  ++
Sbjct  7774  KALQKEMDQHFGLVEQLSGAAGSLLGVCEVDQE---VVAEERECLLRKVDTVTEQVHRKK  7944

Query  113   QQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLR  171
               L  M +   ++ E   EA++ L  A+ +L      GP    +    + +T+Q  K L+
Sbjct  7945  FSLENMAQKFKEFQEVSREAQRQLQGAKDQLAVHDSLGPQAHSSKSLTVLQTQQ--KALQ  8118

Query  172   QWQTNVDVANDLALKLLRDYS-ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRL  230
               ++ VD+A  LA  L+ + S +  T ++ +  E +     S+ ++V ++ + LE   + 
Sbjct  8119  TLKSQVDLAQGLARDLVAEASDSKGTSEILLQAETLAQEHDSLSQQVDDKCSFLETKLQG  8298

Query  231   LQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSK-GVKELMKQWQDLQGEIEAHT  289
             +  F   + +  +   E +   + +    R    L+  K  ++  +++       ++A  
Sbjct  8299  IGHFQNTIREMFSQFAEFDDELDGMAPVGRDAETLQKQKEAIRAFLEK-------LDALI  8457

Query  290   DVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKR  349
                 N ++  + +L + E S D V ++R L+ ++ + ++L  ++   +  +E +  + + 
Sbjct  8458  ANNANANKTCKMMLATEEASPDLVGIKRDLEALSKQCNKLWDRAQARKEQVEGTIVRLEE  8637

Query  350   LHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRE  394
              +  LQE    LQ  ++    Q P+G +   + +Q DV + F++E
Sbjct  8638  FYSKLQEFSTLLQKAEELEESQGPVGMETETINQQLDVFKVFQKE  8772


>ref|XM_615341.3| PREDICTED: Bos taurus similar to dystonin, transcript variant 
2 (DST), mRNA
Length=17520

 Score = 86.3 bits (212),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 136/602 (22%), Positives = 250/602 (41%), Gaps = 81/602 (13%)
 Frame = +1

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  12892  ALGQFQHALDELLAWLTHTEGLLGEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  13071

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
                A  +L   ++ +EA ++  +++E +  +W  V E  + R+Q L+  L+          
Sbjct  13072  NKAGNDLIESSAGEEASSL-QNKLEVLNQRWQNVLEKTEQRKQHLDAALRQAKGFHGEIE  13248

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDAIQKKITETKQ-----LAK  168
              D  QWL   E    A + LG     AR +L +  E     D  ++      Q     LA+
Sbjct  13249  DLQQWLTDTERHLLASKPLGGLPETAREQLNAHLEICAAFDVKEETYKNLMQKGQQMLAR  13428

Query  169    DLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETH  228
                +  +TN+D   D+                     N+   W S+  +++ER+  LEE  
Sbjct  13429  CPKSAETNID--QDI--------------------NNLKEKWESVETKLNERKVKLEEAL  13542

Query  229    RLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAH  288
               L  +F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H
Sbjct  13543  TLAMEFHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSH  13704

Query  289    TDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWK  348
               +    LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K
Sbjct  13705  REQIIELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDEARKRAK  13881

Query  349    RLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLET  408
              + H +  +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T
Sbjct  13882  QFHDAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTSRT  14061

Query  409    VRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRK  468
                                  R L  +    +    L     E+  +W+ +   S + Q K
Sbjct  14062  -------------------GRSLKEKTTLADDNLKLDDMLSELRDKWDTICGKSVERQNK  14184

Query  469    IDETLERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAP  527
              ++E L    +  +A   L   L + E      QPV GD  ID + + ++  K  + E+  
Sbjct  14185  LEEALLFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKVFQKELGK  14358

Query  528    LKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHE  580
                 +V  +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E
Sbjct  14359  RTSSVQALKRSARELIEGNQDDSSWVRVQVQELSTRWETVCALSISKQSRLEAALRQAEE  14538

Query  581    AH  582
               H
Sbjct  14539  FH  14544


 Score = 62.0 bits (149),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 85/391 (21%), Positives = 174/391 (44%), Gaps = 12/391 (3%)
 Frame = +1

Query  14     DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITA  73
              +F+ +  +  +WL+  +Q +         L+ +   I + K    ++   R Q+ EL   
Sbjct  13555  EFHNSLQDFINWLTQAEQTLNVASRPSLILDTVLFQIDEHKVFANEVNSHREQIIELDKT  13734

Query  74     AQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAE  133
                +LK  +  Q+   +I + +  +Q++W++V + L  R + L+E  K + Q+ +A  +  
Sbjct  13735  GTHLKYFSQKQDV-VLIKNLLISVQSRWEKVVQRLVERGRSLDEARKRAKQFHDAWSKLM  13911

Query  134    QVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS-  192
              + L ++   L+S  E     D I+ ++ + K+  K L    +  D  +     L    + 
Sbjct  13912  EWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTSRTGRSLKEKTTL  14091

Query  193    ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTA  252
              ADD  K+  +   +   W +I  +  ER+  LEE      QF   L+  + WL   E   
Sbjct  14092  ADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALIDWLYRVE--P  14265

Query  253    NVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGS-DD  311
               + +D    + +  D   V  L+   +  Q E+   T     L  ++++++   EG+ DD
Sbjct  14266  QLAED----QPVHGDIDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELI---EGNQDD  14424

Query  312    AVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQ  371
              +  ++ ++  ++ +W  +   S++ +S LEA+  Q +  H  +  LL WL   +  L   
Sbjct  14425  SSWVRVQVQELSTRWETVCALSISKQSRLEAALRQAEEFHSVVHALLEWLAEAEQTLRFH  14604

Query  372    APIGGDFPAVQKQNDVHRAFKRELKTKEPVI  402
                +  D  A++   D H+ F + L+ K   +
Sbjct  14605  GVLPDDEDALRTLIDQHKEFMKRLEEKRAAL  14697


 Score = 48.1 bits (113),  Expect = 0.033, Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 144/353 (40%), Gaps = 50/353 (14%)
 Frame = +1

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +   Q
Sbjct  12394  QEELDMVINLGSELIAACGEPDKPIVKKSIDELNSAWDSLNKAWKDRVDRLEEAMQTAVQ  12573

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHTDV  291
              +   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE     
Sbjct  12574  YQDGLQALFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE-----  12729

Query  292    YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                 L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +  
Sbjct  12730  MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQ  12909

Query  352    LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
               +L ELL WL   +  L  Q P+GGD  A++ +   H   + ++   +    ST+E V  
Sbjct  12910  HALDELLAWLTHTEGLLGEQKPVGGDPKAIEIELAKHHVLQNDVLAHQ----STVEAVN-  13074

Query  412    FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQA-EEVNTEWEKLNLHSADWQRKID  470
                                      +A N   L+   A EE ++   KL + +  WQ  ++
Sbjct  13075  ------------------------KAGN--DLIESSAGEEASSLQNKLEVLNQRWQNVLE  13176

Query  471    ETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRG  523
              +T +R Q        LD  LRQA+   G  + +   L D+ + HL   K L G
Sbjct  13177  KTEQRKQ-------HLDAALRQAKGFHGEIEDLQQWLTDT-ERHLLASKPLGG  13311


 Score = 47.8 bits (112),  Expect = 0.042, Method: Compositional matrix adjust.
 Identities = 59/282 (20%), Positives = 127/282 (45%), Gaps = 17/282 (6%)
 Frame = +1

Query  57    MQDLEQRRPQLEELITAAQNLKNKTSNQEA-RTIITDRIERIQNQWDEVQEHLQNRRQQL  115
             +Q+ + R+PQ E+L TA + +  +     +    + +++  +  +WD +   L++R  ++
Sbjct  7774  LQEFDTRKPQYEQLTTAGRGILQRPGEHPSLHGTVKEQLAAVTQKWDSLTGQLRDRCDRI  7953

Query  116   NEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQT  175
             ++ +  STQ+        + L     +L S   G    DA+ +++   ++L + + Q   
Sbjct  7954  DQAVGKSTQYQSLLRSLSEKLADLDDQLSSSVAGSPHPDAMSQQLETAQKLKQAVEQEGK  8133

Query  176   NVDVA----NDLALKLLRDY-SADDTRKVHMITENINASWRSIHKRVSEREAALEETHRL  230
              +  A    +DLA  +  +Y  A+ +R++  + ++     +     V   ++A   +H+ 
Sbjct  8134  RISAAQALGDDLAALVREEYLRAELSRQLEGVLKSFKDLEQKAETHVEHLQSACASSHQ-  8310

Query  231   LQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTD  290
              QQ   D   F AWL   +   N     + K  +LE       L+K  +D +  + A + 
Sbjct  8311  FQQMSRD---FQAWLDTKKEEQNKSPLISAKVDVLES------LVKDQKDFRKTLTAQSH  8463

Query  291   VYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKK  332
             +Y       + +L   +GS + V LQ +L+ +   W  L+K+
Sbjct  8464  LYEKTIAEGENLLLKTQGS-EKVALQLQLNTIKTNWDGLQKQ  8586


 Score = 43.5 bits (101),  Expect = 0.78, Method: Compositional matrix adjust.
 Identities = 70/345 (20%), Positives = 160/345 (46%), Gaps = 16/345 (4%)
 Frame = +1

Query  54    KATMQDLEQRRPQLEELITAAQNLKNKTS-NQEARTIITDRIERIQNQWDEVQEHLQNRR  112
             KA  ++++Q    +E+L  AA +L      +QE   ++ +  E +  + D V E +  ++
Sbjct  8752  KALQKEMDQHFGLVEQLSGAAGSLLGVCEVDQE---VVAEERECLLRKVDTVTEQVHRKK  8922

Query  113   QQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKE-GPYTVDAIQKKITETKQLAKDLR  171
               L  M +   ++ E   EA++ L  A+ +L      GP    +    + +T+Q  K L+
Sbjct  8923  FSLENMAQKFKEFQEVSREAQRQLQGAKDQLAVHDSLGPQAHSSKSLTVLQTQQ--KALQ  9096

Query  172   QWQTNVDVANDLALKLLRDYS-ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRL  230
               ++ VD+A  LA  L+ + S +  T ++ +  E +     S+ ++V ++ + LE   + 
Sbjct  9097  TLKSQVDLAQGLARDLVAEASDSKGTSEILLQAETLAQEHDSLSQQVDDKCSFLETKLQG  9276

Query  231   LQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSK-GVKELMKQWQDLQGEIEAHT  289
             +  F   + +  +   E +   + +    R    L+  K  ++  +++       ++A  
Sbjct  9277  IGHFQNTIREMFSQFAEFDDELDGMAPVGRDAETLQKQKEAIRAFLEK-------LDALI  9435

Query  290   DVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKR  349
                 N ++  + +L + E S D V ++R L+ ++ + ++L  ++   +  +E +  + + 
Sbjct  9436  ANNANANKTCKMMLATEEASPDLVGIKRDLEALSKQCNKLWDRAQARKEQVEGTIVRLEE  9615

Query  350   LHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRE  394
              +  LQE    LQ  ++    Q P+G +   + +Q DV + F++E
Sbjct  9616  FYSKLQEFSTLLQKAEELEESQGPVGMETETINQQLDVFKVFQKE  9750


>ref|XM_861695.1| PREDICTED: Canis familiaris dystonin, transcript variant 14 (DST), 
mRNA
Length=17884

 Score = 86.3 bits (212),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 136/597 (22%), Positives = 249/597 (41%), Gaps = 72/597 (12%)
 Frame = +3

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  13266  ALGQFQHALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  13445

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
                A  +L   ++ +EA  +  +++E +  +W  V E  + R+QQL+  L+          
Sbjct  13446  NKAGNDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIE  13622

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQW  173
              D  QWL   E    A + LG     AR +L +  E     D         +++ K L Q 
Sbjct  13623  DLHQWLTDTERHLLASKPLGGLPETAREQLNAHMEICAAFDV-------KEEIYKSLMQK  13781

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
                 +         L R   + +T  +     N+   W S+  +++ER+  LEE   L  +
Sbjct  13782  GQQM---------LARCPKSAET--IDQDLNNLKEKWESVETKLNERKTKLEEALNLAME  13928

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYH  293
              F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H +   
Sbjct  13929  FHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSHREQII  14090

Query  294    NLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLS  353
               LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K+ H +
Sbjct  14091  ELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAKQFHEA  14267

Query  354    LQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFL  413
                +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T     
Sbjct  14268  WSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRT-----  14432

Query  414    TEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETL  473
                             R L  +    +    L     E+  +W+ +   S + Q K++E L
Sbjct  14433  --------------GRSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEAL  14570

Query  474    ERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAPLKENV  532
                  +  +A   L   L + E      QPV GD  ID + + ++  K  + E+     +V
Sbjct  14571  LFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKVFQKELGKRTSSV  14744

Query  533    SHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHEAH  582
                +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E H
Sbjct  14745  QALKRSARELIEGSRDDSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFH  14915


 Score = 62.0 bits (149),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 166/389 (42%), Gaps = 23/389 (5%)
 Frame = +3

Query  22     LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
              + DW+ +    + S   +  DLE + + I + K    +  Q++ ++E L   A+ L  K 
Sbjct  12969  IFDWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIEMERLNHQAELLLKKV  13148

Query  82     SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
              + +  +  + D +  ++  WD + E + NR+ +L   L    Q+  A +E    L     
Sbjct  13149  TEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQHALDELLTWLTHTEG  13328

Query  142    KLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHM  201
               L   K       AI+ ++ +   L  D+   Q+ V+  N     L+   + ++   +  
Sbjct  13329  LLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAVNKAGNDLIESSAGEEASNLQN  13508

Query  202    ITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK  261
                E +N  W+++ ++  +R+  L+   R  + F  ++E    WLT+              
Sbjct  13509  KLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIEDLHQWLTDT-------------  13649

Query  262    ERLLEDSK---GVKELMKQWQDLQGEIEAHTDV----YHNLDENSQKILRSLEGSDDAVL  314
              ER L  SK   G+ E  ++  +   EI A  DV    Y +L +  Q++L     S  A  
Sbjct  13650  ERHLLASKPLGGLPETAREQLNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKS--AET  13823

Query  315    LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPI  374
              + + L+N+  KW  +  K    ++ LE + +     H SLQ+ + WL   +  L+  +  
Sbjct  13824  IDQDLNNLKEKWESVETKLNERKTKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRP  14003

Query  375    GGDFPAVQKQNDVHRAFKRELKT-KEPVI  402
                    V  Q D H+ F  E+ + +E +I
Sbjct  14004  SLILDTVLFQIDEHKVFANEVNSHREQII  14090


 Score = 60.8 bits (146),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 140/566 (24%), Positives = 241/566 (42%), Gaps = 84/566 (14%)
 Frame = +3

Query  45     DINEMIIK-QKATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDE  103
              D+ E ++K QK   + L  +    E+ I   +NL  KT   E +  +  ++  I+  WD 
Sbjct  8766   DVLESLLKDQKDFSKMLSAQSSIYEKTIAEGENLLLKTQGSE-KAALQSQLNTIKTSWDG  8942

Query  104    VQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKK--IT  161
                + ++ R  ++ + L+ + ++ E  E     + + +  LE  K   + +D  + +    
Sbjct  8943   FNKQVKEREDKVKDSLEKALKYKEHVETLRPWIDKCQNNLEEIK---FCLDPTETENSTA  9113

Query  162    ETKQLAKDLRQWQTNVDVANDLALKLL------RDYSADDTR----KVHMITENINA---  208
                K L K++ Q    V++ N+ A  LL      ++   D+ +    K+ M+TE +++   
Sbjct  9114   RLKSLQKEMNQHLGMVELLNNAANSLLSVCEVDKEVITDENKSLIQKIDMVTEQLHSKKF  9293

Query  209    SWRSIHKRVSEREAALEETHRLLQ--QFPLDLEKFLAWLTEAETTANVLQDATRKERLLE  266
              S  ++ ++  E +   +E  R LQ  +  LD+   L     +    +VLQ          
Sbjct  9294   SLENMAQKFKEFQEVSKEAKRQLQCAKEQLDVHDSLGPQAYSNKYLSVLQT---------  9446

Query  267    DSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKW  326
                KG++ L  Q            D+   L ++        +G+ D VLLQ   +++  + 
Sbjct  9447   QQKGLQTLKHQ-----------VDLVKGLAQDLVVEASDSKGTSD-VLLQS--ESLVQEH  9584

Query  327    SELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQND  386
              S L ++     S LE           +++E+       DDEL   AP+G D   +QKQ +
Sbjct  9585   SALSQQVDERCSFLETKLQGIGHFQNTIREMFSQFAEFDDELDSMAPVGRDVETLQKQKE  9764

Query  387    VHRAFKRELKTKEPVIMS---TLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRL  443
                +AF   LK  E +I S     +T ++ L  +  E    L    R+L  E  ++   +L
Sbjct  9765   AIKAF---LKKLEALIASNDNANKTCKMMLAME--ETSPDLIGIKRDL--EALSKQCNKL  9923

Query  444    L-RKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQP  502
              L R QA E                 +++ T+ERL+E      E    L++AE  + S  P
Sbjct  9924   LDRAQARE----------------EQVEGTIERLEEFYSKLKEFSTLLQKAEEHEESQGP  10055

Query  503    VGDLLIDSLQDHLEKVKAL-RGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLST-----  556
              VG +  +++   L   KA  + EI PL+     VN L + L    IQ +    ST     
Sbjct  10056  VG-METETINQQLNVFKAFQKEEIEPLQVKQQDVNWLGQGL----IQSAAKGTSTQGLEH  10220

Query  557    -LEDLNTRWKLLQVAVEDRVRQLHEA  581
               L+D+N RWK L   V  R  QL EA
Sbjct  10221  DLDDVNARWKTLNKKVAQRAAQLQEA  10298


 Score = 52.0 bits (123),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 97/443 (21%), Positives = 181/443 (40%), Gaps = 68/443 (15%)
 Frame = +3

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +   Q
Sbjct  12768  QEELDMVINLGSELIAACGEPDKPIVKKSIDELNSAWESLNKAWKDRVDKLEEAMQAAVQ  12947

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHTDV  291
              +   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE     
Sbjct  12948  YQDGLQAIFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE-----  13103

Query  292    YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                 L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +  
Sbjct  13104  MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQ  13283

Query  352    LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
               +L ELL WL   +  LS Q P+GGD  A++ +   H   + +                +
Sbjct  13284  HALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQND----------------V  13415

Query  412    FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
                 +  +E + K   +  E    E A N+                KL + +  WQ  +++
Sbjct  13416  LAHQSTVEAVNKAGNDLIESSAGEEASNLQN--------------KLEVLNQRWQNVLEK  13553

Query  472    TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKEN  531
              T +R Q       +LD  LRQA+   G  + +   L D+ + HL   K L G     +E 
Sbjct  13554  TEQRKQ-------QLDGALRQAKGFHGEIEDLHQWLTDT-ERHLLASKPLGGLPETAREQ  13709

Query  532    V-SHV---------NDLARQLTTLGIQL---SPYNLSTL-EDLNT---RWKLLQVAVEDR  574
              + +H+          ++ + L   G Q+    P +  T+ +DLN    +W+ ++  + +R
Sbjct  13710  LNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKSAETIDQDLNNLKEKWESVETKLNER  13889

Query  575    VRQLHEA---HRDFGPASQHFLS  594
                +L EA     +F  + Q F++
Sbjct  13890  KTKLEEALNLAMEFHNSLQDFIN  13958


 Score = 50.1 bits (118),  Expect = 0.007, Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 106/237 (44%), Gaps = 1/237 (0%)
 Frame = +3

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW++L +WL   ++ + S+  +  D + I   + + K   + L  +    +      
Sbjct  14256  FHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTG  14435

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              ++LK KTS  +    + D +  ++++WD +      R+ +L E L  S Q+ +A +    
Sbjct  14436  RSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALID  14615

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   I   K   K+L +  ++V      A +L+ + S D
Sbjct  14616  WLYRVEPQLAEDQPVHGDIDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELI-EGSRD  14792

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT  251
              D+  V +  + ++  W ++      ++  LE   R  ++F   +   L WL EAE T
Sbjct  14793  DSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQT  14963


 Score = 49.7 bits (117),  Expect = 0.011, Method: Compositional matrix adjust.
 Identities = 102/506 (20%), Positives = 211/506 (41%), Gaps = 52/506 (10%)
 Frame = +3

Query  87     RTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESW  146
              + +ITD  + +  + D V E L +++  L  M +   ++ E  +EA++ L  A+ +L+  
Sbjct  9213   KEVITDENKSLIQKIDMVTEQLHSKKFSLENMAQKFKEFQEVSKEAKRQLQCAKEQLDVH  9392

Query  147    KE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS-ADDTRKVHMITE  204
                 GP         + +T+Q  K L+  +  VD+   LA  L+ + S +  T  V + +E
Sbjct  9393   DSLGPQAYSNKYLSVLQTQQ--KGLQTLKHQVDLVKGLAQDLVVEASDSKGTSDVLLQSE  9566

Query  205    NINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK-ER  263
              ++     ++ ++V ER + LE   + +  F   + +  +   E +   + +    R  E 
Sbjct  9567   SLVQEHSALSQQVDERCSFLETKLQGIGHFQNTIREMFSQFAEFDDELDSMAPVGRDVET  9746

Query  264    LLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMN  323
              L +  + +K  +K+       +EA      N ++  + +L   E S D + ++R L+ ++
Sbjct  9747   LQKQKEAIKAFLKK-------LEALIASNDNANKTCKMMLAMEETSPDLIGIKRDLEALS  9905

Query  324    FKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQK  383
               + ++L  ++      +E + ++ +  +  L+E    LQ  ++    Q P+G +   + +
Sbjct  9906   KQCNKLLDRAQAREEQVEGTIERLEEFYSKLKEFSTLLQKAEEHEESQGPVGMETETINQ  10085

Query  384    QNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRL  443
              Q +V +AF++E      V    +  +   L +   +G                    T+ 
Sbjct  10086  QLNVFKAFQKEEIEPLQVKQQDVNWLGQGLIQSAAKG------------------TSTQG  10211

Query  444    LRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPV  503
              L    ++VN  W+ LN   A    ++ E L      Q+A + L            SW   
Sbjct  10212  LEHDLDDVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESL-----------LSWMVD  10358

Query  504    GDLLIDSLQDHLEKVKALRGEIAP-------LKENVSHVNDLARQLTTLGIQLSPYN---  553
               + L+ + +    + K ++ +I         L +  S V  + R+   +     P +   
Sbjct  10359  TEELVANQKPPSAEFKVVKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIAATAEPADKVK  10538

Query  554    -LSTLEDLNTRWKLLQVAVEDRVRQL  578
               L  L  L++RW+ L    E R RQL
Sbjct  10539  ILKQLSLLDSRWEALLNKAETRNRQL  10616


>emb|AJ544618.1| Takifugu rubripes utrn gene for putative utrophin, exons 1-54 
and joined CDS
Length=46600

 Score = 65.1 bits (157),  Expect(2) = 1e-13, Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 40/126 (31%)
 Frame = +3

Query  8      EVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDI---------------NEMIIK  52
              +  A  D N+  TEL+DWL L+ Q++KS  V VGD+E+I               N  +++
Sbjct  38802  DTVAPTDLNKTATELSDWLGLITQMLKSNIVTVGDIEEIRTTMGRLQVSILDVVNASLLR  38981

Query  53     Q-------------------------KATMQDLEQRRPQLEELITAAQNLKNKTSNQEAR  87
                                        + T  DLEQR  QLE++ T AQN+KNKTSN + R
Sbjct  38982  L*FCCVM*PAG*DLIPLCLCACPLCWQVTKNDLEQRHHQLEDIFTLAQNIKNKTSNLDVR  39161

Query  88     TIITDR  93
              T IT++
Sbjct  39162  TSITEK  39179


 Score = 41.2 bits (95),  Expect(2) = 1e-13, Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
 Frame = +2

Query  86     ARTIIT--DRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKL  143
               R I+T    +ER+++QWD  Q  ++ R QQL+ M+  S++W E ++E + ++G    + 
Sbjct  39269  CRLIVTHLSVVERVRSQWDGTQHGVEARLQQLDNMIGHSSRWEEQRKEVKALIGHHEGRF  39448

Query  144    ES  145
               +
Sbjct  39449  HN  39454


 Score = 53.1 bits (126),  Expect(2) = 3e-11, Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 0/62 (0%)
 Frame = +3

Query  216    RVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELM  275
              R ++R A L+   + LQ    +LE FL WL EAETT NVL DA+++E L +D+  VKEL 
Sbjct  40488  RATDRHAHLDSELKGLQMSLRELETFLKWLQEAETTVNVLADASQREDLSQDTAHVKELR  40667

Query  276    KQ  277
              +Q
Sbjct  40668  RQ  40673


 Score = 45.1 bits (105),  Expect(2) = 3e-11, Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 0/51 (0%)
 Frame = +2

Query  166    LAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKR  216
              L +DL + Q  V   N+L+  LL +YSADDTR++  +T+  NA W SI+ R
Sbjct  40217  LLQDLGRGQAAVAGFNELSAHLLHEYSADDTRRIKEVTDKHNAVWSSINNR  40369


>ref|XM_861613.1| PREDICTED: Canis familiaris dystonin, transcript variant 9 (DST), 
mRNA
Length=17755

 Score = 85.9 bits (211),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 136/597 (22%), Positives = 249/597 (41%), Gaps = 72/597 (12%)
 Frame = +3

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  13266  ALGQFQHALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  13445

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
                A  +L   ++ +EA  +  +++E +  +W  V E  + R+QQL+  L+          
Sbjct  13446  NKAGNDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIE  13622

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQW  173
              D  QWL   E    A + LG     AR +L +  E     D         +++ K L Q 
Sbjct  13623  DLHQWLTDTERHLLASKPLGGLPETAREQLNAHMEICAAFDV-------KEEIYKSLMQK  13781

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
                 +         L R   + +T  +     N+   W S+  +++ER+  LEE   L  +
Sbjct  13782  GQQM---------LARCPKSAET--IDQDLNNLKEKWESVETKLNERKTKLEEALNLAME  13928

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYH  293
              F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H +   
Sbjct  13929  FHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSHREQII  14090

Query  294    NLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLS  353
               LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K+ H +
Sbjct  14091  ELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAKQFHEA  14267

Query  354    LQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFL  413
                +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T     
Sbjct  14268  WSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRT-----  14432

Query  414    TEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETL  473
                             R L  +    +    L     E+  +W+ +   S + Q K++E L
Sbjct  14433  --------------GRSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEAL  14570

Query  474    ERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAPLKENV  532
                  +  +A   L   L + E      QPV GD  ID + + ++  K  + E+     +V
Sbjct  14571  LFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKVFQKELGKRTSSV  14744

Query  533    SHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHEAH  582
                +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E H
Sbjct  14745  QALKRSARELIEGSRDDSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFH  14915


 Score = 61.6 bits (148),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 166/389 (42%), Gaps = 23/389 (5%)
 Frame = +3

Query  22     LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
              + DW+ +    + S   +  DLE + + I + K    +  Q++ ++E L   A+ L  K 
Sbjct  12969  IFDWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIEMERLNHQAELLLKKV  13148

Query  82     SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
              + +  +  + D +  ++  WD + E + NR+ +L   L    Q+  A +E    L     
Sbjct  13149  TEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQHALDELLTWLTHTEG  13328

Query  142    KLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHM  201
               L   K       AI+ ++ +   L  D+   Q+ V+  N     L+   + ++   +  
Sbjct  13329  LLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAVNKAGNDLIESSAGEEASNLQN  13508

Query  202    ITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK  261
                E +N  W+++ ++  +R+  L+   R  + F  ++E    WLT+              
Sbjct  13509  KLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIEDLHQWLTDT-------------  13649

Query  262    ERLLEDSK---GVKELMKQWQDLQGEIEAHTDV----YHNLDENSQKILRSLEGSDDAVL  314
              ER L  SK   G+ E  ++  +   EI A  DV    Y +L +  Q++L     S  A  
Sbjct  13650  ERHLLASKPLGGLPETAREQLNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKS--AET  13823

Query  315    LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPI  374
              + + L+N+  KW  +  K    ++ LE + +     H SLQ+ + WL   +  L+  +  
Sbjct  13824  IDQDLNNLKEKWESVETKLNERKTKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRP  14003

Query  375    GGDFPAVQKQNDVHRAFKRELKT-KEPVI  402
                    V  Q D H+ F  E+ + +E +I
Sbjct  14004  SLILDTVLFQIDEHKVFANEVNSHREQII  14090


 Score = 60.8 bits (146),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 140/566 (24%), Positives = 241/566 (42%), Gaps = 84/566 (14%)
 Frame = +3

Query  45     DINEMIIK-QKATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDE  103
              D+ E ++K QK   + L  +    E+ I   +NL  KT   E +  +  ++  I+  WD 
Sbjct  8766   DVLESLLKDQKDFSKMLSAQSSIYEKTIAEGENLLLKTQGSE-KAALQSQLNTIKTSWDG  8942

Query  104    VQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKK--IT  161
                + ++ R  ++ + L+ + ++ E  E     + + +  LE  K   + +D  + +    
Sbjct  8943   FNKQVKEREDKVKDSLEKALKYKEHVETLRPWIDKCQNNLEEIK---FCLDPTETENSTA  9113

Query  162    ETKQLAKDLRQWQTNVDVANDLALKLL------RDYSADDTR----KVHMITENINA---  208
                K L K++ Q    V++ N+ A  LL      ++   D+ +    K+ M+TE +++   
Sbjct  9114   RLKSLQKEMNQHLGMVELLNNAANSLLSVCEVDKEVITDENKSLIQKIDMVTEQLHSKKF  9293

Query  209    SWRSIHKRVSEREAALEETHRLLQ--QFPLDLEKFLAWLTEAETTANVLQDATRKERLLE  266
              S  ++ ++  E +   +E  R LQ  +  LD+   L     +    +VLQ          
Sbjct  9294   SLENMAQKFKEFQEVSKEAKRQLQCAKEQLDVHDSLGPQAYSNKYLSVLQT---------  9446

Query  267    DSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKW  326
                KG++ L  Q            D+   L ++        +G+ D VLLQ   +++  + 
Sbjct  9447   QQKGLQTLKHQ-----------VDLVKGLAQDLVVEASDSKGTSD-VLLQS--ESLVQEH  9584

Query  327    SELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQND  386
              S L ++     S LE           +++E+       DDEL   AP+G D   +QKQ +
Sbjct  9585   SALSQQVDERCSFLETKLQGIGHFQNTIREMFSQFAEFDDELDSMAPVGRDVETLQKQKE  9764

Query  387    VHRAFKRELKTKEPVIMS---TLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRL  443
                +AF   LK  E +I S     +T ++ L  +  E    L    R+L  E  ++   +L
Sbjct  9765   AIKAF---LKKLEALIASNDNANKTCKMMLAME--ETSPDLIGIKRDL--EALSKQCNKL  9923

Query  444    L-RKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQP  502
              L R QA E                 +++ T+ERL+E      E    L++AE  + S  P
Sbjct  9924   LDRAQARE----------------EQVEGTIERLEEFYSKLKEFSTLLQKAEEHEESQGP  10055

Query  503    VGDLLIDSLQDHLEKVKAL-RGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLST-----  556
              VG +  +++   L   KA  + EI PL+     VN L + L    IQ +    ST     
Sbjct  10056  VG-METETINQQLNVFKAFQKEEIEPLQVKQQDVNWLGQGL----IQSAAKGTSTQGLEH  10220

Query  557    -LEDLNTRWKLLQVAVEDRVRQLHEA  581
               L+D+N RWK L   V  R  QL EA
Sbjct  10221  DLDDVNARWKTLNKKVAQRAAQLQEA  10298


 Score = 52.0 bits (123),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 97/443 (21%), Positives = 181/443 (40%), Gaps = 68/443 (15%)
 Frame = +3

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +   Q
Sbjct  12768  QEELDMVINLGSELIAACGEPDKPIVKKSIDELNSAWESLNKAWKDRVDKLEEAMQAAVQ  12947

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHTDV  291
              +   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE     
Sbjct  12948  YQDGLQAIFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE-----  13103

Query  292    YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                 L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +  
Sbjct  13104  MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQ  13283

Query  352    LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
               +L ELL WL   +  LS Q P+GGD  A++ +   H   + +                +
Sbjct  13284  HALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQND----------------V  13415

Query  412    FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
                 +  +E + K   +  E    E A N+                KL + +  WQ  +++
Sbjct  13416  LAHQSTVEAVNKAGNDLIESSAGEEASNLQN--------------KLEVLNQRWQNVLEK  13553

Query  472    TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKEN  531
              T +R Q       +LD  LRQA+   G  + +   L D+ + HL   K L G     +E 
Sbjct  13554  TEQRKQ-------QLDGALRQAKGFHGEIEDLHQWLTDT-ERHLLASKPLGGLPETAREQ  13709

Query  532    V-SHV---------NDLARQLTTLGIQL---SPYNLSTL-EDLNT---RWKLLQVAVEDR  574
              + +H+          ++ + L   G Q+    P +  T+ +DLN    +W+ ++  + +R
Sbjct  13710  LNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKSAETIDQDLNNLKEKWESVETKLNER  13889

Query  575    VRQLHEA---HRDFGPASQHFLS  594
                +L EA     +F  + Q F++
Sbjct  13890  KTKLEEALNLAMEFHNSLQDFIN  13958


 Score = 50.1 bits (118),  Expect = 0.008, Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 106/237 (44%), Gaps = 1/237 (0%)
 Frame = +3

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW++L +WL   ++ + S+  +  D + I   + + K   + L  +    +      
Sbjct  14256  FHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTG  14435

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              ++LK KTS  +    + D +  ++++WD +      R+ +L E L  S Q+ +A +    
Sbjct  14436  RSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALID  14615

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   I   K   K+L +  ++V      A +L+ + S D
Sbjct  14616  WLYRVEPQLAEDQPVHGDIDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELI-EGSRD  14792

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT  251
              D+  V +  + ++  W ++      ++  LE   R  ++F   +   L WL EAE T
Sbjct  14793  DSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQT  14963


 Score = 49.7 bits (117),  Expect = 0.012, Method: Compositional matrix adjust.
 Identities = 102/506 (20%), Positives = 211/506 (41%), Gaps = 52/506 (10%)
 Frame = +3

Query  87     RTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESW  146
              + +ITD  + +  + D V E L +++  L  M +   ++ E  +EA++ L  A+ +L+  
Sbjct  9213   KEVITDENKSLIQKIDMVTEQLHSKKFSLENMAQKFKEFQEVSKEAKRQLQCAKEQLDVH  9392

Query  147    KE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS-ADDTRKVHMITE  204
                 GP         + +T+Q  K L+  +  VD+   LA  L+ + S +  T  V + +E
Sbjct  9393   DSLGPQAYSNKYLSVLQTQQ--KGLQTLKHQVDLVKGLAQDLVVEASDSKGTSDVLLQSE  9566

Query  205    NINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK-ER  263
              ++     ++ ++V ER + LE   + +  F   + +  +   E +   + +    R  E 
Sbjct  9567   SLVQEHSALSQQVDERCSFLETKLQGIGHFQNTIREMFSQFAEFDDELDSMAPVGRDVET  9746

Query  264    LLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMN  323
              L +  + +K  +K+       +EA      N ++  + +L   E S D + ++R L+ ++
Sbjct  9747   LQKQKEAIKAFLKK-------LEALIASNDNANKTCKMMLAMEETSPDLIGIKRDLEALS  9905

Query  324    FKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQK  383
               + ++L  ++      +E + ++ +  +  L+E    LQ  ++    Q P+G +   + +
Sbjct  9906   KQCNKLLDRAQAREEQVEGTIERLEEFYSKLKEFSTLLQKAEEHEESQGPVGMETETINQ  10085

Query  384    QNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRL  443
              Q +V +AF++E      V    +  +   L +   +G                    T+ 
Sbjct  10086  QLNVFKAFQKEEIEPLQVKQQDVNWLGQGLIQSAAKG------------------TSTQG  10211

Query  444    LRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPV  503
              L    ++VN  W+ LN   A    ++ E L      Q+A + L            SW   
Sbjct  10212  LEHDLDDVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESL-----------LSWMVD  10358

Query  504    GDLLIDSLQDHLEKVKALRGEIAP-------LKENVSHVNDLARQLTTLGIQLSPYN---  553
               + L+ + +    + K ++ +I         L +  S V  + R+   +     P +   
Sbjct  10359  TEELVANQKPPSAEFKVVKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIAATAEPADKVK  10538

Query  554    -LSTLEDLNTRWKLLQVAVEDRVRQL  578
               L  L  L++RW+ L    E R RQL
Sbjct  10539  ILKQLSLLDSRWEALLNKAETRNRQL  10616


>ref|XM_861601.1| PREDICTED: Canis familiaris dystonin, transcript variant 8 (DST), 
mRNA
Length=17710

 Score = 85.9 bits (211),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 136/597 (22%), Positives = 249/597 (41%), Gaps = 72/597 (12%)
 Frame = +3

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  13221  ALGQFQHALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  13400

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
                A  +L   ++ +EA  +  +++E +  +W  V E  + R+QQL+  L+          
Sbjct  13401  NKAGNDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIE  13577

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQW  173
              D  QWL   E    A + LG     AR +L +  E     D         +++ K L Q 
Sbjct  13578  DLHQWLTDTERHLLASKPLGGLPETAREQLNAHMEICAAFDV-------KEEIYKSLMQK  13736

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
                 +         L R   + +T  +     N+   W S+  +++ER+  LEE   L  +
Sbjct  13737  GQQM---------LARCPKSAET--IDQDLNNLKEKWESVETKLNERKTKLEEALNLAME  13883

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYH  293
              F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H +   
Sbjct  13884  FHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSHREQII  14045

Query  294    NLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLS  353
               LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K+ H +
Sbjct  14046  ELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAKQFHEA  14222

Query  354    LQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFL  413
                +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T     
Sbjct  14223  WSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRT-----  14387

Query  414    TEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETL  473
                             R L  +    +    L     E+  +W+ +   S + Q K++E L
Sbjct  14388  --------------GRSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEAL  14525

Query  474    ERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAPLKENV  532
                  +  +A   L   L + E      QPV GD  ID + + ++  K  + E+     +V
Sbjct  14526  LFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKVFQKELGKRTSSV  14699

Query  533    SHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHEAH  582
                +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E H
Sbjct  14700  QALKRSARELIEGSRDDSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFH  14870


 Score = 61.6 bits (148),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 166/389 (42%), Gaps = 23/389 (5%)
 Frame = +3

Query  22     LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
              + DW+ +    + S   +  DLE + + I + K    +  Q++ ++E L   A+ L  K 
Sbjct  12924  IFDWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIEMERLNHQAELLLKKV  13103

Query  82     SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
              + +  +  + D +  ++  WD + E + NR+ +L   L    Q+  A +E    L     
Sbjct  13104  TEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQHALDELLTWLTHTEG  13283

Query  142    KLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHM  201
               L   K       AI+ ++ +   L  D+   Q+ V+  N     L+   + ++   +  
Sbjct  13284  LLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAVNKAGNDLIESSAGEEASNLQN  13463

Query  202    ITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK  261
                E +N  W+++ ++  +R+  L+   R  + F  ++E    WLT+              
Sbjct  13464  KLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIEDLHQWLTDT-------------  13604

Query  262    ERLLEDSK---GVKELMKQWQDLQGEIEAHTDV----YHNLDENSQKILRSLEGSDDAVL  314
              ER L  SK   G+ E  ++  +   EI A  DV    Y +L +  Q++L     S  A  
Sbjct  13605  ERHLLASKPLGGLPETAREQLNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKS--AET  13778

Query  315    LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPI  374
              + + L+N+  KW  +  K    ++ LE + +     H SLQ+ + WL   +  L+  +  
Sbjct  13779  IDQDLNNLKEKWESVETKLNERKTKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRP  13958

Query  375    GGDFPAVQKQNDVHRAFKRELKT-KEPVI  402
                    V  Q D H+ F  E+ + +E +I
Sbjct  13959  SLILDTVLFQIDEHKVFANEVNSHREQII  14045


 Score = 60.8 bits (146),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 140/566 (24%), Positives = 241/566 (42%), Gaps = 84/566 (14%)
 Frame = +3

Query  45     DINEMIIK-QKATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDE  103
              D+ E ++K QK   + L  +    E+ I   +NL  KT   E +  +  ++  I+  WD 
Sbjct  8721   DVLESLLKDQKDFSKMLSAQSSIYEKTIAEGENLLLKTQGSE-KAALQSQLNTIKTSWDG  8897

Query  104    VQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKK--IT  161
                + ++ R  ++ + L+ + ++ E  E     + + +  LE  K   + +D  + +    
Sbjct  8898   FNKQVKEREDKVKDSLEKALKYKEHVETLRPWIDKCQNNLEEIK---FCLDPTETENSTA  9068

Query  162    ETKQLAKDLRQWQTNVDVANDLALKLL------RDYSADDTR----KVHMITENINA---  208
                K L K++ Q    V++ N+ A  LL      ++   D+ +    K+ M+TE +++   
Sbjct  9069   RLKSLQKEMNQHLGMVELLNNAANSLLSVCEVDKEVITDENKSLIQKIDMVTEQLHSKKF  9248

Query  209    SWRSIHKRVSEREAALEETHRLLQ--QFPLDLEKFLAWLTEAETTANVLQDATRKERLLE  266
              S  ++ ++  E +   +E  R LQ  +  LD+   L     +    +VLQ          
Sbjct  9249   SLENMAQKFKEFQEVSKEAKRQLQCAKEQLDVHDSLGPQAYSNKYLSVLQT---------  9401

Query  267    DSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKW  326
                KG++ L  Q            D+   L ++        +G+ D VLLQ   +++  + 
Sbjct  9402   QQKGLQTLKHQ-----------VDLVKGLAQDLVVEASDSKGTSD-VLLQS--ESLVQEH  9539

Query  327    SELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQND  386
              S L ++     S LE           +++E+       DDEL   AP+G D   +QKQ +
Sbjct  9540   SALSQQVDERCSFLETKLQGIGHFQNTIREMFSQFAEFDDELDSMAPVGRDVETLQKQKE  9719

Query  387    VHRAFKRELKTKEPVIMS---TLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRL  443
                +AF   LK  E +I S     +T ++ L  +  E    L    R+L  E  ++   +L
Sbjct  9720   AIKAF---LKKLEALIASNDNANKTCKMMLAME--ETSPDLIGIKRDL--EALSKQCNKL  9878

Query  444    L-RKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQP  502
              L R QA E                 +++ T+ERL+E      E    L++AE  + S  P
Sbjct  9879   LDRAQARE----------------EQVEGTIERLEEFYSKLKEFSTLLQKAEEHEESQGP  10010

Query  503    VGDLLIDSLQDHLEKVKAL-RGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLST-----  556
              VG +  +++   L   KA  + EI PL+     VN L + L    IQ +    ST     
Sbjct  10011  VG-METETINQQLNVFKAFQKEEIEPLQVKQQDVNWLGQGL----IQSAAKGTSTQGLEH  10175

Query  557    -LEDLNTRWKLLQVAVEDRVRQLHEA  581
               L+D+N RWK L   V  R  QL EA
Sbjct  10176  DLDDVNARWKTLNKKVAQRAAQLQEA  10253


 Score = 52.0 bits (123),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 97/443 (21%), Positives = 181/443 (40%), Gaps = 68/443 (15%)
 Frame = +3

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +   Q
Sbjct  12723  QEELDMVINLGSELIAACGEPDKPIVKKSIDELNSAWESLNKAWKDRVDKLEEAMQAAVQ  12902

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHTDV  291
              +   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE     
Sbjct  12903  YQDGLQAIFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE-----  13058

Query  292    YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                 L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +  
Sbjct  13059  MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQ  13238

Query  352    LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
               +L ELL WL   +  LS Q P+GGD  A++ +   H   + +                +
Sbjct  13239  HALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQND----------------V  13370

Query  412    FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
                 +  +E + K   +  E    E A N+                KL + +  WQ  +++
Sbjct  13371  LAHQSTVEAVNKAGNDLIESSAGEEASNLQN--------------KLEVLNQRWQNVLEK  13508

Query  472    TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKEN  531
              T +R Q       +LD  LRQA+   G  + +   L D+ + HL   K L G     +E 
Sbjct  13509  TEQRKQ-------QLDGALRQAKGFHGEIEDLHQWLTDT-ERHLLASKPLGGLPETAREQ  13664

Query  532    V-SHV---------NDLARQLTTLGIQL---SPYNLSTL-EDLNT---RWKLLQVAVEDR  574
              + +H+          ++ + L   G Q+    P +  T+ +DLN    +W+ ++  + +R
Sbjct  13665  LNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKSAETIDQDLNNLKEKWESVETKLNER  13844

Query  575    VRQLHEA---HRDFGPASQHFLS  594
                +L EA     +F  + Q F++
Sbjct  13845  KTKLEEALNLAMEFHNSLQDFIN  13913


 Score = 50.1 bits (118),  Expect = 0.009, Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 106/237 (44%), Gaps = 1/237 (0%)
 Frame = +3

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW++L +WL   ++ + S+  +  D + I   + + K   + L  +    +      
Sbjct  14211  FHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTG  14390

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              ++LK KTS  +    + D +  ++++WD +      R+ +L E L  S Q+ +A +    
Sbjct  14391  RSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALID  14570

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   I   K   K+L +  ++V      A +L+ + S D
Sbjct  14571  WLYRVEPQLAEDQPVHGDIDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELI-EGSRD  14747

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT  251
              D+  V +  + ++  W ++      ++  LE   R  ++F   +   L WL EAE T
Sbjct  14748  DSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQT  14918


 Score = 49.3 bits (116),  Expect = 0.012, Method: Compositional matrix adjust.
 Identities = 102/506 (20%), Positives = 211/506 (41%), Gaps = 52/506 (10%)
 Frame = +3

Query  87     RTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESW  146
              + +ITD  + +  + D V E L +++  L  M +   ++ E  +EA++ L  A+ +L+  
Sbjct  9168   KEVITDENKSLIQKIDMVTEQLHSKKFSLENMAQKFKEFQEVSKEAKRQLQCAKEQLDVH  9347

Query  147    KE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS-ADDTRKVHMITE  204
                 GP         + +T+Q  K L+  +  VD+   LA  L+ + S +  T  V + +E
Sbjct  9348   DSLGPQAYSNKYLSVLQTQQ--KGLQTLKHQVDLVKGLAQDLVVEASDSKGTSDVLLQSE  9521

Query  205    NINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK-ER  263
              ++     ++ ++V ER + LE   + +  F   + +  +   E +   + +    R  E 
Sbjct  9522   SLVQEHSALSQQVDERCSFLETKLQGIGHFQNTIREMFSQFAEFDDELDSMAPVGRDVET  9701

Query  264    LLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMN  323
              L +  + +K  +K+       +EA      N ++  + +L   E S D + ++R L+ ++
Sbjct  9702   LQKQKEAIKAFLKK-------LEALIASNDNANKTCKMMLAMEETSPDLIGIKRDLEALS  9860

Query  324    FKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQK  383
               + ++L  ++      +E + ++ +  +  L+E    LQ  ++    Q P+G +   + +
Sbjct  9861   KQCNKLLDRAQAREEQVEGTIERLEEFYSKLKEFSTLLQKAEEHEESQGPVGMETETINQ  10040

Query  384    QNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRL  443
              Q +V +AF++E      V    +  +   L +   +G                    T+ 
Sbjct  10041  QLNVFKAFQKEEIEPLQVKQQDVNWLGQGLIQSAAKG------------------TSTQG  10166

Query  444    LRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPV  503
              L    ++VN  W+ LN   A    ++ E L      Q+A + L            SW   
Sbjct  10167  LEHDLDDVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESL-----------LSWMVD  10313

Query  504    GDLLIDSLQDHLEKVKALRGEIAP-------LKENVSHVNDLARQLTTLGIQLSPYN---  553
               + L+ + +    + K ++ +I         L +  S V  + R+   +     P +   
Sbjct  10314  TEELVANQKPPSAEFKVVKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIAATAEPADKVK  10493

Query  554    -LSTLEDLNTRWKLLQVAVEDRVRQL  578
               L  L  L++RW+ L    E R RQL
Sbjct  10494  ILKQLSLLDSRWEALLNKAETRNRQL  10571


>ref|XM_861627.1| PREDICTED: Canis familiaris dystonin, transcript variant 10 (DST), 
mRNA
Length=17587

 Score = 85.9 bits (211),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 136/597 (22%), Positives = 249/597 (41%), Gaps = 72/597 (12%)
 Frame = +3

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  13098  ALGQFQHALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  13277

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
                A  +L   ++ +EA  +  +++E +  +W  V E  + R+QQL+  L+          
Sbjct  13278  NKAGNDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIE  13454

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQW  173
              D  QWL   E    A + LG     AR +L +  E     D         +++ K L Q 
Sbjct  13455  DLHQWLTDTERHLLASKPLGGLPETAREQLNAHMEICAAFDV-------KEEIYKSLMQK  13613

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
                 +         L R   + +T  +     N+   W S+  +++ER+  LEE   L  +
Sbjct  13614  GQQM---------LARCPKSAET--IDQDLNNLKEKWESVETKLNERKTKLEEALNLAME  13760

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYH  293
              F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H +   
Sbjct  13761  FHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSHREQII  13922

Query  294    NLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLS  353
               LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K+ H +
Sbjct  13923  ELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAKQFHEA  14099

Query  354    LQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFL  413
                +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T     
Sbjct  14100  WSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRT-----  14264

Query  414    TEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETL  473
                             R L  +    +    L     E+  +W+ +   S + Q K++E L
Sbjct  14265  --------------GRSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEAL  14402

Query  474    ERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAPLKENV  532
                  +  +A   L   L + E      QPV GD  ID + + ++  K  + E+     +V
Sbjct  14403  LFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKVFQKELGKRTSSV  14576

Query  533    SHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHEAH  582
                +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E H
Sbjct  14577  QALKRSARELIEGSRDDSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFH  14747


 Score = 61.6 bits (148),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 166/389 (42%), Gaps = 23/389 (5%)
 Frame = +3

Query  22     LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
              + DW+ +    + S   +  DLE + + I + K    +  Q++ ++E L   A+ L  K 
Sbjct  12801  IFDWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIEMERLNHQAELLLKKV  12980

Query  82     SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
              + +  +  + D +  ++  WD + E + NR+ +L   L    Q+  A +E    L     
Sbjct  12981  TEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQHALDELLTWLTHTEG  13160

Query  142    KLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHM  201
               L   K       AI+ ++ +   L  D+   Q+ V+  N     L+   + ++   +  
Sbjct  13161  LLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAVNKAGNDLIESSAGEEASNLQN  13340

Query  202    ITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK  261
                E +N  W+++ ++  +R+  L+   R  + F  ++E    WLT+              
Sbjct  13341  KLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIEDLHQWLTDT-------------  13481

Query  262    ERLLEDSK---GVKELMKQWQDLQGEIEAHTDV----YHNLDENSQKILRSLEGSDDAVL  314
              ER L  SK   G+ E  ++  +   EI A  DV    Y +L +  Q++L     S  A  
Sbjct  13482  ERHLLASKPLGGLPETAREQLNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKS--AET  13655

Query  315    LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPI  374
              + + L+N+  KW  +  K    ++ LE + +     H SLQ+ + WL   +  L+  +  
Sbjct  13656  IDQDLNNLKEKWESVETKLNERKTKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRP  13835

Query  375    GGDFPAVQKQNDVHRAFKRELKT-KEPVI  402
                    V  Q D H+ F  E+ + +E +I
Sbjct  13836  SLILDTVLFQIDEHKVFANEVNSHREQII  13922


 Score = 52.0 bits (123),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 97/443 (21%), Positives = 181/443 (40%), Gaps = 68/443 (15%)
 Frame = +3

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +   Q
Sbjct  12600  QEELDMVINLGSELIAACGEPDKPIVKKSIDELNSAWESLNKAWKDRVDKLEEAMQAAVQ  12779

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHTDV  291
              +   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE     
Sbjct  12780  YQDGLQAIFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE-----  12935

Query  292    YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                 L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +  
Sbjct  12936  MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQ  13115

Query  352    LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
               +L ELL WL   +  LS Q P+GGD  A++ +   H   + +                +
Sbjct  13116  HALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQND----------------V  13247

Query  412    FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
                 +  +E + K   +  E    E A N+                KL + +  WQ  +++
Sbjct  13248  LAHQSTVEAVNKAGNDLIESSAGEEASNLQN--------------KLEVLNQRWQNVLEK  13385

Query  472    TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKEN  531
              T +R Q       +LD  LRQA+   G  + +   L D+ + HL   K L G     +E 
Sbjct  13386  TEQRKQ-------QLDGALRQAKGFHGEIEDLHQWLTDT-ERHLLASKPLGGLPETAREQ  13541

Query  532    V-SHV---------NDLARQLTTLGIQL---SPYNLSTL-EDLNT---RWKLLQVAVEDR  574
              + +H+          ++ + L   G Q+    P +  T+ +DLN    +W+ ++  + +R
Sbjct  13542  LNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKSAETIDQDLNNLKEKWESVETKLNER  13721

Query  575    VRQLHEA---HRDFGPASQHFLS  594
                +L EA     +F  + Q F++
Sbjct  13722  KTKLEEALNLAMEFHNSLQDFIN  13790


 Score = 49.7 bits (117),  Expect = 0.009, Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 106/237 (44%), Gaps = 1/237 (0%)
 Frame = +3

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW++L +WL   ++ + S+  +  D + I   + + K   + L  +    +      
Sbjct  14088  FHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTG  14267

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              ++LK KTS  +    + D +  ++++WD +      R+ +L E L  S Q+ +A +    
Sbjct  14268  RSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALID  14447

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   I   K   K+L +  ++V      A +L+ + S D
Sbjct  14448  WLYRVEPQLAEDQPVHGDIDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELI-EGSRD  14624

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT  251
              D+  V +  + ++  W ++      ++  LE   R  ++F   +   L WL EAE T
Sbjct  14625  DSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQT  14795


 Score = 46.2 bits (108),  Expect = 0.10, Method: Compositional matrix adjust.
 Identities = 82/368 (22%), Positives = 159/368 (43%), Gaps = 25/368 (6%)
 Frame = +3

Query  94     IERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTV  153
              ++ +  +W  + + +  R  QL E L    ++ +A E     +      + + K      
Sbjct  10383  LDDVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESLLSWMVDTEELVANQKPPSAEF  10562

Query  154    DAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSI  213
                ++ +I E K L + L   ++ V+V      K+       D  K+      +++ W ++
Sbjct  10563  KVVKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIAATAEPADKVKILKQLSLLDSRWEAL  10742

Query  214    HKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT-ANVLQDATRKERLLEDSKGVK  272
                +   R   LE    + QQF   LE    WLT  E   AN     T+  +L       +
Sbjct  10743  LNKAETRNRQLEGISVVAQQFHETLEPLNEWLTTIEKKLANCEPIGTQASKL-------E  10901

Query  273    ELMKQWQDLQGEIEAHTDVYHNLDE---NSQKILRSLEGSDDAVLLQRRLDNMNFKWSEL  329
              E + Q + LQ +I        N+D+   N  ++L+   G D+ +++Q +L+ +  ++ ++
Sbjct  10902  EQITQHKVLQEDILLRK---QNVDQALLNGLELLKQTTG-DEVLIIQDKLEAIKARYKDI  11069

Query  330    RKKSLNIRSHLEASSDQWKRLHLSLQELLVWL-QLKDDELSRQAPIGGDFPAVQKQNDVH  388
               K S ++   LE +    +RLH + +EL  WL +++ + LS +  +     A Q Q    
Sbjct  11070  TKLSTDVAKTLEQALQLARRLHATREELCTWLDKVEVELLSYETQVLTGEAASQAQAR-Q  11246

Query  389    RAFKRELKTKEPVIMSTLETVRIFLTEQPL---EGLEKLYQEPRELPPEERAQNVTRLLR  445
              +  K+E K  + ++ S  E     L   P    EGLEK+  E       +R + V+  + 
Sbjct  11247  KELKKEAKNSKALLDSLNEVSSALLELVPWRAREGLEKMVAEDN-----DRYRLVSDTIT  11411

Query  446    KQAEEVNT  453
              ++ EE++ 
Sbjct  11412  QKVEEIDA  11435


>ref|XM_861585.1| PREDICTED: Canis familiaris dystonin, transcript variant 7 (DST), 
mRNA
Length=17320

 Score = 85.9 bits (211),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 136/597 (22%), Positives = 249/597 (41%), Gaps = 72/597 (12%)
 Frame = +3

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  12831  ALGQFQHALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  13010

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
                A  +L   ++ +EA  +  +++E +  +W  V E  + R+QQL+  L+          
Sbjct  13011  NKAGNDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIE  13187

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQW  173
              D  QWL   E    A + LG     AR +L +  E     D         +++ K L Q 
Sbjct  13188  DLHQWLTDTERHLLASKPLGGLPETAREQLNAHMEICAAFDV-------KEEIYKSLMQK  13346

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
                 +         L R   + +T  +     N+   W S+  +++ER+  LEE   L  +
Sbjct  13347  GQQM---------LARCPKSAET--IDQDLNNLKEKWESVETKLNERKTKLEEALNLAME  13493

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYH  293
              F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H +   
Sbjct  13494  FHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSHREQII  13655

Query  294    NLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLS  353
               LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K+ H +
Sbjct  13656  ELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAKQFHEA  13832

Query  354    LQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFL  413
                +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T     
Sbjct  13833  WSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRT-----  13997

Query  414    TEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETL  473
                             R L  +    +    L     E+  +W+ +   S + Q K++E L
Sbjct  13998  --------------GRSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEAL  14135

Query  474    ERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAPLKENV  532
                  +  +A   L   L + E      QPV GD  ID + + ++  K  + E+     +V
Sbjct  14136  LFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKVFQKELGKRTSSV  14309

Query  533    SHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHEAH  582
                +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E H
Sbjct  14310  QALKRSARELIEGSRDDSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFH  14480


 Score = 61.6 bits (148),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 166/389 (42%), Gaps = 23/389 (5%)
 Frame = +3

Query  22     LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
              + DW+ +    + S   +  DLE + + I + K    +  Q++ ++E L   A+ L  K 
Sbjct  12534  IFDWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIEMERLNHQAELLLKKV  12713

Query  82     SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
              + +  +  + D +  ++  WD + E + NR+ +L   L    Q+  A +E    L     
Sbjct  12714  TEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQHALDELLTWLTHTEG  12893

Query  142    KLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHM  201
               L   K       AI+ ++ +   L  D+   Q+ V+  N     L+   + ++   +  
Sbjct  12894  LLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAVNKAGNDLIESSAGEEASNLQN  13073

Query  202    ITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK  261
                E +N  W+++ ++  +R+  L+   R  + F  ++E    WLT+              
Sbjct  13074  KLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIEDLHQWLTDT-------------  13214

Query  262    ERLLEDSK---GVKELMKQWQDLQGEIEAHTDV----YHNLDENSQKILRSLEGSDDAVL  314
              ER L  SK   G+ E  ++  +   EI A  DV    Y +L +  Q++L     S  A  
Sbjct  13215  ERHLLASKPLGGLPETAREQLNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKS--AET  13388

Query  315    LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPI  374
              + + L+N+  KW  +  K    ++ LE + +     H SLQ+ + WL   +  L+  +  
Sbjct  13389  IDQDLNNLKEKWESVETKLNERKTKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRP  13568

Query  375    GGDFPAVQKQNDVHRAFKRELKT-KEPVI  402
                    V  Q D H+ F  E+ + +E +I
Sbjct  13569  SLILDTVLFQIDEHKVFANEVNSHREQII  13655


 Score = 52.0 bits (123),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 97/443 (21%), Positives = 181/443 (40%), Gaps = 68/443 (15%)
 Frame = +3

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +   Q
Sbjct  12333  QEELDMVINLGSELIAACGEPDKPIVKKSIDELNSAWESLNKAWKDRVDKLEEAMQAAVQ  12512

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHTDV  291
              +   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE     
Sbjct  12513  YQDGLQAIFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE-----  12668

Query  292    YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                 L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +  
Sbjct  12669  MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQ  12848

Query  352    LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
               +L ELL WL   +  LS Q P+GGD  A++ +   H   + +                +
Sbjct  12849  HALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQND----------------V  12980

Query  412    FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
                 +  +E + K   +  E    E A N+                KL + +  WQ  +++
Sbjct  12981  LAHQSTVEAVNKAGNDLIESSAGEEASNLQN--------------KLEVLNQRWQNVLEK  13118

Query  472    TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKEN  531
              T +R Q       +LD  LRQA+   G  + +   L D+ + HL   K L G     +E 
Sbjct  13119  TEQRKQ-------QLDGALRQAKGFHGEIEDLHQWLTDT-ERHLLASKPLGGLPETAREQ  13274

Query  532    V-SHV---------NDLARQLTTLGIQL---SPYNLSTL-EDLNT---RWKLLQVAVEDR  574
              + +H+          ++ + L   G Q+    P +  T+ +DLN    +W+ ++  + +R
Sbjct  13275  LNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKSAETIDQDLNNLKEKWESVETKLNER  13454

Query  575    VRQLHEA---HRDFGPASQHFLS  594
                +L EA     +F  + Q F++
Sbjct  13455  KTKLEEALNLAMEFHNSLQDFIN  13523


 Score = 49.7 bits (117),  Expect = 0.009, Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 106/237 (44%), Gaps = 1/237 (0%)
 Frame = +3

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW++L +WL   ++ + S+  +  D + I   + + K   + L  +    +      
Sbjct  13821  FHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTG  14000

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              ++LK KTS  +    + D +  ++++WD +      R+ +L E L  S Q+ +A +    
Sbjct  14001  RSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALID  14180

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   I   K   K+L +  ++V      A +L+ + S D
Sbjct  14181  WLYRVEPQLAEDQPVHGDIDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELI-EGSRD  14357

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT  251
              D+  V +  + ++  W ++      ++  LE   R  ++F   +   L WL EAE T
Sbjct  14358  DSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQT  14528


 Score = 46.2 bits (108),  Expect = 0.10, Method: Compositional matrix adjust.
 Identities = 82/368 (22%), Positives = 159/368 (43%), Gaps = 25/368 (6%)
 Frame = +3

Query  94     IERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTV  153
              ++ +  +W  + + +  R  QL E L    ++ +A E     +      + + K      
Sbjct  10116  LDDVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESLLSWMVDTEELVANQKPPSAEF  10295

Query  154    DAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSI  213
                ++ +I E K L + L   ++ V+V      K+       D  K+      +++ W ++
Sbjct  10296  KVVKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIAATAEPADKVKILKQLSLLDSRWEAL  10475

Query  214    HKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT-ANVLQDATRKERLLEDSKGVK  272
                +   R   LE    + QQF   LE    WLT  E   AN     T+  +L       +
Sbjct  10476  LNKAETRNRQLEGISVVAQQFHETLEPLNEWLTTIEKKLANCEPIGTQASKL-------E  10634

Query  273    ELMKQWQDLQGEIEAHTDVYHNLDE---NSQKILRSLEGSDDAVLLQRRLDNMNFKWSEL  329
              E + Q + LQ +I        N+D+   N  ++L+   G D+ +++Q +L+ +  ++ ++
Sbjct  10635  EQITQHKVLQEDILLRK---QNVDQALLNGLELLKQTTG-DEVLIIQDKLEAIKARYKDI  10802

Query  330    RKKSLNIRSHLEASSDQWKRLHLSLQELLVWL-QLKDDELSRQAPIGGDFPAVQKQNDVH  388
               K S ++   LE +    +RLH + +EL  WL +++ + LS +  +     A Q Q    
Sbjct  10803  TKLSTDVAKTLEQALQLARRLHATREELCTWLDKVEVELLSYETQVLTGEAASQAQAR-Q  10979

Query  389    RAFKRELKTKEPVIMSTLETVRIFLTEQPL---EGLEKLYQEPRELPPEERAQNVTRLLR  445
              +  K+E K  + ++ S  E     L   P    EGLEK+  E       +R + V+  + 
Sbjct  10980  KELKKEAKNSKALLDSLNEVSSALLELVPWRAREGLEKMVAEDN-----DRYRLVSDTIT  11144

Query  446    KQAEEVNT  453
              ++ EE++ 
Sbjct  11145  QKVEEIDA  11168


>ref|XM_861669.1| PREDICTED: Canis familiaris dystonin, transcript variant 12 (DST), 
mRNA
Length=23878

 Score = 85.9 bits (211),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 138/602 (22%), Positives = 250/602 (41%), Gaps = 82/602 (13%)
 Frame = +3

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  19299  ALGQFQHALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  19478

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
                A  +L   ++ +EA  +  +++E +  +W  V E  + R+QQL+  L+          
Sbjct  19479  NKAGNDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIE  19655

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDA---IQKKITETKQ--LAK  168
              D  QWL   E    A + LG     AR +L +  E     D    I K + +  Q  LA+
Sbjct  19656  DLHQWLTDTERHLLASKPLGGLPETAREQLNAHMEICAAFDVKEEIYKSLMQKGQQMLAR  19835

Query  169    DLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETH  228
                +  +T   +  DL                     N+   W S+  +++ER+  LEE  
Sbjct  19836  CPKSAET---IDQDL--------------------NNLKEKWESVETKLNERKTKLEEAL  19946

Query  229    RLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAH  288
               L  +F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H
Sbjct  19947  NLAMEFHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSH  20108

Query  289    TDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWK  348
               +    LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K
Sbjct  20109  REQIIELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAK  20285

Query  349    RLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLET  408
              + H +  +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T
Sbjct  20286  QFHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRT  20465

Query  409    VRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRK  468
                                  R L  +    +    L     E+  +W+ +   S + Q K
Sbjct  20466  -------------------GRSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNK  20588

Query  469    IDETLERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAP  527
              ++E L    +  +A   L   L + E      QPV GD  ID + + ++  K  + E+  
Sbjct  20589  LEEALLFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKVFQKELGK  20762

Query  528    LKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHE  580
                 +V  +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E
Sbjct  20763  RTSSVQALKRSARELIEGSRDDSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEE  20942

Query  581    AH  582
               H
Sbjct  20943  FH  20948


 Score = 62.0 bits (149),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 166/389 (42%), Gaps = 23/389 (5%)
 Frame = +3

Query  22     LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
              + DW+ +    + S   +  DLE + + I + K    +  Q++ ++E L   A+ L  K 
Sbjct  19002  IFDWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIEMERLNHQAELLLKKV  19181

Query  82     SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
              + +  +  + D +  ++  WD + E + NR+ +L   L    Q+  A +E    L     
Sbjct  19182  TEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQHALDELLTWLTHTEG  19361

Query  142    KLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHM  201
               L   K       AI+ ++ +   L  D+   Q+ V+  N     L+   + ++   +  
Sbjct  19362  LLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAVNKAGNDLIESSAGEEASNLQN  19541

Query  202    ITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK  261
                E +N  W+++ ++  +R+  L+   R  + F  ++E    WLT+              
Sbjct  19542  KLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIEDLHQWLTDT-------------  19682

Query  262    ERLLEDSK---GVKELMKQWQDLQGEIEAHTDV----YHNLDENSQKILRSLEGSDDAVL  314
              ER L  SK   G+ E  ++  +   EI A  DV    Y +L +  Q++L     S  A  
Sbjct  19683  ERHLLASKPLGGLPETAREQLNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKS--AET  19856

Query  315    LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPI  374
              + + L+N+  KW  +  K    ++ LE + +     H SLQ+ + WL   +  L+  +  
Sbjct  19857  IDQDLNNLKEKWESVETKLNERKTKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRP  20036

Query  375    GGDFPAVQKQNDVHRAFKRELKT-KEPVI  402
                    V  Q D H+ F  E+ + +E +I
Sbjct  20037  SLILDTVLFQIDEHKVFANEVNSHREQII  20123


 Score = 52.0 bits (123),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 97/443 (21%), Positives = 181/443 (40%), Gaps = 68/443 (15%)
 Frame = +3

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +   Q
Sbjct  18801  QEELDMVINLGSELIAACGEPDKPIVKKSIDELNSAWESLNKAWKDRVDKLEEAMQAAVQ  18980

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHTDV  291
              +   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE     
Sbjct  18981  YQDGLQAIFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE-----  19136

Query  292    YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                 L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +  
Sbjct  19137  MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQ  19316

Query  352    LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
               +L ELL WL   +  LS Q P+GGD  A++ +   H   + +                +
Sbjct  19317  HALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQND----------------V  19448

Query  412    FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
                 +  +E + K   +  E    E A N+                KL + +  WQ  +++
Sbjct  19449  LAHQSTVEAVNKAGNDLIESSAGEEASNLQN--------------KLEVLNQRWQNVLEK  19586

Query  472    TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKEN  531
              T +R Q       +LD  LRQA+   G  + +   L D+ + HL   K L G     +E 
Sbjct  19587  TEQRKQ-------QLDGALRQAKGFHGEIEDLHQWLTDT-ERHLLASKPLGGLPETAREQ  19742

Query  532    V-SHV---------NDLARQLTTLGIQL---SPYNLSTL-EDLNT---RWKLLQVAVEDR  574
              + +H+          ++ + L   G Q+    P +  T+ +DLN    +W+ ++  + +R
Sbjct  19743  LNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKSAETIDQDLNNLKEKWESVETKLNER  19922

Query  575    VRQLHEA---HRDFGPASQHFLS  594
                +L EA     +F  + Q F++
Sbjct  19923  KTKLEEALNLAMEFHNSLQDFIN  19991


 Score = 50.1 bits (118),  Expect = 0.008, Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 106/237 (44%), Gaps = 1/237 (0%)
 Frame = +3

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW++L +WL   ++ + S+  +  D + I   + + K   + L  +    +      
Sbjct  20289  FHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTG  20468

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              ++LK KTS  +    + D +  ++++WD +      R+ +L E L  S Q+ +A +    
Sbjct  20469  RSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALID  20648

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   I   K   K+L +  ++V      A +L+ + S D
Sbjct  20649  WLYRVEPQLAEDQPVHGDIDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELI-EGSRD  20825

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT  251
              D+  V +  + ++  W ++      ++  LE   R  ++F   +   L WL EAE T
Sbjct  20826  DSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQT  20996


 Score = 46.6 bits (109),  Expect = 0.093, Method: Compositional matrix adjust.
 Identities = 82/368 (22%), Positives = 159/368 (43%), Gaps = 25/368 (6%)
 Frame = +3

Query  94     IERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTV  153
              ++ +  +W  + + +  R  QL E L    ++ +A E     +      + + K      
Sbjct  16590  LDDVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESLLSWMVDTEELVANQKPPSAEF  16769

Query  154    DAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSI  213
                ++ +I E K L + L   ++ V+V      K+       D  K+      +++ W ++
Sbjct  16770  KVVKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIAATAEPADKVKILKQLSLLDSRWEAL  16949

Query  214    HKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT-ANVLQDATRKERLLEDSKGVK  272
                +   R   LE    + QQF   LE    WLT  E   AN     T+  +L       +
Sbjct  16950  LNKAETRNRQLEGISVVAQQFHETLEPLNEWLTTIEKKLANCEPIGTQASKL-------E  17108

Query  273    ELMKQWQDLQGEIEAHTDVYHNLDE---NSQKILRSLEGSDDAVLLQRRLDNMNFKWSEL  329
              E + Q + LQ +I        N+D+   N  ++L+   G D+ +++Q +L+ +  ++ ++
Sbjct  17109  EQITQHKVLQEDILLRK---QNVDQALLNGLELLKQTTG-DEVLIIQDKLEAIKARYKDI  17276

Query  330    RKKSLNIRSHLEASSDQWKRLHLSLQELLVWL-QLKDDELSRQAPIGGDFPAVQKQNDVH  388
               K S ++   LE +    +RLH + +EL  WL +++ + LS +  +     A Q Q    
Sbjct  17277  TKLSTDVAKTLEQALQLARRLHATREELCTWLDKVEVELLSYETQVLTGEAASQAQAR-Q  17453

Query  389    RAFKRELKTKEPVIMSTLETVRIFLTEQPL---EGLEKLYQEPRELPPEERAQNVTRLLR  445
              +  K+E K  + ++ S  E     L   P    EGLEK+  E       +R + V+  + 
Sbjct  17454  KELKKEAKNSKALLDSLNEVSSALLELVPWRAREGLEKMVAEDN-----DRYRLVSDTIT  17618

Query  446    KQAEEVNT  453
              ++ EE++ 
Sbjct  17619  QKVEEIDA  17642


>ref|XM_861540.1| PREDICTED: Canis familiaris dystonin, transcript variant 3 (DST), 
mRNA
Length=17716

 Score = 85.9 bits (211),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 138/602 (22%), Positives = 250/602 (41%), Gaps = 82/602 (13%)
 Frame = +3

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  13137  ALGQFQHALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  13316

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
                A  +L   ++ +EA  +  +++E +  +W  V E  + R+QQL+  L+          
Sbjct  13317  NKAGNDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIE  13493

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDA---IQKKITETKQ--LAK  168
              D  QWL   E    A + LG     AR +L +  E     D    I K + +  Q  LA+
Sbjct  13494  DLHQWLTDTERHLLASKPLGGLPETAREQLNAHMEICAAFDVKEEIYKSLMQKGQQMLAR  13673

Query  169    DLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETH  228
                +  +T   +  DL                     N+   W S+  +++ER+  LEE  
Sbjct  13674  CPKSAET---IDQDL--------------------NNLKEKWESVETKLNERKTKLEEAL  13784

Query  229    RLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAH  288
               L  +F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H
Sbjct  13785  NLAMEFHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSH  13946

Query  289    TDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWK  348
               +    LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K
Sbjct  13947  REQIIELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAK  14123

Query  349    RLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLET  408
              + H +  +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T
Sbjct  14124  QFHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRT  14303

Query  409    VRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRK  468
                                  R L  +    +    L     E+  +W+ +   S + Q K
Sbjct  14304  -------------------GRSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNK  14426

Query  469    IDETLERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAP  527
              ++E L    +  +A   L   L + E      QPV GD  ID + + ++  K  + E+  
Sbjct  14427  LEEALLFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKVFQKELGK  14600

Query  528    LKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHE  580
                 +V  +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E
Sbjct  14601  RTSSVQALKRSARELIEGSRDDSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEE  14780

Query  581    AH  582
               H
Sbjct  14781  FH  14786


 Score = 62.0 bits (149),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 166/389 (42%), Gaps = 23/389 (5%)
 Frame = +3

Query  22     LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
              + DW+ +    + S   +  DLE + + I + K    +  Q++ ++E L   A+ L  K 
Sbjct  12840  IFDWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIEMERLNHQAELLLKKV  13019

Query  82     SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
              + +  +  + D +  ++  WD + E + NR+ +L   L    Q+  A +E    L     
Sbjct  13020  TEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQHALDELLTWLTHTEG  13199

Query  142    KLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHM  201
               L   K       AI+ ++ +   L  D+   Q+ V+  N     L+   + ++   +  
Sbjct  13200  LLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAVNKAGNDLIESSAGEEASNLQN  13379

Query  202    ITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK  261
                E +N  W+++ ++  +R+  L+   R  + F  ++E    WLT+              
Sbjct  13380  KLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIEDLHQWLTDT-------------  13520

Query  262    ERLLEDSK---GVKELMKQWQDLQGEIEAHTDV----YHNLDENSQKILRSLEGSDDAVL  314
              ER L  SK   G+ E  ++  +   EI A  DV    Y +L +  Q++L     S  A  
Sbjct  13521  ERHLLASKPLGGLPETAREQLNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKS--AET  13694

Query  315    LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPI  374
              + + L+N+  KW  +  K    ++ LE + +     H SLQ+ + WL   +  L+  +  
Sbjct  13695  IDQDLNNLKEKWESVETKLNERKTKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRP  13874

Query  375    GGDFPAVQKQNDVHRAFKRELKT-KEPVI  402
                    V  Q D H+ F  E+ + +E +I
Sbjct  13875  SLILDTVLFQIDEHKVFANEVNSHREQII  13961


 Score = 52.0 bits (123),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 97/443 (21%), Positives = 181/443 (40%), Gaps = 68/443 (15%)
 Frame = +3

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +   Q
Sbjct  12639  QEELDMVINLGSELIAACGEPDKPIVKKSIDELNSAWESLNKAWKDRVDKLEEAMQAAVQ  12818

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHTDV  291
              +   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE     
Sbjct  12819  YQDGLQAIFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE-----  12974

Query  292    YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                 L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +  
Sbjct  12975  MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQ  13154

Query  352    LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
               +L ELL WL   +  LS Q P+GGD  A++ +   H   + +                +
Sbjct  13155  HALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQND----------------V  13286

Query  412    FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
                 +  +E + K   +  E    E A N+                KL + +  WQ  +++
Sbjct  13287  LAHQSTVEAVNKAGNDLIESSAGEEASNLQN--------------KLEVLNQRWQNVLEK  13424

Query  472    TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKEN  531
              T +R Q       +LD  LRQA+   G  + +   L D+ + HL   K L G     +E 
Sbjct  13425  TEQRKQ-------QLDGALRQAKGFHGEIEDLHQWLTDT-ERHLLASKPLGGLPETAREQ  13580

Query  532    V-SHV---------NDLARQLTTLGIQL---SPYNLSTL-EDLNT---RWKLLQVAVEDR  574
              + +H+          ++ + L   G Q+    P +  T+ +DLN    +W+ ++  + +R
Sbjct  13581  LNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKSAETIDQDLNNLKEKWESVETKLNER  13760

Query  575    VRQLHEA---HRDFGPASQHFLS  594
                +L EA     +F  + Q F++
Sbjct  13761  KTKLEEALNLAMEFHNSLQDFIN  13829


 Score = 50.1 bits (118),  Expect = 0.008, Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 106/237 (44%), Gaps = 1/237 (0%)
 Frame = +3

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW++L +WL   ++ + S+  +  D + I   + + K   + L  +    +      
Sbjct  14127  FHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTG  14306

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              ++LK KTS  +    + D +  ++++WD +      R+ +L E L  S Q+ +A +    
Sbjct  14307  RSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALID  14486

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   I   K   K+L +  ++V      A +L+ + S D
Sbjct  14487  WLYRVEPQLAEDQPVHGDIDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELI-EGSRD  14663

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT  251
              D+  V +  + ++  W ++      ++  LE   R  ++F   +   L WL EAE T
Sbjct  14664  DSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQT  14834


 Score = 46.6 bits (109),  Expect = 0.093, Method: Compositional matrix adjust.
 Identities = 82/368 (22%), Positives = 159/368 (43%), Gaps = 25/368 (6%)
 Frame = +3

Query  94     IERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTV  153
              ++ +  +W  + + +  R  QL E L    ++ +A E     +      + + K      
Sbjct  10428  LDDVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESLLSWMVDTEELVANQKPPSAEF  10607

Query  154    DAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSI  213
                ++ +I E K L + L   ++ V+V      K+       D  K+      +++ W ++
Sbjct  10608  KVVKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIAATAEPADKVKILKQLSLLDSRWEAL  10787

Query  214    HKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT-ANVLQDATRKERLLEDSKGVK  272
                +   R   LE    + QQF   LE    WLT  E   AN     T+  +L       +
Sbjct  10788  LNKAETRNRQLEGISVVAQQFHETLEPLNEWLTTIEKKLANCEPIGTQASKL-------E  10946

Query  273    ELMKQWQDLQGEIEAHTDVYHNLDE---NSQKILRSLEGSDDAVLLQRRLDNMNFKWSEL  329
              E + Q + LQ +I        N+D+   N  ++L+   G D+ +++Q +L+ +  ++ ++
Sbjct  10947  EQITQHKVLQEDILLRK---QNVDQALLNGLELLKQTTG-DEVLIIQDKLEAIKARYKDI  11114

Query  330    RKKSLNIRSHLEASSDQWKRLHLSLQELLVWL-QLKDDELSRQAPIGGDFPAVQKQNDVH  388
               K S ++   LE +    +RLH + +EL  WL +++ + LS +  +     A Q Q    
Sbjct  11115  TKLSTDVAKTLEQALQLARRLHATREELCTWLDKVEVELLSYETQVLTGEAASQAQAR-Q  11291

Query  389    RAFKRELKTKEPVIMSTLETVRIFLTEQPL---EGLEKLYQEPRELPPEERAQNVTRLLR  445
              +  K+E K  + ++ S  E     L   P    EGLEK+  E       +R + V+  + 
Sbjct  11292  KELKKEAKNSKALLDSLNEVSSALLELVPWRAREGLEKMVAEDN-----DRYRLVSDTIT  11456

Query  446    KQAEEVNT  453
              ++ EE++ 
Sbjct  11457  QKVEEIDA  11480


>ref|XM_861682.1| PREDICTED: Canis familiaris dystonin, transcript variant 13 (DST), 
mRNA
Length=16499

 Score = 85.9 bits (211),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 136/597 (22%), Positives = 249/597 (41%), Gaps = 72/597 (12%)
 Frame = +1

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  11962  ALGQFQHALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  12141

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
                A  +L   ++ +EA  +  +++E +  +W  V E  + R+QQL+  L+          
Sbjct  12142  NKAGNDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIE  12318

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQW  173
              D  QWL   E    A + LG     AR +L +  E     D         +++ K L Q 
Sbjct  12319  DLHQWLTDTERHLLASKPLGGLPETAREQLNAHMEICAAFDV-------KEEIYKSLMQK  12477

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
                 +         L R   + +T  +     N+   W S+  +++ER+  LEE   L  +
Sbjct  12478  GQQM---------LARCPKSAET--IDQDLNNLKEKWESVETKLNERKTKLEEALNLAME  12624

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYH  293
              F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H +   
Sbjct  12625  FHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSHREQII  12786

Query  294    NLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLS  353
               LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K+ H +
Sbjct  12787  ELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAKQFHEA  12963

Query  354    LQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFL  413
                +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T     
Sbjct  12964  WSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRT-----  13128

Query  414    TEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETL  473
                             R L  +    +    L     E+  +W+ +   S + Q K++E L
Sbjct  13129  --------------GRSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEAL  13266

Query  474    ERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAPLKENV  532
                  +  +A   L   L + E      QPV GD  ID + + ++  K  + E+     +V
Sbjct  13267  LFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKVFQKELGKRTSSV  13440

Query  533    SHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHEAH  582
                +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E H
Sbjct  13441  QALKRSARELIEGSRDDSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFH  13611


 Score = 61.6 bits (148),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 166/389 (42%), Gaps = 23/389 (5%)
 Frame = +1

Query  22     LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
              + DW+ +    + S   +  DLE + + I + K    +  Q++ ++E L   A+ L  K 
Sbjct  11665  IFDWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIEMERLNHQAELLLKKV  11844

Query  82     SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
              + +  +  + D +  ++  WD + E + NR+ +L   L    Q+  A +E    L     
Sbjct  11845  TEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQHALDELLTWLTHTEG  12024

Query  142    KLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHM  201
               L   K       AI+ ++ +   L  D+   Q+ V+  N     L+   + ++   +  
Sbjct  12025  LLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAVNKAGNDLIESSAGEEASNLQN  12204

Query  202    ITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK  261
                E +N  W+++ ++  +R+  L+   R  + F  ++E    WLT+              
Sbjct  12205  KLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIEDLHQWLTDT-------------  12345

Query  262    ERLLEDSK---GVKELMKQWQDLQGEIEAHTDV----YHNLDENSQKILRSLEGSDDAVL  314
              ER L  SK   G+ E  ++  +   EI A  DV    Y +L +  Q++L     S  A  
Sbjct  12346  ERHLLASKPLGGLPETAREQLNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKS--AET  12519

Query  315    LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPI  374
              + + L+N+  KW  +  K    ++ LE + +     H SLQ+ + WL   +  L+  +  
Sbjct  12520  IDQDLNNLKEKWESVETKLNERKTKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRP  12699

Query  375    GGDFPAVQKQNDVHRAFKRELKT-KEPVI  402
                    V  Q D H+ F  E+ + +E +I
Sbjct  12700  SLILDTVLFQIDEHKVFANEVNSHREQII  12786


 Score = 60.8 bits (146),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 140/566 (24%), Positives = 241/566 (42%), Gaps = 84/566 (14%)
 Frame = +1

Query  45    DINEMIIK-QKATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDE  103
             D+ E ++K QK   + L  +    E+ I   +NL  KT   E +  +  ++  I+  WD 
Sbjct  7468  DVLESLLKDQKDFSKMLSAQSSIYEKTIAEGENLLLKTQGSE-KAALQSQLNTIKTSWDG  7644

Query  104   VQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKK--IT  161
               + ++ R  ++ + L+ + ++ E  E     + + +  LE  K   + +D  + +    
Sbjct  7645  FNKQVKEREDKVKDSLEKALKYKEHVETLRPWIDKCQNNLEEIK---FCLDPTETENSTA  7815

Query  162   ETKQLAKDLRQWQTNVDVANDLALKLL------RDYSADDTR----KVHMITENINA---  208
               K L K++ Q    V++ N+ A  LL      ++   D+ +    K+ M+TE +++   
Sbjct  7816  RLKSLQKEMNQHLGMVELLNNAANSLLSVCEVDKEVITDENKSLIQKIDMVTEQLHSKKF  7995

Query  209   SWRSIHKRVSEREAALEETHRLLQ--QFPLDLEKFLAWLTEAETTANVLQDATRKERLLE  266
             S  ++ ++  E +   +E  R LQ  +  LD+   L     +    +VLQ          
Sbjct  7996  SLENMAQKFKEFQEVSKEAKRQLQCAKEQLDVHDSLGPQAYSNKYLSVLQT---------  8148

Query  267   DSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKW  326
               KG++ L  Q            D+   L ++        +G+ D VLLQ   +++  + 
Sbjct  8149  QQKGLQTLKHQ-----------VDLVKGLAQDLVVEASDSKGTSD-VLLQS--ESLVQEH  8286

Query  327   SELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQND  386
             S L ++     S LE           +++E+       DDEL   AP+G D   +QKQ +
Sbjct  8287  SALSQQVDERCSFLETKLQGIGHFQNTIREMFSQFAEFDDELDSMAPVGRDVETLQKQKE  8466

Query  387   VHRAFKRELKTKEPVIMS---TLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRL  443
               +AF   LK  E +I S     +T ++ L  +  E    L    R+L  E  ++   +L
Sbjct  8467  AIKAF---LKKLEALIASNDNANKTCKMMLAME--ETSPDLIGIKRDL--EALSKQCNKL  8625

Query  444   L-RKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQP  502
             L R QA E                 +++ T+ERL+E      E    L++AE  + S  P
Sbjct  8626  LDRAQARE----------------EQVEGTIERLEEFYSKLKEFSTLLQKAEEHEESQGP  8757

Query  503   VGDLLIDSLQDHLEKVKAL-RGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLST-----  556
             VG +  +++   L   KA  + EI PL+     VN L + L    IQ +    ST     
Sbjct  8758  VG-METETINQQLNVFKAFQKEEIEPLQVKQQDVNWLGQGL----IQSAAKGTSTQGLEH  8922

Query  557   -LEDLNTRWKLLQVAVEDRVRQLHEA  581
              L+D+N RWK L   V  R  QL EA
Sbjct  8923  DLDDVNARWKTLNKKVAQRAAQLQEA  9000


 Score = 52.0 bits (123),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 97/443 (21%), Positives = 181/443 (40%), Gaps = 68/443 (15%)
 Frame = +1

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +   Q
Sbjct  11464  QEELDMVINLGSELIAACGEPDKPIVKKSIDELNSAWESLNKAWKDRVDKLEEAMQAAVQ  11643

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHTDV  291
              +   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE     
Sbjct  11644  YQDGLQAIFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE-----  11799

Query  292    YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                 L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +  
Sbjct  11800  MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQ  11979

Query  352    LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
               +L ELL WL   +  LS Q P+GGD  A++ +   H   + +                +
Sbjct  11980  HALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQND----------------V  12111

Query  412    FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
                 +  +E + K   +  E    E A N+                KL + +  WQ  +++
Sbjct  12112  LAHQSTVEAVNKAGNDLIESSAGEEASNLQN--------------KLEVLNQRWQNVLEK  12249

Query  472    TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKEN  531
              T +R Q       +LD  LRQA+   G  + +   L D+ + HL   K L G     +E 
Sbjct  12250  TEQRKQ-------QLDGALRQAKGFHGEIEDLHQWLTDT-ERHLLASKPLGGLPETAREQ  12405

Query  532    V-SHV---------NDLARQLTTLGIQL---SPYNLSTL-EDLNT---RWKLLQVAVEDR  574
              + +H+          ++ + L   G Q+    P +  T+ +DLN    +W+ ++  + +R
Sbjct  12406  LNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKSAETIDQDLNNLKEKWESVETKLNER  12585

Query  575    VRQLHEA---HRDFGPASQHFLS  594
                +L EA     +F  + Q F++
Sbjct  12586  KTKLEEALNLAMEFHNSLQDFIN  12654


 Score = 49.7 bits (117),  Expect = 0.009, Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 106/237 (44%), Gaps = 1/237 (0%)
 Frame = +1

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW++L +WL   ++ + S+  +  D + I   + + K   + L  +    +      
Sbjct  12952  FHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTG  13131

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              ++LK KTS  +    + D +  ++++WD +      R+ +L E L  S Q+ +A +    
Sbjct  13132  RSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALID  13311

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   I   K   K+L +  ++V      A +L+ + S D
Sbjct  13312  WLYRVEPQLAEDQPVHGDIDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELI-EGSRD  13488

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT  251
              D+  V +  + ++  W ++      ++  LE   R  ++F   +   L WL EAE T
Sbjct  13489  DSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQT  13659


 Score = 49.3 bits (116),  Expect = 0.012, Method: Compositional matrix adjust.
 Identities = 102/506 (20%), Positives = 211/506 (41%), Gaps = 52/506 (10%)
 Frame = +1

Query  87    RTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESW  146
             + +ITD  + +  + D V E L +++  L  M +   ++ E  +EA++ L  A+ +L+  
Sbjct  7915  KEVITDENKSLIQKIDMVTEQLHSKKFSLENMAQKFKEFQEVSKEAKRQLQCAKEQLDVH  8094

Query  147   KE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS-ADDTRKVHMITE  204
                GP         + +T+Q  K L+  +  VD+   LA  L+ + S +  T  V + +E
Sbjct  8095  DSLGPQAYSNKYLSVLQTQQ--KGLQTLKHQVDLVKGLAQDLVVEASDSKGTSDVLLQSE  8268

Query  205   NINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK-ER  263
             ++     ++ ++V ER + LE   + +  F   + +  +   E +   + +    R  E 
Sbjct  8269  SLVQEHSALSQQVDERCSFLETKLQGIGHFQNTIREMFSQFAEFDDELDSMAPVGRDVET  8448

Query  264   LLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMN  323
             L +  + +K  +K+       +EA      N ++  + +L   E S D + ++R L+ ++
Sbjct  8449  LQKQKEAIKAFLKK-------LEALIASNDNANKTCKMMLAMEETSPDLIGIKRDLEALS  8607

Query  324   FKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQK  383
              + ++L  ++      +E + ++ +  +  L+E    LQ  ++    Q P+G +   + +
Sbjct  8608  KQCNKLLDRAQAREEQVEGTIERLEEFYSKLKEFSTLLQKAEEHEESQGPVGMETETINQ  8787

Query  384   QNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRL  443
             Q +V +AF++E      V    +  +   L +   +G                    T+ 
Sbjct  8788  QLNVFKAFQKEEIEPLQVKQQDVNWLGQGLIQSAAKG------------------TSTQG  8913

Query  444   LRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPV  503
             L    ++VN  W+ LN   A    ++ E L      Q+A + L            SW   
Sbjct  8914  LEHDLDDVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESL-----------LSWMVD  9060

Query  504   GDLLIDSLQDHLEKVKALRGEIAP-------LKENVSHVNDLARQLTTLGIQLSPYN---  553
              + L+ + +    + K ++ +I         L +  S V  + R+   +     P +   
Sbjct  9061  TEELVANQKPPSAEFKVVKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIAATAEPADKVK  9240

Query  554   -LSTLEDLNTRWKLLQVAVEDRVRQL  578
              L  L  L++RW+ L    E R RQL
Sbjct  9241  ILKQLSLLDSRWEALLNKAETRNRQL  9318


>ref|XM_861654.1| PREDICTED: Canis familiaris dystonin, transcript variant 11 (DST), 
mRNA
Length=17962

 Score = 85.9 bits (211),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 136/597 (22%), Positives = 249/597 (41%), Gaps = 72/597 (12%)
 Frame = +3

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  13464  ALGQFQHALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  13643

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
                A  +L   ++ +EA  +  +++E +  +W  V E  + R+QQL+  L+          
Sbjct  13644  NKAGNDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIE  13820

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQW  173
              D  QWL   E    A + LG     AR +L +  E     D         +++ K L Q 
Sbjct  13821  DLHQWLTDTERHLLASKPLGGLPETAREQLNAHMEICAAFDV-------KEEIYKSLMQK  13979

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
                 +         L R   + +T  +     N+   W S+  +++ER+  LEE   L  +
Sbjct  13980  GQQM---------LARCPKSAET--IDQDLNNLKEKWESVETKLNERKTKLEEALNLAME  14126

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYH  293
              F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H +   
Sbjct  14127  FHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSHREQII  14288

Query  294    NLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLS  353
               LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K+ H +
Sbjct  14289  ELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAKQFHEA  14465

Query  354    LQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFL  413
                +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T     
Sbjct  14466  WSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRT-----  14630

Query  414    TEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETL  473
                             R L  +    +    L     E+  +W+ +   S + Q K++E L
Sbjct  14631  --------------GRSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEAL  14768

Query  474    ERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAPLKENV  532
                  +  +A   L   L + E      QPV GD  ID + + ++  K  + E+     +V
Sbjct  14769  LFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKVFQKELGKRTSSV  14942

Query  533    SHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHEAH  582
                +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E H
Sbjct  14943  QALKRSARELIEGSRDDSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFH  15113


 Score = 61.6 bits (148),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 166/389 (42%), Gaps = 23/389 (5%)
 Frame = +3

Query  22     LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
              + DW+ +    + S   +  DLE + + I + K    +  Q++ ++E L   A+ L  K 
Sbjct  13167  IFDWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIEMERLNHQAELLLKKV  13346

Query  82     SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
              + +  +  + D +  ++  WD + E + NR+ +L   L    Q+  A +E    L     
Sbjct  13347  TEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQHALDELLTWLTHTEG  13526

Query  142    KLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHM  201
               L   K       AI+ ++ +   L  D+   Q+ V+  N     L+   + ++   +  
Sbjct  13527  LLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAVNKAGNDLIESSAGEEASNLQN  13706

Query  202    ITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK  261
                E +N  W+++ ++  +R+  L+   R  + F  ++E    WLT+              
Sbjct  13707  KLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIEDLHQWLTDT-------------  13847

Query  262    ERLLEDSK---GVKELMKQWQDLQGEIEAHTDV----YHNLDENSQKILRSLEGSDDAVL  314
              ER L  SK   G+ E  ++  +   EI A  DV    Y +L +  Q++L     S  A  
Sbjct  13848  ERHLLASKPLGGLPETAREQLNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKS--AET  14021

Query  315    LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPI  374
              + + L+N+  KW  +  K    ++ LE + +     H SLQ+ + WL   +  L+  +  
Sbjct  14022  IDQDLNNLKEKWESVETKLNERKTKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRP  14201

Query  375    GGDFPAVQKQNDVHRAFKRELKT-KEPVI  402
                    V  Q D H+ F  E+ + +E +I
Sbjct  14202  SLILDTVLFQIDEHKVFANEVNSHREQII  14288


 Score = 60.8 bits (146),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 140/566 (24%), Positives = 241/566 (42%), Gaps = 84/566 (14%)
 Frame = +3

Query  45     DINEMIIK-QKATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDE  103
              D+ E ++K QK   + L  +    E+ I   +NL  KT   E +  +  ++  I+  WD 
Sbjct  8970   DVLESLLKDQKDFSKMLSAQSSIYEKTIAEGENLLLKTQGSE-KAALQSQLNTIKTSWDG  9146

Query  104    VQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKK--IT  161
                + ++ R  ++ + L+ + ++ E  E     + + +  LE  K   + +D  + +    
Sbjct  9147   FNKQVKEREDKVKDSLEKALKYKEHVETLRPWIDKCQNNLEEIK---FCLDPTETENSTA  9317

Query  162    ETKQLAKDLRQWQTNVDVANDLALKLL------RDYSADDTR----KVHMITENINA---  208
                K L K++ Q    V++ N+ A  LL      ++   D+ +    K+ M+TE +++   
Sbjct  9318   RLKSLQKEMNQHLGMVELLNNAANSLLSVCEVDKEVITDENKSLIQKIDMVTEQLHSKKF  9497

Query  209    SWRSIHKRVSEREAALEETHRLLQ--QFPLDLEKFLAWLTEAETTANVLQDATRKERLLE  266
              S  ++ ++  E +   +E  R LQ  +  LD+   L     +    +VLQ          
Sbjct  9498   SLENMAQKFKEFQEVSKEAKRQLQCAKEQLDVHDSLGPQAYSNKYLSVLQT---------  9650

Query  267    DSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKW  326
                KG++ L  Q            D+   L ++        +G+ D VLLQ   +++  + 
Sbjct  9651   QQKGLQTLKHQ-----------VDLVKGLAQDLVVEASDSKGTSD-VLLQS--ESLVQEH  9788

Query  327    SELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQND  386
              S L ++     S LE           +++E+       DDEL   AP+G D   +QKQ +
Sbjct  9789   SALSQQVDERCSFLETKLQGIGHFQNTIREMFSQFAEFDDELDSMAPVGRDVETLQKQKE  9968

Query  387    VHRAFKRELKTKEPVIMS---TLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRL  443
                +AF   LK  E +I S     +T ++ L  +  E    L    R+L  E  ++   +L
Sbjct  9969   AIKAF---LKKLEALIASNDNANKTCKMMLAME--ETSPDLIGIKRDL--EALSKQCNKL  10127

Query  444    L-RKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQP  502
              L R QA E                 +++ T+ERL+E      E    L++AE  + S  P
Sbjct  10128  LDRAQARE----------------EQVEGTIERLEEFYSKLKEFSTLLQKAEEHEESQGP  10259

Query  503    VGDLLIDSLQDHLEKVKAL-RGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLST-----  556
              VG +  +++   L   KA  + EI PL+     VN L + L    IQ +    ST     
Sbjct  10260  VG-METETINQQLNVFKAFQKEEIEPLQVKQQDVNWLGQGL----IQSAAKGTSTQGLEH  10424

Query  557    -LEDLNTRWKLLQVAVEDRVRQLHEA  581
               L+D+N RWK L   V  R  QL EA
Sbjct  10425  DLDDVNARWKTLNKKVAQRAAQLQEA  10502


 Score = 52.0 bits (123),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 97/443 (21%), Positives = 181/443 (40%), Gaps = 68/443 (15%)
 Frame = +3

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +   Q
Sbjct  12966  QEELDMVINLGSELIAACGEPDKPIVKKSIDELNSAWESLNKAWKDRVDKLEEAMQAAVQ  13145

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHTDV  291
              +   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE     
Sbjct  13146  YQDGLQAIFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE-----  13301

Query  292    YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                 L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +  
Sbjct  13302  MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQ  13481

Query  352    LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
               +L ELL WL   +  LS Q P+GGD  A++ +   H   + +                +
Sbjct  13482  HALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQND----------------V  13613

Query  412    FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
                 +  +E + K   +  E    E A N+                KL + +  WQ  +++
Sbjct  13614  LAHQSTVEAVNKAGNDLIESSAGEEASNLQN--------------KLEVLNQRWQNVLEK  13751

Query  472    TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKEN  531
              T +R Q       +LD  LRQA+   G  + +   L D+ + HL   K L G     +E 
Sbjct  13752  TEQRKQ-------QLDGALRQAKGFHGEIEDLHQWLTDT-ERHLLASKPLGGLPETAREQ  13907

Query  532    V-SHV---------NDLARQLTTLGIQL---SPYNLSTL-EDLNT---RWKLLQVAVEDR  574
              + +H+          ++ + L   G Q+    P +  T+ +DLN    +W+ ++  + +R
Sbjct  13908  LNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKSAETIDQDLNNLKEKWESVETKLNER  14087

Query  575    VRQLHEA---HRDFGPASQHFLS  594
                +L EA     +F  + Q F++
Sbjct  14088  KTKLEEALNLAMEFHNSLQDFIN  14156


 Score = 49.7 bits (117),  Expect = 0.009, Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 106/237 (44%), Gaps = 1/237 (0%)
 Frame = +3

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW++L +WL   ++ + S+  +  D + I   + + K   + L  +    +      
Sbjct  14454  FHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTG  14633

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              ++LK KTS  +    + D +  ++++WD +      R+ +L E L  S Q+ +A +    
Sbjct  14634  RSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALID  14813

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   I   K   K+L +  ++V      A +L+ + S D
Sbjct  14814  WLYRVEPQLAEDQPVHGDIDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELI-EGSRD  14990

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT  251
              D+  V +  + ++  W ++      ++  LE   R  ++F   +   L WL EAE T
Sbjct  14991  DSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQT  15161


 Score = 49.3 bits (116),  Expect = 0.012, Method: Compositional matrix adjust.
 Identities = 102/506 (20%), Positives = 211/506 (41%), Gaps = 52/506 (10%)
 Frame = +3

Query  87     RTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESW  146
              + +ITD  + +  + D V E L +++  L  M +   ++ E  +EA++ L  A+ +L+  
Sbjct  9417   KEVITDENKSLIQKIDMVTEQLHSKKFSLENMAQKFKEFQEVSKEAKRQLQCAKEQLDVH  9596

Query  147    KE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS-ADDTRKVHMITE  204
                 GP         + +T+Q  K L+  +  VD+   LA  L+ + S +  T  V + +E
Sbjct  9597   DSLGPQAYSNKYLSVLQTQQ--KGLQTLKHQVDLVKGLAQDLVVEASDSKGTSDVLLQSE  9770

Query  205    NINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK-ER  263
              ++     ++ ++V ER + LE   + +  F   + +  +   E +   + +    R  E 
Sbjct  9771   SLVQEHSALSQQVDERCSFLETKLQGIGHFQNTIREMFSQFAEFDDELDSMAPVGRDVET  9950

Query  264    LLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMN  323
              L +  + +K  +K+       +EA      N ++  + +L   E S D + ++R L+ ++
Sbjct  9951   LQKQKEAIKAFLKK-------LEALIASNDNANKTCKMMLAMEETSPDLIGIKRDLEALS  10109

Query  324    FKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQK  383
               + ++L  ++      +E + ++ +  +  L+E    LQ  ++    Q P+G +   + +
Sbjct  10110  KQCNKLLDRAQAREEQVEGTIERLEEFYSKLKEFSTLLQKAEEHEESQGPVGMETETINQ  10289

Query  384    QNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRL  443
              Q +V +AF++E      V    +  +   L +   +G                    T+ 
Sbjct  10290  QLNVFKAFQKEEIEPLQVKQQDVNWLGQGLIQSAAKG------------------TSTQG  10415

Query  444    LRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPV  503
              L    ++VN  W+ LN   A    ++ E L      Q+A + L            SW   
Sbjct  10416  LEHDLDDVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESL-----------LSWMVD  10562

Query  504    GDLLIDSLQDHLEKVKALRGEIAP-------LKENVSHVNDLARQLTTLGIQLSPYN---  553
               + L+ + +    + K ++ +I         L +  S V  + R+   +     P +   
Sbjct  10563  TEELVANQKPPSAEFKVVKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIAATAEPADKVK  10742

Query  554    -LSTLEDLNTRWKLLQVAVEDRVRQL  578
               L  L  L++RW+ L    E R RQL
Sbjct  10743  ILKQLSLLDSRWEALLNKAETRNRQL  10820


>ref|XM_532183.2| PREDICTED: Canis familiaris dystonin, transcript variant 1 (DST), 
mRNA
Length=24184

 Score = 85.9 bits (211),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 136/597 (22%), Positives = 249/597 (41%), Gaps = 72/597 (12%)
 Frame = +3

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  19686  ALGQFQHALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  19865

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
                A  +L   ++ +EA  +  +++E +  +W  V E  + R+QQL+  L+          
Sbjct  19866  NKAGNDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIE  20042

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQW  173
              D  QWL   E    A + LG     AR +L +  E     D         +++ K L Q 
Sbjct  20043  DLHQWLTDTERHLLASKPLGGLPETAREQLNAHMEICAAFDV-------KEEIYKSLMQK  20201

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
                 +         L R   + +T  +     N+   W S+  +++ER+  LEE   L  +
Sbjct  20202  GQQM---------LARCPKSAET--IDQDLNNLKEKWESVETKLNERKTKLEEALNLAME  20348

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYH  293
              F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H +   
Sbjct  20349  FHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSHREQII  20510

Query  294    NLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLS  353
               LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K+ H +
Sbjct  20511  ELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAKQFHEA  20687

Query  354    LQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFL  413
                +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T     
Sbjct  20688  WSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRT-----  20852

Query  414    TEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETL  473
                             R L  +    +    L     E+  +W+ +   S + Q K++E L
Sbjct  20853  --------------GRSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEAL  20990

Query  474    ERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAPLKENV  532
                  +  +A   L   L + E      QPV GD  ID + + ++  K  + E+     +V
Sbjct  20991  LFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKVFQKELGKRTSSV  21164

Query  533    SHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHEAH  582
                +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E H
Sbjct  21165  QALKRSARELIEGSRDDSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFH  21335


 Score = 61.6 bits (148),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 166/389 (42%), Gaps = 23/389 (5%)
 Frame = +3

Query  22     LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
              + DW+ +    + S   +  DLE + + I + K    +  Q++ ++E L   A+ L  K 
Sbjct  19389  IFDWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIEMERLNHQAELLLKKV  19568

Query  82     SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
              + +  +  + D +  ++  WD + E + NR+ +L   L    Q+  A +E    L     
Sbjct  19569  TEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQHALDELLTWLTHTEG  19748

Query  142    KLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHM  201
               L   K       AI+ ++ +   L  D+   Q+ V+  N     L+   + ++   +  
Sbjct  19749  LLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAVNKAGNDLIESSAGEEASNLQN  19928

Query  202    ITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK  261
                E +N  W+++ ++  +R+  L+   R  + F  ++E    WLT+              
Sbjct  19929  KLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIEDLHQWLTDT-------------  20069

Query  262    ERLLEDSK---GVKELMKQWQDLQGEIEAHTDV----YHNLDENSQKILRSLEGSDDAVL  314
              ER L  SK   G+ E  ++  +   EI A  DV    Y +L +  Q++L     S  A  
Sbjct  20070  ERHLLASKPLGGLPETAREQLNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKS--AET  20243

Query  315    LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPI  374
              + + L+N+  KW  +  K    ++ LE + +     H SLQ+ + WL   +  L+  +  
Sbjct  20244  IDQDLNNLKEKWESVETKLNERKTKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRP  20423

Query  375    GGDFPAVQKQNDVHRAFKRELKT-KEPVI  402
                    V  Q D H+ F  E+ + +E +I
Sbjct  20424  SLILDTVLFQIDEHKVFANEVNSHREQII  20510


 Score = 60.8 bits (146),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 140/566 (24%), Positives = 241/566 (42%), Gaps = 84/566 (14%)
 Frame = +3

Query  45     DINEMIIK-QKATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDE  103
              D+ E ++K QK   + L  +    E+ I   +NL  KT   E +  +  ++  I+  WD 
Sbjct  15192  DVLESLLKDQKDFSKMLSAQSSIYEKTIAEGENLLLKTQGSE-KAALQSQLNTIKTSWDG  15368

Query  104    VQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKK--IT  161
                + ++ R  ++ + L+ + ++ E  E     + + +  LE  K   + +D  + +    
Sbjct  15369  FNKQVKEREDKVKDSLEKALKYKEHVETLRPWIDKCQNNLEEIK---FCLDPTETENSTA  15539

Query  162    ETKQLAKDLRQWQTNVDVANDLALKLL------RDYSADDTR----KVHMITENINA---  208
                K L K++ Q    V++ N+ A  LL      ++   D+ +    K+ M+TE +++   
Sbjct  15540  RLKSLQKEMNQHLGMVELLNNAANSLLSVCEVDKEVITDENKSLIQKIDMVTEQLHSKKF  15719

Query  209    SWRSIHKRVSEREAALEETHRLLQ--QFPLDLEKFLAWLTEAETTANVLQDATRKERLLE  266
              S  ++ ++  E +   +E  R LQ  +  LD+   L     +    +VLQ          
Sbjct  15720  SLENMAQKFKEFQEVSKEAKRQLQCAKEQLDVHDSLGPQAYSNKYLSVLQT---------  15872

Query  267    DSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKW  326
                KG++ L  Q            D+   L ++        +G+ D VLLQ   +++  + 
Sbjct  15873  QQKGLQTLKHQ-----------VDLVKGLAQDLVVEASDSKGTSD-VLLQS--ESLVQEH  16010

Query  327    SELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQND  386
              S L ++     S LE           +++E+       DDEL   AP+G D   +QKQ +
Sbjct  16011  SALSQQVDERCSFLETKLQGIGHFQNTIREMFSQFAEFDDELDSMAPVGRDVETLQKQKE  16190

Query  387    VHRAFKRELKTKEPVIMS---TLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRL  443
                +AF   LK  E +I S     +T ++ L  +  E    L    R+L  E  ++   +L
Sbjct  16191  AIKAF---LKKLEALIASNDNANKTCKMMLAME--ETSPDLIGIKRDL--EALSKQCNKL  16349

Query  444    L-RKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQP  502
              L R QA E                 +++ T+ERL+E      E    L++AE  + S  P
Sbjct  16350  LDRAQARE----------------EQVEGTIERLEEFYSKLKEFSTLLQKAEEHEESQGP  16481

Query  503    VGDLLIDSLQDHLEKVKAL-RGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLST-----  556
              VG +  +++   L   KA  + EI PL+     VN L + L    IQ +    ST     
Sbjct  16482  VG-METETINQQLNVFKAFQKEEIEPLQVKQQDVNWLGQGL----IQSAAKGTSTQGLEH  16646

Query  557    -LEDLNTRWKLLQVAVEDRVRQLHEA  581
               L+D+N RWK L   V  R  QL EA
Sbjct  16647  DLDDVNARWKTLNKKVAQRAAQLQEA  16724


 Score = 52.0 bits (123),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 97/443 (21%), Positives = 181/443 (40%), Gaps = 68/443 (15%)
 Frame = +3

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +   Q
Sbjct  19188  QEELDMVINLGSELIAACGEPDKPIVKKSIDELNSAWESLNKAWKDRVDKLEEAMQAAVQ  19367

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHTDV  291
              +   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE     
Sbjct  19368  YQDGLQAIFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE-----  19523

Query  292    YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                 L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +  
Sbjct  19524  MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQ  19703

Query  352    LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
               +L ELL WL   +  LS Q P+GGD  A++ +   H   + +                +
Sbjct  19704  HALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQND----------------V  19835

Query  412    FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
                 +  +E + K   +  E    E A N+                KL + +  WQ  +++
Sbjct  19836  LAHQSTVEAVNKAGNDLIESSAGEEASNLQN--------------KLEVLNQRWQNVLEK  19973

Query  472    TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKEN  531
              T +R Q       +LD  LRQA+   G  + +   L D+ + HL   K L G     +E 
Sbjct  19974  TEQRKQ-------QLDGALRQAKGFHGEIEDLHQWLTDT-ERHLLASKPLGGLPETAREQ  20129

Query  532    V-SHV---------NDLARQLTTLGIQL---SPYNLSTL-EDLNT---RWKLLQVAVEDR  574
              + +H+          ++ + L   G Q+    P +  T+ +DLN    +W+ ++  + +R
Sbjct  20130  LNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKSAETIDQDLNNLKEKWESVETKLNER  20309

Query  575    VRQLHEA---HRDFGPASQHFLS  594
                +L EA     +F  + Q F++
Sbjct  20310  KTKLEEALNLAMEFHNSLQDFIN  20378


 Score = 49.7 bits (117),  Expect = 0.009, Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 106/237 (44%), Gaps = 1/237 (0%)
 Frame = +3

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW++L +WL   ++ + S+  +  D + I   + + K   + L  +    +      
Sbjct  20676  FHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTG  20855

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              ++LK KTS  +    + D +  ++++WD +      R+ +L E L  S Q+ +A +    
Sbjct  20856  RSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALID  21035

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   I   K   K+L +  ++V      A +L+ + S D
Sbjct  21036  WLYRVEPQLAEDQPVHGDIDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELI-EGSRD  21212

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT  251
              D+  V +  + ++  W ++      ++  LE   R  ++F   +   L WL EAE T
Sbjct  21213  DSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQT  21383


 Score = 49.3 bits (116),  Expect = 0.012, Method: Compositional matrix adjust.
 Identities = 102/506 (20%), Positives = 211/506 (41%), Gaps = 52/506 (10%)
 Frame = +3

Query  87     RTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESW  146
              + +ITD  + +  + D V E L +++  L  M +   ++ E  +EA++ L  A+ +L+  
Sbjct  15639  KEVITDENKSLIQKIDMVTEQLHSKKFSLENMAQKFKEFQEVSKEAKRQLQCAKEQLDVH  15818

Query  147    KE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS-ADDTRKVHMITE  204
                 GP         + +T+Q  K L+  +  VD+   LA  L+ + S +  T  V + +E
Sbjct  15819  DSLGPQAYSNKYLSVLQTQQ--KGLQTLKHQVDLVKGLAQDLVVEASDSKGTSDVLLQSE  15992

Query  205    NINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK-ER  263
              ++     ++ ++V ER + LE   + +  F   + +  +   E +   + +    R  E 
Sbjct  15993  SLVQEHSALSQQVDERCSFLETKLQGIGHFQNTIREMFSQFAEFDDELDSMAPVGRDVET  16172

Query  264    LLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMN  323
              L +  + +K  +K+       +EA      N ++  + +L   E S D + ++R L+ ++
Sbjct  16173  LQKQKEAIKAFLKK-------LEALIASNDNANKTCKMMLAMEETSPDLIGIKRDLEALS  16331

Query  324    FKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQK  383
               + ++L  ++      +E + ++ +  +  L+E    LQ  ++    Q P+G +   + +
Sbjct  16332  KQCNKLLDRAQAREEQVEGTIERLEEFYSKLKEFSTLLQKAEEHEESQGPVGMETETINQ  16511

Query  384    QNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRL  443
              Q +V +AF++E      V    +  +   L +   +G                    T+ 
Sbjct  16512  QLNVFKAFQKEEIEPLQVKQQDVNWLGQGLIQSAAKG------------------TSTQG  16637

Query  444    LRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPV  503
              L    ++VN  W+ LN   A    ++ E L      Q+A + L            SW   
Sbjct  16638  LEHDLDDVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESL-----------LSWMVD  16784

Query  504    GDLLIDSLQDHLEKVKALRGEIAP-------LKENVSHVNDLARQLTTLGIQLSPYN---  553
               + L+ + +    + K ++ +I         L +  S V  + R+   +     P +   
Sbjct  16785  TEELVANQKPPSAEFKVVKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIAATAEPADKVK  16964

Query  554    -LSTLEDLNTRWKLLQVAVEDRVRQL  578
               L  L  L++RW+ L    E R RQL
Sbjct  16965  ILKQLSLLDSRWEALLNKAETRNRQL  17042


>ref|XM_861733.1| PREDICTED: Canis familiaris dystonin, transcript variant 17 (DST), 
mRNA
Length=17644

 Score = 85.5 bits (210),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 136/597 (22%), Positives = 249/597 (41%), Gaps = 72/597 (12%)
 Frame = +3

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  13026  ALGQFQHALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  13205

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
                A  +L   ++ +EA  +  +++E +  +W  V E  + R+QQL+  L+          
Sbjct  13206  NKAGNDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIE  13382

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQW  173
              D  QWL   E    A + LG     AR +L +  E     D         +++ K L Q 
Sbjct  13383  DLHQWLTDTERHLLASKPLGGLPETAREQLNAHMEICAAFDV-------KEEIYKSLMQK  13541

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
                 +         L R   + +T  +     N+   W S+  +++ER+  LEE   L  +
Sbjct  13542  GQQM---------LARCPKSAET--IDQDLNNLKEKWESVETKLNERKTKLEEALNLAME  13688

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYH  293
              F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H +   
Sbjct  13689  FHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSHREQII  13850

Query  294    NLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLS  353
               LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K+ H +
Sbjct  13851  ELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAKQFHEA  14027

Query  354    LQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFL  413
                +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T     
Sbjct  14028  WSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRT-----  14192

Query  414    TEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETL  473
                             R L  +    +    L     E+  +W+ +   S + Q K++E L
Sbjct  14193  --------------GRSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEAL  14330

Query  474    ERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAPLKENV  532
                  +  +A   L   L + E      QPV GD  ID + + ++  K  + E+     +V
Sbjct  14331  LFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKVFQKELGKRTSSV  14504

Query  533    SHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHEAH  582
                +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E H
Sbjct  14505  QALKRSARELIEGSRDDSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFH  14675


 Score = 61.6 bits (148),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 166/389 (42%), Gaps = 23/389 (5%)
 Frame = +3

Query  22     LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
              + DW+ +    + S   +  DLE + + I + K    +  Q++ ++E L   A+ L  K 
Sbjct  12729  IFDWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIEMERLNHQAELLLKKV  12908

Query  82     SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
              + +  +  + D +  ++  WD + E + NR+ +L   L    Q+  A +E    L     
Sbjct  12909  TEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQHALDELLTWLTHTEG  13088

Query  142    KLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHM  201
               L   K       AI+ ++ +   L  D+   Q+ V+  N     L+   + ++   +  
Sbjct  13089  LLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAVNKAGNDLIESSAGEEASNLQN  13268

Query  202    ITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK  261
                E +N  W+++ ++  +R+  L+   R  + F  ++E    WLT+              
Sbjct  13269  KLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIEDLHQWLTDT-------------  13409

Query  262    ERLLEDSK---GVKELMKQWQDLQGEIEAHTDV----YHNLDENSQKILRSLEGSDDAVL  314
              ER L  SK   G+ E  ++  +   EI A  DV    Y +L +  Q++L     S  A  
Sbjct  13410  ERHLLASKPLGGLPETAREQLNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKS--AET  13583

Query  315    LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPI  374
              + + L+N+  KW  +  K    ++ LE + +     H SLQ+ + WL   +  L+  +  
Sbjct  13584  IDQDLNNLKEKWESVETKLNERKTKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRP  13763

Query  375    GGDFPAVQKQNDVHRAFKRELKT-KEPVI  402
                    V  Q D H+ F  E+ + +E +I
Sbjct  13764  SLILDTVLFQIDEHKVFANEVNSHREQII  13850


 Score = 60.8 bits (146),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 140/566 (24%), Positives = 241/566 (42%), Gaps = 84/566 (14%)
 Frame = +3

Query  45     DINEMIIK-QKATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDE  103
              D+ E ++K QK   + L  +    E+ I   +NL  KT   E +  +  ++  I+  WD 
Sbjct  8532   DVLESLLKDQKDFSKMLSAQSSIYEKTIAEGENLLLKTQGSE-KAALQSQLNTIKTSWDG  8708

Query  104    VQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKK--IT  161
                + ++ R  ++ + L+ + ++ E  E     + + +  LE  K   + +D  + +    
Sbjct  8709   FNKQVKEREDKVKDSLEKALKYKEHVETLRPWIDKCQNNLEEIK---FCLDPTETENSTA  8879

Query  162    ETKQLAKDLRQWQTNVDVANDLALKLL------RDYSADDTR----KVHMITENINA---  208
                K L K++ Q    V++ N+ A  LL      ++   D+ +    K+ M+TE +++   
Sbjct  8880   RLKSLQKEMNQHLGMVELLNNAANSLLSVCEVDKEVITDENKSLIQKIDMVTEQLHSKKF  9059

Query  209    SWRSIHKRVSEREAALEETHRLLQ--QFPLDLEKFLAWLTEAETTANVLQDATRKERLLE  266
              S  ++ ++  E +   +E  R LQ  +  LD+   L     +    +VLQ          
Sbjct  9060   SLENMAQKFKEFQEVSKEAKRQLQCAKEQLDVHDSLGPQAYSNKYLSVLQT---------  9212

Query  267    DSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKW  326
                KG++ L  Q            D+   L ++        +G+ D VLLQ   +++  + 
Sbjct  9213   QQKGLQTLKHQ-----------VDLVKGLAQDLVVEASDSKGTSD-VLLQS--ESLVQEH  9350

Query  327    SELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQND  386
              S L ++     S LE           +++E+       DDEL   AP+G D   +QKQ +
Sbjct  9351   SALSQQVDERCSFLETKLQGIGHFQNTIREMFSQFAEFDDELDSMAPVGRDVETLQKQKE  9530

Query  387    VHRAFKRELKTKEPVIMS---TLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRL  443
                +AF   LK  E +I S     +T ++ L  +  E    L    R+L  E  ++   +L
Sbjct  9531   AIKAF---LKKLEALIASNDNANKTCKMMLAME--ETSPDLIGIKRDL--EALSKQCNKL  9689

Query  444    L-RKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQP  502
              L R QA E                 +++ T+ERL+E      E    L++AE  + S  P
Sbjct  9690   LDRAQARE----------------EQVEGTIERLEEFYSKLKEFSTLLQKAEEHEESQGP  9821

Query  503    VGDLLIDSLQDHLEKVKAL-RGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLST-----  556
              VG +  +++   L   KA  + EI PL+     VN L + L    IQ +    ST     
Sbjct  9822   VG-METETINQQLNVFKAFQKEEIEPLQVKQQDVNWLGQGL----IQSAAKGTSTQGLEH  9986

Query  557    -LEDLNTRWKLLQVAVEDRVRQLHEA  581
               L+D+N RWK L   V  R  QL EA
Sbjct  9987   DLDDVNARWKTLNKKVAQRAAQLQEA  10064


 Score = 52.0 bits (123),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 97/443 (21%), Positives = 181/443 (40%), Gaps = 68/443 (15%)
 Frame = +3

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +   Q
Sbjct  12528  QEELDMVINLGSELIAACGEPDKPIVKKSIDELNSAWESLNKAWKDRVDKLEEAMQAAVQ  12707

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHTDV  291
              +   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE     
Sbjct  12708  YQDGLQAIFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE-----  12863

Query  292    YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                 L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +  
Sbjct  12864  MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQ  13043

Query  352    LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
               +L ELL WL   +  LS Q P+GGD  A++ +   H   + +                +
Sbjct  13044  HALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQND----------------V  13175

Query  412    FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
                 +  +E + K   +  E    E A N+                KL + +  WQ  +++
Sbjct  13176  LAHQSTVEAVNKAGNDLIESSAGEEASNLQN--------------KLEVLNQRWQNVLEK  13313

Query  472    TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKEN  531
              T +R Q       +LD  LRQA+   G  + +   L D+ + HL   K L G     +E 
Sbjct  13314  TEQRKQ-------QLDGALRQAKGFHGEIEDLHQWLTDT-ERHLLASKPLGGLPETAREQ  13469

Query  532    V-SHV---------NDLARQLTTLGIQL---SPYNLSTL-EDLNT---RWKLLQVAVEDR  574
              + +H+          ++ + L   G Q+    P +  T+ +DLN    +W+ ++  + +R
Sbjct  13470  LNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKSAETIDQDLNNLKEKWESVETKLNER  13649

Query  575    VRQLHEA---HRDFGPASQHFLS  594
                +L EA     +F  + Q F++
Sbjct  13650  KTKLEEALNLAMEFHNSLQDFIN  13718


 Score = 49.7 bits (117),  Expect = 0.009, Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 106/237 (44%), Gaps = 1/237 (0%)
 Frame = +3

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW++L +WL   ++ + S+  +  D + I   + + K   + L  +    +      
Sbjct  14016  FHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTG  14195

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              ++LK KTS  +    + D +  ++++WD +      R+ +L E L  S Q+ +A +    
Sbjct  14196  RSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALID  14375

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   I   K   K+L +  ++V      A +L+ + S D
Sbjct  14376  WLYRVEPQLAEDQPVHGDIDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELI-EGSRD  14552

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT  251
              D+  V +  + ++  W ++      ++  LE   R  ++F   +   L WL EAE T
Sbjct  14553  DSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQT  14723


 Score = 49.3 bits (116),  Expect = 0.013, Method: Compositional matrix adjust.
 Identities = 102/506 (20%), Positives = 211/506 (41%), Gaps = 52/506 (10%)
 Frame = +3

Query  87     RTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESW  146
              + +ITD  + +  + D V E L +++  L  M +   ++ E  +EA++ L  A+ +L+  
Sbjct  8979   KEVITDENKSLIQKIDMVTEQLHSKKFSLENMAQKFKEFQEVSKEAKRQLQCAKEQLDVH  9158

Query  147    KE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS-ADDTRKVHMITE  204
                 GP         + +T+Q  K L+  +  VD+   LA  L+ + S +  T  V + +E
Sbjct  9159   DSLGPQAYSNKYLSVLQTQQ--KGLQTLKHQVDLVKGLAQDLVVEASDSKGTSDVLLQSE  9332

Query  205    NINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK-ER  263
              ++     ++ ++V ER + LE   + +  F   + +  +   E +   + +    R  E 
Sbjct  9333   SLVQEHSALSQQVDERCSFLETKLQGIGHFQNTIREMFSQFAEFDDELDSMAPVGRDVET  9512

Query  264    LLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMN  323
              L +  + +K  +K+       +EA      N ++  + +L   E S D + ++R L+ ++
Sbjct  9513   LQKQKEAIKAFLKK-------LEALIASNDNANKTCKMMLAMEETSPDLIGIKRDLEALS  9671

Query  324    FKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQK  383
               + ++L  ++      +E + ++ +  +  L+E    LQ  ++    Q P+G +   + +
Sbjct  9672   KQCNKLLDRAQAREEQVEGTIERLEEFYSKLKEFSTLLQKAEEHEESQGPVGMETETINQ  9851

Query  384    QNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRL  443
              Q +V +AF++E      V    +  +   L +   +G                    T+ 
Sbjct  9852   QLNVFKAFQKEEIEPLQVKQQDVNWLGQGLIQSAAKG------------------TSTQG  9977

Query  444    LRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPV  503
              L    ++VN  W+ LN   A    ++ E L      Q+A + L            SW   
Sbjct  9978   LEHDLDDVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESL-----------LSWMVD  10124

Query  504    GDLLIDSLQDHLEKVKALRGEIAP-------LKENVSHVNDLARQLTTLGIQLSPYN---  553
               + L+ + +    + K ++ +I         L +  S V  + R+   +     P +   
Sbjct  10125  TEELVANQKPPSAEFKVVKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIAATAEPADKVK  10304

Query  554    -LSTLEDLNTRWKLLQVAVEDRVRQL  578
               L  L  L++RW+ L    E R RQL
Sbjct  10305  ILKQLSLLDSRWEALLNKAETRNRQL  10382


>ref|XM_861720.1| PREDICTED: Canis familiaris dystonin, transcript variant 16 (DST), 
mRNA
Length=17550

 Score = 85.5 bits (210),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 136/597 (22%), Positives = 249/597 (41%), Gaps = 72/597 (12%)
 Frame = +2

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  12932  ALGQFQHALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  13111

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
                A  +L   ++ +EA  +  +++E +  +W  V E  + R+QQL+  L+          
Sbjct  13112  NKAGNDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIE  13288

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQW  173
              D  QWL   E    A + LG     AR +L +  E     D         +++ K L Q 
Sbjct  13289  DLHQWLTDTERHLLASKPLGGLPETAREQLNAHMEICAAFDV-------KEEIYKSLMQK  13447

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
                 +         L R   + +T  +     N+   W S+  +++ER+  LEE   L  +
Sbjct  13448  GQQM---------LARCPKSAET--IDQDLNNLKEKWESVETKLNERKTKLEEALNLAME  13594

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYH  293
              F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H +   
Sbjct  13595  FHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSHREQII  13756

Query  294    NLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLS  353
               LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K+ H +
Sbjct  13757  ELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAKQFHEA  13933

Query  354    LQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFL  413
                +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T     
Sbjct  13934  WSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRT-----  14098

Query  414    TEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETL  473
                             R L  +    +    L     E+  +W+ +   S + Q K++E L
Sbjct  14099  --------------GRSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEAL  14236

Query  474    ERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAPLKENV  532
                  +  +A   L   L + E      QPV GD  ID + + ++  K  + E+     +V
Sbjct  14237  LFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKVFQKELGKRTSSV  14410

Query  533    SHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHEAH  582
                +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E H
Sbjct  14411  QALKRSARELIEGSRDDSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFH  14581


 Score = 61.6 bits (148),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 166/389 (42%), Gaps = 23/389 (5%)
 Frame = +2

Query  22     LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
              + DW+ +    + S   +  DLE + + I + K    +  Q++ ++E L   A+ L  K 
Sbjct  12635  IFDWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIEMERLNHQAELLLKKV  12814

Query  82     SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
              + +  +  + D +  ++  WD + E + NR+ +L   L    Q+  A +E    L     
Sbjct  12815  TEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQHALDELLTWLTHTEG  12994

Query  142    KLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHM  201
               L   K       AI+ ++ +   L  D+   Q+ V+  N     L+   + ++   +  
Sbjct  12995  LLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAVNKAGNDLIESSAGEEASNLQN  13174

Query  202    ITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK  261
                E +N  W+++ ++  +R+  L+   R  + F  ++E    WLT+              
Sbjct  13175  KLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIEDLHQWLTDT-------------  13315

Query  262    ERLLEDSK---GVKELMKQWQDLQGEIEAHTDV----YHNLDENSQKILRSLEGSDDAVL  314
              ER L  SK   G+ E  ++  +   EI A  DV    Y +L +  Q++L     S  A  
Sbjct  13316  ERHLLASKPLGGLPETAREQLNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKS--AET  13489

Query  315    LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPI  374
              + + L+N+  KW  +  K    ++ LE + +     H SLQ+ + WL   +  L+  +  
Sbjct  13490  IDQDLNNLKEKWESVETKLNERKTKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRP  13669

Query  375    GGDFPAVQKQNDVHRAFKRELKT-KEPVI  402
                    V  Q D H+ F  E+ + +E +I
Sbjct  13670  SLILDTVLFQIDEHKVFANEVNSHREQII  13756


 Score = 60.8 bits (146),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 140/566 (24%), Positives = 241/566 (42%), Gaps = 84/566 (14%)
 Frame = +2

Query  45    DINEMIIK-QKATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDE  103
             D+ E ++K QK   + L  +    E+ I   +NL  KT   E +  +  ++  I+  WD 
Sbjct  8438  DVLESLLKDQKDFSKMLSAQSSIYEKTIAEGENLLLKTQGSE-KAALQSQLNTIKTSWDG  8614

Query  104   VQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKK--IT  161
               + ++ R  ++ + L+ + ++ E  E     + + +  LE  K   + +D  + +    
Sbjct  8615  FNKQVKEREDKVKDSLEKALKYKEHVETLRPWIDKCQNNLEEIK---FCLDPTETENSTA  8785

Query  162   ETKQLAKDLRQWQTNVDVANDLALKLL------RDYSADDTR----KVHMITENINA---  208
               K L K++ Q    V++ N+ A  LL      ++   D+ +    K+ M+TE +++   
Sbjct  8786  RLKSLQKEMNQHLGMVELLNNAANSLLSVCEVDKEVITDENKSLIQKIDMVTEQLHSKKF  8965

Query  209   SWRSIHKRVSEREAALEETHRLLQ--QFPLDLEKFLAWLTEAETTANVLQDATRKERLLE  266
             S  ++ ++  E +   +E  R LQ  +  LD+   L     +    +VLQ          
Sbjct  8966  SLENMAQKFKEFQEVSKEAKRQLQCAKEQLDVHDSLGPQAYSNKYLSVLQT---------  9118

Query  267   DSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKW  326
               KG++ L  Q            D+   L ++        +G+ D VLLQ   +++  + 
Sbjct  9119  QQKGLQTLKHQ-----------VDLVKGLAQDLVVEASDSKGTSD-VLLQS--ESLVQEH  9256

Query  327   SELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQND  386
             S L ++     S LE           +++E+       DDEL   AP+G D   +QKQ +
Sbjct  9257  SALSQQVDERCSFLETKLQGIGHFQNTIREMFSQFAEFDDELDSMAPVGRDVETLQKQKE  9436

Query  387   VHRAFKRELKTKEPVIMS---TLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRL  443
               +AF   LK  E +I S     +T ++ L  +  E    L    R+L  E  ++   +L
Sbjct  9437  AIKAF---LKKLEALIASNDNANKTCKMMLAME--ETSPDLIGIKRDL--EALSKQCNKL  9595

Query  444   L-RKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQP  502
             L R QA E                 +++ T+ERL+E      E    L++AE  + S  P
Sbjct  9596  LDRAQARE----------------EQVEGTIERLEEFYSKLKEFSTLLQKAEEHEESQGP  9727

Query  503   VGDLLIDSLQDHLEKVKAL-RGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLST-----  556
             VG +  +++   L   KA  + EI PL+     VN L + L    IQ +    ST     
Sbjct  9728  VG-METETINQQLNVFKAFQKEEIEPLQVKQQDVNWLGQGL----IQSAAKGTSTQGLEH  9892

Query  557   -LEDLNTRWKLLQVAVEDRVRQLHEA  581
              L+D+N RWK L   V  R  QL EA
Sbjct  9893  DLDDVNARWKTLNKKVAQRAAQLQEA  9970


 Score = 52.0 bits (123),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 97/443 (21%), Positives = 181/443 (40%), Gaps = 68/443 (15%)
 Frame = +2

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +   Q
Sbjct  12434  QEELDMVINLGSELIAACGEPDKPIVKKSIDELNSAWESLNKAWKDRVDKLEEAMQAAVQ  12613

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHTDV  291
              +   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE     
Sbjct  12614  YQDGLQAIFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE-----  12769

Query  292    YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                 L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +  
Sbjct  12770  MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQ  12949

Query  352    LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
               +L ELL WL   +  LS Q P+GGD  A++ +   H   + +                +
Sbjct  12950  HALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQND----------------V  13081

Query  412    FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
                 +  +E + K   +  E    E A N+                KL + +  WQ  +++
Sbjct  13082  LAHQSTVEAVNKAGNDLIESSAGEEASNLQN--------------KLEVLNQRWQNVLEK  13219

Query  472    TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKEN  531
              T +R Q       +LD  LRQA+   G  + +   L D+ + HL   K L G     +E 
Sbjct  13220  TEQRKQ-------QLDGALRQAKGFHGEIEDLHQWLTDT-ERHLLASKPLGGLPETAREQ  13375

Query  532    V-SHV---------NDLARQLTTLGIQL---SPYNLSTL-EDLNT---RWKLLQVAVEDR  574
              + +H+          ++ + L   G Q+    P +  T+ +DLN    +W+ ++  + +R
Sbjct  13376  LNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKSAETIDQDLNNLKEKWESVETKLNER  13555

Query  575    VRQLHEA---HRDFGPASQHFLS  594
                +L EA     +F  + Q F++
Sbjct  13556  KTKLEEALNLAMEFHNSLQDFIN  13624


 Score = 49.7 bits (117),  Expect = 0.009, Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 106/237 (44%), Gaps = 1/237 (0%)
 Frame = +2

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW++L +WL   ++ + S+  +  D + I   + + K   + L  +    +      
Sbjct  13922  FHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTG  14101

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              ++LK KTS  +    + D +  ++++WD +      R+ +L E L  S Q+ +A +    
Sbjct  14102  RSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALID  14281

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   I   K   K+L +  ++V      A +L+ + S D
Sbjct  14282  WLYRVEPQLAEDQPVHGDIDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELI-EGSRD  14458

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT  251
              D+  V +  + ++  W ++      ++  LE   R  ++F   +   L WL EAE T
Sbjct  14459  DSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQT  14629


 Score = 49.3 bits (116),  Expect = 0.013, Method: Compositional matrix adjust.
 Identities = 102/506 (20%), Positives = 211/506 (41%), Gaps = 52/506 (10%)
 Frame = +2

Query  87     RTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESW  146
              + +ITD  + +  + D V E L +++  L  M +   ++ E  +EA++ L  A+ +L+  
Sbjct  8885   KEVITDENKSLIQKIDMVTEQLHSKKFSLENMAQKFKEFQEVSKEAKRQLQCAKEQLDVH  9064

Query  147    KE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS-ADDTRKVHMITE  204
                 GP         + +T+Q  K L+  +  VD+   LA  L+ + S +  T  V + +E
Sbjct  9065   DSLGPQAYSNKYLSVLQTQQ--KGLQTLKHQVDLVKGLAQDLVVEASDSKGTSDVLLQSE  9238

Query  205    NINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK-ER  263
              ++     ++ ++V ER + LE   + +  F   + +  +   E +   + +    R  E 
Sbjct  9239   SLVQEHSALSQQVDERCSFLETKLQGIGHFQNTIREMFSQFAEFDDELDSMAPVGRDVET  9418

Query  264    LLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMN  323
              L +  + +K  +K+       +EA      N ++  + +L   E S D + ++R L+ ++
Sbjct  9419   LQKQKEAIKAFLKK-------LEALIASNDNANKTCKMMLAMEETSPDLIGIKRDLEALS  9577

Query  324    FKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQK  383
               + ++L  ++      +E + ++ +  +  L+E    LQ  ++    Q P+G +   + +
Sbjct  9578   KQCNKLLDRAQAREEQVEGTIERLEEFYSKLKEFSTLLQKAEEHEESQGPVGMETETINQ  9757

Query  384    QNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRL  443
              Q +V +AF++E      V    +  +   L +   +G                    T+ 
Sbjct  9758   QLNVFKAFQKEEIEPLQVKQQDVNWLGQGLIQSAAKG------------------TSTQG  9883

Query  444    LRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPV  503
              L    ++VN  W+ LN   A    ++ E L      Q+A + L            SW   
Sbjct  9884   LEHDLDDVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESL-----------LSWMVD  10030

Query  504    GDLLIDSLQDHLEKVKALRGEIAP-------LKENVSHVNDLARQLTTLGIQLSPYN---  553
               + L+ + +    + K ++ +I         L +  S V  + R+   +     P +   
Sbjct  10031  TEELVANQKPPSAEFKVVKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIAATAEPADKVK  10210

Query  554    -LSTLEDLNTRWKLLQVAVEDRVRQL  578
               L  L  L++RW+ L    E R RQL
Sbjct  10211  ILKQLSLLDSRWEALLNKAETRNRQL  10288


>ref|XM_861709.1| PREDICTED: Canis familiaris dystonin, transcript variant 15 (DST), 
mRNA
Length=16630

 Score = 85.5 bits (210),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 136/597 (22%), Positives = 249/597 (41%), Gaps = 72/597 (12%)
 Frame = +3

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  12012  ALGQFQHALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  12191

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
                A  +L   ++ +EA  +  +++E +  +W  V E  + R+QQL+  L+          
Sbjct  12192  NKAGNDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIE  12368

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQW  173
              D  QWL   E    A + LG     AR +L +  E     D         +++ K L Q 
Sbjct  12369  DLHQWLTDTERHLLASKPLGGLPETAREQLNAHMEICAAFDV-------KEEIYKSLMQK  12527

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
                 +         L R   + +T  +     N+   W S+  +++ER+  LEE   L  +
Sbjct  12528  GQQM---------LARCPKSAET--IDQDLNNLKEKWESVETKLNERKTKLEEALNLAME  12674

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYH  293
              F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H +   
Sbjct  12675  FHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSHREQII  12836

Query  294    NLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLS  353
               LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K+ H +
Sbjct  12837  ELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAKQFHEA  13013

Query  354    LQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFL  413
                +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T     
Sbjct  13014  WSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRT-----  13178

Query  414    TEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETL  473
                             R L  +    +    L     E+  +W+ +   S + Q K++E L
Sbjct  13179  --------------GRSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEAL  13316

Query  474    ERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAPLKENV  532
                  +  +A   L   L + E      QPV GD  ID + + ++  K  + E+     +V
Sbjct  13317  LFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKVFQKELGKRTSSV  13490

Query  533    SHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHEAH  582
                +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E H
Sbjct  13491  QALKRSARELIEGSRDDSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFH  13661


 Score = 61.6 bits (148),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 166/389 (42%), Gaps = 23/389 (5%)
 Frame = +3

Query  22     LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
              + DW+ +    + S   +  DLE + + I + K    +  Q++ ++E L   A+ L  K 
Sbjct  11715  IFDWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIEMERLNHQAELLLKKV  11894

Query  82     SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
              + +  +  + D +  ++  WD + E + NR+ +L   L    Q+  A +E    L     
Sbjct  11895  TEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQHALDELLTWLTHTEG  12074

Query  142    KLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHM  201
               L   K       AI+ ++ +   L  D+   Q+ V+  N     L+   + ++   +  
Sbjct  12075  LLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAVNKAGNDLIESSAGEEASNLQN  12254

Query  202    ITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK  261
                E +N  W+++ ++  +R+  L+   R  + F  ++E    WLT+              
Sbjct  12255  KLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIEDLHQWLTDT-------------  12395

Query  262    ERLLEDSK---GVKELMKQWQDLQGEIEAHTDV----YHNLDENSQKILRSLEGSDDAVL  314
              ER L  SK   G+ E  ++  +   EI A  DV    Y +L +  Q++L     S  A  
Sbjct  12396  ERHLLASKPLGGLPETAREQLNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKS--AET  12569

Query  315    LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPI  374
              + + L+N+  KW  +  K    ++ LE + +     H SLQ+ + WL   +  L+  +  
Sbjct  12570  IDQDLNNLKEKWESVETKLNERKTKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRP  12749

Query  375    GGDFPAVQKQNDVHRAFKRELKT-KEPVI  402
                    V  Q D H+ F  E+ + +E +I
Sbjct  12750  SLILDTVLFQIDEHKVFANEVNSHREQII  12836


 Score = 60.8 bits (146),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 140/566 (24%), Positives = 241/566 (42%), Gaps = 84/566 (14%)
 Frame = +3

Query  45    DINEMIIK-QKATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDE  103
             D+ E ++K QK   + L  +    E+ I   +NL  KT   E +  +  ++  I+  WD 
Sbjct  7518  DVLESLLKDQKDFSKMLSAQSSIYEKTIAEGENLLLKTQGSE-KAALQSQLNTIKTSWDG  7694

Query  104   VQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKK--IT  161
               + ++ R  ++ + L+ + ++ E  E     + + +  LE  K   + +D  + +    
Sbjct  7695  FNKQVKEREDKVKDSLEKALKYKEHVETLRPWIDKCQNNLEEIK---FCLDPTETENSTA  7865

Query  162   ETKQLAKDLRQWQTNVDVANDLALKLL------RDYSADDTR----KVHMITENINA---  208
               K L K++ Q    V++ N+ A  LL      ++   D+ +    K+ M+TE +++   
Sbjct  7866  RLKSLQKEMNQHLGMVELLNNAANSLLSVCEVDKEVITDENKSLIQKIDMVTEQLHSKKF  8045

Query  209   SWRSIHKRVSEREAALEETHRLLQ--QFPLDLEKFLAWLTEAETTANVLQDATRKERLLE  266
             S  ++ ++  E +   +E  R LQ  +  LD+   L     +    +VLQ          
Sbjct  8046  SLENMAQKFKEFQEVSKEAKRQLQCAKEQLDVHDSLGPQAYSNKYLSVLQT---------  8198

Query  267   DSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKW  326
               KG++ L  Q            D+   L ++        +G+ D VLLQ   +++  + 
Sbjct  8199  QQKGLQTLKHQ-----------VDLVKGLAQDLVVEASDSKGTSD-VLLQS--ESLVQEH  8336

Query  327   SELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQND  386
             S L ++     S LE           +++E+       DDEL   AP+G D   +QKQ +
Sbjct  8337  SALSQQVDERCSFLETKLQGIGHFQNTIREMFSQFAEFDDELDSMAPVGRDVETLQKQKE  8516

Query  387   VHRAFKRELKTKEPVIMS---TLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRL  443
               +AF   LK  E +I S     +T ++ L  +  E    L    R+L  E  ++   +L
Sbjct  8517  AIKAF---LKKLEALIASNDNANKTCKMMLAME--ETSPDLIGIKRDL--EALSKQCNKL  8675

Query  444   L-RKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQP  502
             L R QA E                 +++ T+ERL+E      E    L++AE  + S  P
Sbjct  8676  LDRAQARE----------------EQVEGTIERLEEFYSKLKEFSTLLQKAEEHEESQGP  8807

Query  503   VGDLLIDSLQDHLEKVKAL-RGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLST-----  556
             VG +  +++   L   KA  + EI PL+     VN L + L    IQ +    ST     
Sbjct  8808  VG-METETINQQLNVFKAFQKEEIEPLQVKQQDVNWLGQGL----IQSAAKGTSTQGLEH  8972

Query  557   -LEDLNTRWKLLQVAVEDRVRQLHEA  581
              L+D+N RWK L   V  R  QL EA
Sbjct  8973  DLDDVNARWKTLNKKVAQRAAQLQEA  9050


 Score = 52.0 bits (123),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 97/443 (21%), Positives = 181/443 (40%), Gaps = 68/443 (15%)
 Frame = +3

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +   Q
Sbjct  11514  QEELDMVINLGSELIAACGEPDKPIVKKSIDELNSAWESLNKAWKDRVDKLEEAMQAAVQ  11693

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHTDV  291
              +   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE     
Sbjct  11694  YQDGLQAIFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE-----  11849

Query  292    YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                 L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +  
Sbjct  11850  MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQ  12029

Query  352    LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
               +L ELL WL   +  LS Q P+GGD  A++ +   H   + +                +
Sbjct  12030  HALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQND----------------V  12161

Query  412    FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
                 +  +E + K   +  E    E A N+                KL + +  WQ  +++
Sbjct  12162  LAHQSTVEAVNKAGNDLIESSAGEEASNLQN--------------KLEVLNQRWQNVLEK  12299

Query  472    TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKEN  531
              T +R Q       +LD  LRQA+   G  + +   L D+ + HL   K L G     +E 
Sbjct  12300  TEQRKQ-------QLDGALRQAKGFHGEIEDLHQWLTDT-ERHLLASKPLGGLPETAREQ  12455

Query  532    V-SHV---------NDLARQLTTLGIQL---SPYNLSTL-EDLNT---RWKLLQVAVEDR  574
              + +H+          ++ + L   G Q+    P +  T+ +DLN    +W+ ++  + +R
Sbjct  12456  LNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKSAETIDQDLNNLKEKWESVETKLNER  12635

Query  575    VRQLHEA---HRDFGPASQHFLS  594
                +L EA     +F  + Q F++
Sbjct  12636  KTKLEEALNLAMEFHNSLQDFIN  12704


 Score = 49.7 bits (117),  Expect = 0.009, Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 106/237 (44%), Gaps = 1/237 (0%)
 Frame = +3

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW++L +WL   ++ + S+  +  D + I   + + K   + L  +    +      
Sbjct  13002  FHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTG  13181

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              ++LK KTS  +    + D +  ++++WD +      R+ +L E L  S Q+ +A +    
Sbjct  13182  RSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALID  13361

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   I   K   K+L +  ++V      A +L+ + S D
Sbjct  13362  WLYRVEPQLAEDQPVHGDIDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELI-EGSRD  13538

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT  251
              D+  V +  + ++  W ++      ++  LE   R  ++F   +   L WL EAE T
Sbjct  13539  DSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQT  13709


 Score = 49.3 bits (116),  Expect = 0.013, Method: Compositional matrix adjust.
 Identities = 102/506 (20%), Positives = 211/506 (41%), Gaps = 52/506 (10%)
 Frame = +3

Query  87    RTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESW  146
             + +ITD  + +  + D V E L +++  L  M +   ++ E  +EA++ L  A+ +L+  
Sbjct  7965  KEVITDENKSLIQKIDMVTEQLHSKKFSLENMAQKFKEFQEVSKEAKRQLQCAKEQLDVH  8144

Query  147   KE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS-ADDTRKVHMITE  204
                GP         + +T+Q  K L+  +  VD+   LA  L+ + S +  T  V + +E
Sbjct  8145  DSLGPQAYSNKYLSVLQTQQ--KGLQTLKHQVDLVKGLAQDLVVEASDSKGTSDVLLQSE  8318

Query  205   NINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK-ER  263
             ++     ++ ++V ER + LE   + +  F   + +  +   E +   + +    R  E 
Sbjct  8319  SLVQEHSALSQQVDERCSFLETKLQGIGHFQNTIREMFSQFAEFDDELDSMAPVGRDVET  8498

Query  264   LLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMN  323
             L +  + +K  +K+       +EA      N ++  + +L   E S D + ++R L+ ++
Sbjct  8499  LQKQKEAIKAFLKK-------LEALIASNDNANKTCKMMLAMEETSPDLIGIKRDLEALS  8657

Query  324   FKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQK  383
              + ++L  ++      +E + ++ +  +  L+E    LQ  ++    Q P+G +   + +
Sbjct  8658  KQCNKLLDRAQAREEQVEGTIERLEEFYSKLKEFSTLLQKAEEHEESQGPVGMETETINQ  8837

Query  384   QNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRL  443
             Q +V +AF++E      V    +  +   L +   +G                    T+ 
Sbjct  8838  QLNVFKAFQKEEIEPLQVKQQDVNWLGQGLIQSAAKG------------------TSTQG  8963

Query  444   LRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPV  503
             L    ++VN  W+ LN   A    ++ E L      Q+A + L            SW   
Sbjct  8964  LEHDLDDVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESL-----------LSWMVD  9110

Query  504   GDLLIDSLQDHLEKVKALRGEIAP-------LKENVSHVNDLARQLTTLGIQLSPYN---  553
              + L+ + +    + K ++ +I         L +  S V  + R+   +     P +   
Sbjct  9111  TEELVANQKPPSAEFKVVKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIAATAEPADKVK  9290

Query  554   -LSTLEDLNTRWKLLQVAVEDRVRQL  578
              L  L  L++RW+ L    E R RQL
Sbjct  9291  ILKQLSLLDSRWEALLNKAETRNRQL  9368


>ref|XM_861528.1| PREDICTED: Canis familiaris dystonin, transcript variant 2 (DST), 
mRNA
Length=18082

 Score = 85.5 bits (210),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 136/597 (22%), Positives = 249/597 (41%), Gaps = 72/597 (12%)
 Frame = +3

Query  11     ALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEEL  70
              AL  F  A  EL  WL+  + ++  Q+ + GD + I   + K      D+   +  +E +
Sbjct  13464  ALGQFQHALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAV  13643

Query  71     ITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLK----------  120
                A  +L   ++ +EA  +  +++E +  +W  V E  + R+QQL+  L+          
Sbjct  13644  NKAGNDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIE  13820

Query  121    DSTQWLEAKEE---AEQVLG----QARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQW  173
              D  QWL   E    A + LG     AR +L +  E     D         +++ K L Q 
Sbjct  13821  DLHQWLTDTERHLLASKPLGGLPETAREQLNAHMEICAAFDV-------KEEIYKSLMQK  13979

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
                 +         L R   + +T  +     N+   W S+  +++ER+  LEE   L  +
Sbjct  13980  GQQM---------LARCPKSAET--IDQDLNNLKEKWESVETKLNERKTKLEEALNLAME  14126

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYH  293
              F   L+ F+ WLT+AE T NV   A+R   +L+    V   + + +    E+ +H +   
Sbjct  14127  FHNSLQDFINWLTQAEQTLNV---ASRPSLILD---TVLFQIDEHKVFANEVNSHREQII  14288

Query  294    NLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLS  353
               LD+     L+      D VL++  L ++  +W ++ ++ +     L+ +  + K+ H +
Sbjct  14289  ELDKTGTH-LKYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDDARKRAKQFHEA  14465

Query  354    LQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFL  413
                +L+ WL+  +  L  +  I  D   ++ Q   H+ F++ L  K  V  +T  T     
Sbjct  14466  WSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRT-----  14630

Query  414    TEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETL  473
                             R L  +    +    L     E+  +W+ +   S + Q K++E L
Sbjct  14631  --------------GRSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEAL  14768

Query  474    ERLQELQEATDELDLKLRQAEVIKGSWQPV-GDLLIDSLQDHLEKVKALRGEIAPLKENV  532
                  +  +A   L   L + E      QPV GD  ID + + ++  K  + E+     +V
Sbjct  14769  LFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD--IDLVMNLIDNHKVFQKELGKRTSSV  14942

Query  533    SHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKLL-------QVAVEDRVRQLHEAH  582
                +   AR+L       S +    +++L+TRW+ +       Q  +E  +RQ  E H
Sbjct  14943  QALKRSARELIEGSRDDSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFH  15113


 Score = 61.6 bits (148),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 166/389 (42%), Gaps = 23/389 (5%)
 Frame = +3

Query  22     LTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKT  81
              + DW+ +    + S   +  DLE + + I + K    +  Q++ ++E L   A+ L  K 
Sbjct  13167  IFDWVDIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIEMERLNHQAELLLKKV  13346

Query  82     SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA  141
              + +  +  + D +  ++  WD + E + NR+ +L   L    Q+  A +E    L     
Sbjct  13347  TEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQHALDELLTWLTHTEG  13526

Query  142    KLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHM  201
               L   K       AI+ ++ +   L  D+   Q+ V+  N     L+   + ++   +  
Sbjct  13527  LLSEQKPVGGDPKAIEIELAKHHVLQNDVLAHQSTVEAVNKAGNDLIESSAGEEASNLQN  13706

Query  202    ITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK  261
                E +N  W+++ ++  +R+  L+   R  + F  ++E    WLT+              
Sbjct  13707  KLEVLNQRWQNVLEKTEQRKQQLDGALRQAKGFHGEIEDLHQWLTDT-------------  13847

Query  262    ERLLEDSK---GVKELMKQWQDLQGEIEAHTDV----YHNLDENSQKILRSLEGSDDAVL  314
              ER L  SK   G+ E  ++  +   EI A  DV    Y +L +  Q++L     S  A  
Sbjct  13848  ERHLLASKPLGGLPETAREQLNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKS--AET  14021

Query  315    LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPI  374
              + + L+N+  KW  +  K    ++ LE + +     H SLQ+ + WL   +  L+  +  
Sbjct  14022  IDQDLNNLKEKWESVETKLNERKTKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRP  14201

Query  375    GGDFPAVQKQNDVHRAFKRELKT-KEPVI  402
                    V  Q D H+ F  E+ + +E +I
Sbjct  14202  SLILDTVLFQIDEHKVFANEVNSHREQII  14288


 Score = 60.8 bits (146),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 140/566 (24%), Positives = 241/566 (42%), Gaps = 84/566 (14%)
 Frame = +3

Query  45     DINEMIIK-QKATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWDE  103
              D+ E ++K QK   + L  +    E+ I   +NL  KT   E +  +  ++  I+  WD 
Sbjct  8970   DVLESLLKDQKDFSKMLSAQSSIYEKTIAEGENLLLKTQGSE-KAALQSQLNTIKTSWDG  9146

Query  104    VQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKK--IT  161
                + ++ R  ++ + L+ + ++ E  E     + + +  LE  K   + +D  + +    
Sbjct  9147   FNKQVKEREDKVKDSLEKALKYKEHVETLRPWIDKCQNNLEEIK---FCLDPTETENSTA  9317

Query  162    ETKQLAKDLRQWQTNVDVANDLALKLL------RDYSADDTR----KVHMITENINA---  208
                K L K++ Q    V++ N+ A  LL      ++   D+ +    K+ M+TE +++   
Sbjct  9318   RLKSLQKEMNQHLGMVELLNNAANSLLSVCEVDKEVITDENKSLIQKIDMVTEQLHSKKF  9497

Query  209    SWRSIHKRVSEREAALEETHRLLQ--QFPLDLEKFLAWLTEAETTANVLQDATRKERLLE  266
              S  ++ ++  E +   +E  R LQ  +  LD+   L     +    +VLQ          
Sbjct  9498   SLENMAQKFKEFQEVSKEAKRQLQCAKEQLDVHDSLGPQAYSNKYLSVLQT---------  9650

Query  267    DSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKW  326
                KG++ L  Q            D+   L ++        +G+ D VLLQ   +++  + 
Sbjct  9651   QQKGLQTLKHQ-----------VDLVKGLAQDLVVEASDSKGTSD-VLLQS--ESLVQEH  9788

Query  327    SELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQND  386
              S L ++     S LE           +++E+       DDEL   AP+G D   +QKQ +
Sbjct  9789   SALSQQVDERCSFLETKLQGIGHFQNTIREMFSQFAEFDDELDSMAPVGRDVETLQKQKE  9968

Query  387    VHRAFKRELKTKEPVIMS---TLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRL  443
                +AF   LK  E +I S     +T ++ L  +  E    L    R+L  E  ++   +L
Sbjct  9969   AIKAF---LKKLEALIASNDNANKTCKMMLAME--ETSPDLIGIKRDL--EALSKQCNKL  10127

Query  444    L-RKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQP  502
              L R QA E                 +++ T+ERL+E      E    L++AE  + S  P
Sbjct  10128  LDRAQARE----------------EQVEGTIERLEEFYSKLKEFSTLLQKAEEHEESQGP  10259

Query  503    VGDLLIDSLQDHLEKVKAL-RGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLST-----  556
              VG +  +++   L   KA  + EI PL+     VN L + L    IQ +    ST     
Sbjct  10260  VG-METETINQQLNVFKAFQKEEIEPLQVKQQDVNWLGQGL----IQSAAKGTSTQGLEH  10424

Query  557    -LEDLNTRWKLLQVAVEDRVRQLHEA  581
               L+D+N RWK L   V  R  QL EA
Sbjct  10425  DLDDVNARWKTLNKKVAQRAAQLQEA  10502


 Score = 52.0 bits (123),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 97/443 (21%), Positives = 181/443 (40%), Gaps = 68/443 (15%)
 Frame = +3

Query  174    QTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQ  233
              Q  +D+  +L  +L+      D   V    + +N++W S++K   +R   LEE  +   Q
Sbjct  12966  QEELDMVINLGSELIAACGEPDKPIVKKSIDELNSAWESLNKAWKDRVDKLEEAMQAAVQ  13145

Query  234    FPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMKQWQD--LQGEIEAHTDV  291
              +   L+    W+   +     L   +     LE  K   E +KQ++    Q +IE     
Sbjct  13146  YQDGLQAIFDWV---DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIE-----  13301

Query  292    YHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLH  351
                 L+  ++ +L+ +    D   +Q  L  +   W  L ++ +N +  LE +     +  
Sbjct  13302  MERLNHQAELLLKKVTEESDKHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQ  13481

Query  352    LSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRI  411
               +L ELL WL   +  LS Q P+GGD  A++ +   H   + +                +
Sbjct  13482  HALDELLTWLTHTEGLLSEQKPVGGDPKAIEIELAKHHVLQND----------------V  13613

Query  412    FLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDE  471
                 +  +E + K   +  E    E A N+                KL + +  WQ  +++
Sbjct  13614  LAHQSTVEAVNKAGNDLIESSAGEEASNLQN--------------KLEVLNQRWQNVLEK  13751

Query  472    TLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKEN  531
              T +R Q       +LD  LRQA+   G  + +   L D+ + HL   K L G     +E 
Sbjct  13752  TEQRKQ-------QLDGALRQAKGFHGEIEDLHQWLTDT-ERHLLASKPLGGLPETAREQ  13907

Query  532    V-SHV---------NDLARQLTTLGIQL---SPYNLSTL-EDLNT---RWKLLQVAVEDR  574
              + +H+          ++ + L   G Q+    P +  T+ +DLN    +W+ ++  + +R
Sbjct  13908  LNAHMEICAAFDVKEEIYKSLMQKGQQMLARCPKSAETIDQDLNNLKEKWESVETKLNER  14087

Query  575    VRQLHEA---HRDFGPASQHFLS  594
                +L EA     +F  + Q F++
Sbjct  14088  KTKLEEALNLAMEFHNSLQDFIN  14156


 Score = 49.7 bits (117),  Expect = 0.009, Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 106/237 (44%), Gaps = 1/237 (0%)
 Frame = +3

Query  15     FNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAA  74
              F+ AW++L +WL   ++ + S+  +  D + I   + + K   + L  +    +      
Sbjct  14454  FHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHSVYDTTNRTG  14633

Query  75     QNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQ  134
              ++LK KTS  +    + D +  ++++WD +      R+ +L E L  S Q+ +A +    
Sbjct  14634  RSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALID  14813

Query  135    VLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSAD  194
               L +   +L   +     +D +   I   K   K+L +  ++V      A +L+ + S D
Sbjct  14814  WLYRVEPQLAEDQPVHGDIDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELI-EGSRD  14990

Query  195    DTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETT  251
              D+  V +  + ++  W ++      ++  LE   R  ++F   +   L WL EAE T
Sbjct  14991  DSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQT  15161


 Score = 49.3 bits (116),  Expect = 0.013, Method: Compositional matrix adjust.
 Identities = 102/506 (20%), Positives = 211/506 (41%), Gaps = 52/506 (10%)
 Frame = +3

Query  87     RTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESW  146
              + +ITD  + +  + D V E L +++  L  M +   ++ E  +EA++ L  A+ +L+  
Sbjct  9417   KEVITDENKSLIQKIDMVTEQLHSKKFSLENMAQKFKEFQEVSKEAKRQLQCAKEQLDVH  9596

Query  147    KE-GPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYS-ADDTRKVHMITE  204
                 GP         + +T+Q  K L+  +  VD+   LA  L+ + S +  T  V + +E
Sbjct  9597   DSLGPQAYSNKYLSVLQTQQ--KGLQTLKHQVDLVKGLAQDLVVEASDSKGTSDVLLQSE  9770

Query  205    NINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRK-ER  263
              ++     ++ ++V ER + LE   + +  F   + +  +   E +   + +    R  E 
Sbjct  9771   SLVQEHSALSQQVDERCSFLETKLQGIGHFQNTIREMFSQFAEFDDELDSMAPVGRDVET  9950

Query  264    LLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMN  323
              L +  + +K  +K+       +EA      N ++  + +L   E S D + ++R L+ ++
Sbjct  9951   LQKQKEAIKAFLKK-------LEALIASNDNANKTCKMMLAMEETSPDLIGIKRDLEALS  10109

Query  324    FKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQK  383
               + ++L  ++      +E + ++ +  +  L+E    LQ  ++    Q P+G +   + +
Sbjct  10110  KQCNKLLDRAQAREEQVEGTIERLEEFYSKLKEFSTLLQKAEEHEESQGPVGMETETINQ  10289

Query  384    QNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRL  443
              Q +V +AF++E      V    +  +   L +   +G                    T+ 
Sbjct  10290  QLNVFKAFQKEEIEPLQVKQQDVNWLGQGLIQSAAKG------------------TSTQG  10415

Query  444    LRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPV  503
              L    ++VN  W+ LN   A    ++ E L      Q+A + L            SW   
Sbjct  10416  LEHDLDDVNARWKTLNKKVAQRAAQLQEALLHCGRFQDALESL-----------LSWMVD  10562

Query  504    GDLLIDSLQDHLEKVKALRGEIAP-------LKENVSHVNDLARQLTTLGIQLSPYN---  553
               + L+ + +    + K ++ +I         L +  S V  + R+   +     P +   
Sbjct  10563  TEELVANQKPPSAEFKVVKAQIQEQKLLQRLLDDRKSTVEVIKREGEKIAATAEPADKVK  10742

Query  554    -LSTLEDLNTRWKLLQVAVEDRVRQL  578
               L  L  L++RW+ L    E R RQL
Sbjct  10743  ILKQLSLLDSRWEALLNKAETRNRQL  10820


>ref|NM_001144187.1| Drosophila melanogaster short stop (shot), transcript variant 
K, mRNA
Length=17743

 Score = 85.5 bits (210),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 102/502 (20%), Positives = 224/502 (44%), Gaps = 26/502 (5%)
 Frame = +1

Query  29     LDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSNQEART  88
              L++ +  Q       +DI +  +  +    +++Q +P++E++     NL N     + + 
Sbjct  12238  LEETLSCQEPPAAQPQDIKKQQVALQEIRHEIDQTKPEVEQVRRHGSNLMNMCGEPD-KP  12414

Query  89     IITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKE  148
               +   IE + N WD +      R + L + ++ + ++ E  +   + L +A  K      
Sbjct  12415  EVKKHIEDLDNAWDNITALYAKREENLIDAMEKAMEFHETLQNLLKFLTKAEDKFAHLGA  12594

Query  149    GPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINA  208
                  +DA++++I + K    ++      V+  N  A++L    S +    +      +N 
Sbjct  12595  VGSDIDAVKRQIEQLKSFKDEVDPHMVEVEALNRQAVELTERTSPEQAASIREPLSVVNR  12774

Query  209    SWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDS  268
               W ++ + + ER+  LE     L QF   L + L W+ + ++T + L+      +LLE  
Sbjct  12775  RWEALLRGMVERQKQLEHALLHLGQFQHALNELLVWINKTDSTLDQLKPIPGDPQLLE--  12948

Query  269    KGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSE  328
                  EL K  + L  +I+AH +    L++  ++++ + +GS +A   Q +L  +N +W +
Sbjct  12949  ---VELAK-LKVLANDIQAHQNSVDTLNDAGRQLIETEKGSVEASTTQEKLRKLNNEWKQ  13116

Query  329    LRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVH  388
              L +K+ + +  LE +  +       +Q++L WL   D  +    P+GG      +Q +  
Sbjct  13117  LLQKASDRQHELEEALREAHGYIAEVQDILGWLGDVDAVIGASKPVGGLPETATEQLERF  13296

Query  389    RAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQA  448
                   EL    P +    ET++        +G E + ++ +        Q+  R L+++ 
Sbjct  13297  MEVYNELDENRPKV----ETIQA-------QGQEYIKRQNQMKVSSSNLQHTLRTLKQR-  13440

Query  449    EEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLI  508
                    W+ +   ++D + K++  L+   E  +        L QAE +  + +PV  +L 
Sbjct  13441  ------WDAVVSRASDKKIKLEIALKEATEFHDTLQAFVEWLTQAEKLLSNAEPVSRVL-  13599

Query  509    DSLQDHLEKVKALRGEIAPLKE  530
              +++Q  +E+ K L+ +++  +E
Sbjct  13600  ETIQAQMEEHKVLQKDVSTHRE  13665


 Score = 56.2 bits (134),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 101/486 (20%), Positives = 198/486 (40%), Gaps = 54/486 (11%)
 Frame = +1

Query  14     DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITA  73
              +F+       +WL+  ++++ +   +   LE I   + + K   +D+   R  +  L   
Sbjct  13510  EFHDTLQAFVEWLTQAEKLLSNAEPVSRVLETIQAQMEEHKVLQKDVSTHREAMLLLDKK  13689

Query  74     AQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEA-----  128
                +LK  +  Q+   +I + +  +Q++W+ V      R + L+   K++ ++ +A     
Sbjct  13690  GTHLKYFSQKQDV-ILIKNLLVSVQHRWERVVSKAAERTRALDHGYKEAREFNDAWSGMM  13866

Query  129    --KEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALK  186
                 +E EQVL Q   +  + KE       I+K I + K+  + L   Q+  D        
Sbjct  13867  QYLQETEQVLDQIIEEATASKEP----QKIKKYIGKLKETHRQLGAKQSVYDGTMRTGKN  14034

Query  187    LLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
              LL      D   +  +   +   W  +  +  +R+  LEE   L  QF   L + L WL 
Sbjct  14035  LLERAPKGDRPVLDKMLIELKEQWTRVWSKSIDRQRKLEEALLLSGQFSDALGELLDWLK  14214

Query  247    EAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENS---QKIL  303
              +A            K RL E+     +L    + +QG  E H  +  +L + +   Q +L
Sbjct  14215  KA------------KSRLNENGPVHGDL----ETVQGLCEHHKHIEQDLQKRAAQMQGVL  14346

Query  304    ---RSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
                 R LE S +   + R+LD M   W E++         L+ +    ++L+  +Q L  W
Sbjct  14347  KTGRDLERSGNNPEVGRQLDEMQSIWEEVKSAVAKRGERLQVALVDAEKLNARVQALFDW  14526

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              L   + +L        D    ++  D+H  F ++L+ +E     T E     +       
Sbjct  14527  LDHAEHKLRYAKNAPDDEKVSREMMDIHMDFMKDLRVREREKTETFEYAEDIIN------  14688

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
                K Y  P  +P          +++     +   WE++   + + + K+++ L+ L++L 
Sbjct  14689  --KAY--PDAIP----------IIKNWLSIIQQRWEEVRQWAINRESKLEQHLQSLKDLD  14826

Query  481    EATDEL  486
              +  +EL
Sbjct  14827  DTIEEL  14844


 Score = 49.3 bits (116),  Expect = 0.015, Method: Compositional matrix adjust.
 Identities = 83/396 (20%), Positives = 170/396 (42%), Gaps = 42/396 (10%)
 Frame = +1

Query  14     DFNRAWTELTDWLS----LLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEE  69
              +FN AW+ +  +L     +LDQ+I+ +     + + I + I K K T + L  ++   + 
Sbjct  13837  EFNDAWSGMMQYLQETEQVLDQIIE-EATASKEPQKIKKYIGKLKETHRQLGAKQSVYDG  14013

Query  70     LITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAK  129
               +   +NL  +    + R ++   +  ++ QW  V     +R+++L E L  S Q+ +A 
Sbjct  14014  TMRTGKNLLERAPKGD-RPVLDKMLIELKEQWTRVWSKSIDRQRKLEEALLLSGQFSDAL  14190

Query  130    EEAEQVLGQARAKLESWKEGPYTVD--AIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
               E    L +A+++L   + GP   D   +Q      K + +DL++    +       LK 
Sbjct  14191  GELLDWLKKAKSRLN--ENGPVHGDLETVQGLCEHHKHIEQDLQKRAAQMQGV----LKT  14352

Query  188    LRDYS-ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
               RD   + +  +V    + + + W  +   V++R   L+      ++    ++    WL 
Sbjct  14353  GRDLERSGNNPEVGRQLDEMQSIWEEVKSAVAKRGERLQVALVDAEKLNARVQALFDWLD  14532

Query  247    EAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSL  306
               AE      ++A       +D K  +E+M          + H D   +L    ++   + 
Sbjct  14533  HAEHKLRYAKNAP------DDEKVSREMM----------DIHMDFMKDLRVREREKTETF  14664

Query  307    EGSDDAV---------LLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQEL  357
              E ++D +         +++  L  +  +W E+R+ ++N  S LE      K L  +++EL
Sbjct  14665  EYAEDIINKAYPDAIPIIKNWLSIIQQRWEEVRQWAINRESKLEQHLQSLKDLDDTIEEL  14844

Query  358    LVWLQLKDDEL--SRQAPIGGDFPAVQKQNDVHRAF  391
              L WL   +  L   +   +  + P V+K  + H+ F
Sbjct  14845  LAWLSGLEGTLLNLKHEQLPDEIPPVEKLIEDHKEF  14952


 Score = 48.1 bits (113),  Expect = 0.033, Method: Compositional matrix adjust.
 Identities = 67/363 (18%), Positives = 154/363 (42%), Gaps = 25/363 (6%)
 Frame = +1

Query  26     LSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEE----------------  69
              L  L +    Q   + D++D+++   + K    +L+Q R Q E+                
Sbjct  9574   LKALREFYDHQSQTLDDIQDVSDEFKRMKPVGSELDQIRRQQEDFRNFRERKVEPLAINV  9753

Query  70     --LITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLE  127
                +  A ++L     +  + T I   +E++ ++W++++E +  R ++L+  L  S ++ E
Sbjct  9754   DKVNVAGRDLVRSAGSGVSTTAIEKDLEKLNDRWNDLKERMNERDRRLDVALLQSGKFQE  9933

Query  128    AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
              A     + L      + + K        ++ ++ E K L K L   Q ++    +L  ++
Sbjct  9934   ALAGLSKWLSDTEEMVANQKPPSSDYKVVKAQLQEQKFLKKMLLDRQNSMGSLANLGKEV  10113

Query  188    LRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTE  247
                     +   +     ++   + ++     +RE  LEE   + ++F   +     WL  
Sbjct  10114  ANHCEPGERASIEKQLNDLMKRFDALTDGAEQRELDLEEAMEVAKRFHDKISPLELWLDN  10293

Query  248    AETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLE  307
               E +   +      E +  D + +++ +++   L  EI      + +L + + +++  L 
Sbjct  10294  TERSVKAM------ELIPTDEEKIQQRIREHDRLHDEILGKKPDFSDLADVTAQLMH-LV  10452

Query  308    GSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDE  367
                ++AV L  ++  +  +++ L   S NI + L  S    + L LS Q+L+ W++  + E
Sbjct  10453  SDEEAVNLGEKVRGVTERYTGLVDASDNIGALLAESRQGLRHLVLSYQDLVAWMESMEAE  10632

Query  368    LSR  370
              L R
Sbjct  10633  LKR  10641


>gb|M86900.1|HUMDYST17 H.sapiens dystrophin gene, exon 76
Length=287

 Score = 85.5 bits (210),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 42/43 (97%), Positives = 43/43 (100%), Gaps = 0/43 (0%)
 Frame = +2

Query  1127  PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGE  1169
             PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMG+
Sbjct  86    PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGK  214


>dbj|AK157158.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched 
library, clone:F830205H16 product:dystrobrevin, beta, full 
insert sequence
Length=3686

 Score = 85.1 bits (209),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 17/222 (7%)
 Frame = +3

Query  637  DLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDIL--QIINCL  694
            + + +R S YRTA KLR +QK   L L+ +    +A   + L   D   +I   ++   +
Sbjct  291  NFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHSTEISVSRLETVI  470

Query  695  TTIY----DRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAH  750
            ++IY     RL   H   ++V   + + LN+++  YD+   G++ V S K  + ++C   
Sbjct  471  SSIYYQLNKRLPSTHQ--ISVEQSISLLLNFMVAAYDSEGRGKLTVFSVKAMLATMCGGK  644

Query  751  LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA  810
            + DK+RY+F Q++ S G     +L   L +++++P  + E A      I    R+C  + 
Sbjct  645  MLDKWRYIFSQMSDSNGLMMLGKLDQFLKEALKLPTAVFEGA------ILCLHRACSPYL  806

Query  811  NNKPEIEAALFLDWMR---LEPQSMVWLPVLHRVAAAETAKH  849
                E + A ++          Q +VWLP++HR+A  E  +H
Sbjct  807  FFAAEEDNAEYVFRHHDG*FSSQCLVWLPLMHRLAHVENGEH  932


>ref|NM_001144188.1| Drosophila melanogaster short stop (shot), transcript variant 
L, mRNA
Length=17981

 Score = 85.1 bits (209),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 102/502 (20%), Positives = 224/502 (44%), Gaps = 26/502 (5%)
 Frame = +2

Query  29     LDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSNQEART  88
              L++ +  Q       +DI +  +  +    +++Q +P++E++     NL N     + + 
Sbjct  12461  LEETLSCQEPPAAQPQDIKKQQVALQEIRHEIDQTKPEVEQVRRHGSNLMNMCGEPD-KP  12637

Query  89     IITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKE  148
               +   IE + N WD +      R + L + ++ + ++ E  +   + L +A  K      
Sbjct  12638  EVKKHIEDLDNAWDNITALYAKREENLIDAMEKAMEFHETLQNLLKFLTKAEDKFAHLGA  12817

Query  149    GPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINA  208
                  +DA++++I + K    ++      V+  N  A++L    S +    +      +N 
Sbjct  12818  VGSDIDAVKRQIEQLKSFKDEVDPHMVEVEALNRQAVELTERTSPEQAASIREPLSVVNR  12997

Query  209    SWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDS  268
               W ++ + + ER+  LE     L QF   L + L W+ + ++T + L+      +LLE  
Sbjct  12998  RWEALLRGMVERQKQLEHALLHLGQFQHALNELLVWINKTDSTLDQLKPIPGDPQLLE--  13171

Query  269    KGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSE  328
                  EL K  + L  +I+AH +    L++  ++++ + +GS +A   Q +L  +N +W +
Sbjct  13172  ---VELAK-LKVLANDIQAHQNSVDTLNDAGRQLIETEKGSVEASTTQEKLRKLNNEWKQ  13339

Query  329    LRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVH  388
              L +K+ + +  LE +  +       +Q++L WL   D  +    P+GG      +Q +  
Sbjct  13340  LLQKASDRQHELEEALREAHGYIAEVQDILGWLGDVDAVIGASKPVGGLPETATEQLERF  13519

Query  389    RAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQA  448
                   EL    P +    ET++        +G E + ++ +        Q+  R L+++ 
Sbjct  13520  MEVYNELDENRPKV----ETIQA-------QGQEYIKRQNQMKVSSSNLQHTLRTLKQR-  13663

Query  449    EEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLI  508
                    W+ +   ++D + K++  L+   E  +        L QAE +  + +PV  +L 
Sbjct  13664  ------WDAVVSRASDKKIKLEIALKEATEFHDTLQAFVEWLTQAEKLLSNAEPVSRVL-  13822

Query  509    DSLQDHLEKVKALRGEIAPLKE  530
              +++Q  +E+ K L+ +++  +E
Sbjct  13823  ETIQAQMEEHKVLQKDVSTHRE  13888


 Score = 55.8 bits (133),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 101/486 (20%), Positives = 198/486 (40%), Gaps = 54/486 (11%)
 Frame = +2

Query  14     DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITA  73
              +F+       +WL+  ++++ +   +   LE I   + + K   +D+   R  +  L   
Sbjct  13733  EFHDTLQAFVEWLTQAEKLLSNAEPVSRVLETIQAQMEEHKVLQKDVSTHREAMLLLDKK  13912

Query  74     AQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEA-----  128
                +LK  +  Q+   +I + +  +Q++W+ V      R + L+   K++ ++ +A     
Sbjct  13913  GTHLKYFSQKQDV-ILIKNLLVSVQHRWERVVSKAAERTRALDHGYKEAREFNDAWSGMM  14089

Query  129    --KEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALK  186
                 +E EQVL Q   +  + KE       I+K I + K+  + L   Q+  D        
Sbjct  14090  QYLQETEQVLDQIIEEATASKEP----QKIKKYIGKLKETHRQLGAKQSVYDGTMRTGKN  14257

Query  187    LLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
              LL      D   +  +   +   W  +  +  +R+  LEE   L  QF   L + L WL 
Sbjct  14258  LLERAPKGDRPVLDKMLIELKEQWTRVWSKSIDRQRKLEEALLLSGQFSDALGELLDWLK  14437

Query  247    EAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENS---QKIL  303
              +A            K RL E+     +L    + +QG  E H  +  +L + +   Q +L
Sbjct  14438  KA------------KSRLNENGPVHGDL----ETVQGLCEHHKHIEQDLQKRAAQMQGVL  14569

Query  304    ---RSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
                 R LE S +   + R+LD M   W E++         L+ +    ++L+  +Q L  W
Sbjct  14570  KTGRDLERSGNNPEVGRQLDEMQSIWEEVKSAVAKRGERLQVALVDAEKLNARVQALFDW  14749

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              L   + +L        D    ++  D+H  F ++L+ +E     T E     +       
Sbjct  14750  LDHAEHKLRYAKNAPDDEKVSREMMDIHMDFMKDLRVREREKTETFEYAEDIIN------  14911

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
                K Y  P  +P          +++     +   WE++   + + + K+++ L+ L++L 
Sbjct  14912  --KAY--PDAIP----------IIKNWLSIIQQRWEEVRQWAINRESKLEQHLQSLKDLD  15049

Query  481    EATDEL  486
              +  +EL
Sbjct  15050  DTIEEL  15067


 Score = 48.9 bits (115),  Expect = 0.018, Method: Compositional matrix adjust.
 Identities = 83/396 (20%), Positives = 170/396 (42%), Gaps = 42/396 (10%)
 Frame = +2

Query  14     DFNRAWTELTDWLS----LLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEE  69
              +FN AW+ +  +L     +LDQ+I+ +     + + I + I K K T + L  ++   + 
Sbjct  14060  EFNDAWSGMMQYLQETEQVLDQIIE-EATASKEPQKIKKYIGKLKETHRQLGAKQSVYDG  14236

Query  70     LITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAK  129
               +   +NL  +    + R ++   +  ++ QW  V     +R+++L E L  S Q+ +A 
Sbjct  14237  TMRTGKNLLERAPKGD-RPVLDKMLIELKEQWTRVWSKSIDRQRKLEEALLLSGQFSDAL  14413

Query  130    EEAEQVLGQARAKLESWKEGPYTVD--AIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
               E    L +A+++L   + GP   D   +Q      K + +DL++    +       LK 
Sbjct  14414  GELLDWLKKAKSRLN--ENGPVHGDLETVQGLCEHHKHIEQDLQKRAAQMQGV----LKT  14575

Query  188    LRDYS-ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
               RD   + +  +V    + + + W  +   V++R   L+      ++    ++    WL 
Sbjct  14576  GRDLERSGNNPEVGRQLDEMQSIWEEVKSAVAKRGERLQVALVDAEKLNARVQALFDWLD  14755

Query  247    EAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSL  306
               AE      ++A       +D K  +E+M          + H D   +L    ++   + 
Sbjct  14756  HAEHKLRYAKNAP------DDEKVSREMM----------DIHMDFMKDLRVREREKTETF  14887

Query  307    EGSDDAV---------LLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQEL  357
              E ++D +         +++  L  +  +W E+R+ ++N  S LE      K L  +++EL
Sbjct  14888  EYAEDIINKAYPDAIPIIKNWLSIIQQRWEEVRQWAINRESKLEQHLQSLKDLDDTIEEL  15067

Query  358    LVWLQLKDDEL--SRQAPIGGDFPAVQKQNDVHRAF  391
              L WL   +  L   +   +  + P V+K  + H+ F
Sbjct  15068  LAWLSGLEGTLLNLKHEQLPDEIPPVEKLIEDHKEF  15175


 Score = 47.8 bits (112),  Expect = 0.039, Method: Compositional matrix adjust.
 Identities = 67/363 (18%), Positives = 153/363 (42%), Gaps = 25/363 (6%)
 Frame = +2

Query  26     LSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELI--------------  71
              L  L +    Q   + D++D+++   + K    +L+Q R Q E+                
Sbjct  9797   LKALREFYDHQSQTLDDIQDVSDEFKRMKPVGSELDQIRRQQEDFRNFRERKVEPLAINV  9976

Query  72     ----TAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLE  127
                   A ++L     +  + T I   +E++ ++W++++E +  R ++L+  L  S ++ E
Sbjct  9977   DKVNVAGRDLVRSAGSGVSTTAIEKDLEKLNDRWNDLKERMNERDRRLDVALLQSGKFQE  10156

Query  128    AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
              A     + L      + + K        ++ ++ E K L K L   Q ++    +L  ++
Sbjct  10157  ALAGLSKWLSDTEEMVANQKPPSSDYKVVKAQLQEQKFLKKMLLDRQNSMGSLANLGKEV  10336

Query  188    LRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTE  247
                     +   +     ++   + ++     +RE  LEE   + ++F   +     WL  
Sbjct  10337  ANHCEPGERASIEKQLNDLMKRFDALTDGAEQRELDLEEAMEVAKRFHDKISPLELWLDN  10516

Query  248    AETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLE  307
               E +   +      E +  D + +++ +++   L  EI      + +L + + +++  L 
Sbjct  10517  TERSVKAM------ELIPTDEEKIQQRIREHDRLHDEILGKKPDFSDLADVTAQLMH-LV  10675

Query  308    GSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDE  367
                ++AV L  ++  +  +++ L   S NI + L  S    + L LS Q+L+ W++  + E
Sbjct  10676  SDEEAVNLGEKVRGVTERYTGLVDASDNIGALLAESRQGLRHLVLSYQDLVAWMESMEAE  10855

Query  368    LSR  370
              L R
Sbjct  10856  LKR  10864


>ref|NM_001144185.1| Drosophila melanogaster short stop (shot), transcript variant 
I, mRNA
Length=17758

 Score = 85.1 bits (209),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 102/502 (20%), Positives = 224/502 (44%), Gaps = 26/502 (5%)
 Frame = +1

Query  29     LDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSNQEART  88
              L++ +  Q       +DI +  +  +    +++Q +P++E++     NL N     + + 
Sbjct  12238  LEETLSCQEPPAAQPQDIKKQQVALQEIRHEIDQTKPEVEQVRRHGSNLMNMCGEPD-KP  12414

Query  89     IITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKE  148
               +   IE + N WD +      R + L + ++ + ++ E  +   + L +A  K      
Sbjct  12415  EVKKHIEDLDNAWDNITALYAKREENLIDAMEKAMEFHETLQNLLKFLTKAEDKFAHLGA  12594

Query  149    GPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINA  208
                  +DA++++I + K    ++      V+  N  A++L    S +    +      +N 
Sbjct  12595  VGSDIDAVKRQIEQLKSFKDEVDPHMVEVEALNRQAVELTERTSPEQAASIREPLSVVNR  12774

Query  209    SWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDS  268
               W ++ + + ER+  LE     L QF   L + L W+ + ++T + L+      +LLE  
Sbjct  12775  RWEALLRGMVERQKQLEHALLHLGQFQHALNELLVWINKTDSTLDQLKPIPGDPQLLE--  12948

Query  269    KGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSE  328
                  EL K  + L  +I+AH +    L++  ++++ + +GS +A   Q +L  +N +W +
Sbjct  12949  ---VELAK-LKVLANDIQAHQNSVDTLNDAGRQLIETEKGSVEASTTQEKLRKLNNEWKQ  13116

Query  329    LRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVH  388
              L +K+ + +  LE +  +       +Q++L WL   D  +    P+GG      +Q +  
Sbjct  13117  LLQKASDRQHELEEALREAHGYIAEVQDILGWLGDVDAVIGASKPVGGLPETATEQLERF  13296

Query  389    RAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQA  448
                   EL    P +    ET++        +G E + ++ +        Q+  R L+++ 
Sbjct  13297  MEVYNELDENRPKV----ETIQA-------QGQEYIKRQNQMKVSSSNLQHTLRTLKQR-  13440

Query  449    EEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLI  508
                    W+ +   ++D + K++  L+   E  +        L QAE +  + +PV  +L 
Sbjct  13441  ------WDAVVSRASDKKIKLEIALKEATEFHDTLQAFVEWLTQAEKLLSNAEPVSRVL-  13599

Query  509    DSLQDHLEKVKALRGEIAPLKE  530
              +++Q  +E+ K L+ +++  +E
Sbjct  13600  ETIQAQMEEHKVLQKDVSTHRE  13665


 Score = 55.8 bits (133),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 101/486 (20%), Positives = 198/486 (40%), Gaps = 54/486 (11%)
 Frame = +1

Query  14     DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITA  73
              +F+       +WL+  ++++ +   +   LE I   + + K   +D+   R  +  L   
Sbjct  13510  EFHDTLQAFVEWLTQAEKLLSNAEPVSRVLETIQAQMEEHKVLQKDVSTHREAMLLLDKK  13689

Query  74     AQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEA-----  128
                +LK  +  Q+   +I + +  +Q++W+ V      R + L+   K++ ++ +A     
Sbjct  13690  GTHLKYFSQKQDV-ILIKNLLVSVQHRWERVVSKAAERTRALDHGYKEAREFNDAWSGMM  13866

Query  129    --KEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALK  186
                 +E EQVL Q   +  + KE       I+K I + K+  + L   Q+  D        
Sbjct  13867  QYLQETEQVLDQIIEEATASKEP----QKIKKYIGKLKETHRQLGAKQSVYDGTMRTGKN  14034

Query  187    LLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
              LL      D   +  +   +   W  +  +  +R+  LEE   L  QF   L + L WL 
Sbjct  14035  LLERAPKGDRPVLDKMLIELKEQWTRVWSKSIDRQRKLEEALLLSGQFSDALGELLDWLK  14214

Query  247    EAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENS---QKIL  303
              +A            K RL E+     +L    + +QG  E H  +  +L + +   Q +L
Sbjct  14215  KA------------KSRLNENGPVHGDL----ETVQGLCEHHKHIEQDLQKRAAQMQGVL  14346

Query  304    ---RSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
                 R LE S +   + R+LD M   W E++         L+ +    ++L+  +Q L  W
Sbjct  14347  KTGRDLERSGNNPEVGRQLDEMQSIWEEVKSAVAKRGERLQVALVDAEKLNARVQALFDW  14526

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              L   + +L        D    ++  D+H  F ++L+ +E     T E     +       
Sbjct  14527  LDHAEHKLRYAKNAPDDEKVSREMMDIHMDFMKDLRVREREKTETFEYAEDIIN------  14688

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
                K Y  P  +P          +++     +   WE++   + + + K+++ L+ L++L 
Sbjct  14689  --KAY--PDAIP----------IIKNWLSIIQQRWEEVRQWAINRESKLEQHLQSLKDLD  14826

Query  481    EATDEL  486
              +  +EL
Sbjct  14827  DTIEEL  14844


 Score = 48.9 bits (115),  Expect = 0.018, Method: Compositional matrix adjust.
 Identities = 83/396 (20%), Positives = 170/396 (42%), Gaps = 42/396 (10%)
 Frame = +1

Query  14     DFNRAWTELTDWLS----LLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEE  69
              +FN AW+ +  +L     +LDQ+I+ +     + + I + I K K T + L  ++   + 
Sbjct  13837  EFNDAWSGMMQYLQETEQVLDQIIE-EATASKEPQKIKKYIGKLKETHRQLGAKQSVYDG  14013

Query  70     LITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAK  129
               +   +NL  +    + R ++   +  ++ QW  V     +R+++L E L  S Q+ +A 
Sbjct  14014  TMRTGKNLLERAPKGD-RPVLDKMLIELKEQWTRVWSKSIDRQRKLEEALLLSGQFSDAL  14190

Query  130    EEAEQVLGQARAKLESWKEGPYTVD--AIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
               E    L +A+++L   + GP   D   +Q      K + +DL++    +       LK 
Sbjct  14191  GELLDWLKKAKSRLN--ENGPVHGDLETVQGLCEHHKHIEQDLQKRAAQMQGV----LKT  14352

Query  188    LRDYS-ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
               RD   + +  +V    + + + W  +   V++R   L+      ++    ++    WL 
Sbjct  14353  GRDLERSGNNPEVGRQLDEMQSIWEEVKSAVAKRGERLQVALVDAEKLNARVQALFDWLD  14532

Query  247    EAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSL  306
               AE      ++A       +D K  +E+M          + H D   +L    ++   + 
Sbjct  14533  HAEHKLRYAKNAP------DDEKVSREMM----------DIHMDFMKDLRVREREKTETF  14664

Query  307    EGSDDAV---------LLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQEL  357
              E ++D +         +++  L  +  +W E+R+ ++N  S LE      K L  +++EL
Sbjct  14665  EYAEDIINKAYPDAIPIIKNWLSIIQQRWEEVRQWAINRESKLEQHLQSLKDLDDTIEEL  14844

Query  358    LVWLQLKDDEL--SRQAPIGGDFPAVQKQNDVHRAF  391
              L WL   +  L   +   +  + P V+K  + H+ F
Sbjct  14845  LAWLSGLEGTLLNLKHEQLPDEIPPVEKLIEDHKEF  14952


 Score = 47.8 bits (112),  Expect = 0.039, Method: Compositional matrix adjust.
 Identities = 67/363 (18%), Positives = 153/363 (42%), Gaps = 25/363 (6%)
 Frame = +1

Query  26     LSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELI--------------  71
              L  L +    Q   + D++D+++   + K    +L+Q R Q E+                
Sbjct  9574   LKALREFYDHQSQTLDDIQDVSDEFKRMKPVGSELDQIRRQQEDFRNFRERKVEPLAINV  9753

Query  72     ----TAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLE  127
                   A ++L     +  + T I   +E++ ++W++++E +  R ++L+  L  S ++ E
Sbjct  9754   DKVNVAGRDLVRSAGSGVSTTAIEKDLEKLNDRWNDLKERMNERDRRLDVALLQSGKFQE  9933

Query  128    AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
              A     + L      + + K        ++ ++ E K L K L   Q ++    +L  ++
Sbjct  9934   ALAGLSKWLSDTEEMVANQKPPSSDYKVVKAQLQEQKFLKKMLLDRQNSMGSLANLGKEV  10113

Query  188    LRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTE  247
                     +   +     ++   + ++     +RE  LEE   + ++F   +     WL  
Sbjct  10114  ANHCEPGERASIEKQLNDLMKRFDALTDGAEQRELDLEEAMEVAKRFHDKISPLELWLDN  10293

Query  248    AETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLE  307
               E +   +      E +  D + +++ +++   L  EI      + +L + + +++  L 
Sbjct  10294  TERSVKAM------ELIPTDEEKIQQRIREHDRLHDEILGKKPDFSDLADVTAQLMH-LV  10452

Query  308    GSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDE  367
                ++AV L  ++  +  +++ L   S NI + L  S    + L LS Q+L+ W++  + E
Sbjct  10453  SDEEAVNLGEKVRGVTERYTGLVDASDNIGALLAESRQGLRHLVLSYQDLVAWMESMEAE  10632

Query  368    LSR  370
              L R
Sbjct  10633  LKR  10641


>ref|NM_166019.1| Drosophila melanogaster short stop (shot), transcript variant 
H, mRNA
Length=27845

 Score = 85.1 bits (209),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 102/502 (20%), Positives = 224/502 (44%), Gaps = 26/502 (5%)
 Frame = +2

Query  29     LDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSNQEART  88
              L++ +  Q       +DI +  +  +    +++Q +P++E++     NL N     + + 
Sbjct  22280  LEETLSCQEPPAAQPQDIKKQQVALQEIRHEIDQTKPEVEQVRRHGSNLMNMCGEPD-KP  22456

Query  89     IITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKE  148
               +   IE + N WD +      R + L + ++ + ++ E  +   + L +A  K      
Sbjct  22457  EVKKHIEDLDNAWDNITALYAKREENLIDAMEKAMEFHETLQNLLKFLTKAEDKFAHLGA  22636

Query  149    GPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINA  208
                  +DA++++I + K    ++      V+  N  A++L    S +    +      +N 
Sbjct  22637  VGSDIDAVKRQIEQLKSFKDEVDPHMVEVEALNRQAVELTERTSPEQAASIREPLSVVNR  22816

Query  209    SWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDS  268
               W ++ + + ER+  LE     L QF   L + L W+ + ++T + L+      +LLE  
Sbjct  22817  RWEALLRGMVERQKQLEHALLHLGQFQHALNELLVWINKTDSTLDQLKPIPGDPQLLE--  22990

Query  269    KGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSE  328
                  EL K  + L  +I+AH +    L++  ++++ + +GS +A   Q +L  +N +W +
Sbjct  22991  ---VELAK-LKVLANDIQAHQNSVDTLNDAGRQLIETEKGSVEASTTQEKLRKLNNEWKQ  23158

Query  329    LRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVH  388
              L +K+ + +  LE +  +       +Q++L WL   D  +    P+GG      +Q +  
Sbjct  23159  LLQKASDRQHELEEALREAHGYIAEVQDILGWLGDVDAVIGASKPVGGLPETATEQLERF  23338

Query  389    RAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQA  448
                   EL    P +    ET++        +G E + ++ +        Q+  R L+++ 
Sbjct  23339  MEVYNELDENRPKV----ETIQA-------QGQEYIKRQNQMKVSSSNLQHTLRTLKQR-  23482

Query  449    EEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLI  508
                    W+ +   ++D + K++  L+   E  +        L QAE +  + +PV  +L 
Sbjct  23483  ------WDAVVSRASDKKIKLEIALKEATEFHDTLQAFVEWLTQAEKLLSNAEPVSRVL-  23641

Query  509    DSLQDHLEKVKALRGEIAPLKE  530
              +++Q  +E+ K L+ +++  +E
Sbjct  23642  ETIQAQMEEHKVLQKDVSTHRE  23707


 Score = 55.8 bits (133),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 101/486 (20%), Positives = 198/486 (40%), Gaps = 54/486 (11%)
 Frame = +2

Query  14     DFNRAWTELTDWLSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITA  73
              +F+       +WL+  ++++ +   +   LE I   + + K   +D+   R  +  L   
Sbjct  23552  EFHDTLQAFVEWLTQAEKLLSNAEPVSRVLETIQAQMEEHKVLQKDVSTHREAMLLLDKK  23731

Query  74     AQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEA-----  128
                +LK  +  Q+   +I + +  +Q++W+ V      R + L+   K++ ++ +A     
Sbjct  23732  GTHLKYFSQKQDV-ILIKNLLVSVQHRWERVVSKAAERTRALDHGYKEAREFNDAWSGMM  23908

Query  129    --KEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALK  186
                 +E EQVL Q   +  + KE       I+K I + K+  + L   Q+  D        
Sbjct  23909  QYLQETEQVLDQIIEEATASKEP----QKIKKYIGKLKETHRQLGAKQSVYDGTMRTGKN  24076

Query  187    LLRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
              LL      D   +  +   +   W  +  +  +R+  LEE   L  QF   L + L WL 
Sbjct  24077  LLERAPKGDRPVLDKMLIELKEQWTRVWSKSIDRQRKLEEALLLSGQFSDALGELLDWLK  24256

Query  247    EAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENS---QKIL  303
              +A            K RL E+     +L    + +QG  E H  +  +L + +   Q +L
Sbjct  24257  KA------------KSRLNENGPVHGDL----ETVQGLCEHHKHIEQDLQKRAAQMQGVL  24388

Query  304    ---RSLEGSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVW  360
                 R LE S +   + R+LD M   W E++         L+ +    ++L+  +Q L  W
Sbjct  24389  KTGRDLERSGNNPEVGRQLDEMQSIWEEVKSAVAKRGERLQVALVDAEKLNARVQALFDW  24568

Query  361    LQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQPLEG  420
              L   + +L        D    ++  D+H  F ++L+ +E     T E     +       
Sbjct  24569  LDHAEHKLRYAKNAPDDEKVSREMMDIHMDFMKDLRVREREKTETFEYAEDIIN------  24730

Query  421    LEKLYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLERLQELQ  480
                K Y  P  +P          +++     +   WE++   + + + K+++ L+ L++L 
Sbjct  24731  --KAY--PDAIP----------IIKNWLSIIQQRWEEVRQWAINRESKLEQHLQSLKDLD  24868

Query  481    EATDEL  486
              +  +EL
Sbjct  24869  DTIEEL  24886


 Score = 48.5 bits (114),  Expect = 0.021, Method: Compositional matrix adjust.
 Identities = 83/396 (20%), Positives = 170/396 (42%), Gaps = 42/396 (10%)
 Frame = +2

Query  14     DFNRAWTELTDWLS----LLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEE  69
              +FN AW+ +  +L     +LDQ+I+ +     + + I + I K K T + L  ++   + 
Sbjct  23879  EFNDAWSGMMQYLQETEQVLDQIIE-EATASKEPQKIKKYIGKLKETHRQLGAKQSVYDG  24055

Query  70     LITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAK  129
               +   +NL  +    + R ++   +  ++ QW  V     +R+++L E L  S Q+ +A 
Sbjct  24056  TMRTGKNLLERAPKGD-RPVLDKMLIELKEQWTRVWSKSIDRQRKLEEALLLSGQFSDAL  24232

Query  130    EEAEQVLGQARAKLESWKEGPYTVD--AIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
               E    L +A+++L   + GP   D   +Q      K + +DL++    +       LK 
Sbjct  24233  GELLDWLKKAKSRLN--ENGPVHGDLETVQGLCEHHKHIEQDLQKRAAQMQGV----LKT  24394

Query  188    LRDYS-ADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLT  246
               RD   + +  +V    + + + W  +   V++R   L+      ++    ++    WL 
Sbjct  24395  GRDLERSGNNPEVGRQLDEMQSIWEEVKSAVAKRGERLQVALVDAEKLNARVQALFDWLD  24574

Query  247    EAETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSL  306
               AE      ++A       +D K  +E+M          + H D   +L    ++   + 
Sbjct  24575  HAEHKLRYAKNAP------DDEKVSREMM----------DIHMDFMKDLRVREREKTETF  24706

Query  307    EGSDDAV---------LLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQEL  357
              E ++D +         +++  L  +  +W E+R+ ++N  S LE      K L  +++EL
Sbjct  24707  EYAEDIINKAYPDAIPIIKNWLSIIQQRWEEVRQWAINRESKLEQHLQSLKDLDDTIEEL  24886

Query  358    LVWLQLKDDEL--SRQAPIGGDFPAVQKQNDVHRAF  391
              L WL   +  L   +   +  + P V+K  + H+ F
Sbjct  24887  LAWLSGLEGTLLNLKHEQLPDEIPPVEKLIEDHKEF  24994


 Score = 47.8 bits (112),  Expect = 0.041, Method: Compositional matrix adjust.
 Identities = 67/363 (18%), Positives = 154/363 (42%), Gaps = 25/363 (6%)
 Frame = +2

Query  26     LSLLDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEE----------------  69
              L  L +    Q   + D++D+++   + K    +L+Q R Q E+                
Sbjct  19616  LKALREFYDHQSQTLDDIQDVSDEFKRMKPVGSELDQIRRQQEDFRNFRERKVEPLAINV  19795

Query  70     --LITAAQNLKNKTSNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLE  127
                +  A ++L     +  + T I   +E++ ++W++++E +  R ++L+  L  S ++ E
Sbjct  19796  DKVNVAGRDLVRSAGSGVSTTAIEKDLEKLNDRWNDLKERMNERDRRLDVALLQSGKFQE  19975

Query  128    AKEEAEQVLGQARAKLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKL  187
              A     + L      + + K        ++ ++ E K L K L   Q ++    +L  ++
Sbjct  19976  ALAGLSKWLSDTEEMVANQKPPSSDYKVVKAQLQEQKFLKKMLLDRQNSMGSLANLGKEV  20155

Query  188    LRDYSADDTRKVHMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTE  247
                     +   +     ++   + ++     +RE  LEE   + ++F   +     WL  
Sbjct  20156  ANHCEPGERASIEKQLNDLMKRFDALTDGAEQRELDLEEAMEVAKRFHDKISPLELWLDN  20335

Query  248    AETTANVLQDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLE  307
               E +   +      E +  D + +++ +++   L  EI      + +L + + +++  L 
Sbjct  20336  TERSVKAM------ELIPTDEEKIQQRIREHDRLHDEILGKKPDFSDLADVTAQLMH-LV  20494

Query  308    GSDDAVLLQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDE  367
                ++AV L  ++  +  +++ L   S NI + L  S    + L LS Q+L+ W++  + E
Sbjct  20495  SDEEAVNLGEKVRGVTERYTGLVDASDNIGALLAESRQGLRHLVLSYQDLVAWMESMEAE  20674

Query  368    LSR  370
              L R
Sbjct  20675  LKR  20683


>ref|XM_002090815.1| Drosophila yakuba GE13333 (Dyak\GE13333), mRNA
Length=26415

 Score = 84.7 bits (208),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 102/502 (20%), Positives = 224/502 (44%), Gaps = 26/502 (5%)
 Frame = +1

Query  29     LDQVIKSQRVMVGDLEDINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSNQEART  88
              L++ +  Q       +DI +  +  +    +++Q +P++E++     NL N     + + 
Sbjct  21979  LEETLSCQEPPAAQPQDIKKQQVALQEIRHEIDQTKPEVEQVRRHGSNLMNMCGEPD-KP  22155

Query  89     IITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKE  148
               +   IE + N WD +      R + L + ++ + ++ E  +   + L +A  K      
Sbjct  22156  EVKKHIEDLDNAWDNITALYAKREENLIDAMEKAMEFHETLQNLLKFLTKAEDKFAHLGA  22335

Query  149    GPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINA  208
                  +DA++++I + K    ++      V+  N  A++L    S +    +      +N 
Sbjct  22336  VGSDIDAVKRQIEQLKSFKDEVDPHMVEVEALNRQAVELTERTSPEQAASIREPLSVVNR  22515

Query  209    SWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDS  268
               W ++ + + ER+  LE     L QF   L + L W+ + ++T + L+      +LLE  
Sbjct  22516  RWEALLRGMVERQKQLEHALLHLGQFQHALNELLVWINKTDSTLDQLKPIPGDPQLLE--  22689

Query  269    KGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSE  328
                  EL K  + L  +I+AH +    L++  ++++ + +GS +A   Q +L  +N +W +
Sbjct  22690  ---VELAK-LKVLANDIQAHQNSVDTLNDAGRQLIETEKGSVEASTTQEKLRKLNNEWKQ  22857

Query  329    LRKKSLNIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVH  388
              L +K+ + +  LE +  +       +Q++L WL   D  +    P+GG      +Q +  
Sbjct  22858  LLQKASDRQHELEEALREAHGYIAEVQDILGWLGDVDAVIGASKPVGGLPETATEQLERF  23037

Query  389    RAFKRELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQA  448
                   EL    P +    ET++        +G E + ++ +        Q+  R L+++ 
Sbjct  23038  MEVYNELDENRPKV----ETIQA-------QGQEYIKRQNQMKVSSSNLQHTLRTLKQR-  23181

Query  449    EEVNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLI  508
                    W+ +   ++D + K++  L+   E  +        L QAE +  + +PV  +L 
Sbjct  23182  ------WDAVVSRASDKKIKLEIALKEATEFHDTLQAFVEWLTQAEKLLSNAEPVSRVL-  23340

Query  509    DSLQDHLEKVKALRGEIAPLKE  530
              +++Q  +E+ K L+ +++  +E
Sbjct  23341  ETIQAQMEEHKVLQKDVSTHRE  23406



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  May 26, 2009  5:42 PM
  Number of letters in database: 1,583,934,596
  Number of sequences in database:  8,742,655

Lambda     K      H
   0.315    0.130    0.377 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 8742655
Number of Hits to DB: 1847194189
Number of extensions: 27373293
Number of successful extensions: 148679
Number of sequences better than 100: 312
Number of HSP's better than 100 without gapping: 0
Number of HSP's gapped: 147951
Number of HSP's successfully gapped: 535
Length of query: 1230
Length of database: 27353738372
Length adjustment: 158
Effective length of query: 1072
Effective length of database: 7736573300
Effective search space: 8293606577600
Effective search space used: 8293606577600
T: 13
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 83 (36.6 bits)