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Query= AE000111.1 Escherichia coli K-12 MG1655 section 1 of 400 of the
complete genome
(720 letters)
>AK1H_ECOLI P00561 Bifunctional aspartokinase/homoserine
dehydrogenase I (AKI-HDI) [Includes: Aspartokinase I ;
Homoserine dehydrogenase I ]
Length = 820
Score = 248 bits (634), Expect = 2e-70
Identities = 128/128 (100%), Positives = 128/128 (100%)
Frame = -1
Query: 384 MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKITNHLVAMIEKTISGQDA 205
MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKITNHLVAMIEKTISGQDA
Sbjct: 1 MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKITNHLVAMIEKTISGQDA 60
Query: 204 LPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIKHVLHGISLLGQCPDSINA 25
LPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIKHVLHGISLLGQCPDSINA
Sbjct: 61 LPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIKHVLHGISLLGQCPDSINA 120
Query: 24 ALICRGEK 1
ALICRGEK
Sbjct: 121 ALICRGEK 128
Score = 19.2 bits (38), Expect = 0.29
Identities = 15/57 (26%), Positives = 28/57 (48%)
Frame = -1
Query: 420 LFFSTKGNEVTTMRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKITN 250
+ F+T ++V + V+ GG A E+ R L++ +V V ++ A +TN
Sbjct: 458 MLFNT--DQVIEVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKALLTN 512
Score = 18.5 bits (36), Expect = 0.49
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = -1
Query: 360 TSVANAERFLRVADILESNARQGQVATVLSAPAKITNHLVAM 235
T + E+ L V LES + ++A +H+V M
Sbjct: 146 TVIDPVEKLLAVGHYLESTVDIAESTRRIAASRIPADHMVLM 187
Score = 17.7 bits (34), Expect = 0.84
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = -1
Query: 267 PAKITNHLVAMIEKTISGQDALPNISDAERIFAEL 163
P K ++L M ++SG + A R+FA +
Sbjct: 305 PVKGISNLNNMAMFSVSGPGMKGMVGMAARVFAAM 339
Score = 15.0 bits (27), Expect = 5.5
Identities = 5/14 (35%), Positives = 8/14 (56%)
Frame = -3
Query: 388 NHASVEVRRYISGK 347
NH + + ISG+
Sbjct: 45 NHLVAMIEKTISGQ 58
Score = 15.0 bits (27), Expect = 5.5
Identities = 5/7 (71%), Positives = 7/7 (99%)
Frame = +1
Query: 640 PVQKLLS 660
PV+KLL+
Sbjct: 150 PVEKLLA 156
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1264
Number of Sequences: 0
Number of extensions: 25
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 820
effective HSP length: 33
effective length of database: 787
effective search space used: 162122
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 25 (14.3 bits)
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