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Query=
(15 letters)
>WAN03UHTX_1 pSMED2_VHP_GVHS-001 Homo sapiens
Length = 2367
Score = 42.4 bits (98), Expect = 4e-09
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -1
Query: 1 EPKSCDKTHTCPPCP 15
EPKSCDKTHTCPPCP
Sbjct: 990 EPKSCDKTHTCPPCP 946
Score = 19.6 bits (39), Expect = 0.026
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = -1
Query: 7 KTHTCPPCP 15
+ H C PCP
Sbjct: 390 ENHRCTPCP 364
Score = 16.9 bits (32), Expect = 0.17
Identities = 5/10 (50%), Positives = 6/10 (60%)
Frame = +2
Query: 5 CDKTHTCPPC 14
C + TC PC
Sbjct: 542 CWRPCTCTPC 571
Score = 16.5 bits (31), Expect = 0.22
Identities = 6/12 (50%), Positives = 6/12 (50%)
Frame = +3
Query: 2 PKSCDKTHTCPP 13
P SC T C P
Sbjct: 2154 PDSCSCT*ECTP 2189
Score = 15.8 bits (29), Expect = 0.37
Identities = 5/12 (41%), Positives = 5/12 (41%)
Frame = +1
Query: 4 SCDKTHTCPPCP 15
SC C P P
Sbjct: 250 SCSPAAHCSPTP 285
Lambda K H
0.316 0.138 0.541
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 303
Number of Sequences: 0
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 15
length of database: 789
effective HSP length: 0
effective length of query: 24
effective length of database: 789
effective search space: 18936
effective search space used: 18936
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 17 (10.6 bits)
S2: 17 (11.2 bits)
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