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BLASTX 2.0MP-WashU [04-May-2006] [linux26-x64-I32LPF64 2006-05-10T17:22:28]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Gish, Warren and David J. States (1993). Identification of protein coding
regions by database similarity search. Nat. Genet. 3:266-72.
Query= MySampleSeq
(14,601 letters)
Translating both strands of query sequence in all 6 reading frames
Database: UNIPROT_B9GCX0
1 sequences; 3829 total letters.
Searching done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROT:B9GCX0 |B9GCX0|B9GCX0|SubName: Full=Putative unch... 7596 0. 11
>UNIPROT:B9GCX0 |B9GCX0|B9GCX0|SubName: Full=Putative uncharacterized protein;
|Oryza sativa subsp japonica (Rice) |AA|3829
Length = 3829
Minus Strand HSPs:
Score = 7596 (2679.0 bits), Expect = 0., Sum P(11) = 0., Group = 1
Identities = 1533/2058 (74%), Positives = 1675/2058 (81%), Frame = -2
Query: 10205 PGQTSDKGKSSNLCVIHIPDMHLQKEDDLSILKQCVDKFNVPPEHRFALLTRIRYARAFN 10026
P Q+SDK K SNLCVIHIPD+HLQKEDDLSILKQCVDKFNVP EHRF+L TRIRYA AFN
Sbjct: 435 PDQSSDKAKPSNLCVIHIPDLHLQKEDDLSILKQCVDKFNVPSEHRFSLFTRIRYAHAFN 494
Query: 10025 SARTCRIYSRISLLSFIVLVQSSDAHDELTYFFTNEPEYINELIRLVRSEDSVPGSIRXX 9846
S RTCR+YSRISLL+FIVLVQSSDAHDELT FFTNEPEYINELIRLVRSE+ VPG IR
Sbjct: 495 SPRTCRLYSRISLLAFIVLVQSSDAHDELTSFFTNEPEYINELIRLVRSEEFVPGPIRAL 554
Query: 9845 XXXXXXXXXXXXXSSHERARXXXXXXXXXXXXNRMVLLSVLQKAISSLNSLNDTSSPLIV 9666
SSHERAR NRMVLLSVLQKAISSL+S NDTSSPLIV
Sbjct: 555 AMLALGAQLAAYASSHERARILSGSSIISAGGNRMVLLSVLQKAISSLSSPNDTSSPLIV 614
Query: 9665 DAXXXXXXXXXXXXXXXGTTVRGSGMVXXXXXXXRDNDPSHMHLVCLAVKTLQKLMEYSS 9486
DA GTTVRGSGMV +DNDPSHMHLVCLAVKTLQKLMEYSS
Sbjct: 615 DALLQFFLLHVLSSSSSGTTVRGSGMVPPLLPLLQDNDPSHMHLVCLAVKTLQKLMEYSS 674
Query: 9485 PAVSLFKDLGGVELLSQRLHVEVQRVIGTADGHNSMVT-DAVKSDDNHMYSQKRLIKALL 9309
PAVSLFKDLGGVELLSQRLHVEVQRVIG D HNSMVT DA+KS+++H+YSQKRLIKALL
Sbjct: 675 PAVSLFKDLGGVELLSQRLHVEVQRVIGV-DSHNSMVTSDALKSEEDHLYSQKRLIKALL 733
Query: 9308 KALGSATYSPGNPARSQSSQDNSLPVSLSLIFQNVDKFGGDIYFSAVTVMSEIIHKDPTC 9129
KALGSATYSP NPARSQSS DNSLP+SLSLIFQNVDKFGGDIYFSAVTVMSEIIHKDPTC
Sbjct: 734 KALGSATYSPANPARSQSSNDNSLPISLSLIFQNVDKFGGDIYFSAVTVMSEIIHKDPTC 793
Query: 9128 FITLKELGVPDAFISSVTAGVIPSCKALICVPNGLGAICLNNQGLEAVRETSALRFLVDT 8949
F +LKELG+PDAF+SSV+AGVIPSCKALICVPNGLGAICLNNQGLEAVRETSALRFLVDT
Sbjct: 794 FPSLKELGLPDAFLSSVSAGVIPSCKALICVPNGLGAICLNNQGLEAVRETSALRFLVDT 853
Query: 8948 FTSRKYLIPMNEGXXXXXXXXXXXXRHVQSLRSIGVDIIIEIINKLSSSQEYKNNE-TAT 8772
FTSRKYLIPMNEG RHVQSLRS GVDIIIEIINKLSS +E K+NE A+
Sbjct: 854 FTSRKYLIPMNEGVVLLANAVEELLRHVQSLRSTGVDIIIEIINKLSSPREDKSNEPAAS 913
Query: 8771 LQEKTDMETDVEGRDLVSAMDSSVDGSNDEQFSHLSIFHVMVLVHRTMENSETCRLFVEK 8592
E+T+METD EGRDLVSAMDSS DG+NDEQFSHLSIFHVMVLVHRTMENSETCRLFVEK
Sbjct: 914 SDERTEMETDAEGRDLVSAMDSSEDGTNDEQFSHLSIFHVMVLVHRTMENSETCRLFVEK 973
Query: 8591 GGXXXXXXXXXRPSITQSSGGMPIALHSTMVFKGFTQHHSTPLARAFCSSLKEHLKSALK 8412
GG RPSITQSSGGMPIALHSTMVFKGFTQHHSTPLARAFCSSLKEHLK+AL+
Sbjct: 974 GGLQALLTLLLRPSITQSSGGMPIALHSTMVFKGFTQHHSTPLARAFCSSLKEHLKNALQ 1033
Query: 8411 ELDKVSNSFDMTKIEKGAIPSXXXXXXXXXXAASKDNRWMNALLSEFGDASREVLEDVGQ 8232
ELD V++S ++ K+EKGAIPS AASKDNRWMNALLSEFGD+SR+VLED+G+
Sbjct: 1034 ELDTVASSGEVAKLEKGAIPSLFVVEFLLFLAASKDNRWMNALLSEFGDSSRDVLEDIGR 1093
Query: 8231 VHREVLWKISLFEKNKIVXXXXXXXXXXXXXXPDMSASDIGDSRYTSFRQYLDPILRRRG 8052
VHREVLW+ISLFE+ K+ D + D+ DSRYTSFRQYLDP+LRRRG
Sbjct: 1094 VHREVLWQISLFEEKKV--EPETSSPLANDSQQDAAVGDVDDSRYTSFRQYLDPLLRRRG 1151
Query: 8051 SGWNIESQVSDLINMYRDIGRAASDSQRVGSDRYSSLGLPXXXXXXXX-XXXXXXXXTRX 7875
SGWNIESQVSDLIN+YRDIGRAA DSQR Y S GLP T+
Sbjct: 1152 SGWNIESQVSDLINIYRDIGRAAGDSQR-----YPSAGLPSSSSQDQPPSSSDASASTKS 1206
Query: 7874 XXXXXXXXXXXCFDMMRSLSYHINHLFLELGKAMLFASRRENSPVNLSPAVISVANNIAS 7695
C DMMRSLSYHINHLF+ELGKAML SRRENSPVNLS +++SVA+NIAS
Sbjct: 1207 EEDKKRSEHSSCCDMMRSLSYHINHLFMELGKAMLLTSRRENSPVNLSASIVSVASNIAS 1266
Query: 7694 IVLEHLNFEGHSVSFERDMTVTTKCRYLGKVVEFVDGMLLDRPESCNSIMVNSFYCRGVI 7515
IVLEHLNFEGH++S ER+ TV+TKCRYLGKVVEF+DG+LLDRPESCN IM+NSFYCRGVI
Sbjct: 1267 IVLEHLNFEGHTISSERETTVSTKCRYLGKVVEFIDGILLDRPESCNPIMLNSFYCRGVI 1326
Query: 7514 QAILTTFQATSELLFTMSRPPSSPMETDSKTGKDGKEMDSSWIYGPLTSYGAIMDHLVTS 7335
QAILTTF+ATSELLF+M+R PSSPMETDSK+ K+ +E DSSWIYGPL+SYGAI+DHLVTS
Sbjct: 1327 QAILTTFEATSELLFSMNRLPSSPMETDSKSVKEDRETDSSWIYGPLSSYGAILDHLVTS 1386
Query: 7334 SFILSSSTRQLLEQPIFNGSVRFPQDAETFMKLLQSKVLKTVLPIWAHPQFPECNIELIS 7155
SFILSSSTRQLLEQPIF+G++RFPQDAE FMKLLQS+VLKTVLPIW HPQFPECN+ELIS
Sbjct: 1387 SFILSSSTRQLLEQPIFSGNIRFPQDAEKFMKLLQSRVLKTVLPIWTHPQFPECNVELIS 1446
Query: 7154 SVMSIMRHVCSGVEVKDTVGNGGARLAGPPPDESAISLIVEMGFSRARAEEALRQVGTNS 6975
SV SIMRHV SGVEVK+T N GARLAGPPPDE+AISLIVEMGFSRARAEEALRQVGTNS
Sbjct: 1447 SVTSIMRHVYSGVEVKNTAINTGARLAGPPPDENAISLIVEMGFSRARAEEALRQVGTNS 1506
Query: 6974 VEIATDWLFAHPEEPQEEDDELARALAMSLGNSVTPAQEGDSRSNDLELEEATVQPPPID 6795
VEIATDWLF+HPEEPQE DDELARALAMSLGNS T AQE D +SNDLELEE TVQ PPID
Sbjct: 1507 VEIATDWLFSHPEEPQE-DDELARALAMSLGNSDTSAQEEDGKSNDLELEEETVQLPPID 1565
Query: 6794 EMLRSCLQLLQRKEALAFSVRDMLVTISSQNDGQNRVKVLTYLIDNLKQCVVASEPSNDT 6615
E+L SCL+LLQ KE+LAF VRDML+T+SSQNDGQNRVKVLTYLID+LK C+++S+P T
Sbjct: 1566 EVLSSCLRLLQTKESLAFPVRDMLLTMSSQNDGQNRVKVLTYLIDHLKNCLMSSDPLKST 1625
Query: 6614 XXXXXXXXXXXXXHGDTAAREVASKAGLVKVALDLLCSWEVQIRESSMIEVPNWVISCFL 6435
HGDTAAREVASKAGLVKVAL+LLCSWE++ R+ + +VPNWV SCFL
Sbjct: 1626 ALSALFHVLALILHGDTAAREVASKAGLVKVALNLLCSWELEPRQGEISDVPNWVPSCFL 1685
Query: 6434 SVDQMLQLEPKLPDVTELHVLKRDNSNIKTSLVIDDSKRKDSESLPNVGLLDMEDQFQLL 6255
S+D+MLQL+PKLPDVTEL VLK+DNSN +TS+VIDDSK+KDSE+ + GLLD+EDQ QLL
Sbjct: 1686 SIDRMLQLDPKLPDVTELDVLKKDNSNTQTSVVIDDSKKKDSEASSSTGLLDLEDQKQLL 1745
Query: 6254 KICCKCIGKQLPSASMHAILQLSATLTKVHAAAICFLESGGLNALLSLPTSSLFSGFNNM 6075
KICCKCI KQLPSA+MHAILQL ATLTK+HAAAICFLESGGL+ALLSLPTSSLFSGFN++
Sbjct: 1746 KICCKCIQKQLPSATMHAILQLCATLTKLHAAAICFLESGGLHALLSLPTSSLFSGFNSV 1805
Query: 6074 ASTIIRHILEDPHTLQQAMELEIRHSLVTAANRHANPRVTPRNFIQNLAFVVYRDPVIFM 5895
ASTIIRHILEDPHTLQQAMELEIRHSLVTAANRHANPRVTPRNF+QNLAFVVYRDPVIFM
Sbjct: 1806 ASTIIRHILEDPHTLQQAMELEIRHSLVTAANRHANPRVTPRNFVQNLAFVVYRDPVIFM 1865
Query: 5894 KAAQSVCQIEMVGDRPYVVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDTAAGSP 5715
KAAQ+VCQIEMVGDRPYVVLL SGD A GSP
Sbjct: 1866 KAAQAVCQIEMVGDRPYVVLLKDREKEKNKEKEKDKPADKDKTSGAATKMTSGDMALGSP 1925
Query: 5714 ANSHGKQSDLNSRNVKSHRKPPQSFVTVIEHLLDLLMSFVPPPRPEDQVD-VSGTALSSD 5538
+S GKQ+DLN+RNVKS+RKPPQSFVTVIE+LLDL+MSF+PPPR ED+ D S TA S+D
Sbjct: 1926 ESSQGKQTDLNTRNVKSNRKPPQSFVTVIEYLLDLVMSFIPPPRAEDRPDGESSTASSTD 1985
Query: 5537 MDIDCSSAKGKGKAVSVPPEESKHAIQESTASLAKTAFFLKLLTDVLLTYASSIHVVLRH 5358
MDID SSAKGKGKAV+V PEESKHAIQE+TASLAK+AF LKLLTDVLLTYASSI VVLRH
Sbjct: 1986 MDID-SSAKGKGKAVAVTPEESKHAIQEATASLAKSAFVLKLLTDVLLTYASSIQVVLRH 2044
Query: 5357 DAELSNMHGPNRTSARLTSGGIFNHILQHFLPHATRQKKERKNDGDWMYKLATRANQFLV 5178
DA+LSN GPNR ++SGG+F+HILQHFLPH+T+QKKERK DGDW YKLATRANQFLV
Sbjct: 2045 DADLSNARGPNRIG--ISSGGVFSHILQHFLPHSTKQKKERKADGDWRYKLATRANQFLV 2102
Query: 5177 ASSIRSAEARKRIFSEICSIFLDFTDSSAGYNAPVPRMNVYVDLLNDILSARSPTGSSLS 4998
ASSIRSAE RKRIFSEICSIF+DFTDS AG P+ RMN YVDLLNDILSARSPTGSSLS
Sbjct: 2103 ASSIRSAEGRKRIFSEICSIFVDFTDSPAGCKPPILRMNAYVDLLNDILSARSPTGSSLS 2162
Query: 4997 AESAVIFVEAGLVHSLSTMLQVLDLDHPDSAKIVTAVVKALELVSKEHIHSAD-NAKGVN 4821
AESAV FVE GLV LS LQV+DLDHPDSAKIVTA+VKALE+V+KEH+HSAD NAKG N
Sbjct: 2163 AESAVTFVEVGLVQYLSKTLQVIDLDHPDSAKIVTAIVKALEVVTKEHVHSADLNAKGEN 2222
Query: 4820 SSKIAXXXXXXXXXXXRFQALDMTSQPTEMVTDHRETFNAVRTSQISDSVADEMDHDRDM 4641
SSK+ RFQALD T+QPTEMVTDHRE FNAV+TSQ SDSVADEMDHDRD+
Sbjct: 2223 SSKVVSDQSNLDPSSNRFQALD-TTQPTEMVTDHREAFNAVQTSQSSDSVADEMDHDRDL 2281
Query: 4640 DGGFARDGEDDFMHEMAEDGTGDGSTMEIRIEIPRNREDDMAPAADDTXXXXXXXXXXXX 4461
DGGFARDGEDDFMHE+AEDGT + STMEIR EIPRNREDDMA +D+
Sbjct: 2282 DGGFARDGEDDFMHEIAEDGTPNESTMEIRFEIPRNREDDMADDDEDSDEDMSADDGEEV 2341
Query: 4460 XXXXXXXXXXXXXX-----AHRMSHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GVIL 4299
AH+MSHP GVIL
Sbjct: 2342 DEDEDEDEDEENNNLEEDDAHQMSHPDTDQEDREMDEEEFDEDLLEEDDDEDEDEEGVIL 2401
Query: 4298 RLEEGINGINVLDHVEVFGGSNNLSGDTLRVMPLDIFGTRRQGRSTSIYNLLGRASDHGV 4119
RLEEGINGINV DH+EVFGGSNNLSGDTLRVMPLDIFGTRRQGRSTSIYNLLGRA DHGV
Sbjct: 2402 RLEEGINGINVFDHIEVFGGSNNLSGDTLRVMPLDIFGTRRQGRSTSIYNLLGRAGDHGV 2461
Query: 4118 LDHPLLEEPSSTTNFSDQ 4065
DHPLLEEPSS + Q
Sbjct: 2462 FDHPLLEEPSSVLHLPQQ 2479
Score = 1665 (591.2 bits), Expect = 0., Sum P(11) = 0., Group = 1
Identities = 326/371 (87%), Positives = 342/371 (92%), Frame = -1
Query: 1119 LSDSAYLLVGEVLKKIVALAPFFCCHFINELARSMQNLTLRAMKELHLYENSEKALLSSS 940
LSD+AYLLV EVLKKIVALAPFFCCHFINELA SMQNLTL AMKELHLYE+SEKALLS+S
Sbjct: 3194 LSDNAYLLVAEVLKKIVALAPFFCCHFINELAHSMQNLTLCAMKELHLYEDSEKALLSTS 3253
Query: 939 SANGTAVLRVVQALSSLVNTLQERKDPEQPAEKDHSDAVSQISEINTALDSLWLELSNCI 760
SANGTA+LRVVQALSSLV TLQE+KDP+ PAEKDHSDA+SQISEINTALD+LWLELSNCI
Sbjct: 3254 SANGTAILRVVQALSSLVTTLQEKKDPDHPAEKDHSDALSQISEINTALDALWLELSNCI 3313
Query: 759 SKIESSSEYXXXXXXXXXXXXMLTTGVAPPLPAGTQNLLPYIESFFVTCEKLRPGQPDAV 580
SKIESSSEY LTTGVAPPLPAGTQN+LPYIESFFVTCEKLRPGQPDA+
Sbjct: 3314 SKIESSSEYASNLSPASANAATLTTGVAPPLPAGTQNILPYIESFFVTCEKLRPGQPDAI 3373
Query: 579 QDASTSDMEDASTSSGGQRSSACQASLDEKQNAFVKFSEKHRRLLNAFIRQNSGLLEKSF 400
Q+ASTSDMEDASTSSGGQ+SS A+LDEK NAFVKFSEKHRRLLNAFIRQN GLLEKSF
Sbjct: 3374 QEASTSDMEDASTSSGGQKSSGSHANLDEKHNAFVKFSEKHRRLLNAFIRQNPGLLEKSF 3433
Query: 399 SLMLKIPRLIDFDNKRAYFRSKIKHQYDHHHHSPVRISVRRPYILEDSYNQLRMRSPQDL 220
SLMLKIPRLI+FDNKRAYFRSKIKHQ+DHHH SPVRISVRR YILEDSYNQLRMRSPQDL
Sbjct: 3434 SLMLKIPRLIEFDNKRAYFRSKIKHQHDHHH-SPVRISVRRAYILEDSYNQLRMRSPQDL 3492
Query: 219 KGRLTVQFQGEEGIDAGGLTREWYQSISRVIVDKSALLFTTVGNDLTFQPNPNSVYQTEH 40
KGRLTV FQGEEGIDAGGLTREWYQ +SRVI DK ALLFTTVGNDLTFQPNPNSVYQTEH
Sbjct: 3493 KGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNDLTFQPNPNSVYQTEH 3552
Query: 39 LSYFKFVGRVV 7
LSYFKFVGRVV
Sbjct: 3553 LSYFKFVGRVV 3563
Score = 1356 (482.4 bits), Expect = 0., Sum P(11) = 0., Group = 1
Identities = 284/370 (76%), Positives = 307/370 (82%), Frame = -1
Query: 3882 ENLVEMAFSDRNHESSSSRLDAIFRSLRSGRNGHRFNMWLDDGPQRNGSAAPAVPEGIEE 3703
ENLVEMAFSDRNH++SSSRLDAIFRSLRSGR+GHRFNMWLDD PQR GSAAPAVPEGIEE
Sbjct: 2483 ENLVEMAFSDRNHDNSSSRLDAIFRSLRSGRSGHRFNMWLDDSPQRTGSAAPAVPEGIEE 2542
Query: 3702 LLISHLRRPTP-QPDGQRTPVGGAQENDQPN----HGSDAEAREVAPAQQNENSESTLNP 3538
LL+S LRRPTP QPD Q TP GGA+ENDQ N H S+ EA AP +QNEN+++ + P
Sbjct: 2543 LLVSQLRRPTPEQPDEQSTPAGGAEENDQSNQQHLHQSETEAGGDAPTEQNENNDNAVTP 2602
Query: 3537 -----LDLSECAGPAPPDSDALQRDVSNASELATEMQYERSDAITRDVEAVSQASSGSGA 3373
LD SE A PAPP S+ALQR+VS ASE ATEMQYERSDA+ RDVEAVSQASSGSGA
Sbjct: 2603 AARSELDGSESADPAPP-SNALQREVSGASEHATEMQYERSDAVVRDVEAVSQASSGSGA 2661
Query: 3372 TLGESLRSLEVEIGSVEGHDDGDRHGTSGTSERLPLGDIQAAARSRRPSGNAVPVSSRDM 3193
TLGESLRSLEVEIGSVEGHDDGDRHG S +RLPLGD+QAA+RSRRP G+ V SSRD+
Sbjct: 2662 TLGESLRSLEVEIGSVEGHDDGDRHGAS---DRLPLGDLQAASRSRRPPGSVVLGSSRDI 2718
Query: 3192 SLESVSEVPQNPDQEPDQNASEGNQEPTRAAGADSIDPTFLEALPEDLRAEVLSSRQNQV 3013
SLESVSEVPQN +QE DQNA EG+QEP RAA DSIDPTFLEALPEDLRAEVLSSRQNQV
Sbjct: 2719 SLESVSEVPQNQNQESDQNADEGDQEPNRAADTDSIDPTFLEALPEDLRAEVLSSRQNQV 2778
Query: 3012 TQTSNDQPQDDGDIDPEFLAALPPDIREEVLAXXXXXXXXXXXXXXXXXPVEMDAVSIIA 2833
TQTSN+QPQ+DGDIDPEFLAALPPDIREEVLA PVEMDAVSIIA
Sbjct: 2779 TQTSNEQPQNDGDIDPEFLAALPPDIREEVLAQQRAQRLQQSQELEGQ-PVEMDAVSIIA 2837
Query: 2832 TFPSEIREEV 2803
TFPSEIREEV
Sbjct: 2838 TFPSEIREEV 2847
Score = 323 (118.8 bits), Expect = 0., Sum P(11) = 0., Group = 1
Identities = 61/72 (84%), Positives = 67/72 (93%), Frame = -2
Query: 2351 LQPLYKGQLQKLLVNLCTHRGSRQALVQILVDMLMLDLQGFSKKSIDAPEPPFRLYGCHA 2172
+QPLYKGQLQ+LL+NLC HR SR++LVQILVDMLMLDLQG SKKSIDA EPPFRLYGCHA
Sbjct: 2945 VQPLYKGQLQRLLLNLCAHRESRKSLVQILVDMLMLDLQGSSKKSIDATEPPFRLYGCHA 3004
Query: 2171 NIAYSRPQSSDG 2136
NI YSRPQS+DG
Sbjct: 3005 NITYSRPQSTDG 3016
Score = 314 (115.6 bits), Expect = 0., Sum P(11) = 0., Group = 1
Identities = 55/70 (78%), Positives = 64/70 (91%), Frame = -2
Query: 10865 WKQGNFHHWRPLFIHFDTYFKTYISSRKDLLLSDDMTEADPMPKNAILKILRVMQIILEN 10686
+ +GNFHHW+PLF+HFDTYFKT ISSRKDLLLSDDM E DP+PKN IL+ILRVMQI+LEN
Sbjct: 303 FNKGNFHHWKPLFMHFDTYFKTQISSRKDLLLSDDMAEGDPLPKNTILQILRVMQIVLEN 362
Query: 10685 CQNRSSFTGL 10656
CQN++SF GL
Sbjct: 363 CQNKTSFAGL 372
Score = 310 (114.2 bits), Expect = 0., Sum P(11) = 0., Group = 1
Identities = 64/93 (68%), Positives = 74/93 (79%), Frame = -1
Query: 1698 QLLNLLDVVMHNAENEIKQAKLEASSEKPSAPDNAVQDGKNNSDISVSYGSELNPEDGSK 1519
QLLNLL+VVM NAENEI QAKLEA+SEKPS P+NA QD + ++ + S GS+ N ED SK
Sbjct: 3101 QLLNLLEVVMLNAENEITQAKLEAASEKPSGPENATQDAQEGANAAGSSGSKSNAEDSSK 3160
Query: 1518 APAVDNRSNLQAVLRSLPQPELRLLCSLLAHDG 1420
P VD S+LQ VL+SLPQ ELRLLCSLLAHDG
Sbjct: 3161 LPPVDGESSLQKVLQSLPQAELRLLCSLLAHDG 3193
Score = 274 (101.5 bits), Expect = 0., Sum P(11) = 0., Group = 1
Identities = 55/87 (63%), Positives = 61/87 (70%), Frame = -2
Query: 2030 GLPPLVSRRVLETLTNLARSHPNVAKLLLFLEFPCPSRCFPEAHDHRHGKAVLLDDGEEQ 1851
G+PPLVSRRVLETLT LAR+HPNVAKLLLFLEFPCP C E D R GKAVL++ EQ
Sbjct: 3016 GVPPLVSRRVLETLTYLARNHPNVAKLLLFLEFPCPPTCHAETSDQRRGKAVLMEGDSEQ 3075
Query: 1850 KTFAXXXXXXXXXXXXYMRSVAHLEQV 1770
+A YMRSVAHLEQ+
Sbjct: 3076 NAYALVLLLTLLNQPLYMRSVAHLEQL 3102
Score = 231 (86.4 bits), Expect = 0., Sum P(11) = 0., Group = 1
Identities = 46/71 (64%), Positives = 50/71 (70%), Frame = -2
Query: 10571 CVNSLPFL-CQHLKLLLASSDPEIXXXXXXXXXXXXKINPSKLHMNGKLISCGPINTHLL 10395
C N F +H +LLLASSDPEI KINPSKLHMNGKLI+CG IN+HLL
Sbjct: 363 CQNKTSFAGLEHFRLLLASSDPEIVVAALETLAALVKINPSKLHMNGKLINCGAINSHLL 422
Query: 10394 SLAQGWGSKEE 10362
SLAQGWGSKEE
Sbjct: 423 SLAQGWGSKEE 433
Score = 217 (81.4 bits), Expect = 0., Sum P(11) = 0., Group = 1
Identities = 46/70 (65%), Positives = 50/70 (71%), Frame = -3
Query: 2665 NMLRERFAHRYHSSSLFGMXXXXXXXXXXXX-DIMAAGLDRNTGDPSRS-TSKPIETEGA 2492
NMLRERFAHRYHS SLFGM DI+ +GLDRN GD SR TSKPIETEG+
Sbjct: 2868 NMLRERFAHRYHSGSLFGMNSRGRRGESSRRGDIIGSGLDRNAGDSSRQPTSKPIETEGS 2927
Query: 2491 PLVDEDGLKA 2462
PLVD+D LKA
Sbjct: 2928 PLVDKDALKA 2937
Score = 159 (61.0 bits), Expect = 0., Sum P(11) = 0., Group = 1
Identities = 29/35 (82%), Positives = 32/35 (91%), Frame = -1
Query: 11037 PANIKAFIDRVVNIPLHDIAIPLSGFCWEFNKVNF 10933
PA +KAFIDRV++IPLHDIAIPLSGF WEFNK NF
Sbjct: 274 PAKVKAFIDRVISIPLHDIAIPLSGFRWEFNKGNF 308
Score = 125 (49.1 bits), Expect = 0., Sum P(11) = 0., Group = 1
Identities = 27/41 (65%), Positives = 30/41 (73%), Frame = -3
Query: 14599 GFRSEXXXXXXXXXXHRASFPLRLQQILAGSRAVSPAIKIE 14477
G RSE HRASFPLRLQQIL+GSRAVSP+IK+E
Sbjct: 231 GSRSEMAAAAAMAA-HRASFPLRLQQILSGSRAVSPSIKVE 270
Parameters:
B=1000000
V=1000000
W=5
S2=65
X=10
cpus=8
filter=seg
hspsepqmax=10000
hspmax=0
topcomboN=1
ctxfactor=5.77
E=10
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+3 0 BLOSUM62 0.318 0.134 0.401 0.350 0.152 0.535
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.134 0.401 0.346 0.150 0.530
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.134 0.401 0.345 0.148 0.496
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.134 0.401 0.351 0.155 0.580
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.134 0.401 0.337 0.145 0.465
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.134 0.401 0.358 0.157 0.604
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 4866 4532 8.3 48 5 n/a 10 0.0044 48
44 0.21 40
+2 0 4866 4399 8.0 48 5 n/a 10 0.0044 48
44 0.21 40
+1 0 4867 4373 8.0 48 5 n/a 10 0.0044 48
44 0.21 40
-1 0 4867 4371 8.0 48 5 n/a 10 0.0044 48
44 0.21 40
-2 0 4866 4254 9.9 47 5 n/a 10 0.0061 47
44 0.21 40
-3 0 4866 4240 9.9 47 5 n/a 10 0.0061 47
44 0.21 40
Statistics:
Database: UNIPROT_B9GCX0
Title: UNIPROT_B9GCX0
Posted: 3:30:56 PM CET Oct 29, 2009
Created: 3:30:56 PM CET Oct 29, 2009
Format: XDF-1
# of letters in database: 3829
# of sequences in database: 1
# of database sequences satisfying E: 1
No. of states in DFA: 32,067 (6765 KB)
Total size of DFA: 7905 KB (8709 KB)
Time to generate neighborhood: 0.03u 0.01s 0.04t Elapsed: 00:00:00
No. of threads or processors used: 1
Search cpu time: 0.00u 0.01s 0.01t Elapsed: 00:00:00
Total cpu time: 0.03u 0.03s 0.06t Elapsed: 00:00:00
Start: Fri Oct 30 09:12:00 2009 End: Fri Oct 30 09:12:00 2009
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