File: cysprot.water

package info (click to toggle)
bioperl 1.7.8-1
  • links: PTS, VCS
  • area: main
  • in suites: bookworm, sid, trixie
  • size: 35,788 kB
  • sloc: perl: 94,019; xml: 14,811; makefile: 20
file content (41 lines) | stat: -rw-r--r-- 2,177 bytes parent folder | download | duplicates (10)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
Local: PAPA_CARPA vs CATL_HUMAN
Score: 501.50

PAPA_CARPA      3        MIPSISKLLFVAICLFVYMGLSFGDFSIVGYSQNDLTSTERLIQL 47      
                         | |:   |:  | ||              | :   ||    |   
CATL_HUMAN      1        MNPT...LILAAFCL..............GIASATLTFDHSLEAQ 28      

PAPA_CARPA      48       FESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKK....NNS 88      
                         :  |   ||::|  ::|: :|  ::: |:| |:  |::     :|
CATL_HUMAN      29       WTKWKAMHNRLY.GMNEEGWRRAVWEKNMKMIELHNQEYREGKHS 72      

PAPA_CARPA      89       YWLGLNVFADMSNDEFKEKYTG.....SIAGNYTTTELSYEEVLN 128     
                         : : :| | ||:::||::   |        |      | ||    
CATL_HUMAN      73       FTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYE.... 113     

PAPA_CARPA      129      DGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKI 173     
                               |  ||||:|| |||||||| |||||||||   :|| :  
CATL_HUMAN      114      .....APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFR 153     

PAPA_CARPA      174      RTGNLNEYSEQELLDCD..RRSYGCNGGYPWSALQLVAQY.GIHY 215     
                         :|| |   ||| |:||   : : |||||    | | |    |:  
CATL_HUMAN      154      KTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDS 198     

PAPA_CARPA      216      RNTYPYEGVQRYCRSREKGPYAAKTD.GVRQVQPYNEGALLYSIA 259     
                           :||||  :  |:   |  |:   | |   : |  | ||: ::|
CATL_HUMAN      199      EESYPYEATEESCKYNPK..YSVANDTGFVDI.PKQEKALMKAVA 240     

PAPA_CARPA      260      N.QPVSVVLEAAGKDFQLYRGGIFVGP.CGNK.VDHAVAAVGYG. 300     
                            |:|| ::|  : |  |: ||:  | | :: :|| |  |||| 
CATL_HUMAN      241      TVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGF 285     

PAPA_CARPA      301      .......PNYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTS 338     
                                  | |:|||||  ||  ||::: :   |    ||: ::
CATL_HUMAN      286      ESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNH...CGIASA 327     

PAPA_CARPA      339      SFYP                                          342     
                         : ||
CATL_HUMAN      328      ASYP                                          331     

%id = 40.07			%similarity = 59.61
Overall %id = 35.65		Overall %similarity = 53.04