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BLASTN 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= human
(179 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
1,787,533 sequences; -24,016,349 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
gb|J00265.1|HUMINS01 Human insulin gene, complete cds 355 2e-95
emb|V00565.1|HSINSU Human gene for preproinsulin, from chromosom... 355 2e-95
gb|M10039.1|HUMINSPR Human alpha-type insulin gene and 5' flanki... 355 2e-95
gb|L15440.1|HUMINSTHIG Homo sapiens tyrosine hydroxylase (TH) ge... 355 2e-95
gb|AC132217.15| Homo sapiens chromosome 11, clone RP11-889I17, c... 347 4e-93
gb|AC130303.8| Homo sapiens chromosome 11, clone RP4-539G11, com... 347 4e-93
gb|AY138590.1|AY138589S2 Homo sapiens insulin (INS) gene, exons ... 347 4e-93
emb|AJ009655.1|HSA9655 Homo sapiens ins gene, partial 347 4e-93
gb|AY137497.1|AY137496S2 Pan troglodytes insulin precursor (INS)... 339 9e-91
emb|X61089.1|PTPPINS P.troglodytes gene for preproinsulin 315 1e-83
gb|AY137500.1|AY137498S3 Gorilla gorilla insulin precursor (INS)... 262 2e-67
gb|AY137503.1|AY137501S3 Pongo pygmaeus insulin precursor (INS) ... 222 1e-55
emb|X61092.1|CEPPINS C.aethiops gene for preproinsulin 129 2e-27
>gb|J00265.1|HUMINS01 Human insulin gene, complete cds
Length = 4044
Score = 355 bits (179), Expect = 2e-95
Identities = 179/179 (100%)
Strand = Plus / Plus
Query: 1 gtctgttccaagggcctttgcgtcaggtgggctcagggttccagggtggctggaccccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2228 gtctgttccaagggcctttgcgtcaggtgggctcagggttccagggtggctggaccccag 2287
Query: 61 gccccagctctgcagcagggaggacgtggctgggctcgtgaagcatgtgggggtgagccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2288 gccccagctctgcagcagggaggacgtggctgggctcgtgaagcatgtgggggtgagccc 2347
Query: 121 aggggccccaaggcagggcacctggccttcagcctgcctcagccctgcctgtctcccag 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2348 aggggccccaaggcagggcacctggccttcagcctgcctcagccctgcctgtctcccag 2406
>emb|V00565.1|HSINSU Human gene for preproinsulin, from chromosome 11. Includes a highly
polymorphic region upstream from the insulin gene
containing tandemly repeated sequences
Length = 4992
Score = 355 bits (179), Expect = 2e-95
Identities = 179/179 (100%)
Strand = Plus / Plus
Query: 1 gtctgttccaagggcctttgcgtcaggtgggctcagggttccagggtggctggaccccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2228 gtctgttccaagggcctttgcgtcaggtgggctcagggttccagggtggctggaccccag 2287
Query: 61 gccccagctctgcagcagggaggacgtggctgggctcgtgaagcatgtgggggtgagccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2288 gccccagctctgcagcagggaggacgtggctgggctcgtgaagcatgtgggggtgagccc 2347
Query: 121 aggggccccaaggcagggcacctggccttcagcctgcctcagccctgcctgtctcccag 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2348 aggggccccaaggcagggcacctggccttcagcctgcctcagccctgcctgtctcccag 2406
>gb|M10039.1|HUMINSPR Human alpha-type insulin gene and 5' flanking polymorphic region
Length = 3943
Score = 355 bits (179), Expect = 2e-95
Identities = 179/179 (100%)
Strand = Plus / Plus
Query: 1 gtctgttccaagggcctttgcgtcaggtgggctcagggttccagggtggctggaccccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2503 gtctgttccaagggcctttgcgtcaggtgggctcagggttccagggtggctggaccccag 2562
Query: 61 gccccagctctgcagcagggaggacgtggctgggctcgtgaagcatgtgggggtgagccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2563 gccccagctctgcagcagggaggacgtggctgggctcgtgaagcatgtgggggtgagccc 2622
Query: 121 aggggccccaaggcagggcacctggccttcagcctgcctcagccctgcctgtctcccag 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2623 aggggccccaaggcagggcacctggccttcagcctgcctcagccctgcctgtctcccag 2681
>gb|L15440.1|HUMINSTHIG Homo sapiens tyrosine hydroxylase (TH) gene, 3' end; insulin (INS)
gene, complete cds; insulin-like growth factor 2 (IGF2)
gene, 5' end
Length = 12565
Score = 355 bits (179), Expect = 2e-95
Identities = 179/179 (100%)
Strand = Plus / Plus
Query: 1 gtctgttccaagggcctttgcgtcaggtgggctcagggttccagggtggctggaccccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4289 gtctgttccaagggcctttgcgtcaggtgggctcagggttccagggtggctggaccccag 4348
Query: 61 gccccagctctgcagcagggaggacgtggctgggctcgtgaagcatgtgggggtgagccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4349 gccccagctctgcagcagggaggacgtggctgggctcgtgaagcatgtgggggtgagccc 4408
Query: 121 aggggccccaaggcagggcacctggccttcagcctgcctcagccctgcctgtctcccag 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4409 aggggccccaaggcagggcacctggccttcagcctgcctcagccctgcctgtctcccag 4467
>gb|AC132217.15| Homo sapiens chromosome 11, clone RP11-889I17, complete sequence
Length = 170027
Score = 347 bits (175), Expect = 4e-93
Identities = 178/179 (99%)
Strand = Plus / Plus
Query: 1 gtctgttccaagggcctttgcgtcaggtgggctcagggttccagggtggctggaccccag 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 86461 gtctgttccaagggcctttgcgtcaggtgggctcaggattccagggtggctggaccccag 86520
Query: 61 gccccagctctgcagcagggaggacgtggctgggctcgtgaagcatgtgggggtgagccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86521 gccccagctctgcagcagggaggacgtggctgggctcgtgaagcatgtgggggtgagccc 86580
Query: 121 aggggccccaaggcagggcacctggccttcagcctgcctcagccctgcctgtctcccag 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86581 aggggccccaaggcagggcacctggccttcagcctgcctcagccctgcctgtctcccag 86639
>gb|AC130303.8| Homo sapiens chromosome 11, clone RP4-539G11, complete sequence
Length = 171366
Score = 347 bits (175), Expect = 4e-93
Identities = 178/179 (99%)
Strand = Plus / Plus
Query: 1 gtctgttccaagggcctttgcgtcaggtgggctcagggttccagggtggctggaccccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127800 gtctgttccaagggcctttgcgtcaggtgggctcagggttccagggtggctggaccccag 127859
Query: 61 gccccagctctgcagcagggaggacgtggctgggctcgtgaagcatgtgggggtgagccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127860 gccccagctctgcagcagggaggacgtggctgggctcgtgaagcatgtgggggtgagccc 127919
Query: 121 aggggccccaaggcagggcacctggccttcagcctgcctcagccctgcctgtctcccag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 127920 aggggccccaaggcagggcacctggccttcagcctgcctcagccctgcctgtcacccag 127978
>gb|AY138590.1|AY138589S2 Homo sapiens insulin (INS) gene, exons 1, 2, 3, and complete cds;
and insulin-like growth factor (IGF2) gene, exon 1
Length = 4233
Score = 347 bits (175), Expect = 4e-93
Identities = 178/179 (99%)
Strand = Plus / Plus
Query: 1 gtctgttccaagggcctttgcgtcaggtgggctcagggttccagggtggctggaccccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gtctgttccaagggcctttgcgtcaggtgggctcagggttccagggtggctggaccccag 437
Query: 61 gccccagctctgcagcagggaggacgtggctgggctcgtgaagcatgtgggggtgagccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gccccagctctgcagcagggaggacgtggctgggctcgtgaagcatgtgggggtgagccc 497
Query: 121 aggggccccaaggcagggcacctggccttcagcctgcctcagccctgcctgtctcccag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 498 aggggccccaaggcagggcacctggccttcagcctgcctcagccctgcctgtcacccag 556
>emb|AJ009655.1|HSA9655 Homo sapiens ins gene, partial
Length = 1393
Score = 347 bits (175), Expect = 4e-93
Identities = 178/179 (99%)
Strand = Plus / Plus
Query: 1 gtctgttccaagggcctttgcgtcaggtgggctcagggttccagggtggctggaccccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 gtctgttccaagggcctttgcgtcaggtgggctcagggttccagggtggctggaccccag 65
Query: 61 gccccagctctgcagcagggaggacgtggctgggctcgtgaagcatgtgggggtgagccc 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 gccccagctgtgcagcagggaggacgtggctgggctcgtgaagcatgtgggggtgagccc 125
Query: 121 aggggccccaaggcagggcacctggccttcagcctgcctcagccctgcctgtctcccag 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 aggggccccaaggcagggcacctggccttcagcctgcctcagccctgcctgtctcccag 184
>gb|AY137497.1|AY137496S2 Pan troglodytes insulin precursor (INS) gene, complete cds
Length = 4124
Score = 339 bits (171), Expect = 9e-91
Identities = 177/179 (98%)
Strand = Plus / Plus
Query: 1 gtctgttccaagggcctttgcgtcaggtgggctcagggttccagggtggctggaccccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gtctgttccaagggcctttgcgtcaggtgggctcagggttccagggtggctggaccccag 397
Query: 61 gccccagctctgcagcagggaggacgtggctgggctcgtgaagcatgtgggggtgagccc 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 398 gccccagctctgcagcagggaggacgtggctgggctcttgaagcatgtgggggtgagccc 457
Query: 121 aggggccccaaggcagggcacctggccttcagcctgcctcagccctgcctgtctcccag 179
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 458 aggggccccaaggcagggcacctggccttcagccggcctcagccctgcctgtctcccag 516
>emb|X61089.1|PTPPINS P.troglodytes gene for preproinsulin
Length = 2483
Score = 315 bits (159), Expect = 1e-83
Identities = 175/179 (97%), Gaps = 1/179 (0%)
Strand = Plus / Plus
Query: 1 gtctgttccaagggcctttgcgtcaggtgggctcagggttccagggtggctggaccccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 gtctgttccaagggcctttgcgtcaggtgggctcagggttccagggtggctggaccccag 1087
Query: 61 gccccagctctgcagcagggaggacgtggctgggctcgtgaagcatgtgggggtgagccc 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1088 gccccagctctgcagcagggaggacgtggctgggctcttgaagcatgtgggggtgagccc 1147
Query: 121 aggggccccaaggcagggcacctggccttcagcctgcctcagccctgcctgtctcccag 179
|||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||
Sbjct: 1148 aggggccccaaggcagggcagct-gccttcagccggcctcagccctgcctgtctcccag 1205
>gb|AY137500.1|AY137498S3 Gorilla gorilla insulin precursor (INS) gene, complete cds
Length = 4146
Score = 262 bits (132), Expect = 2e-67
Identities = 141/144 (97%)
Strand = Plus / Plus
Query: 36 gggttccagggtggctggaccccaggccccagctctgcagcagggaggacgtggctgggc 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gggttccagggtggctggaccccaggccccagctctgcagcagggaggacgtggctgggc 448
Query: 96 tcgtgaagcatgtgggggtgagcccaggggccccaaggcagggcacctggccttcagcct 155
|| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 449 tcttgaagcatgtgggggtgagcccaggggccccaaggcagggcaactggccttcagccg 508
Query: 156 gcctcagccctgcctgtctcccag 179
||||||||||||||||||||||||
Sbjct: 509 gcctcagccctgcctgtctcccag 532
>gb|AY137503.1|AY137501S3 Pongo pygmaeus insulin precursor (INS) gene, complete cds
Length = 4126
Score = 222 bits (112), Expect = 1e-55
Identities = 136/144 (94%)
Strand = Plus / Plus
Query: 36 gggttccagggtggctggaccccaggccccagctctgcagcagggaggacgtggctgggc 95
||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 384 gggttccagggtggctggaccccaggctccagctctgcagctgggaggacgtggctgggc 443
Query: 96 tcgtgaagcatgtgggggtgagcccaggggccccaaggcagggcacctggccttcagcct 155
|| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 444 tcttgaagcatttgggggtgagcccaggggccccagggcagggcacctggccttcagccg 503
Query: 156 gcctcagccctgcctgtctcccag 179
||||||| |||||||||||||||
Sbjct: 504 acctcagctctgcctgtctcccag 527
>emb|X61092.1|CEPPINS C.aethiops gene for preproinsulin
Length = 1909
Score = 129 bits (65), Expect = 2e-27
Identities = 86/93 (92%)
Strand = Plus / Plus
Query: 36 gggttccagggtggctggaccccaggccccagctctgcagcagggaggacgtggctgggc 95
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 514 gggttccagggtggctggaccccaggccccagctctgcaacagggaggacatggctgggc 573
Query: 96 tcgtgaagcatgtgggggtgagcccaggggccc 128
|| |||||| | || |||||| |||||||||||
Sbjct: 574 tcttgaagcgtttgagggtgaacccaggggccc 606
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Jul 31, 2003 1:26 AM
Number of letters in database: 192,913,178
Number of sequences in database: 1,867,771
Lambda K H
1.37 0.711 0.00
Gapped
Lambda K H
1.37 0.711 7.29e-304
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,670,626
Number of Sequences: 1867771
Number of extensions: 1670626
Number of successful extensions: 118444
Number of sequences better than 1.0e-20: 13
Number of HSP's better than 0.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118410
Number of HSP's gapped (non-prelim): 33
length of query: 179
length of database: 8,782,847,770
effective HSP length: 20
effective length of query: 159
effective length of database: 8,745,492,350
effective search space: 1390533283650
effective search space used: 1390533283650
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 54 (107.5 bits)
Query= owlmonkey
(180 letters)
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
gb|J02989.1|ATRINS Owl monkey (A.trivirgatus) insulin gene, comp... 357 4e-96
>gb|J02989.1|ATRINS Owl monkey (A.trivirgatus) insulin gene, complete cds
Length = 2113
Score = 357 bits (180), Expect = 4e-96
Identities = 180/180 (100%)
Strand = Plus / Plus
Query: 1 gtctgttccaagggccttcgagccagtctgggccccagggctgccccactcggggttcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gtctgttccaagggccttcgagccagtctgggccccagggctgccccactcggggttcca 610
Query: 61 gagcagttggaccccaggtctcagcgggagggtgtggctgggctctgaagcatttgggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gagcagttggaccccaggtctcagcgggagggtgtggctgggctctgaagcatttgggtg 670
Query: 121 agcccaggggctcagggcagggcacctgccttcagcggcctcagcctgcctgtctcccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 agcccaggggctcagggcagggcacctgccttcagcggcctcagcctgcctgtctcccag 730
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Jul 31, 2003 1:26 AM
Number of letters in database: 192,913,178
Number of sequences in database: 1,867,771
Lambda K H
1.37 0.711 0.00
Gapped
Lambda K H
1.37 0.711 7.29e-304
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 910,717
Number of Sequences: 1867771
Number of extensions: 910717
Number of successful extensions: 72147
Number of sequences better than 1.0e-20: 1
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72146
Number of HSP's gapped (non-prelim): 1
length of query: 180
length of database: 8,782,847,770
effective HSP length: 20
effective length of query: 160
effective length of database: 8,745,492,350
effective search space: 1399278776000
effective search space used: 1399278776000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 54 (107.5 bits)
|
