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ID GCDH_CAEEL STANDARD; PRT; 409 AA.
AC Q20772;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 30-MAY-2006, entry version 44.
DE Probable glutaryl-CoA dehydrogenase, mitochondrial precursor
DE (EC 1.3.99.7) (GCD).
GN ORFNames=F54D5.7;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC Rhabditidae; Peloderinae; Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX MEDLINE=99069613; PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for
RT investigating biology.";
RL Science 282:2012-2018(1998).
CC -!- CATALYTIC ACTIVITY: Glutaryl-CoA + acceptor = crotonoyl-CoA +
CC CO(2) + reduced acceptor.
CC -!- COFACTOR: FAD (By similarity).
CC -!- PATHWAY: Degradative pathway of L-lysine, L-hydroxylysine, and L-
CC tryptophan metabolism.
CC -!- INTERACTION:
CC P39745:mpk-1; NbExp=1; IntAct=EBI-313068, EBI-321013;
CC Q17446:pmk-1; NbExp=1; IntAct=EBI-313068, EBI-312987;
CC -!- SUBCELLULAR LOCATION: Mitochondrion; mitochondrial matrix
CC (Potential).
CC -!- SIMILARITY: Belongs to the acyl-CoA dehydrogenase family.
CC -----------------------------------------------------------------------
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DR EMBL; Z66513; CAA91333.1; -; Genomic_DNA.
DR PIR; T22647; T22647.
DR UniGene; Cel.30446; -.
DR HSSP; Q06319; 1BUC.
DR IntAct; Q20772; -.
DR Ensembl; F54D5.7; Caenorhabditis elegans.
DR WormBase; WBGene00010052; F54D5.7.
DR WormPep; F54D5.7; CE03411.
DR GO; GO:0005515; F:protein binding; IPI.
DR InterPro; IPR006089; Acyl_CoA_DH.
DR InterPro; IPR006091; Acyl_CoA_DH/ox_M.
DR InterPro; IPR006090; Acyl_CoA_DH_1.
DR InterPro; IPR006092; Acyl_CoA_DH_N.
DR InterPro; IPR009075; AcylCo_DH/ox_C.
DR InterPro; IPR009100; AcylCoA_DH/ox_NM.
DR InterPro; IPR013764; AcylCoA_DH_1/2_C.
DR Pfam; PF00441; Acyl-CoA_dh_1; 1.
DR Pfam; PF02770; Acyl-CoA_dh_M; 1.
DR Pfam; PF02771; Acyl-CoA_dh_N; 1.
DR PROSITE; PS00072; ACYL_COA_DH_1; FALSE_NEG.
DR PROSITE; PS00073; ACYL_COA_DH_2; 1.
KW Complete proteome; FAD; Flavoprotein; Hypothetical protein;
KW Mitochondrion; Oxidoreductase; Transit peptide.
FT TRANSIT 1 ? Mitochondrion (Potential).
FT CHAIN ? 409 Probable glutaryl-CoA dehydrogenase.
FT /FTId=PRO_0000000530.
FT ACT_SITE 388 388 Proton acceptor (Potential).
SQ SEQUENCE 409 AA; 44964 MW; 4D06241FB6768069 CRC64;
MLTRGFTSIG KIASRGLSST FYQDAFQLSD QLTEDERSLM LSAREYCQER LLPRVTEAYR
TEKFDPSLIP EMGSMGLLGA PYQGYGCAGT STVGYGLIAR EVERVDSGYR STMSVQTSLV
IGPIYNYGSE DQKQKYIPDL ASGKKIGCFG LTEPNHGSNP GGMETKATWD ETTKTYKLNG
SKTWISNSPV SDVMVVWARS ARHNNKIKGF ILERGMKGLT TPKIEGKLSL RASITGQIAM
DDVPVPEENL LPNAEGLQGP FGCLNNARLG IAWGALGAAE ECFHLARQYT LDRQQFGRPL
AQNQLMQLKM ADMLTEISLG LQGCLRVSRL KDEGKVQSEQ ISIIKRNSCG KALEVARKAR
DMLGGNGIVD EYHIMRHMVN LETVNTYEGT HDVHALILGR AITGLNGFC
//
ID Q41V66_FERAC PRELIMINARY; PRT; 607 AA.
AC Q41V66;
DT 27-SEP-2005, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2005, sequence version 1.
DT 30-MAY-2006, entry version 5.
DE Glycoside hydrolase, family 15.
GN ORFNames=FaciDRAFT_1685;
OS Ferroplasma acidarmanus Fer1.
OC Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales;
OC Ferroplasmaceae; Ferroplasma.
OX NCBI_TaxID=333146;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Fer1;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter C., Glavina T.,
RA Hammon N., Israni S., Pitluck S., Richardson P.;
RT "Sequencing of the draft genome and assembly of Ferroplasma
RT acidarmanus fer1.";
RL Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Fer1;
RG US DOE Joint Genome Institute (JGI-ORNL);
RA Larimer F., Land M.;
RT "Annotation of the draft genome assembly of Ferroplasma acidarmanus
RT fer1.";
RL Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Fer1;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter C., Glavina T.,
RA Hammon N., Israni S., Pitluck S., Richardson P.;
RL Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an
CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC preliminary data.
CC -----------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution-NoDerivs License
CC -----------------------------------------------------------------------
DR EMBL; AABC04000001; EAM94575.1; -; Genomic_DNA.
DR GO; GO:0004339; F:glucan 1,4-alpha-glucosidase activity; IEA.
DR GO; GO:0016787; F:hydrolase activity; IEA.
DR GO; GO:0005976; P:polysaccharide metabolism; IEA.
DR InterPro; IPR008928; 6hp_glycosidase.
DR InterPro; IPR011613; Glyco_hydro_15_rel.
DR InterPro; IPR012343; Glyco_trans_sub.
DR Pfam; PF00723; Glyco_hydro_15; 1.
KW Hydrolase.
SQ SEQUENCE 607 AA; 69495 MW; 8AC6297BA16ED500 CRC64;
MGTYRGLYDL HDAYRSDYLK IANHGFIANN RTAALVGIDG TIDWACLPNF NSNPVFDSIL
DARNGGYFKT SPVMESNVNQ YYEESTNILI TEFVNNNQVI LRLTDFLPTS SYSTITFPEI
HRLIEAPYSD VEVSIDIKSH FNFGSGKTNI TRDRNGYIFS CTDDTLGIST NLKLKKGNGN
VYSRIKVEKG SHEWIVVLSG VRQIGNVRQY ESYTRLEETR NYWSAWAGKI NYSGLYYDHV
IRSALTLRGL FYDPTGMMVA APTTSLPEII GGERNWDYRY TWIRDTAYVV EALSLIGLND
VATKFLYDIM SIVQKDKKVK TIYPVNGDSK LEEKKVNLSG YMDSIPVRIG NEASEQLQID
QYGSIVNAVF RFHEAGGLVT TYLWDFLIEI LDTLKDIWKL PDSSIWEFRS EPKHYLYSKL
ISWSAFNRAI KMGRELGYSA PYRTWHKIRE EIKNEIMEKG YNPDVKAFTQ YYGSDQMDAS
VLRMPLTGII SAKDPRFVST LARVEAELKN PCGMFIRYHS DDGLKGHDNA FLLLSFWYVE
DLILSGRIME AKETFENILD HSNHLMLFSE EINFNDCREM LGNFPQAITH LGVIRAAIKL
DEALRGK
//
ID Q41US7_FERAC PRELIMINARY; PRT; 270 AA.
AC Q41US7;
DT 27-SEP-2005, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2005, sequence version 1.
DT 30-MAY-2006, entry version 4.
DE Potassium channel protein.
GN ORFNames=FaciDRAFT_1443;
OS Ferroplasma acidarmanus Fer1.
OC Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales;
OC Ferroplasmaceae; Ferroplasma.
OX NCBI_TaxID=333146;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Fer1;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter C., Glavina T.,
RA Hammon N., Israni S., Pitluck S., Richardson P.;
RT "Sequencing of the draft genome and assembly of Ferroplasma
RT acidarmanus fer1.";
RL Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Fer1;
RG US DOE Joint Genome Institute (JGI-ORNL);
RA Larimer F., Land M.;
RT "Annotation of the draft genome assembly of Ferroplasma acidarmanus
RT fer1.";
RL Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Fer1;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter C., Glavina T.,
RA Hammon N., Israni S., Pitluck S., Richardson P.;
RL Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an
CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC preliminary data.
CC -----------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution-NoDerivs License
CC -----------------------------------------------------------------------
DR EMBL; AABC04000002; EAM94333.1; -; Genomic_DNA.
DR GO; GO:0016020; C:membrane; IEA.
DR GO; GO:0005216; F:ion channel activity; IEA.
DR GO; GO:0005267; F:potassium channel activity; IEA.
DR GO; GO:0006813; P:potassium ion transport; IEA.
DR InterPro; IPR013099; Ion_trans_2_bac.
DR InterPro; IPR001622; K+channel_pore.
DR InterPro; IPR003148; TrkA_N.
DR Pfam; PF07885; Ion_trans_2; 1.
DR Pfam; PF02254; TrkA_N; 1.
KW Ionic channel.
SQ SEQUENCE 270 AA; 30497 MW; 528C4EA75C41DF75 CRC64;
MQTITTVGYG DTPVYGLAGR ANGMLIMVIG IGSLGYLMAG LTSMLIDIRL SSKLGERMAA
EKKHIVLCNY NESTKKVLDK IKYDGIDIVI LNENEVKGDN EYTYIKGSFL RENDLIRAGI
KKASSVIIFS RSEDKEQMAM DAESILSAMI IRKLNPEIRI IGEILNPDSR EHASSFMDDI
IIKGDVSSML IYSSIMIPGI PEFINDLLMS NSISEEDIDK KYASNTYREF ISNMEKENRI
VLAFRKQDKI YLRENSDKKI DVDSYIFIKN
//
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