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#NEXUS
Begin trees; [Treefile saved Thu Jun 24 10:15:07 2004]
[!
>Data file = /home/jes12/possel/urease/urease.cdna.nex
>Heuristic search settings:
> Optimality criterion = distance (minimum evolution)
> Negative branch lengths allowed, but set to zero for tree-score calculation
> Distance measure = uncorrected ("p")
> Starting tree(s) obtained via neighbor-joining
> Branch-swapping algorithm: tree-bisection-reconnection (TBR)
> Steepest descent option not in effect
> Initial 'MaxTrees' setting = 100
> Zero-length branches not collapsed
> 'MulTrees' option in effect
> Topological constraints not enforced
> Trees are unrooted
>
>Heuristic search completed
> Total number of rearrangements tried = 34
> Score of best tree(s) found = 1.13334
> Number of trees retained = 1
> Time used = <1 sec (CPU time = 0.00 sec)
]
Translate
1 Anidulans,
2 CneoA,
3 Cimmitis,
4 Mgrisea,
5 Ncrassa,
6 Spombe
;
tree PAUP_1 = [&U] (((1:0.188380,(4:0.147551,5:0.134318):0.027742):0.012293,3:0.175935):0.012799,2:0.212917,6:0.221404);
End;
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