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|
####### Makefile for "BioSig for C/C++" #####################
###
### $Id$
### Copyright (C) 2006,2007,2008,2009,2010,2011,2012 Alois Schloegl <alois.schloegl@ist.ac.at>
### This file is part of the "BioSig for C/C++" repository
### (biosig4c++) at http://biosig.sf.net/
###
##############################################################
##### Target: GNU/Linux
## make save2gdf - makes converter
## make mex4o - makes mexSLOAD, mexSOPEN for Octave (requires Octave-headers)
## make mex4m - makes mexSLOAD, mexSOPEN for Matlab (requires Matlab, mex -setup must be configured)
## make mexw32 - makes mexSLOAD.mexw32, mexSOPEN.mexw32 (requires that mingw32, gnumex libraries from Matlab/Win32)
## make mexw64 - makes mexSLOAD.mexw64, mexSOPEN.mexw64 (requires that mce-w32, gnumex libraries from Matlab/Win64)
## make mex - mex4o and mex4m combined
## make libbiosig - makes libbiosig
## make biosig4python - makes python interface (requires Python)
## make biosig4java - makes Java interface (experimental)
## make biosig4php - makes PHP interface (experimental)
## make biosig4perl - makes perl interface (experimental)
## make biosig4ruby - makes ruby interface (experimental)
## make biosig4tcl - makes tcl/tk interface (experimental)
## make win32 - makes save2gdf.exe, libbiosig.a, libbiosig.dll, for MSWindows, requires MinGW
## make win64 - makes save2gdf.exe, libbiosig.a, libbiosig.dll for 64bit Windows, requires mce-w64
## make sigviewer - makes sigviewer
##### Target: Win32
## make win32 - makes save2gdf.exe,libbiosig.lib,libbiosig.dll, for MSWindows, requires MinGW
## make mexw32 mex/mexSLOAD.mexw32 - requires MinGW32 and GNUMEX libraries from Matlab/Win32
## make win32/sigviewer.exe - requires sources of SigViewer, and MinGW32 (mex: make suitesparse zlib qt )
##### Target: Win64
## make win64 - makes save2gdf.exe,libbiosig.lib,libbiosig.dll, for MSWindows, requires MinGW
## make mexw64 mex/mexSLOAD.mexw64 - requires MCE-W64 and GNUMEX libraries from Matlab/Win64
## make win64/sigviewer.exe - requires sources of SigViewer and MCE-W64, make suitesparse zlib qt
###############################
# whether dynamic or static linking is used, can be controlled with
# LIBEXT. Setting it to 'a' links statically, 'so' links dynamically
#
LIBEXT = a
#LIBEXT = so
###############################
### User-specified options: its likely you want to change this
# settings for cross compiler: tested with MXE and mce-w64 with make suitesparse zlib qt ;
CROSS = $HOME/src/mxe/usr/bin/i686-pc-mingw32
## local MXE
ifeq "$(wildcard $(CROSS)-gcc)" ""
CROSS = $(shell pwd)/../mxe/usr/bin/i686-pc-mingw32
endif
ifeq "$(wildcard $(CROSS)-gcc)" ""
CROSS = /usr/local/src/mxe/usr/bin/i686-pc-mingw32
endif
CROSS64 = $(HOME)/src/mce-w64/usr/bin/x86_64-w64-mingw32
ifeq "$(wildcard $(CROSS64)-gcc)" ""
CROSS64 = $(shell pwd)/../mce-w64/usr/bin/i686-pc-mingw32
endif
ifeq "$(wildcard $(CROSS64)-gcc)" ""
CROSS64 = /usr/local/src/mce-w64/usr/bin/i686-pc-mingw32
endif
# settings for mex files
MEX_OPTION = -largeArrayDims # turn on for 64 bit Matlab, otherwise empty
# directory for sources of sigviewer
PathToSigViewer = ../sigviewer
PathToSigViewerWIN32 = ../sigviewer4win32
PathToSigViewerWIN64 = ../sigviewer4win64
## default options
CC = gcc
CXX = g++
#DEFINES = -D=WITHOUT_SCP_DECODE
DEFINES = -D=WITH_ZLIB
#DEFINES += -D=WITH_CURL
DEFINES += -D=__4HAERTEL__
DEFINES += -D=WITH_FAMOS
DEFINES += -D=WITH_CHOLMOD
DEFINES += -D=WITHOUT_NETWORK
#DEFINES += -D=WITH_HDF
#DEFINES += -D=WITH_MATIO
#DEFINES += -D=WITH_LIBXML2
#DEFINES += -D=WITH_FEF
#DEFINES += -D=WITH_PDP
#DEFINES += -D=WITH_DICOM
#DEFINES += -D=WITH_GDCM
#DEFINES += -D=WITH_GSL
#DEFINES += -D=WITH_EEPROBE
#DEFINES += -D=SOFTCODED_PHYSDIMTABLE # obsolete
#DEFINES += -D=CNT32 # for 32bit Neuroscan format
CFLAGS = -pipe -fPIC -Wall -fno-builtin-memcmp -O2 $(DEFINES) -Wextra # -I cntopenlib/include/
CXXFLAGS = -pipe -fPIC -Wall -fno-builtin-memcmp -O2 $(DEFINES) -Wextra # -I cntopenlib/include/
AR = ar crs
INCPATH = -I /usr/include/libxml2/
#INCPATH = -I /usr/local/include/gdcm-2.0/
# ../gdcm-2.0.10/Source/DataStructureAndEncodingDefinition \
# ../gdcm-2.0.10/Source/InformationObjectDefinition \
# ../gdcm-2.0.10/Source/MediaStorageAndFileFormat \
# ../gdcm-2.0.10/Source/DataDictionary \
# ../gdcm-2.0.10/Source/Common
LINK = $(CXX)
LFLAGS_dynamic = -L.
LIBS_dynamic = -lbiosig
LFLAGS_static =
LIBS_static = libbiosig.a
ifeq ($(LIBEXT),so)
LFLAGS = $(LFLAGS_dynamic)
LIBS = $(LIBS_dynamic)
else
LFLAGS = $(LFLAGS_static)
LIBS = $(LIBS_static)
endif
ifneq (,$(findstring WITH_ZLIB, $(DEFINES)))
LDLIBS += -lz
endif
ifneq (,$(findstring WITH_CHOLMOD, $(DEFINES)))
LDLIBS += -lcholmod
endif
ifneq (,$(findstring WITH_LIBXML2, $(DEFINES)))
LDLIBS += -lxml2
endif
ifneq (,$(findstring WITH_CURL, $(DEFINES)))
LDLIBS += -lcurl
endif
ifneq (,$(findstring WITH_HDF, $(DEFINES)))
LDLIBS += -lhdf5
endif
ifneq (,$(findstring WITH_MATIO, $(DEFINES)))
LDLIBS += -lmatio
endif
LIBS += $(LDLIBS)
DELETE = rm
COPY = cp -f
DATA_DIR = data/
TEMP_DIR = test/
##########################################################
## set Matlab and Octave variables
ifneq ($(shell which matlab), )
MATLABDIR := $(dir $(shell readlink -f $(shell which matlab) ) )
MEX = $(MATLABDIR)mex
MEX_EXT := $(shell $(MATLABDIR)mexext)
endif
# Octave - global install (e.g. from debian package)
OCTAVE_VERSION =
# Octave - local install (e.g. compiled from sources)
#OCTAVE_VERSION = -3.6.1
OCT := mkoctfile$(OCTAVE_VERSION)
##########################################################
##########################################################
## set variables for Python
SWIG := swig
PYTHON := python
PYTHONVER := $(shell $(PYTHON) -c "import sys; print sys.version[:3]")
PYTHON_INC := $(shell $(PYTHON) -c 'import numpy.distutils.system_info as si; print " -I".join(si.numpy_info().get_include_dirs())')
NUMPY_INC := $(shell $(PYTHON) -c 'import numpy.distutils.misc_util as mu; print " -I".join(mu.get_numpy_include_dirs())')
##########################################################
##########################################################
## set variables for MinGW Crosscompiler: compile on linux binaries for windows
##
PathToMinGW = $(dir $(CROSS))..$(nondir $(CROSS))
PathToMinGW64 = $(dir $(CROSS64))..$(nondir $(CROSS64))
MinGWCC = $(CROSS)-gcc
MinGWCXX = $(CROSS)-g++
MinGWDEF = $(DEFINES)
MinGWCFLAGS = -pipe -fPIC -D_REENTRANT -D=BUILD_DLL $(MinGWDEF) -Iwin32 -I$(PathToMinGW)/include/
MinGWLIBS = win32/libbiosig.a -L$(PathToMinGW)/lib/ -lws2_32 $(LDLIBS) # static
MinGWLINK = $(MinGWCXX)
MinGW64CC = $(CROSS64)-gcc
MinGW64CXX = $(CROSS64)-g++
MinGW64CFLAGS = -pipe -fPIC -O2 -D_REENTRANT -D=BUILD_DLL $(MinGWDEF) -Iwin32 -I$(PathToMinGW64)/include/
MinGW64LIBS = win64/libbiosig.a -L$(PathToMinGW64)/lib/ -lws2_32 $(LDLIBS) # static
MinGW64LINK = $(MinGW64CXX)
##########################################################
# Versioning
MAJOR_VERSION := $(word 3, $(shell grep '\#define BIOSIG_VERSION_MAJOR' biosig.h))
MINOR_VERSION := $(word 3, $(shell grep '\#define BIOSIG_VERSION_MINOR' biosig.h))
STEPPING := $(word 3, $(shell grep '\#define BIOSIG_PATCHLEVEL' biosig.h))
TODAY := $(shell date +%Y%m%d)
####### Output directory
OBJ = ./obj
BIN = $(DESTDIR)/usr/bin
LIB = $(DESTDIR)/usr/lib
####### Files
SOURCES = biosig.c \
t210/sopen_scp_read.c \
t210/sopen_famos_read.c \
t210/sopen_alpha_read.c \
t210/scp-decode.cpp \
t220/sopen_scp_write.c \
t220/crc4scp.c \
t230/sopen_hl7aecg.c \
t240/sopen_fef_read.c \
test0/sandbox.c \
xgethostname.c \
physicalunits.c \
biosig-network.c \
save2gdf.c \
biosig_client.c \
biosig_server.c
ifeq (,$(findstring WITH_LIBXML2, $(DEFINES)))
## TinyXML is used when built without libxml2
SOURCES += XMLParser/tinyxml.cpp \
XMLParser/tinyxmlparser.cpp \
XMLParser/tinyxmlerror.cpp \
XMLParser/tinystr.cpp
endif
OBJECTS = \
crc4scp.o \
biosig.o \
sopen_scp_read.o \
sopen_alpha_read.o \
sopen_scp_write.o \
sopen_hl7aecg.o \
biosig-network.o \
sandbox.o \
xgethostname.o
MinGWOBJECTS = \
win32/crc4scp.obj \
win32/biosig.obj \
win32/getlogin.obj \
win32/strndup.obj \
win32/strnlen.obj \
win32/sopen_scp_read.obj \
win32/sopen_alpha_read.obj \
win32/sopen_scp_write.obj \
win32/sopen_hl7aecg.obj \
win32/biosig-network.obj \
win32/sandbox.obj \
win32/xgethostname.obj
ifneq (,$(findstring WITH_FAMOS, $(DEFINES)))
OBJECTS += sopen_famos_read.o
endif
ifneq (,$(findstring WITH_FAMOS, $(MinGWDEF)))
MinGWOBJECTS += win32/sopen_famos_read.obj
endif
ifneq (,$(findstring WITH_FEF, $(DEFINES)))
OBJECTS += sopen_fef_read.o
endif
ifneq (,$(findstring WITH_FEF, $(MinGWDEF)))
MinGWOBJECTS += win32/sopen_fef_read.obj
endif
ifeq (,$(findstring WITHOUT_SCP_DECODE, $(DEFINES)))
OBJECTS += scp-decode.o
endif
ifeq (,$(findstring WITHOUT_SCP_DECODE, $(MinGWDEF)))
MinGWOBJECTS += win32/scp-decode.obj
endif
ifeq (,$(findstring WITH_LIBXML2, $(DEFINES)))
## TinyXML is used when built without libxml2
OBJECTS += tinyxml.o tinyxmlparser.o tinyxmlerror.o tinystr.o
endif
ifeq (,$(findstring WITH_LIBXML2, $(DEFINES)))
## TinyXML is used when built without libxml2
MinGWOBJECTS += win32/tinyxml.obj win32/tinyxmlparser.obj win32/tinyxmlerror.obj win32/tinystr.obj
endif
MinGW64OBJECTS = $(patsubst win32/%.obj, win64/%.obj, $(MinGWOBJECTS))
TARGET = save2gdf libbiosig.a
first: $(TARGET)
all: $(TARGET) mex4o biosig4python sigviewer win32 win64 win32/sigviewer.exe win64/sigviewer.exe #biosig_client biosig_server mma java tcl perl php ruby #sigviewer
lib: libbiosig.a win32/libbiosig.dll win32/libbiosig.a win64/libbiosig.a
#############################################################
# Compilation: Implicit, default rules
#############################################################
.SUFFIXES: .o .c .cpp .cc .cxx .C
.cpp.o:
$(CXX) -c $(CXXFLAGS) $(INCPATH) -o "$@" "$<"
.cc.o:
$(CXX) -c $(CXXFLAGS) $(INCPATH) -o "$@" "$<"
.cxx.o:
$(CXX) -c $(CXXFLAGS) $(INCPATH) -o "$@" "$<"
.C.o:
$(CC) -c $(CXXFLAGS) $(INCPATH) -o "$@" "$<"
.c.o:
$(CC) -c $(CXXFLAGS) $(INCPATH) -o "$@" "$<"
%.o: %.c biosig.h biosig-dev.h Makefile
$(CC) -c $(CFLAGS) $(INCPATH) -o "$@" "$<"
%.o: t210/%.c biosig.h biosig-dev.h
$(CC) -c $(CFLAGS) $(INCPATH) -o "$@" "$<"
%.o: t220/%.c biosig.h biosig-dev.h
$(CC) -c $(CFLAGS) $(INCPATH) -o "$@" "$<"
%.o: t230/%.c biosig.h biosig-dev.h
$(CC) -c $(CFLAGS) $(INCPATH) -o "$@" "$<"
%.o: t240/%.c biosig.h biosig-dev.h
$(CC) -c $(CFLAGS) -I t240 $(INCPATH) -o "$@" "$<"
%.o: test0/%.c biosig.h biosig-dev.h Makefile
$(CC) -c $(CFLAGS) $(INCPATH) -o "$@" "$<"
%.o: XMLParser/%.cpp
$(CXX) -c $(CXXFLAGS) $(INCPATH) -o "$@" "$<"
win32/%.obj: %.c biosig-dev.h biosig.h Makefile
$(MinGWCC) -c $(MinGWCFLAGS) $(INCPATH) -o "$@" "$<"
win32/%.obj: t210/%.c biosig-dev.h biosig.h
$(MinGWCC) -c $(MinGWCFLAGS) $(INCPATH) -o "$@" "$<"
win32/%.obj: t220/%.c biosig-dev.h biosig.h
$(MinGWCC) -c $(MinGWCFLAGS) $(INCPATH) -o "$@" "$<"
win32/%.obj: t230/%.c biosig-dev.h biosig.h
$(MinGWCC) -c $(MinGWCFLAGS) $(INCPATH) -o "$@" "$<"
win32/%.obj: t240/%.c biosig-dev.h biosig.h
$(MinGWCC) -c $(MinGWCFLAGS) -I t240 $(INCPATH) -o "$@" "$<"
win32/%.obj: test0/%.c biosig-dev.h biosig.h Makefile
$(MinGWCC) -c $(MinGWCFLAGS) -I t240 $(INCPATH) -o "$@" "$<"
win32/%.obj: win32/%.c
$(MinGWCC) -c $(MinGWCFLAGS) -I win32 $(INCPATH) -o "$@" "$<"
win32/%.obj: XMLParser/%.cpp
$(MinGWCXX) -c $(MinGWCFLAGS) $(INCPATH) -o "$@" "$<"
win64/%.obj: %.c biosig-dev.h biosig.h Makefile
$(MinGW64CC) -c $(MinGW64CFLAGS) $(INCPATH) -o "$@" "$<"
win64/%.obj: t210/%.c biosig-dev.h biosig.h
$(MinGW64CC) -c $(MinGW64CFLAGS) $(INCPATH) -o "$@" "$<"
win64/%.obj: t220/%.c biosig-dev.h biosig.h
$(MinGW64CC) -c $(MinGW64CFLAGS) $(INCPATH) -o "$@" "$<"
win64/%.obj: t230/%.c biosig-dev.h biosig.h
$(MinGW64CC) -c $(MinGW64CFLAGS) $(INCPATH) -o "$@" "$<"
win64/%.obj: t240/%.c biosig-dev.h biosig.h
$(MinGW64CC) -c $(MinGW64CFLAGS) -I t240 $(INCPATH) -o "$@" "$<"
win64/%.obj: test0/%.c biosig-dev.h biosig.h Makefile
$(MinGW64CC) -c $(MinGW64CFLAGS) -I t240 $(INCPATH) -o "$@" "$<"
win64/%.obj: win32/%.c
$(MinGW64CC) -c $(MinGW64CFLAGS) -I win32 $(INCPATH) -o "$@" "$<"
win64/%.obj: XMLParser/%.cpp
$(MinGW64CXX) -c $(MinGW64CFLAGS) $(INCPATH) -o "$@" "$<"
#############################################################
# eventcodes and units: conversion from ascii to C code
#############################################################
biosig.o win32/biosig.obj win64/biosig.obj: eventcodes.i eventcodegroups.i units.i biosig.c biosig.h biosig-dev.h Makefile
eventcodes.i eventcodegroups.i : extern/eventcodes.txt
gawk -f eventcodes.awk "$<"
units.i : extern/units.csv
gawk -f units.awk "$<" > "$@"
#############################################################
# Compilation: exceptions, explicit rules
#############################################################
sopen_fef_read.o: t240/sopen_fef_read.c biosig-dev.h biosig.h
# cd t240
# #asn1c -fcompound-names -pdu=SessionArchiveSection -S /home/schloegl/cvs/asn1c/skeletons fef.asn1
# asn1c -fcompound-names -pdu=SessionArchiveSection fef.asn1
# #asn1c -fcompound-names iso11073-10471.asn1
# #asn1c -fcompound-names iso11073-20601.asn1
# cd ..
# $(MAKE) -C t240 -f Makefile.am.sample
$(CC) -c $(CFLAGS) -I t240 $(INCPATH) -o "$@" "$<"
sopen_hl7aecg.o: t230/sopen_hl7aecg.c biosig-dev.h biosig.h
$(CXX) -c $(CFLAGS) $(INCPATH) -o "$@" "$<"
sopen_scp_read.o: t210/sopen_scp_read.c biosig-dev.h biosig.h biosig.h t210/structures.h
$(CC) -c $(CFLAGS) $(INCPATH) -o "$@" "$<"
scp-decode.o: t210/scp-decode.cpp biosig-dev.h biosig.h t210/structures.h t210/codes.h
$(CC) -c $(CFLAGS) $(INCPATH) -o "$@" "$<"
#getlogin_r.o: win32/getlogin_r.c
# $(CC) -c $(CFLAGS) $(INCPATH) -o "$@" "$<"
########### WIN32 ##################
win32/sopen_scp_read.obj: t210/sopen_scp_read.c biosig-dev.h biosig.h t210/structures.h
$(MinGWCC) -c $(MinGWCFLAGS) $(INCPATH) -o "$@" "$<"
win32/scp-decode.obj: t210/scp-decode.cpp biosig-dev.h biosig.h t210/structures.h t210/codes.h
$(MinGWCC) -c $(MinGWCFLAGS) $(INCPATH) -o "$@" "$<"
win32/sopen_hl7aecg.obj: t230/sopen_hl7aecg.c biosig-dev.h biosig.h
$(MinGWCXX) -c $(MinGWCFLAGS) $(INCPATH) -o "$@" "$<"
win32/getlogin_r.obj: win32/getlogin_r.c
$(MinGWCC) -c $(MinGWCFLAGS) $(INCPATH) -o "$@" "$<"
$(PathToSigViewerWIN32):
svn co https://sigviewer.svn.sourceforge.net/svnroot/sigviewer/trunk ../sigviewer4win32
$(PathToSigViewerWIN32)/src/src.pro: $(PathToSigViewerWIN32)
svn up ../sigviewer4win32
win32/sigviewer.exe: win32/libbiosig.a win32/libbiosig.dll $(PathToSigViewerWIN32)
#-$(COPY) ../biosig/doc/eventcodes.txt $(PathToSigViewerWIN32)/src/
-$(DELETE) $(PathToSigViewerWIN32)/extern/include/*.h
-$(COPY) biosig.h $(PathToSigViewerWIN32)/extern/include
-$(DELETE) $(PathToSigViewerWIN32)/extern/lib/lib*
-$(COPY) win32/libbiosig.a $(PathToSigViewerWIN32)/extern/lib
sed -i 's|\([[:space:]]*-lbiosig\)\([ #\\]*\)$$|\1 -lcholmod -lz -lcurl \2|' $(PathToSigViewerWIN32)/src/src.pro
-(cd $(PathToSigViewerWIN32)/src; $(CROSS)-qmake; make)
#-(cd $(PathToSigViewerWIN32); svn revert -R .; svn up -r 556; patch -p0 <../biosig4c++/patches/patch_sigviewer_0.5.1-as.4-DisplayHeaderInfo+EventTableAlways4Columns+SampleRateChanged2FLOAT64+libbiosigEventTable.diff; cd src; $(CROSS32)-qmake; $(MAKE);)
-$(COPY) $(PathToSigViewerWIN32)/bin/release/sigviewer.exe win32/sigviewer-$(shell cat $(PathToSigViewerWIN32)/src/version.txt)-win32.exe
########### WIN64 ##################
win64/sopen_scp_read.obj: t210/sopen_scp_read.c biosig-dev.h biosig.h t210/structures.h
$(MinGW64CC) -c $(MinGW64CFLAGS) $(INCPATH) -o "$@" "$<"
win64/scp-decode.obj: t210/scp-decode.cpp biosig-dev.h biosig.h t210/structures.h t210/codes.h
$(MinGW64CC) -c $(MinGW64CFLAGS) $(INCPATH) -o "$@" "$<"
win64/sopen_hl7aecg.obj: t230/sopen_hl7aecg.c biosig-dev.h biosig.h
$(MinGW64CXX) -c $(MinGW64CFLAGS) $(INCPATH) -o "$@" "$<"
win64/getlogin_r.obj: win32/getlogin_r.c
$(MinGW64CC) -c $(MinGW64CFLAGS) $(INCPATH) -o "$@" "$<"
$(PathToSigViewerWIN64):
svn co https://sigviewer.svn.sourceforge.net/svnroot/sigviewer/trunk ../sigviewer4win64
$(PathToSigViewerWIN64)/src/src.pro: $(PathToSigViewerWIN64)
svn up ../sigviewer4win64
win64/sigviewer.exe: win64/libbiosig.a win64/libbiosig.dll
#-$(COPY) ../biosig/doc/eventcodes.txt $(PathToSigViewerWIN64)/src/
-$(DELETE) $(PathToSigViewerWIN64)/extern/include/*.h
-$(COPY) biosig.h $(PathToSigViewerWIN64)/extern/include
-$(DELETE) $(PathToSigViewerWIN64)/extern/lib/lib*
-$(COPY) win64/libbiosig.a $(PathToSigViewerWIN64)/extern/lib
sed -i 's|\([[:space:]]*-lbiosig\)\([ #\\]*\)$$|\1 -lcholmod -lz -lcurl\2|' $(PathToSigViewerWIN64)/src/src.pro
-(cd $(PathToSigViewerWIN64)/src; $(CROSS64)-qmake; make)
#-(cd $(PathToSigViewerWIN64); svn revert -R .; svn up -r 556; patch -p0 <../biosig4c++/patches/patch_sigviewer_0.5.1-as.4-DisplayHeaderInfo+EventTableAlways4Columns+SampleRateChanged2FLOAT64+libbiosigEventTable.diff; cd src; $(CROSS64)-qmake; $(MAKE);)
-$(COPY) $(PathToSigViewerWIN64)/bin/release/sigviewer.exe win64/sigviewer-$(shell cat $(PathToSigViewerWIN64)/src/version.txt)-win64.exe
#############################################################
# other language bindings (on Linux)
#############################################################
biosig4python : python/_biosig.so python/biosig.py
python/biosig.py python/swig_wrap.cxx: python/swig.i
$(SWIG) -c++ -python -I/usr/include -I$(NUMPY_INC) -o python/swig_wrap.cxx python/swig.i
python/_biosig.so : python/swig_wrap.cxx libbiosig.$(LIBEXT)
$(CXX) -c $(CXXFLAGS) -I$(PYTHON_INC) -I$(NUMPY_INC) -I$(INCPATH) python/swig_wrap.cxx -o python/swig_wrap.o
$(CXX) -shared python/swig_wrap.o $(LFLAGS) $(LIBS) -lpython$(PYTHONVER) -o python/_biosig.so
java: libbiosig.$(LIBEXT) java/biosig.i
$(MAKE) -C java
perl: libbiosig.$(LIBEXT) perl/biosig.i
$(MAKE) -C perl
php: libbiosig.$(LIBEXT) php/biosig.i
$(MAKE) -C php
python: libbiosig.$(LIBEXT) python/swig.i
$(MAKE) -C python
ruby: libbiosig.$(LIBEXT) ruby/biosig.i
$(MAKE) -C ruby
tcl: libbiosig.$(LIBEXT) tcl/biosig.i
$(MAKE) -C tcl
#############################################################
# WIN32 - BUILD
#############################################################
win32/libbiosig.lib: win32/libbiosig.a
$(COPY) "$<" "$@"
win32/libbiosig.a: $(MinGWOBJECTS) win32/libcnsfef.a biosig.h biosig-dev.h
-$(DELETE) "$@"
$(CROSS)-$(AR) "$@" $(MinGWOBJECTS) t240/*.obj
-touch ../sigviewer4win32/src/file_context.cpp # trigger to rebuild sigviewer
win32/libcnsfef.a:
$(MAKE) CROSS=$(CROSS) -C t240 ../win32/libcnsfef.a
win32/libbiosig.dll: $(MinGWOBJECTS) biosig.h biosig-dev.h
$(MinGWLINK) -shared -fPIC $(MinGWOBJECTS) $(MinGWLIBS) -o "$@" -Wl,--output-def,win32/libbiosig.def,--out-implib,win32/libbiosig.dll.a
-$(COPY) "$@" $(PathToSigViewerWIN32)/extern/lib/
win32/save2gdf.exe: save2gdf.c win32/libbiosig.a
$(MinGWLINK) $(MinGWCFLAGS) "$<" $(MinGWLIBS) -o "$@"
win32/pdp2gdf.exe: pdp2gdf.c win32/libbiosig.a
$(MinGWLINK) $(MinGWCFLAGS) "$<" $(MinGWLIBS) -o "$@"
win32 exe: win32/save2gdf.exe win32/libbiosig.dll win32/libbiosig.a #mexw32 win32mma
#############################################################
# WIN64 - BUILD
#############################################################
win64/libbiosig.lib: win64/libbiosig.a
$(COPY) "$<" "$@"
win64/libbiosig.a: $(MinGW64OBJECTS) win64/libcnsfef.a biosig.h biosig-dev.h
-$(DELETE) "$@"
$(CROSS64)-$(AR) "$@" $(MinGW64OBJECTS) t240/*.o64
-touch ../sigviewer4win64/src/file_context.cpp # trigger to rebuild sigviewer
win64/libcnsfef.a:
$(MAKE) CROSS64=$(CROSS64) -C t240 ../win64/libcnsfef.a
win64/libbiosig.dll: $(MinGW64OBJECTS) biosig.h biosig-dev.h
$(MinGW64LINK) -shared -fPIC $(MinGW64OBJECTS) $(MinGW64LIBS) -o "$@" -Wl,--output-def,win32/libbiosig.def,--out-implib,win32/libbiosig.dll.a
-$(COPY) "$@" $(PathToSigViewerWIN64)/extern/lib/
win64/save2gdf.exe: save2gdf.c win64/libbiosig.a
$(MinGW64LINK) $(MinGW64CFLAGS) "$<" $(MinGW64LIBS) -o "$@"
win64/pdp2gdf.exe: pdp2gdf.c win64/libbiosig.a
$(MinGW64LINK) $(MinGW64CFLAGS) "$<" $(MinGW64LIBS) -o "$@"
win64: win64/save2gdf.exe win64/libbiosig.dll win64/libbiosig.a #mexw64 win64mma
#############################################################
# GNU/Linux - BUILD
#############################################################
t240/libcnsfef.a:
# $(MAKE) -C t240 regen #
$(MAKE) -C t240 libcnsfef.a # generate t240/*.o files
libbiosig.a: $(OBJECTS) t240/libcnsfef.a biosig.h biosig-dev.h
-$(DELETE) libbiosig.a
$(AR) libbiosig.a $(OBJECTS) t240/*.o
-touch ../sigviewer/src/file_context.cpp # trigger to rebuild sigviewer
libbiosig.so: $(OBJECTS) t240/libcnsfef.a biosig.h biosig-dev.h
$(CXX) -shared -fPIC -Wl,-soname,libbiosig.so.${MAJOR_VERSION} $(LDLIBS) \
-o libbiosig.so.${MAJOR_VERSION}.${MINOR_VERSION}.${STEPPING} $(OBJECTS) t240/*.o
ln -sf libbiosig.so.${MAJOR_VERSION}.${MINOR_VERSION}.${STEPPING} libbiosig.so.${MAJOR_VERSION}
ln -sf libbiosig.so.${MAJOR_VERSION} libbiosig.so
save2gdf: save2gdf.o libbiosig.$(LIBEXT) Makefile
$(LINK) $(CXXFLAGS) save2gdf.o $(LFLAGS) $(LIBS) -o save2gdf
pdp2gdf: pdp2gdf.o libbiosig.$(LIBEXT)
$(LINK) $(CXXFLAGS) pdp2gdf.o $(LFLAGS) $(LIBS) -o pdp2gdf
physicalunits: physicalunits.o libbiosig.$(LIBEXT)
$(LINK) $(CXXFLAGS) physicalunits.o $(LFLAGS) $(LIBS) -o physicalunits
bscs: biosig_client biosig_server sandbox.o biosig.o
biosig_client: biosig_client.c libbiosig.$(LIBEXT) biosig-network.o Makefile
$(LINK) $(CXXFLAGS) biosig_client.c biosig-network.o $(LFLAGS) $(LIBS) -o biosig_client
biosig_server: biosig_server.c libbiosig.$(LIBEXT) biosig-network.o Makefile
$(LINK) $(CXXFLAGS) biosig_server.c biosig-network.o $(LFLAGS) $(LIBS) -o biosig_server
#############################################################
# MathLink interface to Mathematica
#############################################################
mma: libbiosig.$(LIBEXT)
$(MAKE) -C mma CROSS=$(CROSS) CROSS64=$(CROSS64) LDLIBS="$(LDLIBS)" sload
win32mma: win32/libbiosig.a
$(MAKE) -C mma CROSS=$(CROSS) CROSS64=$(CROSS64) LDLIBS="$(LDLIBS)" sload.exe
win64mma: win64/libbiosig.a
$(MAKE) -C mma CROSS=$(CROSS) CROSS64=$(CROSS64) LDLIBS="$(LDLIBS)" sload.w64.exe
#############################################################
# MEX-files for Octave and Matlab
#############################################################
mex mex4m mex4o oct: libbiosig.a
$(MAKE) -C mex DEFINES="$(DEFINES)" CROSS=$(CROSS) CROSS64=$(CROSS64) LDLIBS="$(LDLIBS)" OCTAVE_VERSION=$(OCTAVE_VERSION) $@
#-cp mex/*.mex* ../biosig/t200_FileAccess/
mexw32: win32/libbiosig.a
$(MAKE) -C mex DEFINES="$(DEFINES)" CROSS=$(CROSS) CROSS64=$(CROSS64) LDLIBS="$(LDLIBS)" $(@F)
-cp mex/*.mexw32 ../biosig/t200_FileAccess/
mexw64: win64/libbiosig.a
$(MAKE) -C mex DEFINES="$(DEFINES)" CROSS=$(CROSS) CROSS64=$(CROSS64) LDLIBS="$(LDLIBS)" $(@F)
-cp mex/*.mexw64 ../biosig/t200_FileAccess/
#############################################################
# SigViewer
#############################################################
sigviewer: $(PathToSigViewer)/bin/sigviewer
$(COPY) $(PathToSigViewer)/bin/release/sigviewer bin/sigviewer-$(TODAY)
$(COPY) $(PathToSigViewer)/bin/release/sigviewer bin/sigviewer-$(shell cat $(PathToSigViewer)/src/version.txt)
ln -sf sigviewer-$(TODAY) bin/sigviewer
$(PathToSigViewer)/bin/sigviewer: libbiosig.$(LIBEXT) biosig.h
-$(DELETE) $(PathToSigViewer)/extern/include/*
-$(COPY) biosig.h $(PathToSigViewer)/extern/include
-$(DELETE) $(PathToSigViewer)/extern/lib/lib*
-$(COPY) libbiosig.a $(PathToSigViewer)/extern/lib
sed -i 's|\([[:space:]]*-lbiosig\)\([ #\\]*\)$$|\1 $(LDLIBS) \2|' $(PathToSigViewer)/src/src.pro
(cd $(PathToSigViewer)/src; qmake; $(MAKE);)
#(cd $(PathToSigViewer); svn revert -R .; svn up -r 556; patch -p0 <../biosig4c++/patches/patch_sigviewer_0.5.1-as.4-DisplayHeaderInfo+EventTableAlways4Columns+SampleRateChanged2FLOAT64+libbiosigEventTable.diff; cd src; qmake; $(MAKE);)
docs: docs/save2gdf.txt docs/mexSLOAD.txt
asciidoc -d manpage docs/save2gdf.txt
asciidoc -d manpage docs/mexSLOAD.txt
# for backward compatibility
save2scp: save2gdf
save2aecg: save2gdf
#############################################################
# TTL2TRIG, FLOWMON
#############################################################
### TTL2TRIG
ifeq (1,0)
### for debugging
bin/ttl2trig : src/ttl2trig.c libbiosig.a
$(CXX) $(INCPATH) $(DEFINES) -D=WITH_BIOSIG "$<" -Wall -Wextra -lasound $(LIBS) -o "$@"
else
bin/ttl2trig : src/ttl2trig.c
$(CXX) $(INCPATH) $(DEFINES) "$<" -Wall -Wextra -lasound -o "$@"
endif
### FLOWMON
bin/flowmon : src/flowmon.c
$(CXX) $(INCPATH) $(DEFINES) "$<" -I. -Wall -Wextra $(LIBS) -o "$@"
#############################################################
# INSTALL and DE-INSTALL
#############################################################
.PHONY: clean distclean install remove install_sigviewer install_octave asc bin testscp testhl7 testbin test test6 zip
distclean:
-$(DELETE) *.a
-$(DELETE) *.i
-$(DELETE) *.o
-$(DELETE) *.lib
-$(DELETE) *.so
-$(DELETE) *.so.*
-$(DELETE) *.mex*
-$(DELETE) *.oct
-$(DELETE) t5.scp t6.scp save2gdf gztest test_scp_decode biosig_server biosig_client
-$(DELETE) t?.[bge]df* t?.hl7* t?.scp* t?.cfw* t?.gd1* t?.*.gz *.fil $(TEMP_DIR)/t1.* $(DATA_DIR)/t1.*
-$(DELETE) python/swig_wrap.* python/biosig.py* python/_biosig.so
-$(DELETE) QMakefile
-$(DELETE) igor/libIgor.a
-$(DELETE) win32/*.a win32/*.lib win32/libbiosig.* win32/*.obj win32/*.exe
-$(DELETE) win64/*.a win64/*.lib win64/libbiosig.* win64/*.obj win64/*.exe
-$(DELETE) -rf win32/zlib
-$(MAKE) -C java clean
-$(MAKE) -C matlab clean
-$(MAKE) -C mma clean
-$(MAKE) -C php clean
-$(MAKE) -C perl clean
-$(MAKE) -C ruby clean
-$(MAKE) -C tcl clean
-$(MAKE) -C mex clean
clean:
-$(DELETE) *~
-$(DELETE) *.a
-$(DELETE) *.i
-$(DELETE) *.o
-$(DELETE) *.so
-$(DELETE) *.so.*
-$(DELETE) *.mex*
-$(DELETE) *.oct
-$(DELETE) $(TEMP_DIR)/t1.*
-$(DELETE) python/biosig.py* _biosig.so
-$(DELETE) python/swig_wrap.*
-$(DELETE) win32/*.exe win32/*.o* win32/*.lib win32/*.a
-$(DELETE) win64/*.exe win64/*.o* win64/*.lib win64/*.a
-$(DELETE) t240/*.o*
-$(DELETE) t240/libcnsfef.a
-$(DELETE) t240/libbiosig.*
-$(DELETE) pdp2gdf
-$(MAKE) -C java clean
-$(MAKE) -C matlab clean
-$(MAKE) -C mma clean
-$(MAKE) -C php clean
-$(MAKE) -C perl clean
-$(MAKE) -C ruby clean
-$(MAKE) -C tcl clean
-$(MAKE) -C mex clean
install_sigviewer: sigviewer
install $(PathToSigViewer)/bin/release/sigviewer $(BIN)
install_ttl2trig: bin/ttl2trig
install bin/ttl2trig $(BIN)
install_octave: mexSLOAD.mex
mkdir -p $(DESTDIR)/usr/share/octave/site-m/
install mex/mexSLOAD.mex* $(DESTDIR)/usr/share/octave/site-m/
install mex/mexSOPEN.mex* $(DESTDIR)/usr/share/octave/site-m/
install_libbiosig: libbiosig.a libbiosig.so
install biosig.h $(DESTDIR)/usr/include
install libbiosig.so.${MAJOR_VERSION}.${MINOR_VERSION}.${STEPPING} $(LIB)
ln -sf libbiosig.so.${MAJOR_VERSION}.${MINOR_VERSION}.${STEPPING} $(LIB)/libbiosig.so.${MAJOR_VERSION}
ln -sf libbiosig.so.${MAJOR_VERSION} $(LIB)/libbiosig.so
install libbiosig.a $(LIB)
install: save2gdf libbiosig.a libbiosig.so doc/save2gdf.1
install -d $(BIN)
install save2gdf $(BIN)
install heka2itx $(BIN)
install save2aecg $(BIN)
install save2scp $(BIN)
-install bin/tt2trig $(BIN)
#install rec2bin $(BIN)
#install bin2rec $(BIN)
install -d $(LIB) $(DESTDIR)/usr/include
install biosig.h $(DESTDIR)/usr/include
install libbiosig.so.${MAJOR_VERSION}.${MINOR_VERSION}.${STEPPING} $(LIB)
ln -sf libbiosig.so.${MAJOR_VERSION}.${MINOR_VERSION}.${STEPPING} $(LIB)/libbiosig.so.${MAJOR_VERSION}
ln -sf libbiosig.so.${MAJOR_VERSION} $(LIB)/libbiosig.so
install libbiosig.a $(LIB)
mkdir -p $(DESTDIR)/usr/share/man/man1
install doc/*.1 $(DESTDIR)/usr/share/man/man1
#install libbiosig.man $(DESTDIR)/usr/share/
#$(MAKE) install_sigviewer
#$(MAKE) install_octave
uninstall remove:
-rm $(BIN)/save2gdf
-rm $(BIN)/heka2itx
-rm $(BIN)/save2scp
-rm $(BIN)/save2aecg
-rm $(BIN)/ttl2trig
#-rm $(BIN)/rec2bin
#-rm $(BIN)/bin2rec
-rm $(BIN)/sigviewer
-rm $(BIN)/eventcodes.txt
-rm $(DESTDIR)/usr/include/biosig.h
-rm $(LIB)/libbiosig.*
-rm $(DESTDIR)/usr/share/man/man1/save2gdf.1
-rm $(DESTDIR)/usr/share/man/man1/mexSLOAD.1
-rm $(DESTDIR)/usr/share/man/man1/sigviewer.1
#-rm $(DESTDIR)/usr/share/man/man1/rec2bin.1
#-rm $(DESTDIR)/usr/share/man/man1/bin2rec.1
#############################################################
# Testing
#############################################################
# ./save2gdf -V8 ~/data/test/tms32/small_test.float32.log
./save2gdf -f=TMSi t0.scp $(TEMP_DIR)t2.log
cat $(TEMP_DIR)t2.log
$(TEMP_DIR)scp/redred/PFE103.scp:
# scp example data sets
wget -q -P$(TEMP_DIR) http://www.openecg.net/ECGsamples.zip
wget -q -P$(TEMP_DIR) http://www.openecg.net/ECGsamplesc.zip
unzip -u $(TEMP_DIR)ECGsamples.zip "scp*.zip" -d $(TEMP_DIR)
unzip -u $(TEMP_DIR)ECGsamplesc.zip "scp*.zip" -d $(TEMP_DIR)
mkdir -p $(TEMP_DIR)scp/high
mkdir -p $(TEMP_DIR)scp/highc
mkdir -p $(TEMP_DIR)scp/redred
mkdir -p $(TEMP_DIR)scp/redredc
unzip -u $(TEMP_DIR)scp_high.zip -d $(TEMP_DIR)scp/high
unzip -u $(TEMP_DIR)scp_highc.zip -d $(TEMP_DIR)scp/highc
unzip -u $(TEMP_DIR)scp_redred.zip -d $(TEMP_DIR)scp/redred
unzip -u $(TEMP_DIR)scp_redredc.zip -d $(TEMP_DIR)scp/redredc
rm -rf $(TEMP_DIR)ECGsamples*.zip
rm -rf $(TEMP_DIR)scp*.zip
$(DATA_DIR)t1.scp: $(TEMP_DIR)scp/redred/PFE103.scp
$(COPY) $(TEMP_DIR)scp/redred/PFE103.scp $(DATA_DIR)t1.scp
touch $(DATA_DIR)t1.scp
#"$(DATA_DIR)aECG Release 1 Schema and Example.zip":
$(DATA_DIR)2003-12\ Schema/example/Example\ aECG.xml:
# HL7aECG example data set
wget -q -P$(DATA_DIR) https://www.hl7.org/documentcenter/public/wg/rcrim/annecg/aECG%20Release%201%20Schema%20and%20Example.zip
unzip -u $(DATA_DIR)"aECG Release 1 Schema and Example.zip" -d $(DATA_DIR)
$(TEMP_DIR)t1.hl7: $(DATA_DIR)2003-12\ Schema/example/Example\ aECG.xml
$(COPY) $(DATA_DIR)2003-12\ Schema/example/Example\ aECG.xml $(TEMP_DIR)t1.hl7
#rm -rf "$(TEMP_DIR)aECG Release 1 Schema and Example.zip"
#rm -rf "$(TEMP_DIR)2003-12 Schema"
$(TEMP_DIR)Osas2002plusQRS.edf:
# EDF+ example data set
wget -q -P$(TEMP_DIR) http://www.edfplus.info/downloads/files/osas.zip
unzip -u "$(TEMP_DIR)osas.zip" -d $(TEMP_DIR)
$(DATA_DIR)t1.edf: $(TEMP_DIR)Osas2002plusQRS.edf
cp "$(TEMP_DIR)Osas2002plusQRS.edf" $(DATA_DIR)t1.edf
touch $(DATA_DIR)t1.edf
asc: save2gdf
./save2gdf -f=ASCII t0.xxx $(TEMP_DIR)t1.asc
bin: save2gdf
./save2gdf -f=BIN t0.xxx $(TEMP_DIR)t1.bin
json: save2gdf
./save2gdf -JSON t0.xxx >$(TEMP_DIR)t1.xxx.json
testbin: save2gdf $(DATA_DIR)t1.edf
./save2gdf -f=BIN $(DATA_DIR)t1.edf $(TEMP_DIR)t1.hdr
./save2gdf -f=GDF $(TEMP_DIR)t1.edf >$(TEMP_DIR)t1.edf.json
./save2gdf -f=BIN $(TEMP_DIR)t1.hdr $(TEMP_DIR)t2.hdr
./save2gdf -f=GDF $(TEMP_DIR)t2.hdr $(TEMP_DIR)t2.gdf
testscp: save2gdf $(DATA_DIR)t1.scp
# test converting SCP data
./save2gdf -f=HL7 $(DATA_DIR)t1.scp $(TEMP_DIR)t1.scp.hl7
./save2gdf -f=GDF $(TEMP_DIR)t1.scp.hl7 $(TEMP_DIR)t1.scp.hl7.gdf
./save2gdf -f=SCP $(TEMP_DIR)t1.scp.hl7.gdf $(TEMP_DIR)t1.scp.hl7.gdf.scp
./save2gdf -f=GDF $(TEMP_DIR)t1.scp.hl7.gdf.scp $(TEMP_DIR)t1.scp.hl7.gdf.scp.gdf
./save2gdf -f=HL7 $(TEMP_DIR)t1.scp.hl7.gdf.scp.gdf $(TEMP_DIR)t1.scp.hl7.gdf.scp.gdf.hl7
./save2gdf -f=SCP $(TEMP_DIR)t1.scp.hl7.gdf.scp.gdf.hl7 $(TEMP_DIR)t1.scp.hl7.gdf.scp.gdf.hl7.scp
./save2gdf -f=GDF $(DATA_DIR)t1.scp $(TEMP_DIR)t1.scp.gdf
./save2gdf -f=HL7 $(TEMP_DIR)t1.scp.gdf $(TEMP_DIR)t1.scp.gdf.hl7
./save2gdf -f=SCP $(TEMP_DIR)t1.scp.gdf.hl7 $(TEMP_DIR)t1.scp.gdf.hl7.scp
./save2gdf -f=HL7 $(TEMP_DIR)t1.scp.gdf.hl7.scp $(TEMP_DIR)t1.scp.gdf.hl7.scp.hl7
./save2gdf -f=GDF $(TEMP_DIR)t1.scp.gdf.hl7.scp.hl7 $(TEMP_DIR)t1.scp.gdf.hl7.scp.hl7.gdf
./save2gdf -f=SCP $(TEMP_DIR)t1.scp.gdf.hl7.scp.hl7.gdf $(TEMP_DIR)t1.scp.gdf.hl7.scp.hl7.gdf.scp
testhl7: save2gdf $(TEMP_DIR)t1.hl7
# test converting HL7aECG data
./save2gdf -f=GDF $(TEMP_DIR)t1.hl7 $(TEMP_DIR)t1.hl7.gdf
./save2gdf -f=SCP $(TEMP_DIR)t1.hl7.gdf $(TEMP_DIR)t1.hl7.gdf.scp
./save2gdf -f=HL7 $(TEMP_DIR)t1.hl7.gdf.scp $(TEMP_DIR)t1.hl7.gdf.scp.hl7
./save2gdf -f=SCP $(TEMP_DIR)t1.hl7.gdf.scp.hl7 $(TEMP_DIR)t1.hl7.gdf.scp.hl7.scp
./save2gdf -f=GDF $(TEMP_DIR)t1.hl7.gdf.scp.hl7.scp $(TEMP_DIR)t1.hl7.gdf.scp.hl7.scp.gdf
./save2gdf -f=HL7 $(TEMP_DIR)t1.hl7.gdf.scp.hl7.scp.gdf $(TEMP_DIR)t1.hl7.gdf.scp.hl7.scp.gdf.hl7
./save2gdf -f=SCP $(TEMP_DIR)t1.hl7 $(TEMP_DIR)t1.hl7.scp
./save2gdf -f=GDF $(TEMP_DIR)t1.hl7.scp $(TEMP_DIR)t1.hl7.scp.gdf
./save2gdf -f=HL7 $(TEMP_DIR)t1.hl7.scp.gdf $(TEMP_DIR)t1.hl7.scp.gdf.hl7
./save2gdf -f=GDF $(TEMP_DIR)t1.hl7.scp.gdf.hl7 $(TEMP_DIR)t1.hl7.scp.gdf.hl7.gdf
./save2gdf -f=SCP $(TEMP_DIR)t1.hl7.scp.gdf.hl7.gdf $(TEMP_DIR)t1.hl7.scp.gdf.hl7.gdf.scp
./save2gdf -f=HL7 $(TEMP_DIR)t1.hl7.scp.gdf.hl7.gdf.scp $(TEMP_DIR)t1.hl7.scp.gdf.hl7.gdf.scp.hl7
test: $(DATA_DIR)t1.scp save2scp save2aecg save2gdf
# biosig4python
# includes test for on-the-fly compression and decompression
./save2gdf -z $(DATA_DIR)t1.scp $(TEMP_DIR)t1.scp.gdf
./save2gdf -f=SCP -z $(DATA_DIR)t1.scp $(TEMP_DIR)t1.scp.scp
./save2gdf -f=HL7 -z $(DATA_DIR)t1.scp $(TEMP_DIR)t1.scp.hl7
./save2gdf $(TEMP_DIR)t1.scp.gdf.gz $(TEMP_DIR)t1.scp.gdf.gdf
./save2gdf $(TEMP_DIR)t1.scp.scp.gz $(TEMP_DIR)t1.scp.scp.gdf
./save2gdf $(TEMP_DIR)t1.scp.hl7.gz $(TEMP_DIR)t1.scp.hl7.gdf
./save2gdf -f=SCP $(TEMP_DIR)t1.scp.gdf.gz $(TEMP_DIR)t1.scp.gdf.scp
./save2gdf -f=SCP $(TEMP_DIR)t1.scp.scp.gz $(TEMP_DIR)t1.scp.scp.scp
./save2gdf -f=SCP $(TEMP_DIR)t1.scp.hl7.gz $(TEMP_DIR)t1.scp.hl7.scp
./save2gdf -f=HL7 $(TEMP_DIR)t1.scp.gdf.gz $(TEMP_DIR)t1.scp.gdf.hl7
./save2gdf -f=HL7 $(TEMP_DIR)t1.scp.scp.gz $(TEMP_DIR)t1.scp.scp.hl7
./save2gdf -f=HL7 $(TEMP_DIR)t1.scp.hl7.gz $(TEMP_DIR)t1.scp.hl7.hl7
# python test0/test.py
zip: $(DATA_DIR)t1.scp save2gdf
# test for on-the-fly compression and decompression
# on-the-fly compression of output file
./save2gdf -z -f=GDF $(DATA_DIR)t1.scp $(TEMP_DIR)t1.gdf
./save2gdf -z -f=GDF1 $(DATA_DIR)t1.scp $(TEMP_DIR)t1.gd1
./save2gdf -z -f=EDF $(DATA_DIR)t1.scp $(TEMP_DIR)t1.edf
./save2gdf -z -f=BDF $(DATA_DIR)t1.scp $(TEMP_DIR)t1.bdf
./save2gdf -z -f=SCP $(DATA_DIR)t1.scp $(TEMP_DIR)t1.scp
./save2gdf -z -f=CFWB $(DATA_DIR)t1.scp $(TEMP_DIR)t1.cfw
./save2gdf -z -f=MFER $(DATA_DIR)t1.scp $(TEMP_DIR)t1.mwf
./save2gdf -z -f=HL7 $(DATA_DIR)t1.scp $(TEMP_DIR)t1.hl7
gzip -c $(DATA_DIR)t1.scp >$(TEMP_DIR)t1.scp.gz
# on-the-fly decompression of input file
./save2gdf -f=GDF $(TEMP_DIR)t1.scp.gz $(TEMP_DIR)t1.gdf
./save2gdf -f=EDF $(TEMP_DIR)t1.scp.gz $(TEMP_DIR)t1.edf
./save2gdf -f=BDF $(TEMP_DIR)t1.scp.gz $(TEMP_DIR)t1.bdf
./save2gdf -f=SCP $(TEMP_DIR)t1.scp.gz $(TEMP_DIR)t1.scp
./save2gdf -f=HL7 $(TEMP_DIR)t1.scp.gz $(TEMP_DIR)t1.hl7
./save2gdf -f=MFER $(TEMP_DIR)t1.scp.gz $(TEMP_DIR)t1.mwf
./save2gdf -f=CFWB $(TEMP_DIR)t1.scp.gz $(TEMP_DIR)t1.cfw
test6: $(DATA_DIR)t1.scp save2gdf
$(COPY) $(DATA_DIR)t1.scp $(TEMP_DIR)t0.xxx
#test7: $(DATA_DIR)t1.edf save2gdf
#$(COPY) $(DATA_DIR)t1.edf $(TEMP_DIR)t0.xxx
./save2gdf -z -f=GDF1 $(TEMP_DIR)t0.xxx $(TEMP_DIR)t1.gd1
./save2gdf -z -f=GDF $(TEMP_DIR)t0.xxx $(TEMP_DIR)t1.gdf
./save2gdf -z -f=EDF $(TEMP_DIR)t0.xxx $(TEMP_DIR)t1.edf
./save2gdf -z -f=BDF $(TEMP_DIR)t0.xxx $(TEMP_DIR)t1.bdf
./save2gdf -z -f=SCP $(TEMP_DIR)t0.xxx $(TEMP_DIR)t1.scp
./save2gdf -f=HL7 $(TEMP_DIR)t0.xxx $(TEMP_DIR)t1.hl7 # -z not supported for HL7
gzip -f $(TEMP_DIR)t1.hl7
./save2gdf -z -f=CFWB $(TEMP_DIR)t0.xxx $(TEMP_DIR)t1.cfw
./save2gdf -z -f=MFER $(TEMP_DIR)t0.xxx $(TEMP_DIR)t1.mwf
./save2gdf -f=BVA $(TEMP_DIR)t0.xxx $(TEMP_DIR)t1.bva
./save2gdf -f=GDF1 $(TEMP_DIR)t1.gd1.gz $(TEMP_DIR)t2.gd1.gd1
./save2gdf -f=GDF $(TEMP_DIR)t1.gd1.gz $(TEMP_DIR)t2.gd1.gdf
./save2gdf -f=EDF $(TEMP_DIR)t1.gd1.gz $(TEMP_DIR)t2.gd1.edf
./save2gdf -f=BDF $(TEMP_DIR)t1.gd1.gz $(TEMP_DIR)t2.gd1.bdf
./save2gdf -f=SCP $(TEMP_DIR)t1.gd1.gz $(TEMP_DIR)t2.gd1.scp
./save2gdf -f=HL7 $(TEMP_DIR)t1.gd1.gz $(TEMP_DIR)t2.gd1.hl7
./save2gdf -f=CFWB $(TEMP_DIR)t1.gd1.gz $(TEMP_DIR)t2.gd1.cfw
./save2gdf -f=GDF1 $(TEMP_DIR)t1.gdf.gz $(TEMP_DIR)t2.gdf.gd1
./save2gdf -f=GDF $(TEMP_DIR)t1.gdf.gz $(TEMP_DIR)t2.gdf.gdf
./save2gdf -f=EDF $(TEMP_DIR)t1.gdf.gz $(TEMP_DIR)t2.gdf.edf
./save2gdf -f=BDF $(TEMP_DIR)t1.gdf.gz $(TEMP_DIR)t2.gdf.bdf
./save2gdf -f=SCP $(TEMP_DIR)t1.gdf.gz $(TEMP_DIR)t2.gdf.scp
./save2gdf -f=HL7 $(TEMP_DIR)t1.gdf.gz $(TEMP_DIR)t2.gdf.hl7
./save2gdf -f=CFWB $(TEMP_DIR)t1.gdf.gz $(TEMP_DIR)t2.gdf.cfw
./save2gdf -f=GDF1 $(TEMP_DIR)t1.edf.gz $(TEMP_DIR)t2.edf.gd1
./save2gdf -f=GDF $(TEMP_DIR)t1.edf.gz $(TEMP_DIR)t2.edf.gdf
./save2gdf -f=EDF $(TEMP_DIR)t1.edf.gz $(TEMP_DIR)t2.edf.edf
./save2gdf -f=BDF $(TEMP_DIR)t1.edf.gz $(TEMP_DIR)t2.edf.bdf
./save2gdf -f=SCP $(TEMP_DIR)t1.edf.gz $(TEMP_DIR)t2.edf.scp
./save2gdf -f=HL7 $(TEMP_DIR)t1.edf.gz $(TEMP_DIR)t2.edf.hl7
./save2gdf -f=CFWB $(TEMP_DIR)t1.edf.gz $(TEMP_DIR)t2.edf.cfw
./save2gdf -f=GDF1 $(TEMP_DIR)t1.bdf.gz $(TEMP_DIR)t2.bdf.gd1
./save2gdf -f=GDF $(TEMP_DIR)t1.bdf.gz $(TEMP_DIR)t2.bdf.gdf
./save2gdf -f=EDF $(TEMP_DIR)t1.bdf.gz $(TEMP_DIR)t2.bdf.edf
./save2gdf -f=BDF $(TEMP_DIR)t1.bdf.gz $(TEMP_DIR)t2.bdf.bdf
./save2gdf -f=SCP $(TEMP_DIR)t1.bdf.gz $(TEMP_DIR)t2.bdf.scp
./save2gdf -f=HL7 $(TEMP_DIR)t1.bdf.gz $(TEMP_DIR)t2.bdf.hl7
./save2gdf -f=CFWB $(TEMP_DIR)t1.bdf.gz $(TEMP_DIR)t2.bdf.cfw
./save2gdf -f=GDF1 $(TEMP_DIR)t1.scp.gz $(TEMP_DIR)t2.scp.gd1
./save2gdf -f=GDF $(TEMP_DIR)t1.scp.gz $(TEMP_DIR)t2.scp.gdf
./save2gdf -f=EDF $(TEMP_DIR)t1.scp.gz $(TEMP_DIR)t2.scp.edf
./save2gdf -f=BDF $(TEMP_DIR)t1.scp.gz $(TEMP_DIR)t2.scp.bdf
./save2gdf -f=SCP $(TEMP_DIR)t1.scp.gz $(TEMP_DIR)t2.scp.scp
./save2gdf -f=HL7 $(TEMP_DIR)t1.scp.gz $(TEMP_DIR)t2.scp.hl7
./save2gdf -f=CFWB $(TEMP_DIR)t1.scp.gz $(TEMP_DIR)t2.scp.cfw
./save2gdf -f=GDF1 $(TEMP_DIR)t1.hl7.gz $(TEMP_DIR)t2.hl7.gd1
./save2gdf -f=GDF $(TEMP_DIR)t1.hl7.gz $(TEMP_DIR)t2.hl7.gdf
./save2gdf -f=EDF $(TEMP_DIR)t1.hl7.gz $(TEMP_DIR)t2.hl7.edf
./save2gdf -f=BDF $(TEMP_DIR)t1.hl7.gz $(TEMP_DIR)t2.hl7.bdf
./save2gdf -f=SCP $(TEMP_DIR)t1.hl7.gz $(TEMP_DIR)t2.hl7.scp
./save2gdf -f=HL7 $(TEMP_DIR)t1.hl7.gz $(TEMP_DIR)t2.hl7.hl7
./save2gdf -f=CFWB $(TEMP_DIR)t1.hl7.gz $(TEMP_DIR)t2.hl7.cfw
./save2gdf -f=GDF1 $(TEMP_DIR)t1.cfw.gz $(TEMP_DIR)t2.cfw.gd1
./save2gdf -f=GDF $(TEMP_DIR)t1.cfw.gz $(TEMP_DIR)t2.cfw.gdf
./save2gdf -f=EDF $(TEMP_DIR)t1.cfw.gz $(TEMP_DIR)t2.cfw.edf
./save2gdf -f=BDF $(TEMP_DIR)t1.cfw.gz $(TEMP_DIR)t2.cfw.bdf
./save2gdf -f=SCP $(TEMP_DIR)t1.cfw.gz $(TEMP_DIR)t2.cfw.scp
./save2gdf -f=HL7 $(TEMP_DIR)t1.cfw.gz $(TEMP_DIR)t2.cfw.hl7
./save2gdf -f=GDF1 $(TEMP_DIR)t1.mwf.gz $(TEMP_DIR)t2.mwf.gd1
./save2gdf -f=GDF $(TEMP_DIR)t1.mwf.gz $(TEMP_DIR)t2.mwf.gdf
./save2gdf -f=EDF $(TEMP_DIR)t1.mwf.gz $(TEMP_DIR)t2.mwf.edf
./save2gdf -f=BDF $(TEMP_DIR)t1.mwf.gz $(TEMP_DIR)t2.mwf.bdf
./save2gdf -f=SCP $(TEMP_DIR)t1.mwf.gz $(TEMP_DIR)t2.mwf.scp
./save2gdf -f=HL7 $(TEMP_DIR)t1.mwf.gz $(TEMP_DIR)t2.mwf.hl7
testpybdf : $(TEMP_DIR)BDFtestfiles.zip
unzip -u $(TEMP_DIR)BDFtestfiles.zip -d $(TEMP_DIR) && \
python python/demo.py $(TEMP_DIR)*-256.bdf
python python/example.py $(TEMP_DIR)*-256.bdf 256 && \
python python/example.py $(TEMP_DIR)*-2048.bdf 2048
$(TEMP_DIR)BDFtestfiles.zip :
wget -P$(TEMP_DIR) http://www.biosemi.com/download/BDFtestfiles.zip
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