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####### Makefile for "BioSig for C/C++" #####################
###
### Copyright (C) 2006-2015 Alois Schloegl <alois.schloegl@ist.ac.at>
### This file is part of the "BioSig for C/C++" repository
### (biosig4c++) at http://biosig.sf.net/
###
##############################################################
##### Target: GNU/Linux
#
## make && make install build and install libbiosig, but no other tools.
# libbiosig is a prerequisite for building all the other tools below.
#
## make save2gdf - makes converter
## make install_save2gdf - installs converter
#
## make mex4o - makes mexSLOAD, mexSOPEN for Octave (requires Octave-headers)
## make mex4m - makes mexSLOAD, mexSOPEN for Matlab (requires Matlab, mex -setup must be configured)
## make mexw32 - makes mexSLOAD.mexw32, mexSOPEN.mexw32 (requires that mingw32, gnumex libraries from Matlab/Win32)
## make mexw64 - makes mexSLOAD.mexw64, mexSOPEN.mexw64 (requires that mce-w32, gnumex libraries from Matlab/Win64)
## make mex - mex4o, mex4m, mexw32, mexw64 combined
## make biosig4python - makes python interface (requires Python)
## make biosig4java - makes Java interface (experimental)
## make biosig4php - makes PHP interface (experimental)
## make biosig4perl - makes perl interface (experimental)
## make biosig4ruby - makes ruby interface (experimental)
## make biosig4tcl - makes tcl/tk interface (experimental)
##
## make win32 and make win64 are obsolete. save2gdf.exe, and libbiosig.{a,dll} for windows can now be built
## with the mingw-cross-compiler environment (mxe.cc).
## git clone https://github.com/schloegl/mxe.git
## make biosig
## should do what you want. Please note, that win32mma does now also rely that libbiosig is built with MXE.
## Make sure that CROSS or CROSS64 is properly defined when running `make`
##
## ???
## make sigviewer - makes sigviewer
##### Target: Win32
## make win32 - makes save2gdf.exe,libbiosig.lib,libbiosig.dll, for MSWindows, requires MinGW
## make mexw32 mex/mexSLOAD.mexw32 - requires MinGW32 and GNUMEX libraries from Matlab/Win32
## make win32/sigviewer.exe - requires sources of SigViewer, and MinGW32 (mex: make suitesparse zlib qt )
##### Target: Win64
## make win64 - makes save2gdf.exe,libbiosig.lib,libbiosig.dll, for MSWindows, requires MinGW
## make mexw64 mex/mexSLOAD.mexw64 - requires MCE-W64 and GNUMEX libraries from Matlab/Win64
## make win64/sigviewer.exe - requires sources of SigViewer and MCE-W64, make suitesparse zlib qt
##### Target: MacOSX w/ homebrew
## make install_homebrew installs libbiosig and save2gdf
# requires: brew tap homebrew/dupes
# brew install libiconv
###############################
# whether dynamic or static linking is used, can be controlled with
# LIBEXT. Setting it to 'a' links statically, 'so' links dynamically
#
LIBEXT = a
#LIBEXT = so
###############################
## TARGET dependencies
ifeq (,$(TARGET))
CC ?= gcc
CXX ?= g++
AR := ar rcs
PKGCONF := pkg-config
ifneq (Darwin,$(shell uname))
LFLAGS += -Wl,-z,relro,-z,now
endif
else ifeq (intel,$(TARGET))
CC := /opt/intel/bin/icc
CXX := /opt/intel/bin/icc
LD := /opt/intel/bin/xild
AR := /opt/intel/bin/xiar crs
else
prefix := $(dir $(shell which $(TARGET)-gcc))
CC := $(TARGET)-gcc
CXX := $(TARGET)-g++
LD := $(TARGET)-ld
AR := $(TARGET)-ar rcs
PKGCONF := $(TARGET)-pkg-config
ifeq (mingw, $(findstring mingw, $(TARGET)))
## add gnulib's getlogin
SOURCES += win32/getlogin.c win32/getline.c win32/getdelim.c
OBJECTS += getlogin.o getline.o getdelim.o
## exclude conflicting definition of sopen from mingw's io.h
CFLAGS += -I.
IO_H_FILE2 = io.h
CFLAGS += -I$(prefix)/include
LIBS += -lssp
LDLIBS += -liconv -liberty -lws2_32
endif
endif
ifeq (Darwin,$(shell uname))
## Homebrew:
## brew tap homebrew/dupes
## brew install libiconv
##
LD = ld
CFLAGS += -I/usr/local/opt/libiconv/include
LDLIBS += -L/usr/local/opt/libiconv/lib/ -liconv -lstdc++
LDFLAGS += -dylib -arch x86_64 -macosx_version_min 10.9
DLEXT = dylib
FULLDLEXT = ${BIOSIG_VERSION}.dylib
SONAME_PREFIX = -install_name # the last space character is crucial
SONAME_POSTFIX = .${MAJOR_VERSION}.${MINOR_VERSION}.$(DLEXT)
else
LD = $(CXX)
LDFLAGS += -shared
DLEXT = so
FULLDLEXT = so.${BIOSIG_VERSION}
SONAME_PREFIX = -Wl,-soname=
SONAME_POSTFIX = .$(DLEXT).${MAJOR_VERSION}.${MINOR_VERSION}
endif
ifeq (,$(prefix))
prefix := /usr/local
endif
DEFINES_ALL = #-D=NDEBUG
DEFINES += $(DEFINES_ALL)
#DEFINES += -D=WITH_SON
#DEFINES += -D=WITHOUT_SCP_DECODE
#DEFINES += -D=WITH_TIMESTAMPEVENT
#DEFINES += -D=WITH_TIMESTAMPCHANNEL
#DEFINES += -D=WITH_CURL
DEFINES += -D=__4HAERTEL__
DEFINES += -D=WITH_FAMOS
DEFINES += -D=WITH_FIFF
DEFINES += -D=WITHOUT_NETWORK
#DEFINES += -D=WITH_HDF
#DEFINES += -D=WITH_MATIO
#DEFINES += -D=WITH_LIBXML2
DEFINES += -D=WITH_FEF
#DEFINES += -D=WITH_PDP
#DEFINES += -D=WITH_DCMTK
#DEFINES += -D=WITH_DICOM
#DEFINES += -D=WITH_GDCM
#DEFINES += -D=WITH_GSL
#DEFINES += -D=WITH_EEPROBE
#DEFINES += -D=WITH_TDMS
#DEFINES += -D=WITH_ATF
#DEFINES += -D=WITH_AVI
#DEFINES += -D=WITH_RIFF
#DEFINES += -D=WITH_WAV
#DEFINES += -D=WITH_NEV
DEFINES += -D=MAKE_EDFLIB
ifneq (,$(findstring WITH_GDCM, $(DEFINES)))
INCPATH += -I$(wildcard /usr/include/gdcm-2*/)
LDLIBS += -lgdcmCommon -lgdcmDSED -lgdcmMEXD -lgdcmMSFF -lgdcmDICT -lgdcmIOD
endif
ifneq (,$(findstring WITH_LIBXML2, $(DEFINES)))
LDLIBS += -lxml2
endif
ifneq (,$(findstring WITH_CURL, $(DEFINES)))
LDLIBS += -lcurl
endif
ifneq (,$(findstring WITH_HDF, $(DEFINES)))
LDLIBS += -lhdf5
endif
ifneq (,$(findstring WITH_DCMTK, $(DEFINES)))
LDLIBS += -ldcmdata -loflog -lofstd
endif
ifneq (,$(findstring WITH_MATIO, $(DEFINES)))
LDLIBS += -lmatio
endif
ifneq (,$(findstring stack-protector, $(CFLAGS)))
ifneq (,$(findstring CYGWIN, $(shell uname)))
LDLIBS += -lssp -liconv
endif
endif
LIBS += $(LDLIBS)
DELETE = rm -f
COPY = cp -f
DATA_DIR = data/
DATA_DIR_CFS = $(HOME)/L/data/test/CFS/
TEMP_DIR = test/
SED = sed
VERBOSE := -V0
##########################################################
## set Matlab and Octave variables
ifeq (undefined,$(origin MATLABDIR))
ifeq (Darwin,$(shell uname))
MATLABDIR := $(shell find /Applications/MATLAB* -name bin -type d -depth 1 2>/dev/null | head -1)
else
MATLABDIR ?= $(shell find /usr/local/MATLAB* -maxdepth 2 -name bin -type d 2>/dev/null | head -1)
endif
endif
ifeq (,$(MATLABDIR))
#$(warning MATLABDIR is not defined)
else
MEX = $(MATLABDIR)/mex
MEX_EXT := $(shell $(MATLABDIR)/mexext)
endif
# use environment variable to define OCTAVE_VERSION
# e.g. export OCTAVE_VERSION=-3.6.2
# Octave - global install (e.g. from debian package)
#OCTAVE_VERSION =
# Octave - local install (e.g. compiled from sources)
#OCTAVE_VERSION = -3.6.1
OCT := mkoctfile$(OCTAVE_VERSION)
##########################################################
first: mex4o
#############################################################
# Compilation: Implicit, default rules
#############################################################
#############################################################
# MEX-files for Octave and Matlab
#############################################################
# include directory for Win32-Matlab include
W32MAT_INC = $(HOME)/bin/win32/Matlab/R2010b/extern/include/ -I../win32
W64MAT_INC = $(HOME)/bin/win64/Matlab/R2010b/extern/include/ -I../win64
# path to GNUMEX libraries, available from here http://sourceforge.net/projects/gnumex/
GNUMEX = $(HOME)/bin/win32/gnumex
GNUMEX64 = $(HOME)/bin/win64/gnumex
mexSOPEN.cpp : mexSLOAD.cpp
echo "#define mexSOPEN" > mexSOPEN.cpp
cat mexSLOAD.cpp >> mexSOPEN.cpp
MEX_OBJECTS = mexSLOAD.cpp mexSOPEN.cpp mexSSAVE.cpp
mex4o: $(patsubst %.cpp, %.mex, $(MEX_OBJECTS))
oct: $(patsubst %.cpp, %.oct, $(MEX_OBJECTS))
mexw32: $(patsubst %.cpp, %.mexw32, $(MEX_OBJECTS))
mexw64: $(patsubst %.cpp, %.mexw64, $(MEX_OBJECTS))
ifdef MEX_EXT
mex: mex4o mex4m mexw32 mexw64
mex4m: $(patsubst %.cpp, %.$(MEX_EXT), $(MEX_OBJECTS))
ifneq (Darwin,$(shell uname))
%.$(MEX_EXT): %.cpp
$(MEX) $(MEX_OPTION) $(DEFINES) $(shell $(PKGCONF) --cflags libbiosig) "$<" $(shell $(PKGCONF) --libs libbiosig) -o "$@"
else
%.$(MEX_EXT): %.cpp
## $(MEX) $(MEX_OPTION) $(DEFINES) "$<" $(shell $(PKGCONF) --libs libbiosig) -o "$@"
$(MEX) $(DEFINES) $(shell $(PKGCONF) --cflags libbiosig) -outdir mex "$<" -lbiosig
endif
else
mex: mex4o mexw32 mexw64
endif
%.mex: %.cpp
$(OCT) $(DEFINES) $(shell $(PKGCONF) --cflags libbiosig) -v -g --mex "$<" -lbiosig $(shell $(PKGCONF) --libs libbiosig) -o "$@"
%.oct: %.cpp
$(OCT) $(DEFINES) $(shell $(PKGCONF) --cflags libbiosig) "$<" -lbiosig $(shell $(PKGCONF) --libs libbiosig) -o "$@"
%.mexw32: %.cpp Makefile biosig.h biosig-dev.h
## $(CROSS)-g++ is used instead of $(CXX), so it can be called from biosig as well as mxe.
$(CROSS)-g++ -shared $(GNUMEX)/mex.def -DMATLAB_MEX_FILE $(DEFINES) -x c++ \
-I$(prefix)/include \
-I$(W32MAT_INC) -O2 -o "$@" -L$(GNUMEX) -s "$<" -llibmx -llibmex -lbiosig -liconv -lssp $(LDLIBS) -lws2_32
%.mexw64: %.cpp Makefile biosig.h biosig-dev.h
$(CROSS64)-g++ -shared $(GNUMEX64)/mex.def -DMATLAB_MEX_FILE $(DEFINES) -x c++ \
-I$(prefix)/include \
-I$(W64MAT_INC) -O2 -o "$@" -L$(GNUMEX64) -s "$<" -llibmx -llibmex -lbiosig -liconv -lssp $(LDLIBS) -lws2_32
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