File: test1.bed

package info (click to toggle)
biosyntax 1.0.0b-6
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 6,020 kB
  • sloc: sh: 876; javascript: 292; xml: 246; makefile: 52
file content (148 lines) | stat: -rw-r--r-- 5,478 bytes parent folder | download | duplicates (4)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
chr5	149433731	149433769	(CTG)n	225	+
chr5	149434120	149434212	MIR	346	-
chr5	149434267	149434583	AluJr	1964	+
chr5	149436242	149436426	MIR	485	-
chr5	149437240	149437536	L3	577	-
chr5	149437537	149437696	MER5B	422	+
chr5	149437704	149437857	MER5A1	419	-
chr5	149438414	149438530	MIR3	304	+
chr5	149438615	149438906	AluSp	2318	-
chr5	149439015	149439073	L2c	232	+
chr5	149439490	149439600	MIR3	215	+
chr5	149439608	149439920	AluSc8	2455	+
chr5	149441588	149441715	MIR3	288	+
chr5	149441749	149441810	(TCCA)n	294	+
chr5	149441824	149442183	L1MB2	1886	-
chr5	149442193	149442379	L2a	525	-
chr5	149442588	149442869	AluJb	1555	-
chr5	149442918	149443073	AluJo	963	-
chr5	149443548	149443863	L1PA16	1896	+
chr5	149443886	149443942	L3	197	+
chr5	149445529	149445681	L3	444	+
chr5	149445794	149446002	MIRb	424	-
chr5	149446010	149446147	MIR3	393	-
chr5	149446678	149446891	MIRb	394	+
chr5	149446888	149447084	MIRb	557	+
chr5	149447213	149447258	L2c	183	+
chr5	149447419	149447534	FLAM_A	702	-
chr5	149447550	149447674	L2a	248	+
chr5	149447796	149447821	(CAG)n	192	+
chr5	149447955	149448012	L2b	362	+
chr5	149448119	149448264	L3	215	-
chr5	149448476	149448529	MIRc	213	+
chr5	149448530	149448648	MIRb	428	+
chr5	149449353	149449425	G-rich	207	+
chr5	149450430	149450493	L3	195	-
chr5	149450564	149450777	MIRb	567	+
chr5	149450945	149450972	AT_rich	27	+
chr5	149451119	149451291	Tigger15a	335	-
chr5	149451562	149451669	MER117	394	+
chr5	149451774	149452079	AluSq2	2383	+
chr5	149452116	149452295	LTR85b	346	+
chr5	149452574	149452698	LTR85b	405	+
chr5	149452722	149452788	MIR3	249	-
chr5	149453224	149453342	MIR3	249	+
chr5	149453382	149453405	(CA)n	186	+
chr5	149453473	149453867	MLT1K	867	+
chr5	149453868	149454036	AluSc8	1338	-
chr5	149454288	149454770	L2c	269	+
chr5	149454755	149454940	L2a	318	+
chr5	149454925	149455333	L2a	971	+
chr5	149455639	149455726	L2c	204	+
chr5	149455884	149455960	(TCTA)n	595	+
chr5	149455962	149456091	MIR	405	-
chr5	149456200	149456504	L2c	393	+
chr5	149457035	149457224	MIRb	589	+
chr5	149457477	149457561	MIRb	186	+
chr5	149458003	149458616	L2a	546	+
chr5	149458655	149458757	MIR3	257	-
chr5	149459163	149459321	L2a	292	+
chr5	149460023	149460252	MIRb	442	+
chr5	149461149	149461290	MIR	450	+
chr5	149462194	149462373	MIRb	526	+
chr5	149462912	149462964	(CA)n	468	+
chr5	149463207	149463617	MER4C	2567	+
chr5	149463618	149463906	AluSx1	1976	+
chr5	149463906	149464035	(GGAA)n	867	+
chr5	149464035	149464314	AluSg4	2142	-
chr5	149464329	149464352	AT_rich	23	+
chr5	149464458	149464553	L1ME2	344	+
chr5	149464559	149464856	AluSx	2265	+
chr5	149465439	149465602	MER5A1	710	+
chr5	149465634	149465787	MIR3	312	-
chr5	149466442	149466535	MER21B	465	+
chr5	149466540	149466642	FRAM	621	-
chr5	149466642	149466844	MER21B	605	+
chr5	149466885	149467106	MIR	711	-
chr5	149467191	149467284	HAL1	299	-
chr5	149467284	149467598	AluJb	2063	-
chr5	149467672	149467729	(TG)n	206	+
chr5	149467779	149468084	L1MB5	7061	+
chr5	149468084	149468396	AluSz	2414	-
chr5	149468396	149468584	L1MB5	7061	+
chr5	149468584	149468604	(CAAAA)n	180	+
chr5	149468604	149469848	L1MB5	7061	+
chr5	149469868	149470132	L1ME1	851	-
chr5	149470268	149470541	L1PA17	1074	+
chr5	149470546	149471340	L1MB5	3725	+
chr5	149471332	149471600	L1ME1	481	+
chr5	149471603	149471816	MER58A	1132	-
chr5	149471921	149472015	MER44A	1334	-
chr5	149472015	149472372	THE1B	2454	-
chr5	149472372	149472576	MER44A	1334	-
chr5	149472636	149472940	AluSx1	2263	-
chr5	149472940	149473188	L1ME1	509	+
chr5	149473188	149473344	L1MA6	1058	+
chr5	149473344	149473642	AluSq2	2309	+
chr5	149473642	149473674	L1MA6	1058	+
chr5	149473674	149473842	L1ME1	729	+
chr5	149474694	149475670	L1ME1	5852	+
chr5	149475670	149475980	AluSq2	2308	+
chr5	149475980	149476543	L1ME1	5852	+
chr5	149476543	149476834	AluJr4	1547	+
chr5	149476834	149477968	L1ME1	5852	+
chr5	149477968	149478067	HY3	747	+
chr5	149478067	149478453	L1ME1	5852	+
chr5	149478453	149478770	AluSq2	2246	-
chr5	149478770	149479455	L1ME1	2747	+
chr5	149479465	149479621	L1ME3B	605	+
chr5	149479630	149479752	FLAM_A	760	+
chr5	149479853	149480065	AluY	1770	-
chr5	149480134	149480482	L1ME3B	1097	+
chr5	149480486	149480548	L1M5	228	-
chr5	149480555	149481018	MLT1H	924	+
chr5	149481444	149482022	L1ME4a	1241	-
chr5	149482043	149482341	AluSx1	2252	-
chr5	149482355	149482537	L1MC	324	-
chr5	149482541	149482739	MIRc	460	-
chr5	149482850	149483053	L3	271	-
chr5	149483150	149483407	L2c	284	-
chr5	149483493	149483639	MER5A	287	+
chr5	149484092	149484265	MIRb	735	-
chr5	149484319	149484353	(TGAA)n	205	+
chr5	149484432	149484629	AluSx	2051	-
chr5	149484629	149484926	AluSc8	2333	+
chr5	149484926	149484948	(TA)n	198	+
chr5	149484948	149485078	AluSx	2051	-
chr5	149485080	149485383	AluJr	1749	-
chr5	149485391	149485636	MIR	921	-
chr5	149486497	149486647	L2b	184	+
chr5	149486715	149486879	L2a	213	-
chr5	149486884	149486975	MER94	306	-
chr5	149486981	149487211	MIR	707	-
chr5	149487247	149487367	MIRb	291	+
chr5	149487414	149487727	L2b	391	-
chr5	149487935	149488132	L2b	297	-
chr5	149488786	149488877	MIRb	295	+
chr5	149489005	149489225	MER113	485	+
chr5	149489296	149489465	L1ME4a	392	+
chr5	149489465	149490000	LTR10A	2737	+
chr5	149490026	149490246	L1ME4a	326	+
chr5	149491142	149491221	MIR3	195	+
chr5	149491221	149491318	MIRb	374	+
chr5	149491358	149491433	LTR24B	448	+
chr5	149491544	149491794	LTR24B	458	+
chr5	149491835	149491961	MIR	410	+
chr5	149491994	149492121	MIR3	242	-
chr5	149492804	149492899	C-rich	213	+
chr5	149492837	149492894	CT-rich	286	+