File: mario.sam

package info (click to toggle)
biosyntax 1.0.0b-6
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 6,020 kB
  • sloc: sh: 876; javascript: 292; xml: 246; makefile: 52
file content (34 lines) | stat: -rw-r--r-- 7,430 bytes parent folder | download | duplicates (4)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
@HD	VN:1.0	SO:coordinate
@SQ	SN:chr13	LN:1023550
@RG	ID:MARIO	LB:PLUMBERS	SM:HG008BIT	PL:ILLUMINA	PU:SNES-ST64
@PG	ID:bowtie2	PN:bowtie2	VN:2.2.6	CL:"/usr/bin/bowtie2-align-s -8bit -1 inpipe1 -2 inpipe2"
SNES1993.19247142	163	chr13	10001	22	67S34M	=	10044	168	AAAAAAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCAAAAAAAGGGGGGGGGGGGGAAAA	@@?DDD:ADFHHHHIJ@ECHEIIHIJGIIIJIJIIE@BGEGIHGF<=ABD;8;;B8@@BBDBB?(8(8@@AB?BB<<AB?<>A???39><<59955(8<??	AS:i:62	XN:i:0	XM:i:1
SNES1993.35201119	73	chr13	10001	28	101M	=	10001	0	AAAAAAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCAAAAAAAGGGGGGGGGGGGGAAAA	@@CFFFFFFHHHHJJIHGHFGHCGIIGHICGGHGGIJIAGIIFHHFFFDCEE>;BB@BD7BD<CD3<?CB>;-5-2>9B7<<@BBDB@B5-288?><A<A9	AS:i:113	XN:i:0	XM:i:4
SNES1993.11914589	69	chr13	10001	0	*	=	10001	0	AAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGGGGGGGGGAAAA	CCCFFFFFHHHGHJJJJIIGIHJJJIGJBHG'3;(:35:-7&60<?(+5-57&+<<3(9((3+:4<1+(:@CA???((:89<8<55<B<095@########	YT:Z:UP	RG:Z:SNES1993
SNES1993.31258687	133	chr13	10001	0	95M6I	=	10001	0	AAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGGGGGGGGGAAAA	BB@FFDDFDFHFHIBFHII:C:DDGGIIJBGEGHGHIGIIJIJGI@DEEHEEBDA>@DCCDDDDD?@B7;983>>ACC>CCDD?@@BD#############	YT:Z:UP	RG:Z:SNES1993
SNES1993.32192276	133	chr13	10001	0	*	=	10001	0	AAAAAAAAAAAAAAAATTTTTTTTTTTTTGGGGGGGTTTTTGGGGAAAATTTTTTTTTTTTAAAA	?8:=+B:BA<DFH<911<E=9E<FAE:@G)8?<;D;;1B6';49'?A@#####################################################	YT:Z:UP	RG:Z:SNES1993
SNES1993.35201119	133	chr13	10001	0	*	=	10001	0	AAAAAAAAAAAAAAAATTTTTTTTTTTTTGGGGGGGTTTTTGGGGAAAATTTTTTTTTTTTAAAA	BC@DDDDDHHHHHE2AFHEFEEHHE?DDGBBDHEEFD8BBBCG;C@EHEH>CA35(9/;B><<9;;@8;@B;;;08<B<8<9-0819>A8(9>+99???@#	YT:Z:UP	RG:Z:SNES1993
SNES1993.35553638	69	chr13	10001	0	*	=	10001	0	AAAAAAAAAAAATTTTGGGGTTTTGGGGGGGGGGGGTTTTTGGGGGGGGGGGGTTTTTTTTAAAA	BBCFFFFFGHHHHIIIGJJJJJGHIFGGGHHHIJJJJHGIHGGHHGJHHHHH@CDACDDDDDDDDDABBDBBDA@@CCCDB9>09<CC32388A#######	YT:Z:UP	RG:Z:SNES1993
SNES1993.55013408	69	chr13	10001	0	*	=	10001	0	AAAAAAAAAAAATTTTGGGGTTTTGGGGGGGGGGGGTTTTTGGGGGGGGGGGGTTTTTTTTAAAA	@@@B?@DDHFHFDHIIIIIIIGIIIEBFG9@AHFGAEHEGHICEHE<D?=CB=??==@;77;B?BCCA@CDD3??9<9B9<BBBBB98A############	YT:Z:UP	RG:Z:SNES1993
SNES1993.11914589	153	chr13	10001	22	8D93M	=	10001	0	AAAAAAAAAAAATTTTGGGGTTTTTTTTGGGGGGGGGGGGTTTTTGGGGGGGGGGGGTTTTAAAA	>:DBBDBDDDB@@<<?<CBDB@B<BBDBDDCC?585DDDBDCDCB=8DBB=BFEEDFJJIJIJJJIHDJIIJJIJJJJIJJJJIJJJJHHHHHFFFFFCCC	AS:i:80	XN:i:0	XM:i:9
SNES1993.31258687	89	chr13	10001	22	101M	=	10001	0	AAAAAAAAAAAATTTTGGGGTTTTTTTTGGGGGGGGGGGGTTTTTGGGGGGGGGGGGTTTTAAAA	1C>B<@DDDCCC<<DB<9CDDB<@<@>9BBA;5D@AC@<@@DDDDDB?DBBDBDDDDBD@=BDHGHGJIHEFB<.GHGEGIHIHGGIHHHHFFDEFFFCCB	AS:i:65	XN:i:0	XM:i:3
SNES1993.32192276	89	chr13	10001	22	67S34M	=	10001	0	AAAAAAAAAAAATTTTTTTTGGGGGGGGGGGGGGGGTTTTTTTTTTTTTTTTTTTTTAAAAAAAA	#######AAAB44+()(>ABA>4<<3;>>>>903AA><=3?>A>8/88>????A?9'6=?C;DCDIDIDDDD6BDDDB)@IIDDE?8@AD@:DBBDBA:<?	AS:i:62	XN:i:0	XM:i:1
SNES1993.35553638	153	chr13	10001	24	101M	=	10001	0	AAAAAAAAAAAATTTTTTTTGGGGGGGGGGGGGGGGTTTTTTTTTTTTTTTTTTTTTAAAAAAAA	<DDDDBDD@DB@<A8DDDDDDDDDDDDDDDDDDCD@@;DDCEEFFFFHHHJJIJJIJJJJJJJJJJJJJIJJJJJJIIJIJJIGC<JJHHHHHFFFFFC@C	AS:i:94	XN:i:0	XM:i:8
SNES1993.55013408	153	chr13	10001	24	101M	=	10001	0	AAAAAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTAAAAAAAA	3:C@:DDCCA<@?B<BA<?@:7DDB@DB@B?57B?;B<;52<70<DBDB@;@@3>;=BB@9FFEEGBA@GF<DGDGGGHEFIHE?ABHDDGHHDFFDD=;=	AS:i:104	XN:i:0	XM:i:2
SNES1993.7932405	69	chr13	10003	0	*	=	10003	0	AAAAAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTAAAAAAAA	??@=DBDDHFFFFFHDFCFGGIJJIIGBFEFFD>@/;@CB?BBBB2<A7AC8?BCB?<<??3>(82+43:C:93<<9@0-<1<B@@9::>:>+9@C(9?##	YT:Z:UP	RG:Z:SNES1993
SNES1993.7932405	1177	chr13	10003	36	101M	=	10003	0	AAAAAAAATTTTTTTTTTTTTTTTCCCCTTTTTTTTTTTTTCCCTTTTTTTTAAAAAAAAATTAA	############?90&B<9DDBA>DC8+B@??<2&+0<3BB@BD@2DB?CABACDC@@A??BCDFFFHE<@8AHHFEDB<BGGBIJJIFGHHHDDFDF@@B	AS:i:128	XN:i:0	XM:i:11
SNES1993.19247142	83	chr13	10044	22	50M51S	=	10001	-168	AAAAAAAATTTTTTTTTTTTTTTTCCCCTTTTTTTTTTTTTCCCTTTTTTTTAAAAAAAAATTAA	<BB@B<21?7@5&A>CC>C>C95@3AA>?A@DFFDEDC;)EHEE;JIIH@AIEIGFD:GGGEIJIIIJJIJJGHEHF<IGIIJIFJJIGGHHHFFFFFCCC	AS:i:53	XN:i:0	XM:i:8
SNES1993.49659117	97	chr13	10140	44	101M	=	10664	625	GGGGGGGGTTTTTTTTTTTTTTTTTTTTCCCCTTTTTTTTTTTTCCCCAAAAAAAAATTTTTTAA	@@@DFFFFHDHAHGGGGIIHGIFGA<BBE>@6?661@0730706@9)58<2323:ACB###########################################	AS:i:198	XN:i:0	XM:i:1
SNES1993.58751284	99	chr13	10143	36	101M	=	10352	234	GGGGGGGGTTTTTTTTTTTTTTTTTTTTCCCCTTTTTTTTTTTTCCCCAAAAAAAAATTTTTTAA	@CCFFFDDHHHHHIJJJJJJIJJIJJFBBDBDBDDDDBDBBBBDDDDDCBCCDDDDDBDBB@BBDD@@B>B?CCCCD58?@BC8>>B59CC?>:<@89<A4	AS:i:202	XN:i:0	XM:i:0
SNES1993.36089268	99	chr13	10149	44	101M	=	10240	192	GGGGGGGGGGGGTTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCGGGGCCCCCCCCCTTTTTTAA	@@@DFDDAAHHHDHBDGDEGGEBC<DCCBBC696BB116BBBCB3>8@A559B(8<08<5;7;5A3>C3::;8?###########################	AS:i:198	XN:i:0	XM:i:1
SNES1993.57860057	73	chr13	10149	44	101M	=	10149	0	GGGGGGGGGGGGTTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCGGGGCCCCCCCCCTTTTTTAA	BCBFFDDFGHHHGJIJJJJJJIIEHFFC8@D@D@@DB@1BB??ACCCDDD@BD????ABBBB@BD3@C(:@@?@>AA(55<99+9AC>BDD<9AC?#####	AS:i:195	XN:i:0	XM:i:1
SNES1993.57860057	133	chr13	10149	0	*	=	10149	0	AAAAGGGGAAAAAAAAAAAATTTTCCCCCCCCGGGGCCCCCCCCCCCCCCCCCCCCCTTTTTTAA	@C@DFFFFHGHHHIJJIJJGJIDHIJGBHIGIGF9>;=A;ACD<B?08>?AC?A?A@AC>@<<:AABBDB5?CDC>AB9?AC@>?BB&)2(3>AACACACB	YT:Z:UP	RG:Z:SNES1993
SNES1993.2803200	73	chr13	10151	44	100M1S	=	10151	0	AAAAGGGGAAAAAAAAAAAATTTTCCCCCCCCGGGGCCCCCCCCCCCCCCCCCCCCCTTTTTTAA	7@?:ADDDFDFDD6:EAF6B/;AABB/9?6/3093900-2<<>A8ABB<07@<0(28&)77@?######################################	AS:i:196	XN:i:0	XM:i:1
SNES1993.2803200	537	chr13	10151	0	*	*	0	0	AAAAAAAAATTTTTTTTTTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTTTTTAA	?@??;DDDA1@FDDEAEHIDC4))807;'51A=>66<:5,(,308?CD#####################################################	YT:Z:UP	RG:Z:SNES1993
SNES1993.9345310	137	chr13	10152	44	101M	*	0	0	AAAAAAAAATTTTTTTTTTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTTTTTAA	<B@DD?DDFFHHGI<BFGDIIBHB6>BD/=@B66:6:B<?ACCCDBDB5<?BDDBDB9BBB?<CCCCDD8?BACBDD793:3AA@85<<?@C?>5399><5	AS:i:202	XN:i:0	XM:i:0
SNES1993.9927629	73	chr13	10152	44	100M1S	=	10152	0	AAAATTTTTTTTTTTTCCCCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAAAAAAAAAA	@@?DDDDDFFHFHI:F@F6BHD:/?>@?/;;7@0&65<?<<C@AC?8-57<8?B@<8-00;?9CC3::5<@524(0&05ACCCA(80?9?>@#########	AS:i:194	XN:i:0	XM:i:1
SNES1993.56664346	137	chr13	10152	44	101M	=	10152	0	AAAATTTTTTTTTTTTCCCCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAAAAAAAAAA	@@<A7ADFHBFAD@116'@@('5=B/'3=@B######################################################################	AS:i:186	XN:i:0	XM:i:4
SNES1993.9345310	69	chr13	10152	0	*	=	10152	0	AAAATTTTTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	CCCFFDFFHHHGHJIJJJIIJJIJJJJGHIIJIGBHEB>CBD@D8<ACDDDCDDDDDBBDD@CAC@DB@@@CDCCDCDCDC<9A8<?@@>>BBD@B5@###	YT:Z:UP	RG:Z:SNES1993
SNES1993.9927629	133	chr13	10152	0	*	=	10152	0	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	?1:ADDFF6D60?8).)=.=F@623=@>>;C6<3'(;??BB8?B@DB&002830&&823<@B758)0(59;@><@><@C(:34(95-50(:>3599B@A@C	YT:Z:UP	RG:Z:SNES1993
SNES1993.56664346	69	chr13	10152	0	*	chr2	2001337	0	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	??@DDBD:@DDHHBC>?CEDHGHFHEAFGE@:C@BDGIGGG'@BE=E>A####################################################	YT:Z:UP	RG:Z:SNES1993
SNES1993.26275897	99	chr13	10153	44	101M	=	10238	186	GACCCCCGAGCTGTGCTGCTCGCGGCCGCCACCGCCGGGCCCCGGCCGTCCCTGGCTCCCCTCCT	CCCFFFFFGHHHGJGIJJJJIJHFDDDDDDDDBBBDDDCBCD>CDBBDDBBA<ABBBDDDDCAC@CCD??9<C8>99>CCCC@>?BBD?CCDDBBBB####	AS:i:202	XN:i:0	XM:i:0