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Sample files for codehop
T.M. Rose, E.R. Schultz, J.G. Henikoff, C.M. McCallum & S. Henikoff,
"Consensus-degenerate hybrid oligonucleotide primers for amplification
of distantly-related sequences", Nucl. Acids Res. 26:1628-1635 (1998).
http://blocks.fhcrc.org/blocks/help/CODEHOP/CODEHOP_help.html
The codehop program is available from the NCBI repository:
ftp://ncbi.nlm.nih.gov/repository/blocks/unix/blimps/
To test the installation:
codehop.csh euk.blks euk.out
Compare euk.out with distribution/euk.out
To create codon usage files for more organisms:
coduse.csh (see instructions there)
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