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/* (C) Copyright 1993-7, Fred Hutchinson Cancer Research Center */
/* Use, modification or distribution of these programs is subject to */
/* the terms of the non-commercial licensing agreement in license.h. */
/* lists.h: definitions and functions for various ordered lists */
/* Written by: Bill Alford */
/* Change log information is at the end of the file. */
#ifndef LISTS_H_
#define LISTS_H_
#include <skiplist.h>
/*
* Exported variables and data structures
*/
typedef SkipList ScoreList;
typedef SkipList MatrixList;
typedef SkipList BlockList;
typedef SkipList SequenceList;
extern ScoreList Scores;
extern ScoreList PrintScores;
extern MatrixList Matrices;
extern BlockList Blocks;
extern SequenceList Sequences;
extern Boolean SavedScoresFlag;
extern int MinScoreOfList; /* the minimum score of the score list */
/* didn't make a function to do this */
/* because it would be worse than just */
/* having a global variable */
/*
* Exported functions
*/
/*
* initialize_lists
* initializes the lists.
* Parameters: none
* Error codes:
*/
extern void initialize_lists();
#ifndef NO_SCORES
/*
* enter_score_into_print_scores
* Places the score from Scores into PrintScores. PrintScores is a reverse
* ordered list so that the printing comes out with the largest score
* first.
* Parameters:
* Score *score: the score list entry
* void *arg: unused, here to match the procedure call in DoForSL
* Return code: SL_CONTINUE always.
* Error codes: none
*/
extern int enter_score_into_print_scores();
/*
* insert_in_score_list
* Inserts the score entry into the score list and makes sure that the
* number of elements n the list are fewer than the NumberToReport if there
* is a limit.
* Parameters:
* Score score: the score entry.
* Return codes: the same as InsertSL.
* Error codes: none
*/
extern int insert_in_score_list();
/*
* limit_Scores_list_size
* Used in insert_in_score_list to limit the size of the score list.
* Parameters:
* Score *score: the score list entry
* void *arg: unused, here to match the procedure call in DoForSL
* Return codes: SL_DELETE if the list is too big, SL_QUIT otherwise.
* Error codes: none
*/
int limit_Scores_list_size();
#endif
#endif /* LISTS_H_ */
/* Change log information follows. */
/*
Changes since version 3.2.5:
1/23/99 Added SavedScoresFlag, used by lists.c, blimps.c, scoring.c, config.c
*/
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