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begintemplate BioAxonStub
public init
public soma, dend, apic, axon
public all, somatic, basal, apical, axonal
objref all, somatic, basal, apical, axonal
objref this
create soma[1]
create dend[1]
create apic[1]
create axon[1]
proc init() {localobj nl, import
all = new SectionList()
somatic = new SectionList()
basal = new SectionList()
apical = new SectionList()
axonal = new SectionList()
forall delete_section()
// nl = new Import3d_Neurolucida3()
nl = new Import3d_SWC_read()
nl.quiet = 1
nl.input($s1)
import = new Import3d_GUI(nl, 0)
// import.quite = 1
import.instantiate(this)
simplify_axon()
}
proc simplify_axon() {
forsec axonal { delete_section() }
create axon[2]
axon[0] {
L = 30
diam = 1
nseg = 1+2*int(L/40)
all.append()
axonal.append()
}
axon[1] {
L = 30
diam = 1
nseg = 1+2*int(L/40)
all.append()
axonal.append()
}
connect axon(0), soma(0.5)
connect axon[1](0), axon[0](1)
define_shape()
}
endtemplate BioAxonStub
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