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from bmtk.builder import NetworkBuilder
"""Create Nodes"""
net = NetworkBuilder('V1')
net.add_nodes(
pop_name='excitatory', # name of specific population optional
ei='e', # Optional
location='VisL4', # Optional
model_type='population', # Required, indicates what types of cells are being model
model_template='dipde:Internal', # Required, instructs what DiPDE objects will be created
dynamics_params='exc_model.json' # Required, contains parameters used by DiPDE during initialization of object
)
net.add_nodes(
pop_name='inhibitory',
ei='i',
model_type='population',
model_template='dipde:Internal',
dynamics_params='inh_model.json'
)
"""Create edges"""
net.add_edges(
source={'ei': 'e'}, target={'ei': 'i'},
syn_weight=0.005,
nsyns=20,
delay=0.002,
dynamics_params='ExcToInh.json'
)
net.add_edges(
source={'ei': 'i'}, target={'ei': 'e'},
syn_weight=-0.002,
nsyns=10,
delay=0.002,
dynamics_params='InhToExc.json'
)
net.build()
net.save(output_dir='network')
input_net = NetworkBuilder('LGN')
input_net.add_nodes(
pop_name='tON',
ei='e',
model_type='virtual'
)
input_net.add_edges(
target=net.nodes(ei='e'),
syn_weight=0.0025,
nsyns=10,
delay=0.002,
dynamics_params='input_ExcToExc.json'
)
input_net.build()
input_net.save(output_dir='network')
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