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// Copyright 2005 The Trustees of Indiana University.
// Use, modification and distribution is subject to the Boost Software
// License, Version 1.0. (See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt)
// Authors: Jeremiah Willcock
// Douglas Gregor
// Andrew Lumsdaine
// The libstdc++ debug mode makes this test run for hours...
#ifdef _GLIBCXX_DEBUG
# undef _GLIBCXX_DEBUG
#endif
// Test for the compressed sparse row graph type
#include <boost/graph/compressed_sparse_row_graph.hpp>
#include <boost/graph/adjacency_list.hpp>
#include <boost/graph/erdos_renyi_generator.hpp>
#include <boost/graph/graph_utility.hpp>
#include <boost/random/linear_congruential.hpp>
#include <cassert>
#include <iostream>
#include <vector>
#include <algorithm>
#include <ctime>
#include <boost/lexical_cast.hpp>
#include <boost/iterator/transform_iterator.hpp>
#include <boost/limits.hpp>
#include <string>
#include <boost/graph/iteration_macros.hpp>
#include <boost/test/minimal.hpp>
// Algorithms to test against
#include <boost/graph/betweenness_centrality.hpp>
#include <boost/graph/kruskal_min_spanning_tree.hpp>
typedef boost::adjacency_list<> GraphT;
typedef boost::erdos_renyi_iterator<boost::minstd_rand, GraphT> ERGen;
struct VertexData
{
int index;
};
typedef boost::compressed_sparse_row_graph<boost::directedS, VertexData>
CSRGraphT;
template <class G1, class VI1, class G2, class VI2, class IsomorphismMap>
void assert_graphs_equal(const G1& g1, const VI1& vi1,
const G2& g2, const VI2& vi2,
const IsomorphismMap& iso) {
using boost::out_degree;
BOOST_CHECK (num_vertices(g1) == num_vertices(g2));
BOOST_CHECK (num_edges(g1) == num_edges(g2));
typedef typename boost::graph_traits<G1>::vertex_iterator vertiter1;
{
vertiter1 i, iend;
for (boost::tie(i, iend) = vertices(g1); i != iend; ++i) {
typename boost::graph_traits<G1>::vertex_descriptor v1 = *i;
typename boost::graph_traits<G2>::vertex_descriptor v2 = iso[v1];
BOOST_CHECK (vi1[v1] == vi2[v2]);
BOOST_CHECK (out_degree(v1, g1) == out_degree(v2, g2));
std::vector<std::size_t> edges1(out_degree(v1, g1));
typename boost::graph_traits<G1>::out_edge_iterator oe1, oe1end;
for (boost::tie(oe1, oe1end) = out_edges(v1, g1); oe1 != oe1end; ++oe1) {
BOOST_CHECK (source(*oe1, g1) == v1);
edges1.push_back(vi1[target(*oe1, g1)]);
}
std::vector<std::size_t> edges2(out_degree(v2, g2));
typename boost::graph_traits<G2>::out_edge_iterator oe2, oe2end;
for (boost::tie(oe2, oe2end) = out_edges(v2, g2); oe2 != oe2end; ++oe2) {
BOOST_CHECK (source(*oe2, g2) == v2);
edges2.push_back(vi2[target(*oe2, g2)]);
}
std::sort(edges1.begin(), edges1.end());
std::sort(edges2.begin(), edges2.end());
BOOST_CHECK (edges1 == edges2);
}
}
{
std::vector<std::pair<std::size_t, std::size_t> > all_edges1;
std::vector<std::pair<std::size_t, std::size_t> > all_edges2;
typename boost::graph_traits<G1>::edge_iterator ei1, ei1end;
for (boost::tie(ei1, ei1end) = edges(g1); ei1 != ei1end; ++ei1)
all_edges1.push_back(std::make_pair(vi1[source(*ei1, g1)],
vi1[target(*ei1, g1)]));
typename boost::graph_traits<G2>::edge_iterator ei2, ei2end;
for (boost::tie(ei2, ei2end) = edges(g2); ei2 != ei2end; ++ei2)
all_edges2.push_back(std::make_pair(vi2[source(*ei2, g2)],
vi2[target(*ei2, g2)]));
std::sort(all_edges1.begin(), all_edges1.end());
std::sort(all_edges2.begin(), all_edges2.end());
BOOST_CHECK (all_edges1 == all_edges2);
}
}
template<typename GraphT, typename VertexIndexMap>
class edge_to_index_pair
{
typedef typename boost::graph_traits<GraphT>::vertices_size_type
vertices_size_type;
typedef typename boost::graph_traits<GraphT>::edge_descriptor edge_descriptor;
public:
typedef std::pair<vertices_size_type, vertices_size_type> result_type;
edge_to_index_pair() : g(0), index() { }
edge_to_index_pair(const GraphT& g, const VertexIndexMap& index)
: g(&g), index(index)
{ }
result_type operator()(edge_descriptor e) const
{
return result_type(get(index, source(e, *g)), get(index, target(e, *g)));
}
private:
const GraphT* g;
VertexIndexMap index;
};
template<typename GraphT, typename VertexIndexMap>
edge_to_index_pair<GraphT, VertexIndexMap>
make_edge_to_index_pair(const GraphT& g, const VertexIndexMap& index)
{
return edge_to_index_pair<GraphT, VertexIndexMap>(g, index);
}
template<typename GraphT>
edge_to_index_pair
<GraphT,
typename boost::property_map<GraphT,boost::vertex_index_t>::const_type>
make_edge_to_index_pair(const GraphT& g)
{
typedef typename boost::property_map<GraphT,
boost::vertex_index_t>::const_type
VertexIndexMap;
return edge_to_index_pair<GraphT, VertexIndexMap>(g,
get(boost::vertex_index,
g));
}
void check_consistency(const CSRGraphT& g) {
// Do a bunch of tests on the graph internal data
// Check that m_last_source is valid
BOOST_CHECK(g.m_last_source <= num_vertices(g));
// Check that m_rowstart entries are valid, and that entries after
// m_last_source + 1 are all zero
BOOST_CHECK(g.m_rowstart[0] == 0);
for (CSRGraphT::vertices_size_type i = 0; i < g.m_last_source; ++i) {
BOOST_CHECK(g.m_rowstart[i + 1] >= g.m_rowstart[i]);
BOOST_CHECK(g.m_rowstart[i + 1] <= num_edges(g));
}
for (CSRGraphT::vertices_size_type i = g.m_last_source + 1;
i < g.m_rowstart.size(); ++i) {
BOOST_CHECK(g.m_rowstart[i] == 0);
}
// Check that m_column entries are within range
for (CSRGraphT::edges_size_type i = 0; i < num_edges(g); ++i) {
BOOST_CHECK(g.m_column[i] < num_vertices(g));
}
}
template<typename OrigGraph>
void test(const OrigGraph& g)
{
// Check copying of a graph
CSRGraphT g2(g);
check_consistency(g2);
BOOST_CHECK((std::size_t)std::distance(edges(g2).first, edges(g2).second)
== num_edges(g2));
assert_graphs_equal(g, boost::identity_property_map(),
g2, boost::identity_property_map(),
boost::identity_property_map());
// Check constructing a graph from iterators
CSRGraphT g3(boost::make_transform_iterator(edges(g2).first,
make_edge_to_index_pair(g2)),
boost::make_transform_iterator(edges(g2).second,
make_edge_to_index_pair(g2)),
num_vertices(g));
check_consistency(g3);
BOOST_CHECK((std::size_t)std::distance(edges(g3).first, edges(g3).second)
== num_edges(g3));
assert_graphs_equal(g2, boost::identity_property_map(),
g3, boost::identity_property_map(),
boost::identity_property_map());
// Check constructing a graph using add_edge and add_vertices
CSRGraphT g4;
BOOST_CHECK(num_vertices(g4) == 0);
std::size_t first_vert = add_vertices(num_vertices(g3), g4);
BGL_FORALL_VERTICES(v, g4, CSRGraphT)
g4[v].index = v;
BOOST_CHECK(first_vert == 0);
BOOST_CHECK(num_vertices(g4) == num_vertices(g3));
CSRGraphT::edge_iterator ei, ei_end;
int i;
for (boost::tie(ei, ei_end) = edges(g3), i = 0; ei != ei_end; ++ei, ++i) {
CSRGraphT::edge_descriptor e = add_edge(source(*ei, g3), target(*ei, g3), g4);
BOOST_CHECK(source(e, g4) == source(*ei, g3));
BOOST_CHECK(target(e, g4) == target(*ei, g3));
if (i % 13 == 0) check_consistency(g4);
}
assert_graphs_equal(g3, boost::identity_property_map(),
g4, boost::identity_property_map(),
boost::identity_property_map());
// Check edge_from_index (and implicitly the edge_index property map) for
// each edge in g2
// This test also checks for the correct sorting of the edge iteration
std::size_t last_src = 0, last_tgt = 0;
for (boost::tie(ei, ei_end) = edges(g2); ei != ei_end; ++ei) {
BOOST_CHECK(edge_from_index(get(boost::edge_index, g2, *ei), g2) == *ei);
std::size_t src = get(boost::vertex_index, g2, source(*ei, g2));
std::size_t tgt = get(boost::vertex_index, g2, target(*ei, g2));
BOOST_CHECK(src > last_src || (src == last_src && tgt >= last_tgt));
last_src = src;
last_tgt = tgt;
}
// Check out edge iteration and vertex iteration for sortedness
// Also, check a few runs of edge and edge_range
CSRGraphT::vertex_iterator vi, vi_end;
std::size_t last_vertex = 0;
bool first_iter = true;
for (boost::tie(vi, vi_end) = vertices(g2); vi != vi_end; ++vi) {
std::size_t v = get(boost::vertex_index, g2, *vi);
BOOST_CHECK(first_iter || v > last_vertex);
last_vertex = v;
first_iter = false;
CSRGraphT::out_edge_iterator oei, oei_end;
std::size_t last_tgt = 0;
for (boost::tie(oei, oei_end) = out_edges(*vi, g2); oei != oei_end; ++oei) {
BOOST_CHECK(source(*oei, g2) == *vi);
CSRGraphT::vertex_descriptor tgtd = target(*oei, g2);
std::size_t tgt = get(boost::vertex_index, g2, tgtd);
BOOST_CHECK(tgt >= last_tgt);
last_tgt = tgt;
std::pair<CSRGraphT::edge_descriptor, bool> edge_info = edge(*vi, tgtd, g2);
BOOST_CHECK(edge_info.second == true);
BOOST_CHECK(source(edge_info.first, g2) == *vi);
BOOST_CHECK(target(edge_info.first, g2) == tgtd);
std::pair<CSRGraphT::out_edge_iterator, CSRGraphT::out_edge_iterator> er =
edge_range(*vi, tgtd, g2);
BOOST_CHECK(er.first != er.second);
for (; er.first != er.second; ++er.first) {
BOOST_CHECK(source(*er.first, g2) == *vi);
BOOST_CHECK(target(*er.first, g2) == tgtd);
}
}
// Find a vertex for testing
CSRGraphT::vertex_descriptor test_vertex = vertex(num_vertices(g2) / 2, g2);
int edge_count = 0;
CSRGraphT::out_edge_iterator oei2, oei2_end;
for (boost::tie(oei2, oei_end) = out_edges(*vi, g2); oei2 != oei_end; ++oei2) {
if (target(*oei2, g2) == test_vertex)
++edge_count;
}
// Test edge and edge_range on an edge that may not be present
std::pair<CSRGraphT::edge_descriptor, bool> edge_info =
edge(*vi, test_vertex, g2);
BOOST_CHECK(edge_info.second == (edge_count != 0));
std::pair<CSRGraphT::out_edge_iterator, CSRGraphT::out_edge_iterator> er =
edge_range(*vi, test_vertex, g2);
BOOST_CHECK(er.second - er.first == edge_count);
}
// Run brandes_betweenness_centrality, which touches on a whole lot
// of things, including VertexListGraph and IncidenceGraph
using namespace boost;
std::vector<double> vertex_centralities(num_vertices(g3));
std::vector<double> edge_centralities(num_edges(g3));
brandes_betweenness_centrality
(g3,
make_iterator_property_map(vertex_centralities.begin(),
get(boost::vertex_index, g3)),
make_iterator_property_map(edge_centralities.begin(),
get(boost::edge_index, g3)));
// Extra qualifications for aCC
// Invert the edge centralities and use these as weights to
// Kruskal's MST algorithm, which will test the EdgeListGraph
// capabilities.
double max_val = (std::numeric_limits<double>::max)();
for (std::size_t i = 0; i < num_edges(g3); ++i)
edge_centralities[i] =
edge_centralities[i] == 0.0? max_val : 1.0 / edge_centralities[i];
typedef boost::graph_traits<CSRGraphT>::edge_descriptor edge_descriptor;
std::vector<edge_descriptor> mst_edges;
mst_edges.reserve(num_vertices(g3));
kruskal_minimum_spanning_tree
(g3, std::back_inserter(mst_edges),
weight_map(make_iterator_property_map(edge_centralities.begin(),
get(boost::edge_index, g3))));
}
void test(int nnodes, double density, int seed)
{
boost::minstd_rand gen(seed);
std::cout << "Testing " << nnodes << " density " << density << std::endl;
GraphT g(ERGen(gen, nnodes, density), ERGen(), nnodes);
test(g);
}
void test_graph_properties()
{
using namespace boost;
typedef compressed_sparse_row_graph<directedS,
no_property,
no_property,
property<graph_name_t, std::string> >
CSRGraphT;
CSRGraphT g;
BOOST_CHECK(get_property(g, graph_name) == "");
set_property(g, graph_name, "beep");
BOOST_CHECK(get_property(g, graph_name) == "beep");
}
struct Vertex
{
double centrality;
};
struct Edge
{
Edge(double weight) : weight(weight), centrality(0.0) { }
double weight;
double centrality;
};
void test_vertex_and_edge_properties()
{
using namespace boost;
typedef compressed_sparse_row_graph<directedS, Vertex, Edge>
CSRGraphWithPropsT;
typedef std::pair<int, int> E;
E edges_init[6] = { E(0, 1), E(0, 3), E(1, 2), E(3, 1), E(3, 4), E(4, 2) };
double weights[6] = { 1.0, 1.0, 0.5, 1.0, 1.0, 0.5 };
double centrality[5] = { 0.0, 1.5, 0.0, 1.0, 0.5 };
CSRGraphWithPropsT g(&edges_init[0], &edges_init[0] + 6, &weights[0], 5, 6);
brandes_betweenness_centrality
(g,
centrality_map(get(&Vertex::centrality, g)).
weight_map(get(&Edge::weight, g)).
edge_centrality_map(get(&Edge::centrality, g)));
BGL_FORALL_VERTICES(v, g, CSRGraphWithPropsT)
BOOST_CHECK(g[v].centrality == centrality[v]);
}
int test_main(int argc, char* argv[])
{
// Optionally accept a seed value
int seed = std::time(0);
if (argc > 1) seed = boost::lexical_cast<int>(argv[1]);
std::cout << "Seed = " << seed << std::endl;
{
std::cout << "Testing empty graph" << std::endl;
CSRGraphT g;
test(g);
}
// test(1000, 0.05, seed);
// test(1000, 0.0, seed);
// test(1000, 0.1, seed);
test(1000, 0.001, seed);
test(1000, 0.0005, seed);
{
std::cout << "Testing partially constructed CSR graph" << std::endl;
CSRGraphT g;
add_vertices(std::size_t(5), g);
add_edge(std::size_t(1), std::size_t(2), g);
check_consistency(g);
add_edge(std::size_t(2), std::size_t(3), g);
check_consistency(g);
add_edge(std::size_t(2), std::size_t(4), g);
check_consistency(g);
CSRGraphT::edge_iterator ei, ei_end;
for (boost::tie(ei, ei_end) = edges(g); ei != ei_end; ++ei) {
BOOST_CHECK(edge_from_index(get(boost::edge_index, g, *ei), g) == *ei);
}
test(g);
}
test_graph_properties();
test_vertex_and_edge_properties();
return 0;
}
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