1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319
|
// Copyright (C) 2007 Douglas Gregor
// Use, modification and distribution is subject to the Boost Software
// License, Version 1.0. (See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt)
// This file contains code for the distributed adjacency list's
// initializations. It should not be included directly by users.
#ifndef BOOST_GRAPH_DISTRIBUTED_ADJLIST_INITIALIZE_HPP
#define BOOST_GRAPH_DISTRIBUTED_ADJLIST_INITIALIZE_HPP
#ifndef BOOST_GRAPH_USE_MPI
#error "Parallel BGL files should not be included unless <boost/graph/use_mpi.hpp> has been included"
#endif
namespace boost {
template<PBGL_DISTRIB_ADJLIST_TEMPLATE_PARMS>
template<typename EdgeIterator>
void
PBGL_DISTRIB_ADJLIST_TYPE::
initialize(EdgeIterator first, EdgeIterator last,
vertices_size_type, const base_distribution_type& distribution,
vecS)
{
process_id_type id = process_id(process_group_);
while (first != last) {
if ((process_id_type)distribution(first->first) == id) {
vertex_descriptor source(id, distribution.local(first->first));
vertex_descriptor target(distribution(first->second),
distribution.local(first->second));
add_edge(source, target, *this);
}
++first;
}
synchronize(process_group_);
}
template<PBGL_DISTRIB_ADJLIST_TEMPLATE_PARMS>
template<typename EdgeIterator, typename EdgePropertyIterator>
void
PBGL_DISTRIB_ADJLIST_TYPE::
initialize(EdgeIterator first, EdgeIterator last,
EdgePropertyIterator ep_iter,
vertices_size_type, const base_distribution_type& distribution,
vecS)
{
process_id_type id = process_id(process_group_);
while (first != last) {
if (static_cast<process_id_type>(distribution(first->first)) == id) {
vertex_descriptor source(id, distribution.local(first->first));
vertex_descriptor target(distribution(first->second),
distribution.local(first->second));
add_edge(source, target, *ep_iter, *this);
}
++first;
++ep_iter;
}
synchronize(process_group_);
}
template<PBGL_DISTRIB_ADJLIST_TEMPLATE_PARMS>
template<typename EdgeIterator, typename EdgePropertyIterator,
typename VertexListS>
void
PBGL_DISTRIB_ADJLIST_TYPE::
initialize(EdgeIterator first, EdgeIterator last,
EdgePropertyIterator ep_iter,
vertices_size_type n, const base_distribution_type& distribution,
VertexListS)
{
using boost::parallel::inplace_all_to_all;
typedef vertices_size_type vertex_number_t;
typedef typename std::iterator_traits<EdgePropertyIterator>::value_type
edge_property_init_t;
typedef std::pair<vertex_descriptor, vertex_number_t>
st_pair;
typedef std::pair<st_pair, edge_property_init_t> delayed_edge_t;
process_group_type pg = process_group();
process_id_type id = process_id(pg);
// Vertex indices
std::vector<local_vertex_descriptor> index_to_vertex;
index_to_vertex.reserve(num_vertices(*this));
BGL_FORALL_VERTICES_T(v, base(), inherited)
index_to_vertex.push_back(v);
// The list of edges we can't add immediately.
std::vector<delayed_edge_t> delayed_edges;
std::vector<std::vector<vertex_number_t> > descriptor_requests;
descriptor_requests.resize(num_processes(pg));
// Add all of the edges we can, up to the point where we run
// into a descriptor we don't know.
while (first != last) {
if (distribution(first->first) == id) {
if (distribution(first->second) != id) break;
vertex_descriptor source
(id, index_to_vertex[distribution.local(first->first)]);
vertex_descriptor target
(distribution(first->second),
index_to_vertex[distribution.local(first->second)]);
add_edge(source, target, *ep_iter, *this);
}
++first;
++ep_iter;
}
// Queue all of the remaining edges and determine the set of
// descriptors we need to know about.
while (first != last) {
if (distribution(first->first) == id) {
vertex_descriptor source
(id, index_to_vertex[distribution.local(first->first)]);
process_id_type dest = distribution(first->second);
if (dest != id) {
descriptor_requests[dest]
.push_back(distribution.local(first->second));
// Compact request list if we need to
if (descriptor_requests[dest].size() >
distribution.block_size(dest, n)) {
std::sort(descriptor_requests[dest].begin(),
descriptor_requests[dest].end());
descriptor_requests[dest].erase(
std::unique(descriptor_requests[dest].begin(),
descriptor_requests[dest].end()),
descriptor_requests[dest].end());
}
}
// Save the edge for later
delayed_edges.push_back
(delayed_edge_t(st_pair(source, first->second), *ep_iter));
}
++first;
++ep_iter;
}
// Compact descriptor requests
for (process_id_type dest = 0; dest < num_processes(pg); ++dest) {
std::sort(descriptor_requests[dest].begin(),
descriptor_requests[dest].end());
descriptor_requests[dest].erase(
std::unique(descriptor_requests[dest].begin(),
descriptor_requests[dest].end()),
descriptor_requests[dest].end());
}
// Send out all of the descriptor requests
std::vector<std::vector<vertex_number_t> > in_descriptor_requests;
in_descriptor_requests.resize(num_processes(pg));
inplace_all_to_all(pg, descriptor_requests, in_descriptor_requests);
// Reply to all of the descriptor requests
std::vector<std::vector<local_vertex_descriptor> >
descriptor_responses;
descriptor_responses.resize(num_processes(pg));
for (process_id_type dest = 0; dest < num_processes(pg); ++dest) {
for (std::size_t i = 0; i < in_descriptor_requests[dest].size(); ++i) {
local_vertex_descriptor v =
index_to_vertex[in_descriptor_requests[dest][i]];
descriptor_responses[dest].push_back(v);
}
in_descriptor_requests[dest].clear();
}
in_descriptor_requests.clear();
inplace_all_to_all(pg, descriptor_responses);
// Add the queued edges
for(typename std::vector<delayed_edge_t>::iterator i
= delayed_edges.begin(); i != delayed_edges.end(); ++i) {
process_id_type dest = distribution(i->first.second);
local_vertex_descriptor tgt_local;
if (dest == id) {
tgt_local = index_to_vertex[distribution.local(i->first.second)];
} else {
std::vector<vertex_number_t>& requests = descriptor_requests[dest];
typename std::vector<vertex_number_t>::iterator pos =
std::lower_bound(requests.begin(), requests.end(),
distribution.local(i->first.second));
tgt_local = descriptor_responses[dest][pos - requests.begin()];
}
add_edge(i->first.first, vertex_descriptor(dest, tgt_local),
i->second, *this);
}
synchronize(process_group_);
}
template<PBGL_DISTRIB_ADJLIST_TEMPLATE_PARMS>
template<typename EdgeIterator, typename VertexListS>
void
PBGL_DISTRIB_ADJLIST_TYPE::
initialize(EdgeIterator first, EdgeIterator last,
vertices_size_type n, const base_distribution_type& distribution,
VertexListS)
{
using boost::parallel::inplace_all_to_all;
typedef vertices_size_type vertex_number_t;
typedef std::pair<vertex_descriptor, vertex_number_t> delayed_edge_t;
process_group_type pg = process_group();
process_id_type id = process_id(pg);
// Vertex indices
std::vector<local_vertex_descriptor> index_to_vertex;
index_to_vertex.reserve(num_vertices(*this));
BGL_FORALL_VERTICES_T(v, base(), inherited)
index_to_vertex.push_back(v);
// The list of edges we can't add immediately.
std::vector<delayed_edge_t> delayed_edges;
std::vector<std::vector<vertex_number_t> > descriptor_requests;
descriptor_requests.resize(num_processes(pg));
// Add all of the edges we can, up to the point where we run
// into a descriptor we don't know.
while (first != last) {
if (distribution(first->first) == id) {
if (distribution(first->second) != id) break;
vertex_descriptor source
(id, index_to_vertex[distribution.local(first->first)]);
vertex_descriptor target
(distribution(first->second),
index_to_vertex[distribution.local(first->second)]);
add_edge(source, target, *this);
}
++first;
}
// Queue all of the remaining edges and determine the set of
// descriptors we need to know about.
while (first != last) {
if (distribution(first->first) == id) {
vertex_descriptor source
(id, index_to_vertex[distribution.local(first->first)]);
process_id_type dest = distribution(first->second);
if (dest != id) {
descriptor_requests[dest]
.push_back(distribution.local(first->second));
// Compact request list if we need to
if (descriptor_requests[dest].size() >
distribution.block_size(dest, n)) {
std::sort(descriptor_requests[dest].begin(),
descriptor_requests[dest].end());
descriptor_requests[dest].erase(
std::unique(descriptor_requests[dest].begin(),
descriptor_requests[dest].end()),
descriptor_requests[dest].end());
}
}
// Save the edge for later
delayed_edges.push_back(delayed_edge_t(source, first->second));
}
++first;
}
// Compact descriptor requests
for (process_id_type dest = 0; dest < num_processes(pg); ++dest) {
std::sort(descriptor_requests[dest].begin(),
descriptor_requests[dest].end());
descriptor_requests[dest].erase(
std::unique(descriptor_requests[dest].begin(),
descriptor_requests[dest].end()),
descriptor_requests[dest].end());
}
// Send out all of the descriptor requests
std::vector<std::vector<vertex_number_t> > in_descriptor_requests;
in_descriptor_requests.resize(num_processes(pg));
inplace_all_to_all(pg, descriptor_requests, in_descriptor_requests);
// Reply to all of the descriptor requests
std::vector<std::vector<local_vertex_descriptor> >
descriptor_responses;
descriptor_responses.resize(num_processes(pg));
for (process_id_type dest = 0; dest < num_processes(pg); ++dest) {
for (std::size_t i = 0; i < in_descriptor_requests[dest].size(); ++i) {
local_vertex_descriptor v =
index_to_vertex[in_descriptor_requests[dest][i]];
descriptor_responses[dest].push_back(v);
}
in_descriptor_requests[dest].clear();
}
in_descriptor_requests.clear();
inplace_all_to_all(pg, descriptor_responses);
// Add the queued edges
for(typename std::vector<delayed_edge_t>::iterator i
= delayed_edges.begin(); i != delayed_edges.end(); ++i) {
process_id_type dest = distribution(i->second);
local_vertex_descriptor tgt_local;
if (dest == id) {
tgt_local = index_to_vertex[distribution.local(i->second)];
} else {
std::vector<vertex_number_t>& requests = descriptor_requests[dest];
typename std::vector<vertex_number_t>::iterator pos =
std::lower_bound(requests.begin(), requests.end(),
distribution.local(i->second));
tgt_local = descriptor_responses[dest][pos - requests.begin()];
}
add_edge(i->first, vertex_descriptor(dest, tgt_local), *this);
}
synchronize(process_group_);
}
} // end namespace boost
#endif // BOOST_GRAPH_DISTRIBUTED_ADJLIST_INITIALIZE_HPP
|