1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164
|
// Copyright 2004, 2005 The Trustees of Indiana University.
// Use, modification and distribution is subject to the Boost Software
// License, Version 1.0. (See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt)
// Authors: Nick Edmonds
// Andrew Lumsdaine
#ifndef BOOST_GRAPH_DISTRIBUTED_RMAT_GENERATOR_HPP
#define BOOST_GRAPH_DISTRIBUTED_RMAT_GENERATOR_HPP
#ifndef BOOST_GRAPH_USE_MPI
#error "Parallel BGL files should not be included unless <boost/graph/use_mpi.hpp> has been included"
#endif
#include <boost/assert.hpp>
#include <boost/graph/parallel/algorithm.hpp>
#include <boost/graph/parallel/process_group.hpp>
#include <math.h>
namespace boost {
// Memory-scalable (amount of memory required will scale down
// linearly as the number of processes increases) generator, which
// requires an MPI process group. Run-time is slightly worse than
// the unique rmat generator. Edge list generated is sorted and
// unique.
template<typename ProcessGroup, typename Distribution,
typename RandomGenerator, typename Graph>
class scalable_rmat_iterator
{
typedef typename graph_traits<Graph>::directed_category directed_category;
typedef typename graph_traits<Graph>::vertices_size_type vertices_size_type;
typedef typename graph_traits<Graph>::edges_size_type edges_size_type;
public:
typedef std::input_iterator_tag iterator_category;
typedef std::pair<vertices_size_type, vertices_size_type> value_type;
typedef const value_type& reference;
typedef const value_type* pointer;
typedef void difference_type;
// No argument constructor, set to terminating condition
scalable_rmat_iterator()
: gen(), done(true)
{ }
// Initialize for edge generation
scalable_rmat_iterator(ProcessGroup pg, Distribution distrib,
RandomGenerator& gen, vertices_size_type n,
edges_size_type m, double a, double b, double c,
double d, bool permute_vertices = true)
: gen(), done(false)
{
BOOST_ASSERT(a + b + c + d == 1);
int id = process_id(pg);
this->gen.reset(new uniform_01<RandomGenerator>(gen));
std::vector<vertices_size_type> vertexPermutation;
if (permute_vertices)
generate_permutation_vector(gen, vertexPermutation, n);
int SCALE = int(floor(log(double(n))/log(2.)));
boost::uniform_01<RandomGenerator> prob(gen);
std::map<value_type, bool> edge_map;
edges_size_type generated = 0, local_edges = 0;
do {
edges_size_type tossed = 0;
do {
vertices_size_type u, v;
boost::tie(u, v) = generate_edge(this->gen, n, SCALE, a, b, c, d);
if (permute_vertices) {
u = vertexPermutation[u];
v = vertexPermutation[v];
}
// Lowest vertex number always comes first (this
// means we don't have to worry about i->j and j->i
// being in the edge list)
if (u > v && is_same<directed_category, undirected_tag>::value)
std::swap(u, v);
if (distrib(u) == id || distrib(v) == id) {
if (edge_map.find(std::make_pair(u, v)) == edge_map.end()) {
edge_map[std::make_pair(u, v)] = true;
local_edges++;
} else {
tossed++;
// special case - if both u and v are on same
// proc, ++ twice, since we divide by two (to
// cover the two process case)
if (distrib(u) == id && distrib(v) == id)
tossed++;
}
}
generated++;
} while (generated < m);
tossed = all_reduce(pg, tossed, boost::parallel::sum<vertices_size_type>());
generated -= (tossed / 2);
} while (generated < m);
// NGE - Asking for more than n^2 edges will result in an infinite loop here
// Asking for a value too close to n^2 edges may as well
values.reserve(local_edges);
typename std::map<value_type, bool>::reverse_iterator em_end = edge_map.rend();
for (typename std::map<value_type, bool>::reverse_iterator em_i = edge_map.rbegin();
em_i != em_end ;
++em_i) {
values.push_back(em_i->first);
}
current = values.back();
values.pop_back();
}
reference operator*() const { return current; }
pointer operator->() const { return ¤t; }
scalable_rmat_iterator& operator++()
{
if (!values.empty()) {
current = values.back();
values.pop_back();
} else
done = true;
return *this;
}
scalable_rmat_iterator operator++(int)
{
scalable_rmat_iterator temp(*this);
++(*this);
return temp;
}
bool operator==(const scalable_rmat_iterator& other) const
{
return values.empty() && other.values.empty() && done && other.done;
}
bool operator!=(const scalable_rmat_iterator& other) const
{ return !(*this == other); }
private:
// Parameters
shared_ptr<uniform_01<RandomGenerator> > gen;
// Internal data structures
std::vector<value_type> values;
value_type current;
bool done;
};
} // end namespace boost
#endif // BOOST_GRAPH_DISTRIBUTED_RMAT_GENERATOR_HPP
|