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// Copyright 2005 The Trustees of Indiana University.
// Use, modification and distribution is subject to the Boost Software
// License, Version 1.0. (See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt)
// Authors: Jeremiah Willcock
// Douglas Gregor
// Andrew Lumsdaine
// The libstdc++ debug mode makes this test run for hours...
#ifdef _GLIBCXX_DEBUG
#undef _GLIBCXX_DEBUG
#endif
// Test for the compressed sparse row graph type
#include <boost/graph/compressed_sparse_row_graph.hpp>
#include <boost/graph/adjacency_list.hpp>
#include <boost/graph/erdos_renyi_generator.hpp>
#include <boost/graph/graph_utility.hpp>
#include <boost/random/linear_congruential.hpp>
#include <boost/concept_check.hpp> // for ignore_unused_variable_warning
#include <iostream>
#include <vector>
#include <algorithm>
#include <ctime>
#include <boost/lexical_cast.hpp>
#include <boost/iterator/transform_iterator.hpp>
#include <boost/limits.hpp>
#include <string>
#include <boost/graph/iteration_macros.hpp>
#include <boost/core/lightweight_test.hpp>
// Algorithms to test against
#include <boost/graph/betweenness_centrality.hpp>
#include <boost/graph/kruskal_min_spanning_tree.hpp>
typedef boost::adjacency_list<> GraphT;
typedef boost::erdos_renyi_iterator< boost::minstd_rand, GraphT > ERGen;
struct VertexData
{
int index;
};
struct EdgeData
{
int index_e;
};
typedef boost::compressed_sparse_row_graph< boost::directedS, VertexData,
EdgeData >
CSRGraphT;
typedef boost::compressed_sparse_row_graph< boost::bidirectionalS, VertexData,
EdgeData >
BidirCSRGraphT;
template < class G1, class VI1, class G2, class VI2, class IsomorphismMap >
void assert_graphs_equal(const G1& g1, const VI1& vi1, const G2& g2,
const VI2& vi2, const IsomorphismMap& iso)
{
using boost::out_degree;
BOOST_TEST(num_vertices(g1) == num_vertices(g2));
BOOST_TEST(num_edges(g1) == num_edges(g2));
typedef typename boost::graph_traits< G1 >::vertex_iterator vertiter1;
{
vertiter1 i, iend;
for (boost::tie(i, iend) = vertices(g1); i != iend; ++i)
{
typename boost::graph_traits< G1 >::vertex_descriptor v1 = *i;
typename boost::graph_traits< G2 >::vertex_descriptor v2 = iso[v1];
BOOST_TEST(vi1[v1] == vi2[v2]);
BOOST_TEST(out_degree(v1, g1) == out_degree(v2, g2));
std::vector< std::size_t > edges1(out_degree(v1, g1));
typename boost::graph_traits< G1 >::out_edge_iterator oe1, oe1end;
for (boost::tie(oe1, oe1end) = out_edges(v1, g1); oe1 != oe1end;
++oe1)
{
BOOST_TEST(source(*oe1, g1) == v1);
edges1.push_back(vi1[target(*oe1, g1)]);
}
std::vector< std::size_t > edges2(out_degree(v2, g2));
typename boost::graph_traits< G2 >::out_edge_iterator oe2, oe2end;
for (boost::tie(oe2, oe2end) = out_edges(v2, g2); oe2 != oe2end;
++oe2)
{
BOOST_TEST(source(*oe2, g2) == v2);
edges2.push_back(vi2[target(*oe2, g2)]);
}
std::sort(edges1.begin(), edges1.end());
std::sort(edges2.begin(), edges2.end());
if (edges1 != edges2)
{
std::cerr << "For vertex " << v1 << std::endl;
std::cerr << "edges1:";
for (size_t i = 0; i < edges1.size(); ++i)
std::cerr << " " << edges1[i];
std::cerr << std::endl;
std::cerr << "edges2:";
for (size_t i = 0; i < edges2.size(); ++i)
std::cerr << " " << edges2[i];
std::cerr << std::endl;
}
BOOST_TEST(edges1 == edges2);
}
}
{
std::vector< std::pair< std::size_t, std::size_t > > all_edges1;
std::vector< std::pair< std::size_t, std::size_t > > all_edges2;
typename boost::graph_traits< G1 >::edge_iterator ei1, ei1end;
for (boost::tie(ei1, ei1end) = edges(g1); ei1 != ei1end; ++ei1)
all_edges1.push_back(
std::make_pair(vi1[source(*ei1, g1)], vi1[target(*ei1, g1)]));
typename boost::graph_traits< G2 >::edge_iterator ei2, ei2end;
for (boost::tie(ei2, ei2end) = edges(g2); ei2 != ei2end; ++ei2)
all_edges2.push_back(
std::make_pair(vi2[source(*ei2, g2)], vi2[target(*ei2, g2)]));
std::sort(all_edges1.begin(), all_edges1.end());
std::sort(all_edges2.begin(), all_edges2.end());
BOOST_TEST(all_edges1 == all_edges2);
}
}
template < typename Structure > void check_consistency_one(const Structure& g)
{
// Do a bunch of tests on the graph internal data
// Check that m_rowstart entries are valid, and that entries after
// m_last_source + 1 are all zero
BOOST_TEST(g.m_rowstart[0] == 0);
for (size_t i = 0; i < g.m_rowstart.size() - 1; ++i)
{
BOOST_TEST(g.m_rowstart[i + 1] >= g.m_rowstart[i]);
BOOST_TEST(g.m_rowstart[i + 1] <= g.m_rowstart.back());
}
// Check that m_column entries are within range
for (size_t i = 0; i < g.m_rowstart.back(); ++i)
{
BOOST_TEST(g.m_column[i] < g.m_rowstart.size() - 1);
}
}
template < typename Graph >
void check_consistency_dispatch(const Graph& g, boost::incidence_graph_tag)
{
check_consistency_one(g.m_forward);
}
template < class G > void assert_bidir_equal_in_both_dirs(const G& g)
{
BOOST_TEST(
g.m_forward.m_rowstart.size() == g.m_backward.m_rowstart.size());
BOOST_TEST(g.m_forward.m_column.size() == g.m_backward.m_column.size());
typedef typename boost::graph_traits< G >::vertex_descriptor Vertex;
typedef typename boost::graph_traits< G >::edges_size_type EdgeIndex;
std::vector< boost::tuple< EdgeIndex, Vertex, Vertex > > edges_forward,
edges_backward;
for (Vertex i = 0; i < g.m_forward.m_rowstart.size() - 1; ++i)
{
for (EdgeIndex j = g.m_forward.m_rowstart[i];
j < g.m_forward.m_rowstart[i + 1]; ++j)
{
edges_forward.push_back(
boost::make_tuple(j, i, g.m_forward.m_column[j]));
}
}
for (Vertex i = 0; i < g.m_backward.m_rowstart.size() - 1; ++i)
{
for (EdgeIndex j = g.m_backward.m_rowstart[i];
j < g.m_backward.m_rowstart[i + 1]; ++j)
{
edges_backward.push_back(
boost::make_tuple(g.m_backward.m_edge_properties[j],
g.m_backward.m_column[j], i));
}
}
std::sort(edges_forward.begin(), edges_forward.end());
std::sort(edges_backward.begin(), edges_backward.end());
BOOST_TEST(edges_forward == edges_backward);
}
template < typename Graph >
void check_consistency_dispatch(const Graph& g, boost::bidirectional_graph_tag)
{
check_consistency_one(g.m_forward);
check_consistency_one(g.m_backward);
assert_bidir_equal_in_both_dirs(g);
}
template < typename Graph > void check_consistency(const Graph& g)
{
check_consistency_dispatch(
g, typename boost::graph_traits< Graph >::traversal_category());
}
template < typename OrigGraph > void graph_test(const OrigGraph& g)
{
// Check copying of a graph
CSRGraphT g2(g);
check_consistency(g2);
BOOST_TEST((std::size_t)std::distance(edges(g2).first, edges(g2).second)
== num_edges(g2));
assert_graphs_equal(g, boost::identity_property_map(), g2,
boost::identity_property_map(), boost::identity_property_map());
// Check constructing a graph from iterators
CSRGraphT g3(boost::edges_are_sorted,
boost::make_transform_iterator(
edges(g2).first, boost::detail::make_edge_to_index_pair(g2)),
boost::make_transform_iterator(
edges(g2).second, boost::detail::make_edge_to_index_pair(g2)),
num_vertices(g));
check_consistency(g3);
BOOST_TEST((std::size_t)std::distance(edges(g3).first, edges(g3).second)
== num_edges(g3));
assert_graphs_equal(g2, boost::identity_property_map(), g3,
boost::identity_property_map(), boost::identity_property_map());
// Check constructing a graph using in-place modification of vectors
{
std::vector< std::size_t > sources(num_edges(g2));
std::vector< std::size_t > targets(num_edges(g2));
std::size_t idx = 0;
// Edges actually sorted
BGL_FORALL_EDGES(e, g2, CSRGraphT)
{
sources[idx] = source(e, g2);
targets[idx] = target(e, g2);
++idx;
}
CSRGraphT g3a(boost::construct_inplace_from_sources_and_targets,
sources, targets, num_vertices(g2));
check_consistency(g3a);
assert_graphs_equal(g2, boost::identity_property_map(), g3a,
boost::identity_property_map(), boost::identity_property_map());
}
{
std::vector< std::size_t > sources(num_edges(g2));
std::vector< std::size_t > targets(num_edges(g2));
std::size_t idx = 0;
// Edges reverse-sorted
BGL_FORALL_EDGES(e, g2, CSRGraphT)
{
sources[num_edges(g2) - 1 - idx] = source(e, g2);
targets[num_edges(g2) - 1 - idx] = target(e, g2);
++idx;
}
CSRGraphT g3a(boost::construct_inplace_from_sources_and_targets,
sources, targets, num_vertices(g2));
check_consistency(g3a);
assert_graphs_equal(g2, boost::identity_property_map(), g3a,
boost::identity_property_map(), boost::identity_property_map());
}
{
std::vector< std::size_t > sources(num_edges(g2));
std::vector< std::size_t > targets(num_edges(g2));
std::size_t idx = 0;
// Edges scrambled using Fisher-Yates shuffle (Durstenfeld variant) from
// Wikipedia
BGL_FORALL_EDGES(e, g2, CSRGraphT)
{
sources[idx] = source(e, g2);
targets[idx] = target(e, g2);
++idx;
}
boost::minstd_rand gen(1);
if (num_edges(g) != 0)
{
for (std::size_t i = num_edges(g) - 1; i > 0; --i)
{
std::size_t scrambled = boost::uniform_int<>(0, i)(gen);
if (scrambled == i)
continue;
using std::swap;
swap(sources[i], sources[scrambled]);
swap(targets[i], targets[scrambled]);
}
}
CSRGraphT g3a(boost::construct_inplace_from_sources_and_targets,
sources, targets, num_vertices(g2));
check_consistency(g3a);
assert_graphs_equal(g2, boost::identity_property_map(), g3a,
boost::identity_property_map(), boost::identity_property_map());
}
CSRGraphT::edge_iterator ei, ei_end;
// Check edge_from_index (and implicitly the edge_index property map) for
// each edge in g2
std::size_t last_src = 0;
for (boost::tie(ei, ei_end) = edges(g2); ei != ei_end; ++ei)
{
BOOST_TEST(
edge_from_index(get(boost::edge_index, g2, *ei), g2) == *ei);
std::size_t src = get(boost::vertex_index, g2, source(*ei, g2));
(void)(std::size_t) get(boost::vertex_index, g2, target(*ei, g2));
BOOST_TEST(src >= last_src);
last_src = src;
}
// Check out edge iteration and vertex iteration for sortedness
CSRGraphT::vertex_iterator vi, vi_end;
std::size_t last_vertex = 0;
bool first_iter = true;
for (boost::tie(vi, vi_end) = vertices(g2); vi != vi_end; ++vi)
{
std::size_t v = get(boost::vertex_index, g2, *vi);
BOOST_TEST(first_iter || v > last_vertex);
last_vertex = v;
first_iter = false;
CSRGraphT::out_edge_iterator oei, oei_end;
for (boost::tie(oei, oei_end) = out_edges(*vi, g2); oei != oei_end;
++oei)
{
BOOST_TEST(source(*oei, g2) == *vi);
}
// Find a vertex for testing
CSRGraphT::vertex_descriptor test_vertex
= vertex(num_vertices(g2) / 2, g2);
int edge_count = 0;
CSRGraphT::out_edge_iterator oei2, oei2_end;
for (boost::tie(oei2, oei_end) = out_edges(*vi, g2); oei2 != oei_end;
++oei2)
{
if (target(*oei2, g2) == test_vertex)
++edge_count;
}
}
// Run brandes_betweenness_centrality, which touches on a whole lot
// of things, including VertexListGraph and IncidenceGraph
using namespace boost;
std::vector< double > vertex_centralities(num_vertices(g3));
std::vector< double > edge_centralities(num_edges(g3));
brandes_betweenness_centrality(g3,
make_iterator_property_map(
vertex_centralities.begin(), get(boost::vertex_index, g3)),
make_iterator_property_map(
edge_centralities.begin(), get(boost::edge_index, g3)));
// Extra qualifications for aCC
// Invert the edge centralities and use these as weights to
// Kruskal's MST algorithm, which will test the EdgeListGraph
// capabilities.
double max_val = (std::numeric_limits< double >::max)();
for (std::size_t i = 0; i < num_edges(g3); ++i)
edge_centralities[i] = edge_centralities[i] == 0.0
? max_val
: 1.0 / edge_centralities[i];
typedef boost::graph_traits< CSRGraphT >::edge_descriptor edge_descriptor;
std::vector< edge_descriptor > mst_edges;
mst_edges.reserve(num_vertices(g3));
kruskal_minimum_spanning_tree(g3, std::back_inserter(mst_edges),
weight_map(make_iterator_property_map(
edge_centralities.begin(), get(boost::edge_index, g3))));
}
void graph_test(int nnodes, double density, int seed)
{
boost::minstd_rand gen(seed);
std::cout << "Testing " << nnodes << " density " << density << std::endl;
GraphT g(ERGen(gen, nnodes, density), ERGen(), nnodes);
graph_test(g);
}
void test_graph_properties()
{
using namespace boost;
typedef compressed_sparse_row_graph< directedS, no_property, no_property,
property< graph_name_t, std::string > >
CSRGraphT;
CSRGraphT g;
BOOST_TEST(get_property(g, graph_name) == "");
set_property(g, graph_name, "beep");
BOOST_TEST(get_property(g, graph_name) == "beep");
}
struct Vertex
{
double centrality;
};
struct Edge
{
Edge(double weight) : weight(weight), centrality(0.0) {}
double weight;
double centrality;
};
void test_vertex_and_edge_properties()
{
using namespace boost;
typedef compressed_sparse_row_graph< directedS, Vertex, Edge >
CSRGraphWithPropsT;
typedef std::pair< int, int > E;
E edges_init[6] = { E(0, 1), E(0, 3), E(1, 2), E(3, 1), E(3, 4), E(4, 2) };
double weights[6] = { 1.0, 1.0, 0.5, 1.0, 1.0, 0.5 };
double centrality[5] = { 0.0, 1.5, 0.0, 1.0, 0.5 };
CSRGraphWithPropsT g(boost::edges_are_sorted, &edges_init[0],
&edges_init[0] + 6, &weights[0], 5, 6);
brandes_betweenness_centrality(g,
centrality_map(get(&Vertex::centrality, g))
.weight_map(get(&Edge::weight, g))
.edge_centrality_map(get(&Edge::centrality, g)));
BGL_FORALL_VERTICES(v, g, CSRGraphWithPropsT)
BOOST_TEST(g[v].centrality == centrality[v]);
}
int main(int argc, char* argv[])
{
// Optionally accept a seed value
int seed = int(std::time(0));
if (argc > 1)
seed = boost::lexical_cast< int >(argv[1]);
std::cout << "Seed = " << seed << std::endl;
{
std::cout << "Testing empty graph" << std::endl;
CSRGraphT g;
graph_test(g);
}
// graph_test(1000, 0.05, seed);
// graph_test(1000, 0.0, seed);
// graph_test(1000, 0.1, seed);
graph_test(1000, 0.001, seed);
graph_test(1000, 0.0005, seed);
test_graph_properties();
test_vertex_and_edge_properties();
{
std::cout << "Testing CSR graph built from unsorted edges" << std::endl;
std::pair< int, int > unsorted_edges[] = { std::make_pair(5, 0),
std::make_pair(3, 2), std::make_pair(4, 1), std::make_pair(4, 0),
std::make_pair(0, 2), std::make_pair(5, 2) };
CSRGraphT g(boost::edges_are_unsorted, unsorted_edges,
unsorted_edges + sizeof(unsorted_edges) / sizeof(*unsorted_edges),
6);
// Test vertex and edge bundle access
boost::ignore_unused_variable_warning(
(VertexData&)get(get(boost::vertex_bundle, g), vertex(0, g)));
boost::ignore_unused_variable_warning((const VertexData&)get(
get(boost::vertex_bundle, (const CSRGraphT&)g), vertex(0, g)));
boost::ignore_unused_variable_warning(
(VertexData&)get(boost::vertex_bundle, g, vertex(0, g)));
boost::ignore_unused_variable_warning((const VertexData&)get(
boost::vertex_bundle, (const CSRGraphT&)g, vertex(0, g)));
put(boost::vertex_bundle, g, vertex(0, g), VertexData());
boost::ignore_unused_variable_warning(
(EdgeData&)get(get(boost::edge_bundle, g), *edges(g).first));
boost::ignore_unused_variable_warning((const EdgeData&)get(
get(boost::edge_bundle, (const CSRGraphT&)g), *edges(g).first));
boost::ignore_unused_variable_warning(
(EdgeData&)get(boost::edge_bundle, g, *edges(g).first));
boost::ignore_unused_variable_warning((const EdgeData&)get(
boost::edge_bundle, (const CSRGraphT&)g, *edges(g).first));
put(boost::edge_bundle, g, *edges(g).first, EdgeData());
CSRGraphT g2(boost::edges_are_unsorted_multi_pass, unsorted_edges,
unsorted_edges + sizeof(unsorted_edges) / sizeof(*unsorted_edges),
6);
graph_test(g);
graph_test(g2);
assert_graphs_equal(g, boost::identity_property_map(), g2,
boost::identity_property_map(), boost::identity_property_map());
std::cout << "Testing bidir CSR graph built from unsorted edges"
<< std::endl;
BidirCSRGraphT g2b(boost::edges_are_unsorted_multi_pass, unsorted_edges,
unsorted_edges + sizeof(unsorted_edges) / sizeof(*unsorted_edges),
6);
graph_test(g2b);
assert_graphs_equal(g, boost::identity_property_map(), g2b,
boost::identity_property_map(), boost::identity_property_map());
// Check in edge access
typedef boost::graph_traits< BidirCSRGraphT >::in_edge_iterator
in_edge_iterator;
std::pair< in_edge_iterator, in_edge_iterator > ie(
in_edges(vertex(0, g2b), g2b));
// quiet unused variable warning
ie.first = ie.second;
std::cout << "Testing CSR graph built using add_edges" << std::endl;
// Test building a graph using add_edges on unsorted lists
CSRGraphT g3(boost::edges_are_unsorted, unsorted_edges, unsorted_edges,
6); // Empty range
add_edges(unsorted_edges, unsorted_edges + 3, g3);
EdgeData edge_data[3];
add_edges(unsorted_edges + 3, unsorted_edges + 6, edge_data,
edge_data + 3, g3);
graph_test(g3);
assert_graphs_equal(g, boost::identity_property_map(), g3,
boost::identity_property_map(), boost::identity_property_map());
}
return boost::report_errors();
}
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