package info (click to toggle)
bowtie 1.2.3+dfsg-4
  • links: PTS, VCS
  • area: main
  • in suites: bullseye, sid
  • size: 16,888 kB
  • sloc: cpp: 35,784; perl: 5,903; ansic: 1,247; sh: 1,180; python: 487; makefile: 426

Folder: scripts

d .. (parent)
d d rwxr-xr-x 4,096 test
- - rwxr-xr-x 5,253 best_verify.pl
- - rwxr-xr-x 1,495 bowtie-hbb.sh
- - rwxr-xr-x 6,996 bs_mapability.pl
- - rwxr-xr-x 264 build_test.sh
- - rwxr-xr-x 1,162 colorize_fasta.pl
- - rwxr-xr-x 1,206 colorize_fastq.pl
- - rwxr-xr-x 2,662 convert_quals.pl
- - rwxr-xr-x 2,558 fastq_to_tabbed.pl
- - rwxr-xr-x 2,322 gen_2b_occ_lookup.pl
- - rwxr-xr-x 820 gen_dnamasks2colormask.pl
- - rwxr-xr-x 5,956 gen_occ_lookup.pl
- - rwxr-xr-x 1,352 gen_solqual_lookup.pl
- - rwxr-xr-x 3,109 infer_fraglen.pl
- - rwxr-xr-x 1,183 make_a_thaliana_tair.sh
- - rwxr-xr-x 1,462 make_b_taurus_UMD3.sh
- - rwxr-xr-x 1,074 make_c_elegans.sh
- - rwxr-xr-x 1,318 make_canFam2.sh
- - rwxr-xr-x 1,120 make_d_melanogaster.sh
- - rwxr-xr-x 1,095 make_e_coli.sh
- - rwxr-xr-x 1,897 make_galGal3.sh
- - rwxr-xr-x 2,454 make_h_sapiens_ncbi36.sh
- - rwxr-xr-x 2,166 make_h_sapiens_ncbi37.sh
- - rwxr-xr-x 2,232 make_hg18.sh
- - rwxr-xr-x 3,170 make_hg19.sh
- - rwxr-xr-x 1,630 make_m_musculus_ncbi37.sh
- - rwxr-xr-x 1,903 make_mm8.sh
- - rwxr-xr-x 1,913 make_mm9.sh
- - rwxr-xr-x 2,035 make_rn4.sh
- - rwxr-xr-x 1,127 make_s_cerevisiae.sh
- - rwxr-xr-x 4,751 mapability.pl
- - rwxr-xr-x 10,947 pe_verify.pl
- - rwxr-xr-x 9,713 reconcile_alignments.pl
- - rwxr-xr-x 15,493 reconcile_alignments_pe.pl
- - rwxr-xr-x 167 run-hbb.sh