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Document: bowtie2
Title: Manual for bowtie2
Author: Ben Langmead
Abstract: ultrafast memory-efficient short read aligner
is an ultrafast and memory-efficient tool for aligning sequencing reads to
long reference sequences. It is particularly good at aligning reads of about
50 up to 100s or 1,000s of characters, and particularly good at aligning to
relatively long (e.g. mammalian) genomes. Bowtie 2 indexes the genome with
an FM Index to keep its memory footprint small: for the human genome,
its memory footprint is typically around 3.2 GB.
Bowtie 2 supports gapped, local, and paired-end alignment modes.
Section: Science/Biology
Format: html
Files: /usr/share/doc/bowtie2/manual.html
Index: /usr/share/doc/bowtie2/manual.html
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