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bowtie2 2.5.4-1
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 27,492 kB
  • sloc: cpp: 63,838; perl: 7,232; sh: 1,131; python: 987; makefile: 541; ansic: 122

Folder: scripts

d .. (parent)
d d rwxr-xr-x 4,096 sim
d d rwxr-xr-x 4,096 test
- - rwxr-xr-x 1,462 bowtie2-hbb.sh
- - rwxr-xr-x 3,378 convert_quals.pl
- - rwxr-xr-x 3,038 gen_2b_occ_lookup.pl
- - rwxr-xr-x 6,672 gen_occ_lookup.pl
- - rwxr-xr-x 2,068 gen_solqual_lookup.pl
- - rwxr-xr-x 4,107 infer_fraglen.pl
- - rwxr-xr-x 1,192 make_a_thaliana_tair.sh
- - rwxr-xr-x 1,466 make_b_taurus_UMD3.sh
- - rwxr-xr-x 1,101 make_c_elegans.sh
- - rwxr-xr-x 1,322 make_canFam2.sh
- - rwxr-xr-x 1,313 make_d_melanogaster.sh
- - rwxr-xr-x 1,099 make_e_coli.sh
- - rwxr-xr-x 2,458 make_h_sapiens_ncbi36.sh
- - rwxr-xr-x 3,517 make_h_sapiens_ncbi37.sh
- - rwxr-xr-x 2,188 make_hg18.sh
- - rwxr-xr-x 3,127 make_hg19.sh
- - rwxr-xr-x 1,634 make_m_musculus_ncbi37.sh
- - rwxr-xr-x 2,596 make_mm10.sh
- - rwxr-xr-x 1,895 make_mm9.sh
- - rwxr-xr-x 1,978 make_rn4.sh
- - rwxr-xr-x 1,131 make_s_cerevisiae.sh
- - rwxr-xr-x 2,146 sa.py