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Source: bppsuite
Section: science
Priority: optional
Maintainer: Loic Dachary <loic@dachary.org>
Uploaders: Julien Dutheil <julien.dutheil@univ-montp2.fr>
Build-Depends: debhelper (>= 5), cmake (>= 2.6), dpkg (>= 1.15.4) | install-info, texinfo,
libbpp-phyl-dev (>= 2.2.0)
Standards-Version: 3.9.4
Package: bppsuite
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}
Description: Bio++ program suite
Includes programs:
- BppML for maximum likelihood analysis,
- BppSeqGen for sequences simulation,
- BppAncestor for ancestral states reconstruction,
- BppDist for distance methods,
- BppPars for parsimony analysis,
- BppSeqMan for file conversion and sequence manipulation,
- BppConsense for building consensus tree and computing bootstrap values,
- BppPhySamp for phylogenetic sampling,
- BppReRoot for tree rerooting.
- BppTreeDraw for tree drawing.
- BppAlnScore for comparing alignments and computing alignment scores.
- BppMixedLikelihoods for computing site per site likelihoods of components of mixture models.
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