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#!/usr/bin/make -f
SHELL=bash # needed for the <(echo …) process subsitution temporary file
include /usr/share/dpkg/default.mk
export DEB_BUILD_MAINT_OPTIONS = hardening=+all
ifeq (,$(filter $(DEB_HOST_ARCH),amd64 i386))
export DEB_CFLAGS_MAINT_APPEND+=-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3
export DEB_CXXFLAGS_MAINT_APPEND+=-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3
endif
%:
dh $@
override_dh_auto_build:
ifneq (,$(filter $(DEB_HOST_ARCH),amd64 i386))
dh_auto_build -- EXE=bwa-mem2.sse2 ARCH_FLAGS='-msse2'
dh_auto_build -- multi
else
dh_auto_build -- ARCH_FLAGS=' '
endif
help2man --no-discard-stderr --version-string="$(DEB_VERSION_UPSTREAM)" \
--help-option=' ' --no-info ./bwa-mem2 --name="Sequence alignment using Burrows-Wheeler Transform" \
> debian/bwa-mem2.1
help2man --no-discard-stderr --version-string="$(DEB_VERSION_UPSTREAM)" \
--help-option=' ' --no-info './bwa-mem2 mem' \
--include <(echo -e "[NAME]\nbwa-mem2_mem \- Sequence alignment using Burrows-Wheeler Transform") \
> debian/bwa-mem2-mem.1
# ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
# dh_auto_build --sourcedir=test -- CXX=g++
# endif
#
# override_dh_auto_test:
# ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
# cd test; for test in fmi_test smem2_test bwt_seed_strategy_test sa2ref_test xeonbsw; do ./$${test}; done
# endif
override_dh_auto_clean:
dh_auto_clean || true
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