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Source: bwa
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Charles Plessy <plessy@debian.org>,
Andreas Tille <tille@debian.org>,
Carlos Borroto <carlos.borroto@gmail.com>,
Ognyan Kulev <ogi@debian.org>,
Michael R. Crusoe <crusoe@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13),
zlib1g-dev,
libsimde-dev
Standards-Version: 4.5.1
Vcs-Browser: https://salsa.debian.org/med-team/bwa
Vcs-Git: https://salsa.debian.org/med-team/bwa.git
Homepage: http://bio-bwa.sourceforge.net/
Rules-Requires-Root: no
Package: bwa
Architecture: any
Built-Using: ${simde:Built-Using}
Depends: ${shlibs:Depends},
${misc:Depends}
Recommends: perl
Suggests: samtools
Description: Burrows-Wheeler Aligner
BWA is a software package for mapping low-divergent sequences against
a large reference genome, such as the human genome. It consists of
three algorithms: BWA-backtrack, BWA-SW and BWA-MEM. The first
algorithm is designed for Illumina sequence reads up to 100bp, while
the rest two for longer sequences ranged from 70bp to 1Mbp. BWA-MEM
and BWA-SW share similar features such as long-read support and split
alignment, but BWA-MEM, which is the latest, is generally recommended
for high-quality queries as it is faster and more accurate. BWA-MEM
also has better performance than BWA-backtrack for 70-100bp Illumina
reads.
Package: libbwa-dev
Built-Using: ${simde:Built-Using}
Architecture: any
Section: libdevel
Depends: ${misc:Depends}
Suggests: samtools
Description: Burrows-Wheeler Aligner source files
BWA is a software package for mapping low-divergent sequences against
a large reference genome, such as the human genome. It consists of
three algorithms: BWA-backtrack, BWA-SW and BWA-MEM. The first
algorithm is designed for Illumina sequence reads up to 100bp, while
the rest two for longer sequences ranged from 70bp to 1Mbp. BWA-MEM
and BWA-SW share similar features such as long-read support and split
alignment, but BWA-MEM, which is the latest, is generally recommended
for high-quality queries as it is faster and more accurate. BWA-MEM
also has better performance than BWA-backtrack for 70-100bp Illumina
reads.
.
This package contains the source files for use in other programs.
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