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Source: caftools
Section: non-free/science
Priority: optional
Maintainer: Steffen Moeller <moeller@debian.org>
Build-Depends: debhelper (>= 11), autotools-dev
Standards-Version: 4.5.0
Homepage: https://www.sanger.ac.uk/science/tools/caf
Vcs-Browser: https://salsa.debian.org/med-team/caftools
Vcs-Git: https://salsa.debian.org/med-team/caftools.git
Rules-Requires-Root: no
Package: caftools
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}
Suggests: staden
Description: maintenance of DNA sequence assemblies
This package contains code from different authors that allow sequence
assemblies to be converted into formats such as CAF (Common Assembly
Format) or GAP4.
.
CAF is a text format for describing sequence assemblies. It
is acedb-compliant and is an extension of the ace-file format used
earlier, but with support for base quality measures and a more extensive
description of the Sequence data. CAF was designed during the Sanger
sequencing era. Its modern-day successor is the SAM format, or its
binary equivalents BAM and CRAM.
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