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/*****************************************************************************
* $CAMITK_LICENCE_BEGIN$
*
* CamiTK - Computer Assisted Medical Intervention ToolKit
* (c) 2001-2018 Univ. Grenoble Alpes, CNRS, TIMC-IMAG UMR 5525 (GMCAO)
*
* Visit http://camitk.imag.fr for more information
*
* This file is part of CamiTK.
*
* CamiTK is free software: you can redistribute it and/or modify
* it under the terms of the GNU Lesser General Public License version 3
* only, as published by the Free Software Foundation.
*
* CamiTK is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Lesser General Public License version 3 for more details.
*
* You should have received a copy of the GNU Lesser General Public License
* version 3 along with CamiTK. If not, see <http://www.gnu.org/licenses/>.
*
* $CAMITK_LICENCE_END$
****************************************************************************/
// Monitor includes
#include "MonitorPointFinalSetDistance.h"
// Tools includes
#include "Tools.h"
#include "AtomIterator.h"
// -------------------- constructor --------------------
MonitorPointFinalSetDistance::MonitorPointFinalSetDistance(mml::Monitor* m, MonitoringManager* monitoringManager): Monitor(m, monitoringManager, SCALARSET) {}
// -------------------- destructor --------------------
void MonitorPointFinalSetDistance::calculate() {
values.clear();
double posSimul[3];
double posRef[3];
AtomIterator it = AtomIterator(monitoringManager->getPml(), target);
for (it.begin(); !it.end(); it.next()) {
it.currentAtom()->getPosition(posSimul);
posSimul[0] = posSimul[0] + dx;
posSimul[1] = posSimul[1] + dy;
posSimul[2] = posSimul[2] + dz;
if (references[0]->getNearest(posSimul, posRef)) {
values.push_back(distance(posRef, posSimul));
}
else {
std::cerr << "not atoms found to calculate the nearest" << std::endl;
}
}
write();
}
// -------------------- destructor --------------------
std::string MonitorPointFinalSetDistance::getTypeName() {
return "Point final set distance";
}
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