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canu 1.7.1+dfsg-1~bpo9+1
  • links: PTS, VCS
  • area: main
  • in suites: stretch-backports
  • size: 7,680 kB
  • sloc: cpp: 66,708; perl: 13,682; ansic: 4,020; makefile: 627; sh: 472; python: 39

Folder: overlapBasedTrimming

d .. (parent)
- - rw-r--r-- 4,711 adjustFlipped.C
- - rw-r--r-- 4,311 adjustNormal.C
- - rw-r--r-- 1,747 adjustOverlaps.H
- - rw-r--r-- 4,312 clearRangeFile.H
- - rw-r--r-- 2,948 detect-unsplit-subreads-in-overlaps.pl
- - rw-r--r-- 4,787 generate-random-chimeric-fragments.pl
- - rw-r--r-- 11,965 splitReads-subReads.C
- - rw-r--r-- 4,836 splitReads-trimBad.C
- - rw-r--r-- 5,037 splitReads-workUnit.C
- - rw-r--r-- 18,382 splitReads.C
- - rw-r--r-- 5,776 splitReads.H
- - rw-r--r-- 645 splitReads.mk
- - rw-r--r-- 3,849 test-random-chimeric-fragments.pl
- - rw-r--r-- 11,164 trimReads-bestEdge.C
- - rw-r--r-- 6,682 trimReads-largestCovered.C
- - rw-r--r-- 6,353 trimReads-quality.C
- - rw-r--r-- 16,899 trimReads.C
- - rw-r--r-- 2,502 trimReads.H
- - rw-r--r-- 587 trimReads.mk
- - rw-r--r-- 2,659 trimStat.H