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generateCorrectionLayouts
~~~~~~
::
usage: generateCorrectionLayouts -G gkpStore -O ovlStore [ -T tigStore | -F ] ...
-G gkpStore mandatory path to gkpStore
-O ovlStore mandatory path to ovlStore
-S file global score (binary) input file
-T corStore output layouts to tigStore corStore
-F output falconsense-style input directly to stdout
-p name output prefix name, for logging and summary
-b bgnID
-e endID
-rl file
-L length minimum length of evidence overlaps
-E erate maxerror rate of evidence overlaps
-C coverage maximum coverage of evidence reads to emit
-M length minimum length of a corrected read
ERROR: no gkpStore input (-G) supplied.
ERROR: no ovlStore input (-O) supplied.
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