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readConsensus
~~~~~~
::
usage: readConsensus ...
-G gkpStore Mandatory, path to gkpStore
Inputs can come from either an overlap or a tig store.
-O ovlStore
-T tigStore tigVers
If from an ovlStore, the range of reads processed can be restricted.
-b bgnID
-e endID
Outputs will be written as the full multialignment and the final consensus sequence
-c output.cns
-f output.fastq
-erate e Overlaps are computed at 'e' fraction error; must be larger than the original erate
-memory m Use up to 'm' GB of memory
-t n Use up to 'n' cores
ERROR: no gatekeeper (-G) supplied.
ERROR: no inputs (-O or -T) supplied.
ERROR: no outputs (-c or -f) supplied.
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