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/*LICENSE_START*/
/*
* Copyright 1995-2002 Washington University School of Medicine
*
* http://brainmap.wustl.edu
*
* This file is part of CARET.
*
* CARET is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 2 of the License, or
* (at your option) any later version.
*
* CARET is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with CARET; if not, write to the Free Software
* Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
*
*/
/*LICENSE_END*/
#include "CommandDeformationMapPathUpdate.h"
#include "DeformationMapFile.h"
#include "FileFilters.h"
#include "ProgramParameters.h"
#include "ScriptBuilderParameters.h"
/**
* constructor.
*/
CommandDeformationMapPathUpdate::CommandDeformationMapPathUpdate()
: CommandBase("-deformation-map-path",
"DEFORMATION MAP FILE SOURCE/TARGET PATH UPDATE")
{
}
/**
* destructor.
*/
CommandDeformationMapPathUpdate::~CommandDeformationMapPathUpdate()
{
}
/**
* get the script builder parameters.
*/
void
CommandDeformationMapPathUpdate::getScriptBuilderParameters(ScriptBuilderParameters& paramsOut) const
{
paramsOut.clear();
paramsOut.addFile("Deformation Map File Name",
FileFilters::getDeformationMapFileFilter());
paramsOut.addDirectory("Source Path");
paramsOut.addDirectory("Target Path");
}
/**
* get full help information.
*/
QString
CommandDeformationMapPathUpdate::getHelpInformation() const
{
QString helpInfo =
(indent3 + getShortDescription() + "\n"
+ indent6 + parameters->getProgramNameWithoutPath() + " " + getOperationSwitch() + " \n"
+ indent9 + "<deformation-map-file-name> \n"
+ indent9 + "<new-source-path> \n"
+ indent9 + "<new-target-path> \n"
+ indent9 + "\n"
+ indent9 + "Update the source (individual) and target (atlas) paths\n"
+ indent9 + "in a deformation map file.\n"
+ indent9 + "\n");
return helpInfo;
}
/**
* execute the command.
*/
void
CommandDeformationMapPathUpdate::executeCommand() throw (BrainModelAlgorithmException,
CommandException,
FileException,
ProgramParametersException,
StatisticException)
{
//
// Get the parameters
//
const QString defMapFileName =
parameters->getNextParameterAsString("Deformation Map File");
const QString sourcePath =
parameters->getNextParameterAsString("Source Path");
const QString targetPath =
parameters->getNextParameterAsString("Target Path");
//
// Make sure that are no more parameters
//
checkForExcessiveParameters();
DeformationMapFile defMapFile;
defMapFile.readFile(defMapFileName);
defMapFile.setSourceDirectory(sourcePath);
defMapFile.setTargetDirectory(targetPath);
defMapFile.writeFile(defMapFileName);
}
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