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/*LICENSE_START*/
/*
* Copyright 1995-2002 Washington University School of Medicine
*
* http://brainmap.wustl.edu
*
* This file is part of CARET.
*
* CARET is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 2 of the License, or
* (at your option) any later version.
*
* CARET is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with CARET; if not, write to the Free Software
* Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
*
*/
/*LICENSE_END*/
#include "CommandPaintComposite.h"
#include "FileFilters.h"
#include "PaintFile.h"
#include "ProgramParameters.h"
/**
* constructor.
*/
CommandPaintComposite::CommandPaintComposite()
: CommandBase("-paint-composite",
"PAINT FILE COMPOSITE ALL COLUMNS")
{
}
/**
* destructor.
*/
CommandPaintComposite::~CommandPaintComposite()
{
}
/**
* get the script builder parameters.
*/
void
CommandPaintComposite::getScriptBuilderParameters(ScriptBuilderParameters& paramsOut) const
{
paramsOut.clear();
paramsOut.clear();
paramsOut.addFile("Output Paint File Name",
FileFilters::getPaintFileFilter());
paramsOut.addMultipleFiles("Input Paint File Name(s)",
FileFilters::getMetricFileFilter());
}
/**
* get full help information.
*/
QString
CommandPaintComposite::getHelpInformation() const
{
QString helpInfo =
(indent3 + getShortDescription() + "\n"
+ indent6 + parameters->getProgramNameWithoutPath() + " " + getOperationSwitch() + " \n"
+ indent9 + "<output-paint-file> \n"
+ indent9 + "<input-paint-files...>\n"
+ indent9 + "\n"
+ indent9 + "Concatenate all columns from the input paint files and place\n"
+ indent9 + "them into the output paint file\n");
return helpInfo;
}
/**
* execute the command.
*/
void
CommandPaintComposite::executeCommand() throw (BrainModelAlgorithmException,
CommandException,
FileException,
ProgramParametersException,
StatisticException)
{
//
// Get the parameters
//
const QString outputPaintFileName =
parameters->getNextParameterAsString("Output Paint File Name");
std::vector<QString> inputPaintFileNames;
parameters->getRemainingParametersAsStrings("Input Paint Files",
inputPaintFileNames);
const int numPaintFiles = static_cast<int>(inputPaintFileNames.size());
if (numPaintFiles <= 0) {
throw CommandException("Names of input paint files are missing.");
}
PaintFile outputPaintFile;
for (int i = 0; i < numPaintFiles; i++) {
if (outputPaintFile.getNumberOfColumns() == 0) {
outputPaintFile.readFile(inputPaintFileNames[i]);
}
else {
PaintFile inputPaintFile;
inputPaintFile.readFile(inputPaintFileNames[i]);
const int numCols = inputPaintFile.getNumberOfColumns();
if (numCols > 0) {
outputPaintFile.append(inputPaintFile);
}
}
}
outputPaintFile.writeFile(outputPaintFileName);
}
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