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/*LICENSE_START*/
/*
* Copyright 1995-2002 Washington University School of Medicine
*
* http://brainmap.wustl.edu
*
* This file is part of CARET.
*
* CARET is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 2 of the License, or
* (at your option) any later version.
*
* CARET is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with CARET; if not, write to the Free Software
* Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
*
*/
/*LICENSE_END*/
#include "CommandVolumeMakeRectangle.h"
#include "FileFilters.h"
#include "ProgramParameters.h"
#include "ScriptBuilderParameters.h"
#include "VolumeFile.h"
/**
* constructor.
*/
CommandVolumeMakeRectangle::CommandVolumeMakeRectangle()
: CommandBase("-volume-make-rectangle",
"VOLUME MAKE RECTANGLE")
{
}
/**
* destructor.
*/
CommandVolumeMakeRectangle::~CommandVolumeMakeRectangle()
{
}
/**
* get the script builder parameters.
*/
void
CommandVolumeMakeRectangle::getScriptBuilderParameters(ScriptBuilderParameters& paramsOut) const
{
paramsOut.clear();
paramsOut.addFile("Input Volume File Name", FileFilters::getVolumeGenericFileFilter());
paramsOut.addFile("Output Volume File Name", FileFilters::getVolumeGenericFileFilter());
paramsOut.addInt("i-minimum");
paramsOut.addInt("i-maximum");
paramsOut.addInt("j-minimum");
paramsOut.addInt("j-maximum");
paramsOut.addInt("k-minimum");
paramsOut.addInt("k-maximum");
paramsOut.addFloat("Voxel Value");
}
/**
* get full help information.
*/
QString
CommandVolumeMakeRectangle::getHelpInformation() const
{
QString helpInfo =
(indent3 + getShortDescription() + "\n"
+ indent6 + parameters->getProgramNameWithoutPath() + " " + getOperationSwitch() + " \n"
+ indent9 + "<input-volume-file-name>\n"
+ indent9 + "<output-volume-file-name>\n"
+ indent9 + "<i-minimum>\n"
+ indent9 + "<i-maximum>\n"
+ indent9 + "<j-minimum>\n"
+ indent9 + "<j-maximum>\n"
+ indent9 + "<k-minimum>\n"
+ indent9 + "<k-maximum>\n"
+ indent9 + "<voxel-value>\n"
+ indent9 + "\n"
+ indent9 + "Set the voxels within the range [i-min, i-max),\n"
+ indent9 + "[j-min, j-max), [k-min, k-max) to the specified value.\n"
+ indent9 + "\n");
return helpInfo;
}
/**
* execute the command.
*/
void
CommandVolumeMakeRectangle::executeCommand() throw (BrainModelAlgorithmException,
CommandException,
FileException,
ProgramParametersException,
StatisticException)
{
const QString inputVolumeFileName =
parameters->getNextParameterAsString("Input Volume File Name");
QString outputVolumeFileName, outputVolumeFileLabel;
parameters->getNextParameterAsVolumeFileNameAndLabel("Output Volume File Name/Label",
outputVolumeFileName,
outputVolumeFileLabel);
const int extent[6] = {
parameters->getNextParameterAsInt("i-minimum"),
parameters->getNextParameterAsInt("i-maximum"),
parameters->getNextParameterAsInt("j-minimum"),
parameters->getNextParameterAsInt("j-maximum"),
parameters->getNextParameterAsInt("k-minimum"),
parameters->getNextParameterAsInt("k-maximum")
};
const float voxelValue =
parameters->getNextParameterAsFloat("Voxel Value"),
checkForExcessiveParameters();
//
// Read the input file
//
VolumeFile volume;
volume.readFile(inputVolumeFileName);
//
// make rectangle
//
volume.setAllVoxelsInRectangle(extent, voxelValue);
//
// Write the volume
//
writeVolumeFile(volume, outputVolumeFileName, outputVolumeFileLabel);
}
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