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//# SSMColumn.cc: The Column of the Standard Storage Manager
//# Copyright (C) 2000,2001,2002
//# Associated Universities, Inc. Washington DC, USA.
//#
//# This library is free software; you can redistribute it and/or modify it
//# under the terms of the GNU Library General Public License as published by
//# the Free Software Foundation; either version 2 of the License, or (at your
//# option) any later version.
//#
//# This library is distributed in the hope that it will be useful, but WITHOUT
//# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
//# FITNESS FOR A PARTICULAR PURPOSE. See the GNU Library General Public
//# License for more details.
//#
//# You should have received a copy of the GNU Library General Public License
//# along with this library; if not, write to the Free Software Foundation,
//# Inc., 675 Massachusetts Ave, Cambridge, MA 02139, USA.
//#
//# Correspondence concerning AIPS++ should be addressed as follows:
//# Internet email: aips2-request@nrao.edu.
//# Postal address: AIPS++ Project Office
//# National Radio Astronomy Observatory
//# 520 Edgemont Road
//# Charlottesville, VA 22903-2475 USA
//#
//# $Id$
#include <casacore/tables/DataMan/SSMColumn.h>
#include <casacore/tables/DataMan/SSMBase.h>
#include <casacore/tables/DataMan/SSMStringHandler.h>
#include <casacore/tables/Tables/RefRows.h>
#include <casacore/casa/Arrays/Array.h>
#include <casacore/casa/Arrays/Vector.h>
#include <casacore/casa/Utilities/ValType.h>
#include <casacore/casa/Utilities/Assert.h>
#include <casacore/casa/Utilities/Copy.h>
#include <casacore/casa/BasicMath/Math.h>
#include <casacore/casa/OS/CanonicalConversion.h>
#include <casacore/casa/OS/LECanonicalConversion.h>
namespace casacore { //# NAMESPACE CASACORE - BEGIN
SSMColumn::SSMColumn (SSMBase* aParent, int aDataType, uInt aColNr)
: StManColumnBase(aDataType),
itsSSMPtr (aParent),
itsExternalSizeBytes(0),
itsExternalSizeBits (0),
itsColNr (aColNr),
itsMaxLen (0),
itsNrElem (1),
itsNrCopy (0),
itsData (0)
{
init();
}
SSMColumn::~SSMColumn()
{
delete [] static_cast<char*>(itsData);
}
void SSMColumn::setShapeColumn (const IPosition& aShape)
{
itsNrElem = aShape.product();
itsShape = aShape;
init();
}
void SSMColumn::setMaxLength (uInt maxLength)
{
itsMaxLen = maxLength;
init();
}
uInt SSMColumn::ndim (rownr_t)
{
return itsShape.nelements();
}
IPosition SSMColumn::shape (rownr_t)
{
return itsShape;
}
void SSMColumn::doCreate(rownr_t)
{
}
void SSMColumn::getFile(rownr_t)
{
}
void SSMColumn::addRow (rownr_t aNewNrRows, rownr_t, Bool doInit)
{
if (doInit && dataType() == TpString) {
rownr_t aRowNr=0;
rownr_t aNrRows=aNewNrRows;
while (aNrRows > 0) {
rownr_t aStartRow;
rownr_t anEndRow;
char* aValPtr;
aValPtr = itsSSMPtr->find (aRowNr, itsColNr, aStartRow, anEndRow,
columnName());
aRowNr = anEndRow+1;
rownr_t aNr = anEndRow-aStartRow+1;
aNrRows -= aNr;
memset(aValPtr, 0, aNr * itsExternalSizeBytes);
itsSSMPtr->setBucketDirty();
}
}
}
void SSMColumn::deleteRow(rownr_t aRowNr)
{
char* aValue;
rownr_t aSRow;
rownr_t anERow;
int aDT = dataType();
if (aDT == TpString && itsMaxLen == 0) {
Int buf[3];
getRowValue(buf, aRowNr);
if (buf[2] > 8 ) {
itsSSMPtr->getStringHandler()->remove(buf[0], buf[1], buf[2]);
aValue = itsSSMPtr->find (aRowNr, itsColNr, aSRow, anERow,
columnName());
shiftRows(aValue,aRowNr,aSRow,anERow);
itsSSMPtr->setBucketDirty();
return;
}
}
aValue = itsSSMPtr->find (aRowNr, itsColNr, aSRow, anERow, columnName());
// For bools be sure that cache is actual
Bool isBool = (aDT == TpBool);
if (isBool && aRowNr < anERow) {
Bool aVal;
getBool(aRowNr,&aVal);
}
// first check if aRowNr is in cache, if not, fill cache
// In both cases remove row from cache
rownr_t aStartRow = columnCache().start();
rownr_t anEndRow = columnCache().end();
// Remove from cache if needed
if (aRowNr >= aStartRow && aRowNr <= anEndRow) {
// remove the row in itsData if not last
if (aRowNr < anEndRow) {
char* aToPtr = getDataPtr() + (aRowNr-aStartRow) * itsLocalSize;
char* aFromPtr = getDataPtr() + (aRowNr+1-aStartRow) * itsLocalSize;
// decrement anEndrow
uInt64 aLength = (anEndRow - aRowNr) * itsLocalSize;
memmove(aToPtr,aFromPtr,aLength);
}
// Fill cache again with actual itsData.
if (aStartRow == anEndRow) {
columnCache().invalidate();
} else {
columnCache().set (aStartRow, anEndRow-1, getDataPtr());
}
}
if (aRowNr < anERow) {
// remove from bucket
// first check if type is a bool
if (isBool) {
itsWriteFunc (aValue,itsData, (anERow-aSRow) * itsNrCopy);
} else {
shiftRows(aValue,aRowNr,aSRow,anERow);
}
itsSSMPtr->setBucketDirty();
}
}
void SSMColumn::shiftRows(char* aValue, rownr_t aRowNr,
rownr_t aSRow, rownr_t anERow)
{
// Shift from aRrowNr on 1 to the left.
char* aToPtr = aValue + (aRowNr-aSRow) * itsExternalSizeBytes;
char* aFromPtr = aToPtr + itsExternalSizeBytes;
uInt64 aLength = (anERow - aRowNr) * itsExternalSizeBytes;
memmove(aToPtr,aFromPtr,aLength);
// Clear last entry (so a putString on a new row finds zeroes).
memset (aToPtr + aLength, 0, itsExternalSizeBytes);
}
void SSMColumn::getBool (rownr_t aRowNr, Bool* aValue)
{
getValue(aRowNr);
*aValue = static_cast<Bool*>(itsData)[aRowNr-columnCache().start()];
}
void SSMColumn::getuChar (rownr_t aRowNr, uChar* aValue)
{
getValue(aRowNr);
*aValue = static_cast<uChar*>(itsData)[aRowNr-columnCache().start()];
}
void SSMColumn::getShort (rownr_t aRowNr, Short* aValue)
{
getValue(aRowNr);
*aValue = static_cast<Short*>(itsData)[aRowNr-columnCache().start()];
}
void SSMColumn::getuShort (rownr_t aRowNr, uShort* aValue)
{
getValue(aRowNr);
*aValue = static_cast<uShort*>(itsData)[aRowNr-columnCache().start()];
}
void SSMColumn::getInt (rownr_t aRowNr, Int* aValue)
{
getValue(aRowNr);
*aValue = static_cast<Int*>(itsData)[aRowNr-columnCache().start()];
}
void SSMColumn::getuInt (rownr_t aRowNr, uInt* aValue)
{
getValue(aRowNr);
*aValue = static_cast<uInt*>(itsData)[aRowNr-columnCache().start()];
}
void SSMColumn::getInt64 (rownr_t aRowNr, Int64* aValue)
{
getValue(aRowNr);
*aValue = static_cast<Int64*>(itsData)[aRowNr-columnCache().start()];
}
void SSMColumn::getfloat (rownr_t aRowNr, float* aValue)
{
getValue(aRowNr);
*aValue = static_cast<float*>(itsData)[aRowNr-columnCache().start()];
}
void SSMColumn::getdouble (rownr_t aRowNr, double* aValue)
{
getValue(aRowNr);
*aValue = static_cast<double*>(itsData)[aRowNr-columnCache().start()];
}
void SSMColumn::getComplex (rownr_t aRowNr, Complex* aValue)
{
getValue(aRowNr);
*aValue = static_cast<Complex*>(itsData)[aRowNr-columnCache().start()];
}
void SSMColumn::getDComplex (rownr_t aRowNr,DComplex* aValue)
{
getValue(aRowNr);
*aValue = static_cast<DComplex*>(itsData)[aRowNr-columnCache().start()];
}
void SSMColumn::getString (rownr_t aRowNr, String* aValue)
{
if (itsMaxLen > 0) {
// Allocate the maximum number of characters needed
// The +1 is to correct for the incorrect use of the chars() function
// Should be changed to use real Char*
aValue->alloc(itsMaxLen+1);
char* sp = const_cast<char*>(aValue->chars());
rownr_t aStartRow;
rownr_t anEndRow;
char* buf = itsSSMPtr->find (aRowNr, itsColNr, aStartRow, anEndRow,
columnName());
itsReadFunc (sp, buf+(aRowNr-aStartRow)*itsExternalSizeBytes,
itsNrCopy);
// Append a trailing zero (in case needed).
// Note that if shorter, the string already contains a trailing zero.
// Set the string to its actual length.
sp[itsMaxLen] = '\0';
uInt len = 0;
while (*sp++ != '\0') {
len++;
}
aValue->alloc(len);
} else {
// The string is probably stored indirectly in a string bucket.
// Get bucketnr, offset, and length.
Int buf[3];
char* strbuf = getRowValue(buf, aRowNr);
// if length <= 8 chars the string can be found in de data bucket
// instead of the string bucket.
if (buf[2] <= 8) {
aValue->resize (buf[2]); // resize storage which adds trailing 0
char* sp = &((*aValue)[0]); // get actual string
memcpy (sp, strbuf, buf[2]);
#ifdef USE_OLD_STRING
sp[buf[2]] = '\0';
#endif
} else {
itsSSMPtr->getStringHandler()->get(*aValue, buf[0], buf[1], buf[2]);
}
}
}
Char* SSMColumn::getRowValue(Int* data, rownr_t aRowNr)
{
rownr_t aStartRow;
rownr_t anEndRow;
char* aValue;
aValue = itsSSMPtr->find (aRowNr, itsColNr, aStartRow, anEndRow,
columnName());
itsReadFunc (data, aValue+(aRowNr-aStartRow)*itsExternalSizeBytes,
itsNrCopy);
return aValue+(aRowNr-aStartRow)*itsExternalSizeBytes;
}
void SSMColumn::getValue(rownr_t aRowNr)
{
if (aRowNr < columnCache().start() || aRowNr > columnCache().end()) {
rownr_t aStartRow;
rownr_t anEndRow;
char* aValue;
aValue = itsSSMPtr->find (aRowNr, itsColNr, aStartRow, anEndRow,
columnName());
itsReadFunc (getDataPtr(), aValue, (anEndRow-aStartRow+1) * itsNrCopy);
columnCache().set (aStartRow, anEndRow, getDataPtr());
}
}
void SSMColumn::putBool (rownr_t aRowNr, const Bool* aValue)
{
rownr_t aStartRow;
rownr_t anEndRow;
char* aDummy;
aDummy = itsSSMPtr->find (aRowNr, itsColNr, aStartRow, anEndRow,
columnName());
uInt64 anOff = aRowNr-aStartRow;
Conversion::boolToBit(aDummy+(anOff/8),
aValue,anOff%8,1);
itsSSMPtr->setBucketDirty();
if (aRowNr >= columnCache().start() && aRowNr <= columnCache().end()) {
getDataPtr()[aRowNr-columnCache().start()] =
*aValue;
}
}
void SSMColumn::putuChar (rownr_t aRowNr, const uChar* aValue)
{
putValue(aRowNr,aValue);
if (aRowNr >= columnCache().start() && aRowNr <= columnCache().end()) {
static_cast<uChar*>(itsData)[aRowNr-columnCache().start()] =
*aValue;
}
}
void SSMColumn::putShort (rownr_t aRowNr, const Short* aValue)
{
putValue(aRowNr,aValue);
if (aRowNr >= columnCache().start() && aRowNr <= columnCache().end()) {
static_cast<Short*>(itsData)[aRowNr-columnCache().start()] =
*aValue;
}
}
void SSMColumn::putuShort (rownr_t aRowNr, const uShort* aValue)
{
putValue(aRowNr,aValue);
if (aRowNr >= columnCache().start() && aRowNr <= columnCache().end()) {
static_cast<uShort*>(itsData)[aRowNr-columnCache().start()] =
*aValue;
}
}
void SSMColumn::putInt (rownr_t aRowNr, const Int* aValue)
{
putValue(aRowNr,aValue);
if (aRowNr >= columnCache().start() && aRowNr <= columnCache().end()) {
static_cast<Int*>(itsData)[aRowNr-columnCache().start()] =
*aValue;
}
}
void SSMColumn::putuInt (rownr_t aRowNr, const uInt* aValue)
{
putValue(aRowNr,aValue);
if (aRowNr >= columnCache().start() && aRowNr <= columnCache().end()) {
static_cast<uInt*>(itsData)[aRowNr-columnCache().start()] =
*aValue;
}
}
void SSMColumn::putInt64 (rownr_t aRowNr, const Int64* aValue)
{
putValue(aRowNr,aValue);
if (aRowNr >= columnCache().start() && aRowNr <= columnCache().end()) {
static_cast<Int64*>(itsData)[aRowNr-columnCache().start()] =
*aValue;
}
}
void SSMColumn::putfloat (rownr_t aRowNr, const float* aValue)
{
putValue(aRowNr,aValue);
if (aRowNr >= columnCache().start() && aRowNr <= columnCache().end()) {
static_cast<float*>(itsData)[aRowNr-columnCache().start()] =
*aValue;
}
}
void SSMColumn::putdouble (rownr_t aRowNr, const double* aValue)
{
putValue(aRowNr,aValue);
if (aRowNr >= columnCache().start() && aRowNr <= columnCache().end()) {
static_cast<double*>(itsData)[aRowNr-columnCache().start()] =
*aValue;
}
}
void SSMColumn::putComplex (rownr_t aRowNr, const Complex* aValue)
{
putValue(aRowNr,aValue);
if (aRowNr >= columnCache().start() && aRowNr <= columnCache().end()) {
static_cast<Complex*>(itsData)[aRowNr-columnCache().start()] =
*aValue;
}
}
void SSMColumn::putDComplex (rownr_t aRowNr, const DComplex* aValue)
{
putValue(aRowNr,aValue);
if (aRowNr >= columnCache().start() && aRowNr <= columnCache().end()) {
static_cast<DComplex*>(itsData)[aRowNr-columnCache().start()] =
*aValue;
}
}
void SSMColumn::putString (rownr_t aRowNr, const String* aValue)
{
// Fixed length strings are written directly.
if (itsMaxLen > 0) {
rownr_t aStartRow;
rownr_t anEndRow;
char* aDummy = itsSSMPtr->find (aRowNr, itsColNr, aStartRow, anEndRow,
columnName());
itsWriteFunc (aDummy+(aRowNr-aStartRow)*itsExternalSizeBytes,
aValue->chars(), min(itsMaxLen, aValue->length()+1));
itsSSMPtr->setBucketDirty();
} else {
Int buf[3];
// Try to find out if this value was filled before, in that case we use
// an overwrite.
getRowValue(buf, aRowNr);
// if String <= 8 chars it is written into the data bucket
// instead of the string bucket.
if (aValue->length() <= 8) {
// if string was written before, but longer then 8 chars it has to
// be removed from the stringbucket
if (buf[2] > 8 ) {
itsSSMPtr->getStringHandler()->remove(buf[0], buf[1], buf[2]);
}
buf[2] = aValue->length();
putValueShortString (aRowNr, buf, *aValue);
} else {
// Maybe it was there earlier, but smaller.
if (buf[2] <= 8) {
buf[0] = 0;
buf[1] = 0;
buf[2] = 0;
}
itsSSMPtr->getStringHandler()->put (buf[0], buf[1], buf[2], *aValue);
putValue (aRowNr, buf);
}
}
}
void SSMColumn::putValue(rownr_t aRowNr, const void* aValue)
{
rownr_t aStartRow;
rownr_t anEndRow;
char* aDummy = itsSSMPtr->find (aRowNr, itsColNr, aStartRow, anEndRow,
columnName());
itsWriteFunc (aDummy+(aRowNr-aStartRow)*itsExternalSizeBytes,
aValue, itsNrCopy);
itsSSMPtr->setBucketDirty();
}
void SSMColumn::putValueShortString(rownr_t aRowNr, const void* aValue,
const String& string)
{
rownr_t aStartRow;
rownr_t anEndRow;
char* aDummy;
aDummy = itsSSMPtr->find (aRowNr, itsColNr, aStartRow, anEndRow,
columnName());
itsWriteFunc (aDummy+(aRowNr-aStartRow)*itsExternalSizeBytes,
aValue, itsNrCopy);
memcpy (aDummy+(aRowNr-aStartRow)*itsExternalSizeBytes, string.chars(),
string.length());
itsSSMPtr->setBucketDirty();
}
void SSMColumn::getScalarColumnV (ArrayBase& aDataPtr)
{
if (dtype() == TpString) {
Vector<String>& vec = static_cast<Vector<String>&>(aDataPtr);
for (uInt64 i=0; i<aDataPtr.nelements(); i++) {
getString (i, &(vec[i]));
}
} else {
Bool deleteIt;
void* anArray = aDataPtr.getVStorage(deleteIt);
getColumnValue(anArray, aDataPtr.nelements());
aDataPtr.putVStorage(anArray, deleteIt);
}
}
void SSMColumn::getColumnValue(void* anArray,rownr_t aNrRows)
{
char* aDataPtr = static_cast<char*>(anArray);
rownr_t aRowNr=0;
rownr_t rowsToDo = aNrRows;
while (rowsToDo > 0) {
rownr_t aStartRow;
rownr_t anEndRow;
char* aValue;
aValue = itsSSMPtr->find (aRowNr, itsColNr, aStartRow, anEndRow,
columnName());
aRowNr = anEndRow+1;
rownr_t aNr = anEndRow-aStartRow+1;
rowsToDo -= aNr;
itsReadFunc (aDataPtr, aValue, aNr * itsNrCopy);
aDataPtr += aNr * itsLocalSize;
}
}
void SSMColumn::putScalarColumnV (const ArrayBase& aDataPtr)
{
if (dtype() == TpString) {
const Vector<String>& vec = static_cast<const Vector<String>&>(aDataPtr);
for (uInt64 i=0 ; i<aDataPtr.nelements(); i++) {
putString (i, &(vec[i]));
}
} else {
Bool deleteIt;
const void* anArray = aDataPtr.getVStorage(deleteIt);
putColumnValue (anArray, aDataPtr.nelements());
aDataPtr.freeVStorage(anArray, deleteIt);
}
}
void SSMColumn::putColumnValue(const void* anArray,rownr_t aNrRows)
{
const char* aDataPtr = static_cast<const char*>(anArray);
rownr_t aRowNr=0;
rownr_t rowsToDo=aNrRows;
while (rowsToDo > 0) {
rownr_t aStartRow;
rownr_t anEndRow;
char* aValPtr;
aValPtr = itsSSMPtr->find (aRowNr, itsColNr, aStartRow, anEndRow,
columnName());
aRowNr = anEndRow+1;
rownr_t aNr = anEndRow-aStartRow+1;
rowsToDo -= aNr;
itsWriteFunc (aValPtr, aDataPtr, aNr * itsNrCopy);
aDataPtr += aNr * itsLocalSize;
itsSSMPtr->setBucketDirty();
}
// Be sure cache will be emptied
columnCache().invalidate();
}
void SSMColumn::removeColumn()
{
if (dataType() == TpString && itsMaxLen == 0) {
Int buf[3];
for (rownr_t i=0; i<itsSSMPtr->getNRow(); i++) {
getRowValue(buf, i);
if (buf[2] > 8 ) {
itsSSMPtr->getStringHandler()->remove(buf[0], buf[1], buf[2]);
}
}
}
}
void SSMColumn::init()
{
DataType aDT = static_cast<DataType>(dataType());
itsLocalSize = ValType::getTypeSize(aDT);
Bool asBigEndian = itsSSMPtr->asBigEndian();
itsNrCopy = itsNrElem;
if (aDT == TpString) {
// Fixed length strings are written directly.
if (itsMaxLen > 0) {
itsNrCopy = itsMaxLen;
itsLocalSize = itsNrCopy;
itsExternalSizeBytes = itsNrCopy;
itsReadFunc = itsWriteFunc = Conversion::valueCopy;
} else {
// Variable length strings are written indirectly.
// They have 3 Ints (bucketnr, offset, length) telling where
// the strings are.
itsNrCopy=1;
itsLocalSize = ValType::getTypeSize(TpInt);
itsExternalSizeBytes = ValType::getCanonicalSize (TpInt, asBigEndian);
uInt aNRel;
ValType::getCanonicalFunc (TpInt, itsReadFunc, itsWriteFunc, aNRel,
asBigEndian);
itsNrCopy *= aNRel;
itsExternalSizeBytes *= 3;
itsLocalSize *= 3;
itsNrCopy *= 3;
}
itsExternalSizeBits = 8*itsExternalSizeBytes;
} else if (aDT == TpBool) {
itsExternalSizeBytes = (itsNrElem + 7) / 8;
itsExternalSizeBits = itsNrElem;
itsReadFunc = &Conversion::bitToBool;
itsWriteFunc = &Conversion::boolToBit;
} else {
itsExternalSizeBytes = ValType::getCanonicalSize (aDT, asBigEndian);
uInt aNRel;
ValType::getCanonicalFunc (aDT, itsReadFunc, itsWriteFunc, aNRel,
asBigEndian);
itsNrCopy *= aNRel;
itsExternalSizeBytes *= itsNrElem;
itsLocalSize *= itsNrElem;
itsExternalSizeBits = 8*itsExternalSizeBytes;
}
}
void SSMColumn::resync (rownr_t)
{
// Invalidate the last value read.
columnCache().invalidate();
}
} //# NAMESPACE CASACORE - END
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