File: tVirtualTaQLColumn.cc

package info (click to toggle)
casacore 3.8.0-3
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 51,912 kB
  • sloc: cpp: 471,569; fortran: 16,372; ansic: 7,416; yacc: 4,714; lex: 2,346; sh: 1,865; python: 629; perl: 531; sed: 499; csh: 201; makefile: 32
file content (406 lines) | stat: -rw-r--r-- 13,585 bytes parent folder | download | duplicates (2)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
//# tVirtualTaQLColumn.cc: Test program for class VirtualTaQLColumn
//# Copyright (C) 2005
//# Associated Universities, Inc. Washington DC, USA.
//#
//# This program is free software; you can redistribute it and/or modify it
//# under the terms of the GNU General Public License as published by the Free
//# Software Foundation; either version 2 of the License, or (at your option)
//# any later version.
//#
//# This program is distributed in the hope that it will be useful, but WITHOUT
//# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
//# FITNESS FOR A PARTICULAR PURPOSE.  See the GNU General Public License for
//# more details.
//#
//# You should have received a copy of the GNU General Public License along
//# with this program; if not, write to the Free Software Foundation, Inc.,
//# 675 Massachusetts Ave, Cambridge, MA 02139, USA.
//#
//# Correspondence concerning AIPS++ should be addressed as follows:
//#        Internet email: casa-feedback@nrao.edu.
//#        Postal address: AIPS++ Project Office
//#                        National Radio Astronomy Observatory
//#                        520 Edgemont Road
//#                        Charlottesville, VA 22903-2475 USA

#include <casacore/casa/stdio.h>
#include <casacore/tables/Tables/TableDesc.h>
#include <casacore/tables/Tables/SetupNewTab.h>
#include <casacore/tables/Tables/Table.h>
#include <casacore/tables/Tables/TableIter.h>
#include <casacore/tables/Tables/TableRecord.h>
#include <casacore/tables/Tables/ScaColDesc.h>
#include <casacore/tables/Tables/ArrColDesc.h>
#include <casacore/tables/DataMan/VirtualTaQLColumn.h>
#include <casacore/tables/Tables/ArrayColumn.h>
#include <casacore/tables/Tables/ScalarColumn.h>
#include <casacore/tables/DataMan/StManAipsIO.h>
#include <casacore/tables/TaQL/TableParse.h>
#include <casacore/casa/Arrays/Vector.h>
#include <casacore/casa/Arrays/Cube.h>
#include <casacore/casa/Arrays/IPosition.h>
#include <casacore/casa/Arrays/ArrayMath.h>
#include <casacore/casa/Arrays/ArrayLogical.h>
#include <casacore/casa/Arrays/Slicer.h>
#include <casacore/casa/Arrays/Slice.h>
#include <casacore/casa/OS/PrecTimer.h>
#include <casacore/tables/Tables/TableError.h>
#include <casacore/casa/iostream.h>

#include <casacore/casa/namespace.h>

// <summary> Test program for class VirtualTaQLColumn </summary>

// This program tests the virtual column engine VirtualTaQLColumn.
// The results are written to stdout. The script executing this program,
// compares the results with the reference output file.

TableDesc makeDesc();
void a (const TableDesc&);
void check(const Table& table, Bool showname);
void testSelect();
void testPerf();

int main ()
{
    try {
      {
	TableDesc td = makeDesc();
	a (td);
	Table table("tVirtualTaQLColumn_tmp.data0");
	check(table, True);
	table.deepCopy ("tVirtualTaQLColumn_tmp.data1", Table::New, True);
	check (Table("tVirtualTaQLColumn_tmp.data1"), True);
	Table tab2 = table.copyToMemoryTable ("tVirtualTaQLColumn_tmp.data2");
	check (tab2, True);
      }
      testSelect();
      testPerf();
    } catch (std::exception& x) {
	cout << "Caught an exception: " << x.what() << endl;
	return 1;
    } 
    return 0;                           // exit with success status
}

// First build a description.
TableDesc makeDesc()
{
    // First register the virtual column engine.
    VirtualTaQLColumn::registerClass();

    // Build the table description.
    TableDesc td("tTableDesc","1",TableDesc::Scratch);
    td.comment() = "A test of class tVirtualTaQLColumn";
    td.addColumn (ScalarColumnDesc<Int>("ab","Comment for column ab"));
    td.addColumn (ScalarColumnDesc<Int>("ac"));
    td.addColumn (ScalarColumnDesc<uInt>("ad","comment for ad"));
    td.addColumn (ScalarColumnDesc<float>("ae"));
    td.addColumn (ScalarColumnDesc<String>("af"));
    td.addColumn (ScalarColumnDesc<DComplex>("ag"));
    td.addColumn (ScalarColumnDesc<Int>("acalcc"));
    td.addColumn (ScalarColumnDesc<float>("acalc"));
    td.addColumn (ScalarColumnDesc<Complex>("acalc2"));
    td.addColumn (ScalarColumnDesc<short>("acalc3"));
    ScalarColumnDesc<String> acalcaf("acalcaf");
    acalcaf.setMaxLength (4);
    td.addColumn (acalcaf);
    td.addColumn (ArrayColumnDesc<float>("arr1",3,ColumnDesc::Direct));
    td.addColumn (ArrayColumnDesc<float>("arr2",0));
    td.addColumn (ArrayColumnDesc<float>("arr3",0,ColumnDesc::Direct));
    td.addColumn (ArrayColumnDesc<float>("arrcalc",0));
    td.addColumn (ArrayColumnDesc<uInt>("arrcalcc",IPosition(1,3)));
    return td;
}

void a (const TableDesc& td)
{
    // Now create a new table from the description.
    SetupNewTable newtab("tVirtualTaQLColumn_tmp.data0", td, Table::New);
    newtab.setShapeColumn("arr1",IPosition(3,2,3,4));
    newtab.setShapeColumn("arr3",IPosition(3,2,3,4));
    VirtualTaQLColumn vtcc("10");
    VirtualTaQLColumn vtc("ab+10.");
    VirtualTaQLColumn vtc2("ag+max(arr3)");
    VirtualTaQLColumn vtc3("ab*ac");
    VirtualTaQLColumn vtcaf("af + '1234'"); 
    VirtualTaQLColumn vtac("ab*arr3");
    VirtualTaQLColumn vtacc("[1,2,3]");
    newtab.bindColumn ("acalcc", vtcc);
    newtab.bindColumn ("acalc", vtc);
    newtab.bindColumn ("acalc2", vtc2);
    newtab.bindColumn ("acalc3", vtc3);
    newtab.bindColumn ("acalcaf", vtcaf);
    newtab.bindColumn ("arrcalc", vtac);
    newtab.bindColumn ("arrcalcc", vtacc);
    Table tab(newtab, 10);

    ScalarColumn<Int> ab1(tab,"ab");
    ScalarColumn<Int> ab2(tab,"ab");
    ScalarColumn<Int> ac (tab,"ac");
    ScalarColumn<uInt> ad(tab,"ad");
    ScalarColumn<float> ae(tab,"ae");
    ScalarColumn<String> af(tab,"af");
    TableColumn ag1(tab,"ag");
    ScalarColumn<DComplex> ag(tab,"ag");
    ArrayColumn<float> arr1(tab,"arr1");
    ArrayColumn<float> arr2(tab,"arr2");
    ArrayColumn<float> arr3(tab,"arr3");
    Cube<float> arrf(IPosition(3,2,3,4));
    uInt i;
    char str[8];
    indgen (arrf);
    for (i=0; i<10; i++) {
	ab1.put (i, i);
	ac.put (i, i+1);
	ad.put (i, i+2);
	ae.put (i, i+3);
	snprintf (str, sizeof(str), "V%i_", i);
	af.put (i, str);
	arr1.put(i,arrf);
	arr2.put(i,arrf);
	arr3.put(i,arrf);
	arrf += (float)(arrf.nelements());
    }
    ag1.putColumn (ad);
    VirtualTaQLColumn vtcm("acalc+acalc3+mean(arrcalc)");
    tab.addColumn (ScalarColumnDesc<Float>("acalc4"), vtcm);
}

void check(const Table& tab, Bool showname)
{
    if (!showname) cout << ">>>" << endl;
    cout << "Checking table " << tab.tableName() << endl;
    if (!showname) cout << "<<<" << endl;
    ScalarColumn<Int> ab2(tab,"ab");
    ScalarColumn<Int> ac (tab,"ac");
    ScalarColumn<uInt> ad(tab,"ad");
    ScalarColumn<float> ae(tab,"ae");
    ScalarColumn<String> af(tab,"af");
    ScalarColumn<DComplex> ag(tab,"ag");
    ScalarColumn<Int> acalcc(tab,"acalcc");
    ScalarColumn<float> acalc(tab,"acalc");
    ScalarColumn<Complex> acalc2(tab,"acalc2");
    ScalarColumn<short> acalc3(tab,"acalc3");
    ScalarColumn<float> acalc4(tab,"acalc4");
    ScalarColumn<String> acalcaf(tab,"acalcaf");
    ArrayColumn<float> arr1(tab,"arr1");
    ArrayColumn<float> arr2(tab,"arr2");
    ArrayColumn<float> arr3(tab,"arr3");
    ArrayColumn<float> arrcalc(tab,"arrcalc");
    ArrayColumn<uInt> arrcalcc(tab,"arrcalcc");
    Int i;
    Short acalc3val;
    Int abval, acval;
    uInt adval;
    float aeval, acalcval, acalc4val;
    Int acalccval;
    String afval, acalcafval;
    DComplex agval;
    Complex acalc2val;
    char str[8];
    Cube<float> arrf(IPosition(3,2,3,4));
    Cube<float> arrval(IPosition(3,2,3,4));
    Cube<float> arrvalslice(arrval(Slice(0,1),Slice(0,1,2),Slice(0,2,2)));
    Vector<uInt> arrcexp(3);
    indgen (arrcexp, 1u);
    Slice tmp;
    Slicer nslice (tmp, tmp, tmp,  Slicer::endIsLength);
    Slicer nslice2(Slice(0,1), Slice(0,1,2), Slice(0,2,2),
		   Slicer::endIsLength);
    indgen (arrf);
    for (i=0; i<10; i++) {
	ab2.get (i, abval);
	ac.get (i, acval);
	ad.get (i, adval);
	ae.get (i, aeval);
	af.get (i, afval);
	ag.get (i, agval);
	acalcc.get (i, acalccval);
	acalc.get (i, acalcval);
	acalc2.get (i, acalc2val);
	acalc3.get (i, acalc3val);
	acalc4.get (i, acalc4val);
	acalcaf.get (i, acalcafval);
	snprintf (str, sizeof(str), "V%i_", i);
	if (abval != i  ||  acval != i+1
        ||  Int(adval) != i+2  ||  aeval != i+3
	||  afval != str  ||  agval != DComplex(i+2)
        ||  acalccval != 10  ||  acalcafval != (afval+"1234").substr(0,4)
	||  acalcval != abval+10  ||  acalc3val != abval*acval) {
	    cout << "error in row " << i << ": " << abval
		 << ", " << acval << ", " << adval
		 << ", " << aeval << ", " << afval
		 << ", " << agval << ", " << acalcval
		 << ", " << acalc3val << endl;
	}
	if (!allEQ (arrcalcc(i), arrcexp)) {
	    cout << "error in arrcalcc in row " << i << endl;
	}
	arr1.get (i, arrval);
	if (!allEQ (arrval, arrf)) {
	    cout << "error in arr1 in row " << i << endl;
	}
	arr2.get (i, arrval);
	if (!allEQ (arrval, arrf)) {
	    cout << "error in arr2 in row " << i << endl;
	}
	arr3.get (i, arrval);
	if (!allEQ (arrval, arrf)) {
	    cout << "error in arr3 in row " << i << endl;
	}
	if (acalc2val != Complex(agval) + max(arrval)) {
	  cout << "error in acalc2val in row " << i << ": "
	       << acalc2val << endl;
	}
	arrcalc.get (i, arrval);
	if (!allEQ (arrval, float(abval)*arrf)) {
	    cout << "error in arrcalc in row " << i << endl;
	}
	if (acalc4val != acalcval + acalc3val + mean(arrval)) {
	  cout << "error in acalc4val in row " << i << ": "
	       << acalc4val << endl;
	}
	arr2.getSlice (i, nslice, arrval);
	if (!allEQ (arrval, arrf)) {
	    cout << "error in arr2 (entire slice) in row " << i << endl;
	}
	arr2.getSlice (i, nslice2, arrvalslice);
	if (!allEQ (arrval, arrf)) {
	    cout << "error in arr2 (partial slice) in row " << i << endl;
	}
	arrf += (float)(arrf.nelements());
    }
    Vector<Int> abvec = ab2.getColumn();
    for (i=0; i<10; i++) {
	if (abvec(i) != i) {
	    cout << "error in ab getColumn " << i << ": " << abvec(i) << endl;
	}
    }
    Vector<Short> acalc3vec = acalc3.getColumn();
    for (i=0; i<10; i++) {
	if (acalc3vec(i) != i*(i+1)) {
	    cout << "error in acalc3 getColumn " << i << ": "
		 << acalc3vec(i) << endl;
	}
    }
    Array<float> arr1a = arr1.getColumn();
    if (arr1a.ndim() != 4) {
	cout << "arr1a not 4-dim" << endl;
    }
    i=0;
    uInt j0,j1,j2,j3;
    for (j3=0; j3<10; j3++)
	for (j2=0; j2<4; j2++)
	    for (j1=0; j1<3; j1++)
		for (j0=0; j0<2; j0++) {
		    if (arr1a(IPosition(4,j0,j1,j2,j3)) != i++) {
			cout <<"arr1a error at " <<j0<<" "<<j1<<" "<<j2<<" "
			    <<j3<<" should be: "<<i<<endl;
		    }
		}
    Array<float> arr1b = arr1.getColumn(nslice);
    if (arr1b.ndim() != 4) {
	cout << "arr1b not 4-dim" << endl;
    }
    i=0;
    for (j3=0; j3<10; j3++)
	for (j2=0; j2<4; j2++)
	    for (j1=0; j1<3; j1++)
		for (j0=0; j0<2; j0++) {
		    if (arr1b(IPosition(4,j0,j1,j2,j3)) != i++) {
			cout <<"arr1b error at " <<j0<<" "<<j1<<" "<<j2<<" "
			    <<j3<<" should be: "<<i<<endl;
		    }
		}

    {
      Int i = 0;
      TableIterator iter (tab, "ad", TableIterator::Descending);
      while (! iter.pastEnd()) {
	if (iter.table().nrow() != 1) {
	    cout << "More than 1 row in ad TableIterator " << i << endl;
	}
	ScalarColumn<Int> ab (iter.table(), "ab");
	if (ab(0) != 9-i) {
	    cout << "Invalid value " << ab(0) << " in ad TableIterator "
		 << i << endl;
	}
	iter.next();
	i++;
      }
    }
    {
      Int i = 0;
      TableIterator iter (tab, "acalc", TableIterator::Descending);
      while (! iter.pastEnd()) {
	if (iter.table().nrow() != 1) {
	    cout << "More than 1 row in acalc TableIterator " << i << endl;
	}
	ScalarColumn<Int> ab (iter.table(), "ab");
	if (ab(0) != 9-i) {
	    cout << "Invalid value " << ab(0) << " in acalc TableIterator "
		 << i << endl;
	}
	iter.next();
	i++;
      }
    }
}

// Test if a tableCommand on a table containing a TaQL column works fine.
// Note it requires recursive parsing.
void testSelect()
{
  // Select all rows.
  Table subset = tableCommand("select from tVirtualTaQLColumn_tmp.data0 "
			      "where acalc > -1000").table();
  check (subset, False);
}

// Test how getting a column performs.
void testPerf()
{
  {
    TableDesc td;
    td.addColumn (ScalarColumnDesc<Int>("sca"));
    td.addColumn (ScalarColumnDesc<uInt>("row"));
    td.addColumn (ArrayColumnDesc<Float>("arr"));
    SetupNewTable newtab("tVirtualTaQLColumn_tmp.dataperf", td, Table::New);
    VirtualTaQLColumn sca("0");
    VirtualTaQLColumn row("rownumber()", "python");   // python -> 0-based
    VirtualTaQLColumn arr("[1.,2,3,4]");
    newtab.bindColumn ("sca", sca);
    newtab.bindColumn ("row", row);
    newtab.bindColumn ("arr", arr);
    Table tab(newtab, 1000000);
  }
  {
    Table tab("tVirtualTaQLColumn_tmp.dataperf");
    ScalarColumn<Int> scacol(tab, "sca");
    ScalarColumn<uInt> rowcol(tab, "row");
    ArrayColumn<Float> arrcol(tab, "arr");
    PrecTimer timer;
    timer.start();
    Vector<Int> vec(scacol.getColumn());
    timer.stop();
    timer.show (cout, "scacol");
    timer.reset();
    timer.start();
    Vector<uInt> vec2(rowcol.getColumn());
    timer.stop();
    timer.show (cout, "rowcol");
    timer.reset();
    timer.start();
    Array<Float> arr(arrcol.getColumn());
    timer.stop();
    timer.show (cout, "arrcol");
    AlwaysAssertExit (vec.size() == tab.nrow());
    AlwaysAssertExit (allEQ (vec, 0));
    AlwaysAssertExit (vec2.size() == tab.nrow());
    for (size_t i=0; i<vec2.size(); ++i) {
      AlwaysAssertExit (vec2[i] == i);    // rownumber is 1-based
    }
    AlwaysAssertExit (arr.shape() == IPosition(2,4,tab.nrow()));
  }
}